Citrus Sinensis ID: 048150

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140------
Protein Sequence
KYNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHccccccccEEcccccccEEEEEEEEcccccccEEEcccccccccccHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccEcHHHHHHHHccccHHcccccccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHEcccccEEEEEEEcccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
kynvvaeqnadndittLESLQFDFETIEDatnkfstdnklgeggfgvlpneHEIAVKRlsrsssqgaqEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYeyvpnkrldnflyepekqgqwdcsrrykiiggrgrdcsrnflfs
Flexible Loop (DISEMBL)
kynvvaeqnadndittleSLQFDFETIEDATNKFSTDNKLGEGGFGVLPNEHEIAVKRLsrsssqgaqEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNflyepekqgqwdcSRRYKiiggrgrdcsrnflfs
Low Complexity Region (SEG)
KYNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS
Disordered region (IsUnstruct)
***************TLESLQFDFETIED*************GGFGVL*********************INNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR*****
Disordered Region (DISOPRED)
*******************LQFDFETIEDATNKFSTDNKLGEGGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS
Disordered Region (DISEMBL)
KYNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS
Disordered Region (DISPRO)
*****************ESLQFDFETIEDATNKFSTDNKLGEGGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
KYNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	146	2.2.26 [Sep-21-2011]
Q9ZP16	667	Cysteine-rich receptor-li	yes	no	0.876	0.191	0.646	3e-43
Q9LDM5	666	Putative cysteine-rich re	no	no	0.883	0.193	0.641	6e-43
Q9LDS6	656	Putative cysteine-rich re	no	no	0.869	0.193	0.621	7e-43
Q9LDQ3	669	Putative cysteine-rich re	no	no	0.897	0.195	0.625	2e-42
Q9C5S8	659	Cysteine-rich receptor-li	no	no	0.869	0.192	0.651	6e-42
Q8GYA4	669	Cysteine-rich receptor-li	no	no	0.876	0.191	0.624	2e-41
O65472	690	Putative cysteine-rich re	no	no	0.849	0.179	0.651	2e-41
Q8H199	658	Cysteine-rich receptor-li	no	no	0.883	0.196	0.644	2e-41
Q9LZU4	676	Cysteine-rich receptor-li	no	no	0.869	0.187	0.621	3e-41
O65479	666	Putative cysteine-rich re	no	no	0.904	0.198	0.627	5e-41

>sp|Q9ZP16|CRK11_ARATH Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2

 Score =  173 bits (439), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 86/133 (64%), Positives = 104/133 (78%), Gaps = 5/133 (3%)

Query: 10  ADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGV-----LPNEHEIAVKRLSRSSS 64
           +++DI+T +SL +DF+TIE ATNKFST NKLGEGGFG      L N  ++AVKRLS+ S 
Sbjct: 326 SESDISTTDSLVYDFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRLSKKSG 385

Query: 65  QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWD 124
           QG +E  NE V+V KLQH NLVRLLGFCLEREE+IL+YE+V NK LD FL++PEKQ Q D
Sbjct: 386 QGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQSQLD 445

Query: 125 CSRRYKIIGGRGR 137
            +RRYKIIGG  R
Sbjct: 446 WTRRYKIIGGIAR 458

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q9LDM5|CRK31_ARATH Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=3 SV=1

 Score =  172 bits (436), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 86/134 (64%), Positives = 105/134 (78%), Gaps = 5/134 (3%)

Query: 9   NADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSS 63
           + D+D+T+ +SLQFDF TIE AT+ FS +NKLG+GGFG     +LPNE EIAVKRLS +S
Sbjct: 314 HTDDDMTSPQSLQFDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLSSNS 373

Query: 64  SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQW 123
            QG QE  NEVV+VAKLQH NLVRLLGFC+ER+E+ILVYE+V NK LD FL++P+ + Q 
Sbjct: 374 GQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLFDPKMKSQL 433

Query: 124 DCSRRYKIIGGRGR 137
           D  RRY IIGG  R
Sbjct: 434 DWKRRYNIIGGVTR 447

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LDS6|CRK32_ARATH Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=3 SV=1

 Score =  172 bits (436), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 87/140 (62%), Positives = 106/140 (75%), Gaps = 13/140 (9%)

Query: 11  DNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSSSQ 65
           D+D+T+ +SLQFDF T+E AT+KFS +NKLG+GGFG     +LPNE E+AVKRLS +S Q
Sbjct: 298 DDDMTSPQSLQFDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLSSNSGQ 357

Query: 66  GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY--------EP 117
           G QE  NEVV+VAKLQH NLVRLLGFCLER+E+ILVYE+VPNK L+ FL+        +P
Sbjct: 358 GTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDP 417

Query: 118 EKQGQWDCSRRYKIIGGRGR 137
            K+ Q D  RRY IIGG  R
Sbjct: 418 TKKSQLDWKRRYNIIGGITR 437

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LDQ3|CRK35_ARATH Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=3

 Score =  171 bits (432), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 85/136 (62%), Positives = 102/136 (75%), Gaps = 5/136 (3%)

Query: 7   EQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSR 61
           E  A ++ITT  SLQF F+TIE AT+KFS  N +G GGFG      L +  E+AVKRLS+
Sbjct: 318 EVQATDEITTTHSLQFSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSK 377

Query: 62  SSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQG 121
           +S QGA+E  NE V+V+KLQH NLVRLLGFCLE EEKILVYE+VPNK LD FL++P KQG
Sbjct: 378 TSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQG 437

Query: 122 QWDCSRRYKIIGGRGR 137
           + D +RRY IIGG  R
Sbjct: 438 ELDWTRRYNIIGGIAR 453

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9C5S8|CRK5_ARATH Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1

 Score =  169 bits (427), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 86/132 (65%), Positives = 101/132 (76%), Gaps = 5/132 (3%)

Query: 11  DNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSSSQ 65
           ++DITT  SLQFDF+ IE AT+KFS  NKLG+GGFG      LPN  ++AVKRLS++S Q
Sbjct: 317 EDDITTAGSLQFDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLSKTSGQ 376

Query: 66  GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDC 125
           G +E  NEVVVVAKLQH NLV+LLGFCLEREEKILVYE+V NK LD FL++   Q Q D 
Sbjct: 377 GEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQLDW 436

Query: 126 SRRYKIIGGRGR 137
           + RYKIIGG  R
Sbjct: 437 TTRYKIIGGIAR 448

Involved in multiple distinct defense responses. May function as a disease resistance (R) protein.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3

 Score =  167 bits (424), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/133 (62%), Positives = 101/133 (75%), Gaps = 5/133 (3%)

Query: 10  ADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSSS 64
           A +DITT +SLQ D+ TI+ AT+ F   NK+G+GGFG      L +  E+AVKRLS+SS 
Sbjct: 324 AGDDITTADSLQLDYRTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSG 383

Query: 65  QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWD 124
           QG  E  NEVV+VAKLQH NLVRLLGFCL+ EE++LVYEYVPNK LD FL++P K+GQ D
Sbjct: 384 QGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLD 443

Query: 125 CSRRYKIIGGRGR 137
            +RRYKIIGG  R
Sbjct: 444 WTRRYKIIGGVAR 456

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65472|CRK12_ARATH Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=3 SV=2

 Score =  167 bits (424), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 84/129 (65%), Positives = 98/129 (75%), Gaps = 5/129 (3%)

Query: 14  ITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSSSQGAQ 68
           ITTL   Q DF+TIE AT  F+  NKLG+GGFG      L N  E+AVKRLS++S QGAQ
Sbjct: 347 ITTLHFQQLDFKTIEVATENFAKTNKLGQGGFGEVYKGTLVNGTEVAVKRLSKTSEQGAQ 406

Query: 69  EINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRR 128
           E  NEVV+VAKLQH NLV+LLG+CLE EEKILVYE+VPNK LD FL++P KQGQ D ++R
Sbjct: 407 EFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKR 466

Query: 129 YKIIGGRGR 137
           Y IIGG  R
Sbjct: 467 YNIIGGITR 475

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8H199|CRK14_ARATH Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2

 Score =  167 bits (423), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 101/135 (74%), Gaps = 6/135 (4%)

Query: 8   QNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRS 62
           Q +  DIT   SLQFDF+ IEDATNKFS  N +G GGFG     VL N  E+A+KRLS++
Sbjct: 311 QGSSTDITITHSLQFDFKAIEDATNKFSESNIIGRGGFGEVFMGVL-NGTEVAIKRLSKA 369

Query: 63  SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQ 122
           S QGA+E  NEVVVVAKL H NLV+LLGFCLE EEKILVYE+VPNK LD FL++P KQGQ
Sbjct: 370 SRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFDPTKQGQ 429

Query: 123 WDCSRRYKIIGGRGR 137
            D ++RY II G  R
Sbjct: 430 LDWTKRYNIIRGITR 444

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LZU4|CRK4_ARATH Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1

 Score =  166 bits (421), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/132 (62%), Positives = 100/132 (75%), Gaps = 5/132 (3%)

Query: 11  DNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSSSQ 65
            +DITT  SLQFDF+ IE ATNKF   NKLG+GGFG     + P+  ++AVKRLS++S Q
Sbjct: 328 SDDITTAGSLQFDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQ 387

Query: 66  GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDC 125
           G +E  NEV+VVAKLQH NLVRLLGFCLER+E+ILVYE+VPNK LD F+++   Q   D 
Sbjct: 388 GEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDW 447

Query: 126 SRRYKIIGGRGR 137
           +RRYKIIGG  R
Sbjct: 448 TRRYKIIGGIAR 459

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65479|CRK20_ARATH Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2

 Score =  166 bits (420), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 86/137 (62%), Positives = 101/137 (73%), Gaps = 5/137 (3%)

Query: 6   AEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLS 60
           AE    +DITT  SLQFDF+ I  AT+ F   NKLG+GGFG       P+  ++AVKRLS
Sbjct: 316 AETTDGDDITTAGSLQFDFKAIVAATDIFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLS 375

Query: 61  RSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           ++S QG +E  NEVVVVAKLQH NLV+LLG+CLE EEKILVYE+VPNK LD FL++P  Q
Sbjct: 376 KNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQ 435

Query: 121 GQWDCSRRYKIIGGRGR 137
           GQ D SRRYKIIGG  R
Sbjct: 436 GQLDWSRRYKIIGGIAR 452

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
359496581	666	PREDICTED: cysteine-rich receptor-like p	0.938	0.205	0.697	4e-48
296088180	699	unnamed protein product [Vitis vinifera]	0.938	0.195	0.697	5e-48
255555033	579	ATP binding protein, putative [Ricinus c	0.938	0.236	0.704	7e-48
147821544	655	hypothetical protein VITISV_034184 [Viti	0.938	0.209	0.683	1e-47
359484134	665	PREDICTED: cysteine-rich receptor-like p	0.938	0.206	0.690	3e-47
297742701	792	unnamed protein product [Vitis vinifera]	0.931	0.171	0.687	1e-46
359475759	739	PREDICTED: cysteine-rich receptor-like p	0.931	0.184	0.676	5e-46
224113935	674	predicted protein [Populus trichocarpa]	0.924	0.200	0.664	4e-45
255555035	671	ATP binding protein, putative [Ricinus c	0.924	0.201	0.683	4e-45
224076504	671	predicted protein [Populus trichocarpa]	0.910	0.198	0.688	8e-45

>gi|359496581|ref|XP_002270035.2| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Vitis vinifera]

 Score =  196 bits (497), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 99/142 (69%), Positives = 113/142 (79%), Gaps = 5/142 (3%)

Query: 1   KYNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIA 55
           KY+   E+  +NDITT++SLQFDF T+E ATN FS DNK+GEGGFG      L +  EIA
Sbjct: 308 KYSSTEEEKVENDITTVQSLQFDFGTLEAATNNFSDDNKIGEGGFGDVYKGTLSSGKEIA 367

Query: 56  VKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
           +KRLSRSS+QGA E  NEVV+VAKLQH NLVRLLGFCLE EEKILVYEYVPNK LD FL+
Sbjct: 368 IKRLSRSSAQGAVEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEYVPNKSLDCFLF 427

Query: 116 EPEKQGQWDCSRRYKIIGGRGR 137
           +P+KQGQ D SRRYKIIGG  R
Sbjct: 428 DPDKQGQLDWSRRYKIIGGIAR 449

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088180|emb|CBI35672.3| unnamed protein product [Vitis vinifera]

 Score =  195 bits (496), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 99/142 (69%), Positives = 113/142 (79%), Gaps = 5/142 (3%)

Query: 1   KYNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIA 55
           KY+   E+  +NDITT++SLQFDF T+E ATN FS DNK+GEGGFG      L +  EIA
Sbjct: 341 KYSSTEEEKVENDITTVQSLQFDFGTLEAATNNFSDDNKIGEGGFGDVYKGTLSSGKEIA 400

Query: 56  VKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
           +KRLSRSS+QGA E  NEVV+VAKLQH NLVRLLGFCLE EEKILVYEYVPNK LD FL+
Sbjct: 401 IKRLSRSSAQGAVEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEYVPNKSLDCFLF 460

Query: 116 EPEKQGQWDCSRRYKIIGGRGR 137
           +P+KQGQ D SRRYKIIGG  R
Sbjct: 461 DPDKQGQLDWSRRYKIIGGIAR 482

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555033|ref|XP_002518554.1| ATP binding protein, putative [Ricinus communis] gi|223542399|gb|EEF43941.1| ATP binding protein, putative [Ricinus communis]

 Score =  194 bits (494), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 100/142 (70%), Positives = 109/142 (76%), Gaps = 5/142 (3%)

Query: 1   KYNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIA 55
           KY  V E +A N+ITT ESLQ D  TIE ATNKFS DNKLGEGGFG      LPN  EIA
Sbjct: 316 KYEAVQEDDARNEITTAESLQIDLNTIEVATNKFSADNKLGEGGFGEVYKGTLPNGQEIA 375

Query: 56  VKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
           VK+LSRSS QGA+E  NEV ++AKLQH NLVRLLGFCLE  EKILVYE+VPNK LD FL+
Sbjct: 376 VKKLSRSSGQGAEEFKNEVALLAKLQHRNLVRLLGFCLEGAEKILVYEFVPNKSLDYFLF 435

Query: 116 EPEKQGQWDCSRRYKIIGGRGR 137
           +PEKQ Q D SRRYKIIGG  R
Sbjct: 436 DPEKQAQLDWSRRYKIIGGIAR 457

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147821544|emb|CAN72253.1| hypothetical protein VITISV_034184 [Vitis vinifera]

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 97/142 (68%), Positives = 112/142 (78%), Gaps = 5/142 (3%)

Query: 1   KYNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIA 55
           KYN   E+N +NDITT++SLQFDF T++ ATN FS DNK+G+GGFG      L +  EIA
Sbjct: 296 KYNTTEEENVENDITTVQSLQFDFGTLQAATNNFSDDNKIGQGGFGDVYKVTLSSGQEIA 355

Query: 56  VKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
           +KRLSRSS QGA E  NE+V+VAKLQH NLVRLLGFCLE EEKILVYEYVPNK LD FL+
Sbjct: 356 IKRLSRSSVQGAVEFKNEIVLVAKLQHRNLVRLLGFCLEGEEKILVYEYVPNKSLDCFLF 415

Query: 116 EPEKQGQWDCSRRYKIIGGRGR 137
           +P+KQGQ D SRRY IIGG  R
Sbjct: 416 DPDKQGQLDWSRRYMIIGGIAR 437

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359484134|ref|XP_002269330.2| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Vitis vinifera]

 Score =  192 bits (489), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 98/142 (69%), Positives = 112/142 (78%), Gaps = 5/142 (3%)

Query: 1   KYNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIA 55
           KYN   E+  +NDITT++SLQFDF T+E  TN FS DNK+GEGGFG      L +  EIA
Sbjct: 306 KYNSTEEEKVENDITTVQSLQFDFGTLEATTNNFSDDNKIGEGGFGDVYKGTLSSGKEIA 365

Query: 56  VKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
           +KRLSRSS+QGA E  NEVV+VAKLQH NLVRLLGFCLE EEKILVYEYVPNK LD+FL+
Sbjct: 366 IKRLSRSSAQGAVEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEYVPNKSLDHFLF 425

Query: 116 EPEKQGQWDCSRRYKIIGGRGR 137
           +P+KQGQ D SRRYKIIG   R
Sbjct: 426 DPDKQGQLDWSRRYKIIGRIAR 447

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742701|emb|CBI35335.3| unnamed protein product [Vitis vinifera]

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 97/141 (68%), Positives = 111/141 (78%), Gaps = 5/141 (3%)

Query: 2   YNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAV 56
           YN   E+  +NDITT++SLQFDF T+E  TN FS DNK+GEGGFG      L +  EIA+
Sbjct: 309 YNSTEEEKVENDITTVQSLQFDFGTLEATTNNFSDDNKIGEGGFGDVYKGTLSSGKEIAI 368

Query: 57  KRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
           KRLSRSS+QGA E  NEVV+VAKLQH NLVRLLGFCLE EEKILVYEYVPNK LD+FL++
Sbjct: 369 KRLSRSSAQGAVEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEYVPNKSLDHFLFD 428

Query: 117 PEKQGQWDCSRRYKIIGGRGR 137
           P+KQGQ D SRRYKIIG   R
Sbjct: 429 PDKQGQLDWSRRYKIIGRIAR 449

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475759|ref|XP_002269246.2| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Vitis vinifera]

 Score =  188 bits (478), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 96/142 (67%), Positives = 112/142 (78%), Gaps = 6/142 (4%)

Query: 1   KYNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIA 55
           KYN   E+N +NDITT++SLQFDF T++ ATN FS DNK+G+GGFG      L +  EIA
Sbjct: 381 KYNT-EEENVENDITTVQSLQFDFGTLQAATNNFSDDNKIGQGGFGDVYKGTLSSGQEIA 439

Query: 56  VKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
           +KRLSRSS QGA E  NE+V+VAKLQH NLVRLLGFCLE EEKILVYEYVPNK LD F++
Sbjct: 440 IKRLSRSSVQGAVEFKNEIVLVAKLQHRNLVRLLGFCLEGEEKILVYEYVPNKSLDCFVF 499

Query: 116 EPEKQGQWDCSRRYKIIGGRGR 137
           +P+KQGQ D SRRY IIGG  R
Sbjct: 500 DPDKQGQLDWSRRYNIIGGIAR 521

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113935|ref|XP_002316618.1| predicted protein [Populus trichocarpa] gi|222859683|gb|EEE97230.1| predicted protein [Populus trichocarpa]

 Score =  186 bits (471), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 93/140 (66%), Positives = 106/140 (75%), Gaps = 5/140 (3%)

Query: 3   NVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVK 57
           N   E +  N+IT +ESLQFD  +I+DATN FS DNKLGEGGFG      LPN   IAVK
Sbjct: 316 NSAQENDVGNEITNVESLQFDLSSIQDATNHFSADNKLGEGGFGEVYKGTLPNGQAIAVK 375

Query: 58  RLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEP 117
           RLS+ S QGA E  NEV++VAKLQH NLVRLLGFCLE EEKILVYE+VPNK LD F+++P
Sbjct: 376 RLSKGSGQGAAEFKNEVILVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFVFDP 435

Query: 118 EKQGQWDCSRRYKIIGGRGR 137
           EKQG  D S+RYKIIGG  R
Sbjct: 436 EKQGLLDWSKRYKIIGGIAR 455

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555035|ref|XP_002518555.1| ATP binding protein, putative [Ricinus communis] gi|223542400|gb|EEF43942.1| ATP binding protein, putative [Ricinus communis]

 Score =  186 bits (471), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/142 (68%), Positives = 109/142 (76%), Gaps = 7/142 (4%)

Query: 1   KYNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIA 55
           KY+ V E    N+ITT+ESLQ D  T+E ATNKFS DNKLGEGGFG     +LPN  EIA
Sbjct: 314 KYDAVQEDG--NEITTVESLQIDLNTVEAATNKFSADNKLGEGGFGEVYKGILPNGQEIA 371

Query: 56  VKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
           VK+LSRSS QGAQE  NEVV++AKLQH NLVRLLGFCLE  EKILVYE+V NK LD FL+
Sbjct: 372 VKKLSRSSGQGAQEFKNEVVLLAKLQHRNLVRLLGFCLEGAEKILVYEFVSNKSLDYFLF 431

Query: 116 EPEKQGQWDCSRRYKIIGGRGR 137
           +PEKQ Q D S RYKI+GG  R
Sbjct: 432 DPEKQRQLDWSTRYKIVGGIAR 453

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224076504|ref|XP_002304953.1| predicted protein [Populus trichocarpa] gi|222847917|gb|EEE85464.1| predicted protein [Populus trichocarpa]

 Score =  184 bits (468), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 95/138 (68%), Positives = 106/138 (76%), Gaps = 5/138 (3%)

Query: 5   VAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRL 59
           V E +  ++ITT ESLQFD  TIE ATN FS DNKLGEGGFG      LPN  +IAVKRL
Sbjct: 314 VPENDVGDEITTEESLQFDLSTIEAATNNFSADNKLGEGGFGEVYKGTLPNGQQIAVKRL 373

Query: 60  SRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK 119
           SR+S QGA E  NEVV+VAKLQH NLVR+ GFCLEREEKILVYE+V NK LD FL++PE+
Sbjct: 374 SRNSGQGAAEFKNEVVLVAKLQHRNLVRVQGFCLEREEKILVYEFVSNKSLDYFLFDPER 433

Query: 120 QGQWDCSRRYKIIGGRGR 137
           QG  D SRRYKIIGG  R
Sbjct: 434 QGLLDWSRRYKIIGGIAR 451

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
TAIR|locus:2121691	667	CRK11 "cysteine-rich RLK (RECE	0.876	0.191	0.646	6.5e-40
TAIR|locus:2123126	666	CRK31 "cysteine-rich RLK (RECE	0.863	0.189	0.648	2.4e-39
TAIR|locus:2123111	669	CRK34 "cysteine-rich RLK (RECE	0.897	0.195	0.625	5.3e-38
TAIR|locus:2123056	656	CRK32 "cysteine-rich RLK (RECE	0.849	0.189	0.627	7.9e-38
TAIR|locus:2121676	669	CRK10 "cysteine-rich RLK (RECE	0.876	0.191	0.624	1.2e-37
TAIR|locus:2077147	676	CRK4 "cysteine-rich RLK (RECEP	0.863	0.186	0.625	4.4e-37
TAIR|locus:2121686	645	CRK19 "cysteine-rich RLK (RECE	0.897	0.203	0.615	1.2e-35
TAIR|locus:2123116	700	CRK30 "cysteine-rich RLK (RECE	0.910	0.19	0.591	8.1e-35
TAIR|locus:2121636	659	CRK7 "cysteine-rich RLK (RECEP	0.869	0.192	0.590	1.3e-34
TAIR|locus:2121711	660	CRK22 "cysteine-rich RLK (RECE	0.876	0.193	0.571	1.3e-34

TAIR|locus:2121691 CRK11 "cysteine-rich RLK (RECEPTOR-like protein kinase) 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 429 (156.1 bits), Expect = 6.5e-40, P = 6.5e-40
 Identities = 86/133 (64%), Positives = 104/133 (78%)

Query:    10 ADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGV-----LPNEHEIAVKRLSRSSS 64
             +++DI+T +SL +DF+TIE ATNKFST NKLGEGGFG      L N  ++AVKRLS+ S 
Sbjct:   326 SESDISTTDSLVYDFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRLSKKSG 385

Query:    65 QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWD 124
             QG +E  NE V+V KLQH NLVRLLGFCLEREE+IL+YE+V NK LD FL++PEKQ Q D
Sbjct:   386 QGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQSQLD 445

Query:   125 CSRRYKIIGGRGR 137
              +RRYKIIGG  R
Sbjct:   446 WTRRYKIIGGIAR 458

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP;RCA

GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IEP

GO:0016020 "membrane" evidence=ISS

GO:0009611 "response to wounding" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2123126 CRK31 "cysteine-rich RLK (RECEPTOR-like protein kinase) 31" [Arabidopsis thaliana (taxid:3702)]

 Score = 424 (154.3 bits), Expect = 2.4e-39, P = 2.4e-39
 Identities = 85/131 (64%), Positives = 104/131 (79%)

Query:     9 NADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSS 63
             + D+D+T+ +SLQFDF TIE AT+ FS +NKLG+GGFG     +LPNE EIAVKRLS +S
Sbjct:   314 HTDDDMTSPQSLQFDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLSSNS 373

Query:    64 SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQW 123
              QG QE  NEVV+VAKLQH NLVRLLGFC+ER+E+ILVYE+V NK LD FL++P+ + Q 
Sbjct:   374 GQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLFDPKMKSQL 433

Query:   124 DCSRRYKIIGG 134
             D  RRY IIGG
Sbjct:   434 DWKRRYNIIGG 444

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2123111 CRK34 "cysteine-rich RLK (RECEPTOR-like protein kinase) 34" [Arabidopsis thaliana (taxid:3702)]

 Score = 412 (150.1 bits), Expect = 5.3e-38, P = 5.3e-38
 Identities = 85/136 (62%), Positives = 102/136 (75%)

Query:     7 EQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGV-----LPNEHEIAVKRLSR 61
             E  A ++ITT  SLQF F+TIE AT+KFS  N +G GGFG      L +  E+AVKRLS+
Sbjct:   318 EVQATDEITTTHSLQFSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSK 377

Query:    62 SSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQG 121
             +S QGA+E  NE V+V+KLQH NLVRLLGFCLE EEKILVYE+VPNK LD FL++P KQG
Sbjct:   378 TSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQG 437

Query:   122 QWDCSRRYKIIGGRGR 137
             + D +RRY IIGG  R
Sbjct:   438 ELDWTRRYNIIGGIAR 453

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2123056 CRK32 "cysteine-rich RLK (RECEPTOR-like protein kinase) 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 410 (149.4 bits), Expect = 7.9e-38, P = 7.9e-38
 Identities = 86/137 (62%), Positives = 105/137 (76%)

Query:    11 DNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSSSQ 65
             D+D+T+ +SLQFDF T+E AT+KFS +NKLG+GGFG     +LPNE E+AVKRLS +S Q
Sbjct:   298 DDDMTSPQSLQFDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLSSNSGQ 357

Query:    66 GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY--------EP 117
             G QE  NEVV+VAKLQH NLVRLLGFCLER+E+ILVYE+VPNK L+ FL+        +P
Sbjct:   358 GTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDP 417

Query:   118 EKQGQWDCSRRYKIIGG 134
              K+ Q D  RRY IIGG
Sbjct:   418 TKKSQLDWKRRYNIIGG 434

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 409 (149.0 bits), Expect = 1.2e-37, P = 1.2e-37
 Identities = 83/133 (62%), Positives = 101/133 (75%)

Query:    10 ADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSSS 64
             A +DITT +SLQ D+ TI+ AT+ F   NK+G+GGFG      L +  E+AVKRLS+SS 
Sbjct:   324 AGDDITTADSLQLDYRTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSG 383

Query:    65 QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWD 124
             QG  E  NEVV+VAKLQH NLVRLLGFCL+ EE++LVYEYVPNK LD FL++P K+GQ D
Sbjct:   384 QGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLD 443

Query:   125 CSRRYKIIGGRGR 137
              +RRYKIIGG  R
Sbjct:   444 WTRRYKIIGGVAR 456

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

TAIR|locus:2077147 CRK4 "cysteine-rich RLK (RECEPTOR-like protein kinase) 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 404 (147.3 bits), Expect = 4.4e-37, P = 4.4e-37
 Identities = 82/131 (62%), Positives = 100/131 (76%)

Query:    12 NDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSSSQG 66
             +DITT  SLQFDF+ IE ATNKF   NKLG+GGFG     + P+  ++AVKRLS++S QG
Sbjct:   329 DDITTAGSLQFDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQG 388

Query:    67 AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCS 126
              +E  NEV+VVAKLQH NLVRLLGFCLER+E+ILVYE+VPNK LD F+++   Q   D +
Sbjct:   389 EREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDWT 448

Query:   127 RRYKIIGGRGR 137
             RRYKIIGG  R
Sbjct:   449 RRYKIIGGIAR 459

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006952 "defense response" evidence=TAS

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0012501 "programmed cell death" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IEP

TAIR|locus:2121686 CRK19 "cysteine-rich RLK (RECEPTOR-like protein kinase) 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 390 (142.3 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 85/138 (61%), Positives = 102/138 (73%)

Query:     5 VAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRL 59
             VAE    NDITT  SLQFDF+ IE ATN F   NKLG+GGFG      L +  ++AVKRL
Sbjct:   299 VAEDG--NDITTAGSLQFDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRL 356

Query:    60 SRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK 119
             S++S QG +E  NEVVVVAKLQH NLV+LLG+CLE EEKILVYE+VPNK LD+FL++   
Sbjct:   357 SKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTM 416

Query:   120 QGQWDCSRRYKIIGGRGR 137
             + + D +RRYKIIGG  R
Sbjct:   417 KMKLDWTRRYKIIGGIAR 434

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2123116 CRK30 "cysteine-rich RLK (RECEPTOR-like protein kinase) 30" [Arabidopsis thaliana (taxid:3702)]

 Score = 384 (140.2 bits), Expect = 8.1e-35, P = 8.1e-35
 Identities = 84/142 (59%), Positives = 100/142 (70%)

Query:     1 KYNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIA 55
             KY   A + AD DITT+  LQFD + IE AT+ F   NK+G+GGFG      L N  E+A
Sbjct:   314 KYQAFASETAD-DITTVGYLQFDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVA 372

Query:    56 VKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
             VKRLSR+S QG  E  NEV++VAKLQH NLVRLLGF L+ EEKILV+E+VPNK LD FL+
Sbjct:   373 VKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLF 432

Query:   116 ---EPEKQGQWDCSRRYKIIGG 134
                 P K+GQ D +RRY IIGG
Sbjct:   433 GSTNPTKKGQLDWTRRYNIIGG 454

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2121636 CRK7 "cysteine-rich RLK (RECEPTOR-like protein kinase) 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 381 (139.2 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 78/132 (59%), Positives = 97/132 (73%)

Query:    11 DNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSSSQ 65
             ++D TT+ESLQ D+  I+ ATN FS +NK+G GGFG        N  E+AVKRLS++S Q
Sbjct:   313 EDDKTTIESLQLDYRAIQAATNDFSENNKIGRGGFGDVYKGTFSNGTEVAVKRLSKTSEQ 372

Query:    66 GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDC 125
             G  E  NEVVVVA L+H NLVR+LGF +EREE+ILVYEYV NK LDNFL++P K+GQ   
Sbjct:   373 GDTEFKNEVVVVANLRHKNLVRILGFSIEREERILVYEYVENKSLDNFLFDPAKKGQLYW 432

Query:   126 SRRYKIIGGRGR 137
             ++RY IIGG  R
Sbjct:   433 TQRYHIIGGIAR 444

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2121711 CRK22 "cysteine-rich RLK (RECEPTOR-like protein kinase) 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 381 (139.2 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 76/133 (57%), Positives = 99/133 (74%)

Query:     7 EQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSR 61
             E  +D+D++T  SLQ++F+TIE ATNKFS  NKLGEG FG +      N  E+AVKRLS+
Sbjct:   326 EFESDSDVSTTNSLQYEFKTIEAATNKFSKSNKLGEGRFGEVYKGKFSNGTEVAVKRLSK 385

Query:    62 SSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQG 121
              S Q  ++  NE V+V+K+QH NL RLLGFCL+ + K L+YE+V NK LD FL++PEKQG
Sbjct:   386 VSGQDTKKFRNEAVLVSKIQHRNLARLLGFCLQGDGKFLIYEFVLNKSLDYFLFDPEKQG 445

Query:   122 QWDCSRRYKIIGG 134
             + D +RRYKIIGG
Sbjct:   446 ELDWTRRYKIIGG 458

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00006129001 SubName- Full=Chromosome undetermined scaffold_165, whole genome shotgun sequence; (679 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	146
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	8e-15
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-14
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-13
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-13
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-11
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-10
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	9e-10
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-09
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-09
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-08
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	3e-08
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	4e-08
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	6e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	9e-08
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-07
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	4e-07
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	5e-07
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	9e-07
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-06
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-06
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	2e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-06
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	3e-06
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	4e-06
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	5e-06
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	6e-06
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-05
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-05
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-05
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-05
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-05
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-05
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-05
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	3e-05
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	3e-05
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	4e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	5e-05
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	6e-05
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	7e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-04
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	2e-04
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	2e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-04
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	3e-04
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	5e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	5e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	5e-04
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	5e-04
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	6e-04
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	7e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	7e-04
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	0.001
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	0.001
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	0.001
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	0.001
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	0.002
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	0.002
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	0.002
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	0.002
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	0.002
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	0.004
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	0.004

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 68.3 bits (168), Expect = 8e-15
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 11/89 (12%)

Query: 37  DNKLGEGGFGVL----------PNEHEIAVKRLSRSSSQGA-QEINNEVVVVAKLQHINL 85
             KLGEG FG +            + E+AVK L   +S+   +E   E  ++ KL H N+
Sbjct: 4   GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           V+LLG C E E   +V EY+    L ++L
Sbjct: 64  VKLLGVCTEEEPLYIVMEYMEGGDLLSYL 92

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 68.0 bits (167), Expect = 2e-14
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 11/89 (12%)

Query: 37  DNKLGEGGFGVL----------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINL 85
             KLGEG FG +            E E+AVK L   +S Q  +E   E  ++ KL H N+
Sbjct: 4   GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNI 63

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           V+LLG C E E  ++V EY+P   L ++L
Sbjct: 64  VKLLGVCTEEEPLMIVMEYMPGGDLLDYL 92

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 64.9 bits (159), Expect = 2e-13
 Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 10/87 (11%)

Query: 38  NKLGEGGFGV---------LPNEHEIAVKRLSRSSSQGAQ-EINNEVVVVAKLQHINLVR 87
            KLGEG FG               E+AVK L   +S+  + +   E  V+ KL H N+VR
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
           LLG C E E   LV EY+    L ++L
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYL 87

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 64.1 bits (157), Expect = 3e-13
 Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 11/87 (12%)

Query: 39  KLGEGGFGV--------LPNEHEI--AVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
           KLGEG FG              E   AVK L   +S +  +E   E  ++ KL H N+VR
Sbjct: 6   KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVR 65

Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
           LLG C + E   +V EY+P   L +FL
Sbjct: 66  LLGVCTQGEPLYIVTEYMPGGDLLDFL 92

Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 59.6 bits (145), Expect = 1e-11
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 40  LGEGGFGV------LPNEHEIAVKRLSRSSSQGA-QEINNEVVVVAKLQHINLVRLLGFC 92
           LGEGGFG            ++A+K + +  S    +E+  E+ ++ KL H N+V+L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 93  LEREEKILVYEYVPNKRLDNFLYEPEK 119
            +     LV EY     L + L E E 
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKENEG 87

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 55.3 bits (134), Expect = 5e-10
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 39  KLGEGGFGV------LPNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLG 90
           KLG G FG             +AVK L + S  S+  Q    E+ ++ +L H N+VRL+ 
Sbjct: 6   KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65

Query: 91  FCLEREEKILVYEYVPNKRLDNFL 114
              +++   LV EY     L ++L
Sbjct: 66  AFEDKDHLYLVMEYCEGGDLFDYL 89

Length = 260

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 54.8 bits (132), Expect = 9e-10
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 12/87 (13%)

Query: 40  LGEGGFG---------VLPNE--HEIAVKRLSRSSSQGAQE-INNEVVVVAKLQHINLVR 87
           LGEG FG         + P      +AVK L  ++S  A++    E  ++   QH N+V+
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
             G C E +  I+V+EY+ +  L+ FL
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDLNKFL 99

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 54.0 bits (130), Expect = 2e-09
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 12/87 (13%)

Query: 40  LGEGGFG-------VLPNEHE----IAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVR 87
           LGEG FG         PNE      +A+K L  ++  +  QE   E  +++ LQH N+V 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
           LLG C + +   +++EY+ +  L  FL
Sbjct: 73  LLGVCTKEQPTCMLFEYLAHGDLHEFL 99

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 52.9 bits (128), Expect = 3e-09
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 34  FSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQE-INNEVVVVAKLQHINLV 86
           +    KLGEG FG             +A+K + +   +  +E I  E+ ++ KL+H N+V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
           RL     + ++  LV EY     L + L +
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGGDLFDLLKK 90

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 50.9 bits (122), Expect = 2e-08
 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 12/89 (13%)

Query: 40  LGEGGFGVL----------PNEHEIAVKRLSRSSSQGA-QEINNEVVVVAKLQHINLVRL 88
           LG G FG +            +  +A+K L   +S  A +EI +E  V+A + H ++VRL
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 89  LGFCLEREEKILVYEYVPNKRLDNFLYEP 117
           LG CL   +  L+ + +P   L +++   
Sbjct: 75  LGICLS-SQVQLITQLMPLGCLLDYVRNH 102

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 50.8 bits (121), Expect = 3e-08
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)

Query: 39  KLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
           +LGEG FG         +LP + +  +AVK L  +S    Q+   E  ++  LQH ++VR
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
             G C E    ++V+EY+ +  L+ FL
Sbjct: 72  FYGVCTEGRPLLMVFEYMRHGDLNRFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 50.1 bits (120), Expect = 4e-08
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 12/91 (13%)

Query: 38  NKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQGAQE-INNEVVVVAKLQHINL 85
             LG G FG +             E ++AVK L  S S+  +     E ++++K  H N+
Sbjct: 12  RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI 71

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
           VRL+G   ER  + ++ E +    L +FL E
Sbjct: 72  VRLIGVSFERLPRFILLELMAGGDLKSFLRE 102

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 49.7 bits (118), Expect = 6e-08
 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 11/87 (12%)

Query: 39  KLGEGGFG---------VLPNEHEI--AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
           +LGEG FG         + P + +I  AVK L  +S    ++ + E  ++  LQH ++V+
Sbjct: 12  ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 71

Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
             G C+E +  I+V+EY+ +  L+ FL
Sbjct: 72  FYGVCVEGDPLIMVFEYMKHGDLNKFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 49.0 bits (117), Expect = 9e-08
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)

Query: 40  LGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLE 94
           LG G FGV+       + ++A+K + R  +    +   E  V+ KL H NLV+L G C +
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMI-REGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70

Query: 95  REEKILVYEYVPNKRLDNFLYEPEKQGQ 122
           +    +V EY+ N  L N+L E + +  
Sbjct: 71  QRPIFIVTEYMANGCLLNYLRERKGKLG 98

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 49.1 bits (117), Expect = 1e-07
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 12/87 (13%)

Query: 40  LGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQ-EINNEVVVVAKLQHINLVR 87
           +G+G FG         +LP E    +AVK L   +S   Q +   E  ++A+  H N+V+
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
           LLG C   +   L++EY+    L+ FL
Sbjct: 73  LLGVCAVGKPMCLLFEYMAYGDLNEFL 99

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 47.3 bits (113), Expect = 4e-07
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 11/87 (12%)

Query: 38  NKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVR 87
            +LG G FG       ++ +  E+  AVK L +     G +E   E  V+A+L H  +VR
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
           L+G C   E  +LV E  P   L  +L
Sbjct: 61  LIGVCKG-EPLMLVMELAPLGPLLKYL 86

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 46.9 bits (112), Expect = 5e-07
 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 6/92 (6%)

Query: 32  NKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLV 86
                + KLG G FG           ++AVK L +  +   +    E  ++ KL+H  LV
Sbjct: 6   ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLV 64

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
           +L   C E E   +V EY+    L +FL   E
Sbjct: 65  QLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGE 96

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 46.4 bits (110), Expect = 9e-07
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 6/89 (6%)

Query: 39  KLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCL 93
           +LG G FGV+       ++++A+K + +  S    E   E  V+ KL H  LV+L G C 
Sbjct: 11  ELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCT 69

Query: 94  EREEKILVYEYVPNKRLDNFLYEPEKQGQ 122
           ++    +V EY+ N  L N+L E  K+ Q
Sbjct: 70  KQRPIYIVTEYMSNGCLLNYLREHGKRFQ 98

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 6/81 (7%)

Query: 39  KLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCL 93
           ++G G FG++       + ++A+K + R  +   ++   E  V+ KL H  LV+L G C 
Sbjct: 11  EIGSGQFGLVWLGYWLEKRKVAIKTI-REGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCT 69

Query: 94  EREEKILVYEYVPNKRLDNFL 114
           ER    LV+E++ +  L ++L
Sbjct: 70  ERSPICLVFEFMEHGCLSDYL 90

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)

Query: 38  NKLGEGGFGV------LPNEHEIAVK--RLSRSSSQGAQEINNEVVVVAKLQHINLVRLL 89
             LG G FG             +AVK   LS  S +  + +  E+ +++ LQH N+VR  
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 90  GFCLEREEK-ILVY-EYVP 106
           G   + E+  + ++ EYV 
Sbjct: 66  GSERDEEKNTLNIFLEYVS 84

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 21/113 (18%)

Query: 32  NKFSTDNKLGEGGFG---------------VLPNEHE-----IAVKRLSRSSSQGAQ-EI 70
            +     KLGEG FG                   E +     +AVK L    ++ A+ + 
Sbjct: 5   QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDF 64

Query: 71  NNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQW 123
             E+ ++++L++ N++RLLG C+  +   ++ EY+ N  L+ FL + E +  +
Sbjct: 65  LKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTF 117

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 5/94 (5%)

Query: 34  FSTDNKLGEGGF-----GVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           F+ + KLG G F     G+  N   +A+K L        Q+   EV  + +L+H +L+ L
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 89  LGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQ 122
              C   E   ++ E +    L  FL  PE Q  
Sbjct: 68  FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVL 101

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query: 40  LGEGGFG-VLPNEHE---IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER 95
           +G+G FG V+  ++    +AVK L +  S  AQ    E  V+  L+H NLV+LLG  L+ 
Sbjct: 14  IGKGEFGDVMLGDYRGQKVAVKCL-KDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQG 72

Query: 96  EEKILVYEYVPNKRLDNFL 114
               +V EY+    L ++L
Sbjct: 73  NPLYIVTEYMAKGSLVDYL 91

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 44.6 bits (106), Expect = 4e-06
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 12/98 (12%)

Query: 37  DNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQEIN--NEVVVVAKLQHINL 85
           +  +G G FG        LP + EI  A+K L ++ S   Q ++   E  ++ +  H N+
Sbjct: 9   EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTL-KAGSSDKQRLDFLTEASIMGQFDHPNI 67

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQW 123
           +RL G   +    +++ EY+ N  LD FL E + +   
Sbjct: 68  IRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTV 105

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 44.3 bits (105), Expect = 5e-06
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 54  IAVKRLSRSSSQGA-QEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDN 112
           +AVK L   +S  A ++   EV ++++L   N+ RLLG C       ++ EY+ N  L+ 
Sbjct: 49  VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQ 108

Query: 113 FLYE 116
           FL +
Sbjct: 109 FLQK 112

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 44.5 bits (105), Expect = 6e-06
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)

Query: 26  TIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAK 79
           TI D  +    +N +  G  G       + N  +  VK ++  +S  + EI +    + K
Sbjct: 684 TINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIAD----MGK 739

Query: 80  LQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGG 134
           LQH N+V+L+G C   +   L++EY+  K L   L    +   W+  RR KI  G
Sbjct: 740 LQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL----RNLSWE--RRRKIAIG 788

Length = 968

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 11/87 (12%)

Query: 39  KLGEGGFGVL---------PNEHE--IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
           +LGEG FG +         P + +  +AVK L   +    ++   E  ++  LQH ++V+
Sbjct: 12  ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 71

Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
             G C + +  I+V+EY+ +  L+ FL
Sbjct: 72  FYGVCGDGDPLIMVFEYMKHGDLNKFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 54  IAVKRLSRSSSQGAQ-EINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDN 112
           + VK L ++  +  Q E   E+ +  KL H N+VRLLG C E E   ++ EY     L  
Sbjct: 38  VLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQ 97

Query: 113 FL 114
           FL
Sbjct: 98  FL 99

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)

Query: 33  KFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLV 86
            F    K+G+GGFG            E+A+K +   S +  ++I NE+ ++ K +H N+V
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIV 60

Query: 87  RLLGFCLEREEKILVYEYVP 106
           +  G  L+++E  +V E+  
Sbjct: 61  KYYGSYLKKDELWIVMEFCS 80

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 6/81 (7%)

Query: 40  LGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCL 93
           LG+G +G+      L  +  IA+K +    S+  Q ++ E+ + + L+H N+V+ LG   
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS 75

Query: 94  EREEKILVYEYVPNKRLDNFL 114
           E     +  E VP   L   L
Sbjct: 76  ENGFFKIFMEQVPGGSLSALL 96

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)

Query: 32  NKFSTDNKLGEGGFGVL-----PNEHEI-AVKRL--SRSSSQGAQEINNEVVVVAKLQHI 83
           NK+     +GEG +GV+         EI A+K+   S       +    EV V+ +L+H 
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHE 60

Query: 84  NLVRLLGFCLEREEKILVYEYVPNKRLD 111
           N+V L      +    LV+EYV    L+
Sbjct: 61  NIVNLKEAFRRKGRLYLVFEYVERTLLE 88

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 42.3 bits (99), Expect = 2e-05
 Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 7/86 (8%)

Query: 33  KFSTDNKLGEGGFG-VLPNEH---EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           K +    +GEG FG VL  E+   ++AVK +    +  AQ    E  V+ KL H NLVRL
Sbjct: 7   KLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVT--AQAFLEETAVMTKLHHKNLVRL 64

Query: 89  LGFCLEREEKILVYEYVPNKRLDNFL 114
           LG  L     I V E +    L NFL
Sbjct: 65  LGVILHNGLYI-VMELMSKGNLVNFL 89

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 42.2 bits (99), Expect = 2e-05
 Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 26  TIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAK 79
           ++ D   K++   K+G+G  G +          E+A+K+++       + I NE++V+ +
Sbjct: 13  SVGDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRE 72

Query: 80  LQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
            +H N+V  L   L  +E  +V EY+    L + + E
Sbjct: 73  NKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 109

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 8/75 (10%)

Query: 38  NKLGEGGFG-----VLPNEHEI-AVK--RLSRSSSQGAQEINNEVVVVAKLQHINLVRLL 89
           NK+G G FG     V  +  E+ AVK  R+  +  +  +EI +E+ V+  L+H NLV+  
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65

Query: 90  GFCLEREEKILVYEY 104
           G  + RE+  +  EY
Sbjct: 66  GVEVHREKVYIFMEY 80

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 42.1 bits (99), Expect = 3e-05
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 38  NKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGF 91
           +KLG G +G +           +AVK L +  +   +E   E  V+ +++H NLV+LLG 
Sbjct: 12  HKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 70

Query: 92  CLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           C       ++ E++    L ++L E  +Q
Sbjct: 71  CTREPPFYIITEFMTYGNLLDYLRECNRQ 99

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 41.8 bits (98), Expect = 3e-05
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 23/99 (23%)

Query: 39  KLGEGGFGV-----LPNEHE-----------------IAVKRLSRSSSQGAQ-EINNEVV 75
           KLGEG FG      + N  +                 +AVK L   +++ A+ +   EV 
Sbjct: 12  KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVK 71

Query: 76  VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           ++++L+  N++RLLG C++ +   ++ EY+ N  L+ FL
Sbjct: 72  ILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFL 110

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 41.6 bits (98), Expect = 4e-05
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 13/90 (14%)

Query: 38  NKLGEGGFGVLPNEH----------EIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLV 86
            +LGEG FG +              ++AVK L+ S   Q   +   E+ ++  L H N+V
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69

Query: 87  RLLGFCLEREEKI--LVYEYVPNKRLDNFL 114
           +  G C +   +   L+ EY+P+  L ++L
Sbjct: 70  KYKGVCEKPGGRSLRLIMEYLPSGSLRDYL 99

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 12/101 (11%)

Query: 33  KFSTDNKLGEGGFGV-----------LPNEHEIAVKRLSRSSSQGA-QEINNEVVVVAKL 80
                  LGEG FG                  +AVK L  ++S    +++ +E  ++ ++
Sbjct: 1   NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV 60

Query: 81  QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQG 121
            H ++++L G C +    +L+ EY     L +FL E  K G
Sbjct: 61  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVG 101

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 41.3 bits (95), Expect = 6e-05
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 7/107 (6%)

Query: 33  KFSTDNKLGEGGFGVLP---NEHEIAVKRLSR---SSSQGAQEINNEVVVVAKLQH-INL 85
            +    KLGEG FG +    +   +A+K L++   S S+  +    E+ ++A L H  N+
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKII 132
           V+L  F  +     LV EYV    L++ L +  ++G    S    I+
Sbjct: 61  VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFIL 107

Length = 384

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 41.0 bits (96), Expect = 7e-05
 Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 39  KLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCL 93
           +LG G FGV+       + ++A+K +    +   ++   E  V+ KL H  LV+L G C 
Sbjct: 11  ELGSGQFGVVHLGKWRAQIKVAIKAI-NEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCT 69

Query: 94  EREEKILVYEYVPNKRLDNFLYEPEKQGQ 122
           +++   +V E++ N  L N+L   ++QG+
Sbjct: 70  QQKPLYIVTEFMENGCLLNYLR--QRQGK 96

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 8/89 (8%)

Query: 39  KLGEGGFG-----VLPNEHEIAVKRLSRSSSQGAQEIN--NEVVVVAKLQHINLVRLLGF 91
           K+G+G FG     VL    E+AVK   RS+     +     E  ++ +  H N+V+L+G 
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKT-CRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGV 60

Query: 92  CLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           C++++   +V E VP   L  FL + + +
Sbjct: 61  CVQKQPIYIVMELVPGGSLLTFLRKKKNR 89

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 11/78 (14%)

Query: 39  KLGEGGFGVL-------PNEHEI--AVKRLSRSSSQGA-QEINNEVVVVAKLQHINLVRL 88
           KLG+G FGV+            I  AVK L          +   E  ++  L H NL+RL
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 89  LGFCLEREEKILVYEYVP 106
            G  L      +V E  P
Sbjct: 62  YGVVLTHPLM-MVTELAP 78

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 12/87 (13%)

Query: 40  LGEGGFGVLP---------NEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLL 89
           LG+G FG +          N  E +AVK+L  S+++  ++   E+ ++  LQH N+V+  
Sbjct: 12  LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71

Query: 90  GFCLE--REEKILVYEYVPNKRLDNFL 114
           G C    R    LV EY+P   L ++L
Sbjct: 72  GVCYSAGRRNLRLVMEYLPYGSLRDYL 98

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 39.5 bits (92), Expect = 2e-04
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 12/92 (13%)

Query: 40  LGEGGFG-------VLPNEHE--IAVKRLSRSSSQGAQEIN--NEVVVVAKLQHINLVRL 88
           LG G FG        LP++ E  +A+  L R+     Q      E + + +  H N+VRL
Sbjct: 13  LGTGRFGELCRGCLKLPSKRELPVAIHTL-RAGCSDKQRRGFLAEALTLGQFDHSNIVRL 71

Query: 89  LGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
            G        ++V EY+ N  LD+FL + E Q
Sbjct: 72  EGVITRGNTMMIVTEYMSNGALDSFLRKHEGQ 103

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 11/99 (11%)

Query: 39  KLGEGGFG-------VLPN-EHE--IAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
           +LGE  FG        LP  +H   +A+K L   ++ Q   E   E  ++A+L H N+V 
Sbjct: 12  ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC 71

Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCS 126
           LLG   + +   +++EY+    L  FL          CS
Sbjct: 72  LLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCS 110

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 29  DATNKFSTDNKLGEGGFGVLPNEHE------IAVKRLSRSSSQGAQEINNEVVVVAKLQH 82
           D  +      K+GEG  G++    +      +AVK++     Q  + + NEVV++   QH
Sbjct: 16  DPRSYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQH 75

Query: 83  INLVRLLGFCLEREEKILVYEYV 105
            N+V +    L  +E  +V E++
Sbjct: 76  PNIVEMYSSYLVGDELWVVMEFL 98

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 39.1 bits (91), Expect = 3e-04
 Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 54  IAVKRLSRSSSQGAQ-EINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDN 112
           +AVK L   +++ A+ +   E+ ++++L+  N++RLL  C+  +   ++ EY+ N  L+ 
Sbjct: 49  VAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQ 108

Query: 113 FLYEPEKQGQ 122
           FL   E Q  
Sbjct: 109 FLSRHEPQEA 118

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 39.1 bits (91), Expect = 3e-04
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 11/80 (13%)

Query: 38  NKLGEGGFGV----LPNEHE-IAVKRLSRSSS------QGAQEINNEVVVVAKLQHINLV 86
             LG+G +G     L N+ + IAVK++   +S      +  +++  EV ++  L+H+N+V
Sbjct: 6   EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 87  RLLGFCLEREEKILVYEYVP 106
           + LG CL+     +  E+VP
Sbjct: 66  QYLGTCLDDNTISIFMEFVP 85

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 38.4 bits (89), Expect = 5e-04
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 11/72 (15%)

Query: 33 KFSTDNKLGEGGFGVL------PNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKLQ 81
          +F     LG G FG +      P   ++    A+K L  ++S  A +EI +E  V+A + 
Sbjct: 8  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 67

Query: 82 HINLVRLLGFCL 93
          + ++ RLLG CL
Sbjct: 68 NPHVCRLLGICL 79

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 38.6 bits (89), Expect = 5e-04
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 6/97 (6%)

Query: 26  TIEDATNKFSTDNKLGEGGFGVLPNE------HEIAVKRLSRSSSQGAQEINNEVVVVAK 79
           +I D   K++   K+G+G  G +          E+A+K+++       + I NE++V+ +
Sbjct: 13  SIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKE 72

Query: 80  LQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
           L++ N+V  L   L  +E  +V EY+    L + + E
Sbjct: 73  LKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE 109

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 38.3 bits (89), Expect = 5e-04
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 13/94 (13%)

Query: 40  LGEGGFG----------VLPNEHEI--AVKRLSRSSS-QGAQEINNEVVVVAKLQHINLV 86
           LG G FG          + P    I  AVK L + ++ Q  +E   E  +++   H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +LLG CL  E + ++ E +    L ++L +   +
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVE 96

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 38.5 bits (89), Expect = 5e-04
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 45  FGVLPNE--HEIAVKRLSRSSSQGA--QEINNEVVVVAKLQHINLVRLLGFCLEREEKIL 100
           FG  P E    +A+K L +  ++G   +E  +E ++ ++LQH N+V LLG   + +   +
Sbjct: 27  FGTAPGEQTQAVAIKTL-KDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85

Query: 101 VYEYVPNKRLDNFL 114
           ++ Y  +  L  FL
Sbjct: 86  IFSYCSHSDLHEFL 99

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 38.4 bits (89), Expect = 6e-04
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 20/109 (18%)

Query: 40  LGEGGFG-VLPNEH---EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER 95
           +G+G FG V+  ++   ++AVK +   ++  AQ    E  V+ +L+H NLV+LLG  +E 
Sbjct: 14  IGKGEFGDVMLGDYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEE 71

Query: 96  EEKI-LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF 143
           +  + +V EY+    L ++L           SR   ++GG   DC   F
Sbjct: 72  KGGLYIVTEYMAKGSLVDYLR----------SRGRSVLGG---DCLLKF 107

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 13/87 (14%)

Query: 40  LGEGGFGV------LPNEHEIAVKRLS-----RSSSQGAQEINNEVVVVAKLQHINLVRL 88
           LG G FG       L +    AVK +S     ++  +  +++  E+ +++KLQH N+V+ 
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 89  LGFCLEREEKILVY-EYVPNKRLDNFL 114
           LG   E E+ + ++ E VP   L   L
Sbjct: 68  LGTERE-EDNLYIFLELVPGGSLAKLL 93

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 38.0 bits (88), Expect = 7e-04
 Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 13/88 (14%)

Query: 40  LGEGGFGVL------PNEHE----IAVKRLSRSSSQGAQE-INNEVVVVAKLQHINLVRL 88
           LGEG FG +      P        +AVK L R   Q        E+ ++  L H N+V+ 
Sbjct: 12  LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKY 71

Query: 89  LGFCLEREEKI--LVYEYVPNKRLDNFL 114
            G C E+  K   L+ EYVP   L ++L
Sbjct: 72  KGCCSEQGGKGLQLIMEYVPLGSLRDYL 99

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)

Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           +L H +LV+L G C+ R+E I+V EYV    LD FL
Sbjct: 57  QLSHKHLVKLYGVCV-RDENIMVEEYVKFGPLDVFL 91

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 33  KFSTDNKLGEGGFGVL---PNEHE---IAVKRLSRS--SSQGAQEINNEVVVVAKLQHIN 84
            +   + +G G FGV+    N      +A+K++S      +  + I  E+ ++  L+H N
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 85  LVRLLGFCLEREEKILVYEYVPNKRL 110
           +V+ +G     +   ++ EY  N  L
Sbjct: 61  IVKYIGSIETSDSLYIILEYAENGSL 86

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 10/85 (11%)

Query: 40  LGEGGFGVLPNEH--------EIAVKRLSRSSSQG-AQEINNEVVVVAKL-QHINLVRLL 89
           +GEG FG +            + A+KR+   +S+   ++   E+ V+ KL  H N++ LL
Sbjct: 15  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 74

Query: 90  GFCLEREEKILVYEYVPNKRLDNFL 114
           G C  R    L  EY P+  L +FL
Sbjct: 75  GACEHRGYLYLAIEYAPHGNLLDFL 99

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 9/86 (10%)

Query: 38  NKLGEGGFG-VLPNE-------HEIAVKRLSRSSSQGAQEIN-NEVVVVAKLQHINLVRL 88
           +++G G FG VL  E         + VK L  S++   Q +   EV    +L H N+++ 
Sbjct: 1   DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQC 60

Query: 89  LGFCLEREEKILVYEYVPNKRLDNFL 114
           LG C+E    +LV E+ P   L N+L
Sbjct: 61  LGQCIESIPYLLVLEFCPLGDLKNYL 86

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 9/86 (10%)

Query: 28  EDATNKFSTDNKLGEGGFGVLPNEHE------IAVKRLSRSSSQGA---QEINNEVVVVA 78
           ED    F+   ++G G FG +    +      +A+K++S S  Q     Q+I  EV  + 
Sbjct: 21  EDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQ 80

Query: 79  KLQHINLVRLLGFCLEREEKILVYEY 104
           +++H N +   G  L      LV EY
Sbjct: 81  RIKHPNSIEYKGCYLREHTAWLVMEY 106

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 6/84 (7%)

Query: 39  KLGEGGFGVLPNEHE------IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
           K+GEG  G++    E      +AVK +     Q  + + NEVV++   QH N+V +    
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY 87

Query: 93  LEREEKILVYEYVPNKRLDNFLYE 116
           L  EE  ++ E++    L + + +
Sbjct: 88  LVGEELWVLMEFLQGGALTDIVSQ 111

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 6/85 (7%)

Query: 39  KLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCL 93
           KLG G FG +      N  ++AVK L +  +   Q    E  ++  LQH  LVRL     
Sbjct: 13  KLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 71

Query: 94  EREEKILVYEYVPNKRLDNFLYEPE 118
           + E   ++ EY+    L +FL   E
Sbjct: 72  KEEPIYIITEYMAKGSLLDFLKSDE 96

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 32  NKFSTDNKLGEGGFG-VLPNEHE-----IAVKR-LSRSSSQGAQEIN-NEVVVVAKLQHI 83
            K+     +GEG +G V+  +H+     +A+K+ L     +  ++I   E+ ++ +L+H 
Sbjct: 1   EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHE 60

Query: 84  NLVRLLGFCLEREEKILVYEYVPNKRLDN 112
           NLV L+     ++   LV+E+V +  LD+
Sbjct: 61  NLVNLIEVFRRKKRLYLVFEFVDHTVLDD 89

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 12/88 (13%)

Query: 40  LGEGGFGVLPN-----EHE-----IAVKRLSRSSSQGAQ-EINNEVVVVAKLQHINLVRL 88
           LG G FG +       E E     +A+K L+ ++   A  E  +E +++A + H +LVRL
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74

Query: 89  LGFCLEREEKILVYEYVPNKRLDNFLYE 116
           LG CL    + LV + +P+  L ++++E
Sbjct: 75  LGVCLSPTIQ-LVTQLMPHGCLLDYVHE 101

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 35.8 bits (82), Expect = 0.004
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 9/86 (10%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGA---QEINNEVVVVA 78
           +D    FS   ++G G FG       + N   +A+K++S S  Q     Q+I  EV  + 
Sbjct: 11  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70

Query: 79  KLQHINLVRLLGFCLEREEKILVYEY 104
           KL+H N ++  G  L      LV EY
Sbjct: 71  KLRHPNTIQYRGCYLREHTAWLVMEY 96

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 35.6 bits (82), Expect = 0.004
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 13/79 (16%)

Query: 40  LGEGGFGV------LPNEHEIAVKRLS--RSSSQGAQEIN---NEVVVVAKLQHINLVRL 88
           LG+G FG       +    E+AVK++     S +  +E+N    E+ ++  LQH  +V+ 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 89  LGFCLEREEKILVY-EYVP 106
            G CL  +E + ++ EY+P
Sbjct: 70  YG-CLRDDETLSIFMEYMP 87

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	146
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.89
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.85
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.83
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.81
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.79
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.79
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.78
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.77
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.73
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.72
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.7
KOG0605	550	consensus NDR and related serine/threonine kinases	99.7
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.7
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.69
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.69
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.69
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.69
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.67
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.66
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.65
KOG0198	313	consensus MEKK and related serine/threonine protei	99.64
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.64
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.64
KOG0610	459	consensus Putative serine/threonine protein kinase	99.64
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.64
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.64
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.63
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.63
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.63
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.63
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.63
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.62
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.62
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.62
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.61
KOG0589	426	consensus Serine/threonine protein kinase [General	99.61
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.61
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.61
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.61
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.61
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.6
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.6
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.6
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.6
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.6
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.6
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.6
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.6
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.6
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.6
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.6
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.59
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.59
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.59
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.59
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.59
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.59
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.59
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.58
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.58
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.58
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.58
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.58
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.57
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.57
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.57
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.57
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.57
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.57
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.57
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.57
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.57
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.57
PHA02988	283	hypothetical protein; Provisional	99.57
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.56
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.56
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.56
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.56
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.56
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.56
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.56
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.56
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.55
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.55
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.55
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.55
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.55
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.55
PTZ00267	478	NIMA-related protein kinase; Provisional	99.55
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.55
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.55
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.55
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.55
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.55
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.54
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.54
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.54
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.54
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.54
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.54
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.54
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.54
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.54
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.54
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.54
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.53
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.53
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.53
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.53
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.53
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.53
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.53
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.53
KOG0586	596	consensus Serine/threonine protein kinase [General	99.53
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.53
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.52
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.52
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.52
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.52
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.52
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.52
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.52
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.52
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.52
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.52
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.52
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.52
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.52
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.52
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.52
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.52
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.52
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.52
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.52
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.51
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.51
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.51
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.51
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.51
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.51
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.51
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.51
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.51
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.51
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.51
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.51
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.5
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.5
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.5
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.5
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.5
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.5
KOG0578	550	consensus p21-activated serine/threonine protein k	99.5
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.5
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.5
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.5
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.5
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.5
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.5
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.49
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.49
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.49
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.49
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.49
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.49
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.49
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.49
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.49
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.49
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.49
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.49
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.49
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.49
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.48
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.48
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.48
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.48
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.48
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.48
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.48
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.48
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.48
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.48
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.48
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.48
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.48
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.48
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.48
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.48
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.47
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.47
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.47
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.47
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.47
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.47
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.47
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.47
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.47
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.47
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.47
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.47
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.47
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.47
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.47
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.47
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.47
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.47
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.47
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.47
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.47
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.47
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.47
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.47
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.47
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.46
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.46
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.46
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.46
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.46
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.46
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.46
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.46
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.46
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.46
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.46
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.46
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.46
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.45
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.45
PHA03212	391	serine/threonine kinase US3; Provisional	99.45
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.45
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.45
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.45
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.45
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.45
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.45
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.45
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.44
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.44
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.44
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.44
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.44
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.44
KOG0584	632	consensus Serine/threonine protein kinase [General	99.44
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.44
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.44
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.44
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.44
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.43
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.43
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.43
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.43
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.43
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.43
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.43
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.43
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.43
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.42
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.42
PTZ00283	496	serine/threonine protein kinase; Provisional	99.42
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.42
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.42
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.42
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.42
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.42
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.42
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.41
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.41
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.41
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.41
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.41
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.41
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.41
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.4
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.4
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.4
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.4
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.4
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.39
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.39
KOG3653	534	consensus Transforming growth factor beta/activin	99.39
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.39
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.39
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.39
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.39
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.39
PLN00009	294	cyclin-dependent kinase A; Provisional	99.38
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.38
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.38
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.38
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.38
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.38
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.38
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.38
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.38
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.37
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.37
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.37
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.37
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.37
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.37
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.37
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.37
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.37
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.37
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.37
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.36
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.36
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.36
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.36
PHA03209	357	serine/threonine kinase US3; Provisional	99.35
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.35
PTZ00036	440	glycogen synthase kinase; Provisional	99.35
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.35
PHA03211	461	serine/threonine kinase US3; Provisional	99.35
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.35
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.35
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.35
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.34
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.34
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.34
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.34
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.34
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.33
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.33
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.33
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.33
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.33
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.32
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.32
PHA03207	392	serine/threonine kinase US3; Provisional	99.32
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.32
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.32
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.31
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.31
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.3
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.3
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.3
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.29
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.29
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.29
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.28
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.28
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.28
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.27
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.27
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.27
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.26
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.26
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.26
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.25
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.25
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.25
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.24
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.24
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.24
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.24
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.24
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.24
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.23
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.23
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.22
KOG1152	772	consensus Signal transduction serine/threonine kin	99.22
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.22
PTZ00284	467	protein kinase; Provisional	99.21
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.21
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.21
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.21
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.2
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.2
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.2
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.19
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.19
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.18
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.15
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.13
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.13
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.12
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.11
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.11
PRK09188	365	serine/threonine protein kinase; Provisional	99.09
PHA03210	501	serine/threonine kinase US3; Provisional	99.05
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.03
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.02
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.0
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.99
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.98
PRK10345	210	hypothetical protein; Provisional	98.96
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.95
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.92
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	98.91
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.88
PRK14879	211	serine/threonine protein kinase; Provisional	98.84
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.8
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.77
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.76
KOG0596	677	consensus Dual specificity; serine/threonine and t	98.75
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.73
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.72
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	98.67
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	98.66
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.64
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	98.63
smart00090	237	RIO RIO-like kinase.	98.6
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.52
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.51
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.51
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	98.49
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	98.49
PHA02882	294	putative serine/threonine kinase; Provisional	98.49
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	98.45
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	98.4
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.4
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	98.39
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.34
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.32
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.32
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.27
PRK12274	218	serine/threonine protein kinase; Provisional	98.18
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	97.92
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.91
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	97.86
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.59
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.55
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	97.53
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	97.48
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.35
KOG1243	690	consensus Protein kinase [General function predict	97.19
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.05
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	96.47
KOG1266	458	consensus Protein kinase [Signal transduction mech	96.41
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.03
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	95.66
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	95.31
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	95.23
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	95.21
PLN00181	793	protein SPA1-RELATED; Provisional	95.04
KOG0590	601	consensus Checkpoint kinase and related serine/thr	94.85
PLN02876	822	acyl-CoA dehydrogenase	94.14
KOG0590	601	consensus Checkpoint kinase and related serine/thr	93.99
PRK10593	297	hypothetical protein; Provisional	93.48
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	93.39
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	93.2
KOG3087	229	consensus Serine/threonine protein kinase [General	93.19
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	93.0
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	92.17
PF01636	239	APH: Phosphotransferase enzyme family This family	90.79
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	90.52
COG0478	304	RIO-like serine/threonine protein kinase fused to	88.95
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	88.39
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	88.04
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	87.83
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	85.78
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	84.87
PRK09550	401	mtnK methylthioribose kinase; Reviewed	83.1
KOG0576	829	consensus Mitogen-activated protein kinase kinase	80.76
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	80.17

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=2.9e-22  Score=140.98  Aligned_cols=124  Identities=42%  Similarity=0.698  Sum_probs=107.1

Q ss_pred             cccccChhHHHHHccCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEE
Q 048150           18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC   92 (146)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~   92 (146)
                      ....|++.++...+++|...+.||+|+||.|+     .|..+|||++..........|..|+.++.+++|+|+++|+|+|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            56778999999999999999999999999984     4468999988654332145599999999999999999999999


Q ss_pred             EcCC-ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           93 LERE-EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        93 ~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+.+ ...||+||+++|+|.+++...... .++|..+++|+.++|+||+|.
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yL  190 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYL  190 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            9988 499999999999999999764333 789999999999999998653

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.85  E-value=1.7e-20  Score=129.63  Aligned_cols=109  Identities=19%  Similarity=0.348  Sum_probs=95.3

Q ss_pred             HccCcccceeecccCceeec------CCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           30 ATNKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ...+|.....||.|+|+.|+      .+..||+|++...  ......-+..|+.+++.++|+||+.+.+++..++.+++|
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV   87 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV   87 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence            44678888899999999994      4568999999765  333456678999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||||.+|+|..+|+..   ..+++..+..++.|++.||++
T Consensus        88 MEyC~gGDLs~yi~~~---~~l~e~t~r~Fm~QLA~alq~  124 (429)
T KOG0595|consen   88 MEYCNGGDLSDYIRRR---GRLPEATARHFMQQLASALQF  124 (429)
T ss_pred             EEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999763   358999999999999999987

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.83  E-value=1.3e-20  Score=133.53  Aligned_cols=120  Identities=24%  Similarity=0.403  Sum_probs=103.3

Q ss_pred             hhHHHHHccCcccceeecccCceee----cCCc-EEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           24 FETIEDATNKFSTDNKLGEGGFGVL----PNEH-EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        24 ~~~~~~~~~~~~~~~~lg~g~fg~v----~~~~-~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      ...|....+.++..+.||+|.||.|    +.+. .+|+|.++.. ......|..|+.+|.+++|++|++++++|..+..+
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~pi  276 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPI  276 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCce
Confidence            4566666677788999999999999    4444 8999998643 44567889999999999999999999999998899


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh----hccC
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR----NFLF  145 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~----~~~~  145 (146)
                      +|||||++.|+|.++|+.. ....+...+.+.++.|||+||.|    +|||
T Consensus       277 yIVtE~m~~GsLl~yLr~~-~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IH  326 (468)
T KOG0197|consen  277 YIVTEYMPKGSLLDYLRTR-EGGLLNLPQLLDFAAQIAEGMAYLESKNYIH  326 (468)
T ss_pred             EEEEEecccCcHHHHhhhc-CCCccchHHHHHHHHHHHHHHHHHHhCCccc
Confidence            9999999999999999873 34458888999999999999999    7888

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.81  E-value=1.8e-19  Score=126.54  Aligned_cols=113  Identities=24%  Similarity=0.434  Sum_probs=94.2

Q ss_pred             ccCcccceeecccCceee----cCCcE-EEEEEeccCCcc--cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC-ceeEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL----PNEHE-IAVKRLSRSSSQ--GAQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVY  102 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v----~~~~~-~a~k~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~-~~~lv~  102 (146)
                      .......+.+|.|+||.|    +.|.. +|+|.+......  ....|..|+.+|.+++||||+.++|.+..+. .+++||
T Consensus        40 ~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt  119 (362)
T KOG0192|consen   40 PDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT  119 (362)
T ss_pred             hHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence            344455666999999999    67777 999999754322  2568999999999999999999999998887 799999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccCC
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~  146 (146)
                      ||+++|+|.+++... ....+++..++.++.||++||.  |||+
T Consensus       120 Ey~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~--YLH~  160 (362)
T KOG0192|consen  120 EYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGME--YLHS  160 (362)
T ss_pred             EeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHH--HHhc
Confidence            999999999999763 3456999999999999999995  5553

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.79  E-value=2.6e-19  Score=132.88  Aligned_cols=117  Identities=28%  Similarity=0.403  Sum_probs=98.7

Q ss_pred             HHHHccCcccceeecccCceeecCC-----------cEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEEc
Q 048150           27 IEDATNKFSTDNKLGEGGFGVLPNE-----------HEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCLE   94 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v~~~-----------~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~~   94 (146)
                      ...+.++....+.||+|+||+|..+           ..||||.++..... ..+.|.+|+.++..++|+|||+|+|+|..
T Consensus       481 ~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~  560 (774)
T KOG1026|consen  481 LEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE  560 (774)
T ss_pred             eEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc
Confidence            3556678888999999999999222           35899999765444 57899999999999999999999999999


Q ss_pred             CCceeEEEEecCCCCHHHhhcCCC-----------CCCCCChHHHHHHHHHHHHHHhhhc
Q 048150           95 REEKILVYEYVPNKRLDNFLYEPE-----------KQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        95 ~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      .+..++|+|||..|||.+||+...           ...+++..+.+.|+.|||.||.|..
T Consensus       561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs  620 (774)
T KOG1026|consen  561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS  620 (774)
T ss_pred             CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999997421           1234788999999999999999943

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.79  E-value=9e-19  Score=125.48  Aligned_cols=118  Identities=25%  Similarity=0.347  Sum_probs=100.6

Q ss_pred             cChhHHHHHccCcccceeecccCceeecCC----------cEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeE
Q 048150           22 FDFETIEDATNKFSTDNKLGEGGFGVLPNE----------HEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRL   88 (146)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~lg~g~fg~v~~~----------~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l   88 (146)
                      .....|+...++....+.||+|+||.|+.|          ..||+|.....   .......+.+|+++|.+++|+|++.+
T Consensus       147 I~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~  226 (474)
T KOG0194|consen  147 IPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRF  226 (474)
T ss_pred             ccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            344678888899999999999999999322          12788888642   23457789999999999999999999


Q ss_pred             eeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           89 LGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        89 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +|+.....+++++||+|.+|+|.++|+....  .++..+...++.+.+.||.|
T Consensus       227 yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~Y  277 (474)
T KOG0194|consen  227 YGVAVLEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEY  277 (474)
T ss_pred             EEEEcCCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHH
Confidence            9999999999999999999999999986332  58999999999999999987

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.78  E-value=3.7e-18  Score=123.02  Aligned_cols=109  Identities=17%  Similarity=0.263  Sum_probs=97.4

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ..|...+.||+|+|+.+      ..|..+|+|++.+.   +....+.+..|+.+...++||||++++++|++.+++|++.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            56999999999999987      56789999999753   4456788999999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      |.|..++|..++.   +...+++.++..++.||+.||.|.+
T Consensus        98 ELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH  135 (592)
T KOG0575|consen   98 ELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLH  135 (592)
T ss_pred             EecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHH
Confidence            9999999999986   3556999999999999999998643

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.77  E-value=9.8e-19  Score=126.08  Aligned_cols=117  Identities=26%  Similarity=0.449  Sum_probs=98.1

Q ss_pred             HHHccCcccceeecccCceee-----cCCcEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           28 EDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      +.+.+...+++.||+|.||.|     ..+..||+|.++.. .......|.+|+++|.+++||||+.|.++|..++.++++
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI  613 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMI  613 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHH
Confidence            334466778999999999988     44578999999754 233468899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh----hccC
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR----NFLF  145 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~----~~~~  145 (146)
                      +||+++|+|.+++..+.... ........++.||+.||+|    ||.|
T Consensus       614 ~EYmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~nfVH  660 (807)
T KOG1094|consen  614 TEYMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESLNFVH  660 (807)
T ss_pred             HHHHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhhchhh
Confidence            99999999999998754332 4556677899999999998    7777

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.73  E-value=4.6e-17  Score=113.16  Aligned_cols=109  Identities=20%  Similarity=0.325  Sum_probs=91.4

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcc-------cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ-------GAQEINNEVVVVAKLQHINLVRLLGFCLERE   96 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~   96 (146)
                      ..+.|...+.||+|+||.|      ..|..+|+|.+......       ....+.+|+.+|.+++||+|+.+++++..++
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d  249 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD  249 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence            3455788999999999998      67889999999643211       1234679999999999999999999999999


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ..|+|+||++||+|.+.+-.   +..+.+.....++.|++.|+.|
T Consensus       250 s~YmVlE~v~GGeLfd~vv~---nk~l~ed~~K~~f~Qll~avkY  291 (475)
T KOG0615|consen  250 SSYMVLEYVEGGELFDKVVA---NKYLREDLGKLLFKQLLTAVKY  291 (475)
T ss_pred             ceEEEEEEecCccHHHHHHh---ccccccchhHHHHHHHHHHHHH
Confidence            99999999999999999865   3446777788999999999975

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.72  E-value=1.5e-17  Score=123.17  Aligned_cols=115  Identities=20%  Similarity=0.388  Sum_probs=99.0

Q ss_pred             HHccCcccceeecccCceeecCC---------cEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           29 DATNKFSTDNKLGEGGFGVLPNE---------HEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v~~~---------~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      +..++..+.++||.|.||.|..|         ..||+|.++..- ......|+.|+.+|.+..||||+.|.|++......
T Consensus       626 Id~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~Pv  705 (996)
T KOG0196|consen  626 IDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPV  705 (996)
T ss_pred             cChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCcee
Confidence            33466889999999999999433         469999997542 33466799999999999999999999999989999


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh----hccC
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR----NFLF  145 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~----~~~~  145 (146)
                      +|++|||++|+|..||+.++.  .+.+-++..++++|+.||.|    ||.|
T Consensus       706 MIiTEyMENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLsdm~YVH  754 (996)
T KOG0196|consen  706 MIITEYMENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLSDMNYVH  754 (996)
T ss_pred             EEEhhhhhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHhhcCchh
Confidence            999999999999999997554  48889999999999999999    7777

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.70  E-value=1e-16  Score=109.82  Aligned_cols=110  Identities=19%  Similarity=0.265  Sum_probs=95.4

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ..++|.+.++||+|+||+|      ..+..+|+|++++.   ..........|..++..+.||+|++++-.|.+...+++
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            4578999999999999998      57788999999754   22235667899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+||+.||.|...|++   ...+++..+..++.+|+.||.|.
T Consensus       103 Vld~~~GGeLf~hL~~---eg~F~E~~arfYlaEi~lAL~~L  141 (357)
T KOG0598|consen  103 VLDYLNGGELFYHLQR---EGRFSEDRARFYLAEIVLALGYL  141 (357)
T ss_pred             EEeccCCccHHHHHHh---cCCcchhHHHHHHHHHHHHHHHH
Confidence            9999999999999965   45589999999999999999753

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.70  E-value=2.5e-16  Score=112.40  Aligned_cols=113  Identities=18%  Similarity=0.255  Sum_probs=94.2

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ..++|..+..||+|+||.|      ..|..+|+|.++++.   ......+..|=.+|....++++|+|+-.|.+.+.+||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            4578999999999999999      578899999997652   2345667888889999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHH----hhhccC
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDC----SRNFLF  145 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l----~~~~~~  145 (146)
                      +|||++||++..+|.+   -..+++..+..++.+.+.|+    ..+|||
T Consensus       219 iMEylPGGD~mTLL~~---~~~L~e~~arfYiaE~vlAI~~iH~~gyIH  264 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLMR---KDTLTEDWARFYIAETVLAIESIHQLGYIH  264 (550)
T ss_pred             EEEecCCccHHHHHHh---cCcCchHHHHHHHHHHHHHHHHHHHcCccc
Confidence            9999999999999965   34577877887777766655    457777

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.70  E-value=1.2e-16  Score=122.49  Aligned_cols=116  Identities=24%  Similarity=0.421  Sum_probs=97.9

Q ss_pred             HccCcccceeecccCceeecCC-----------cEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           30 ATNKFSTDNKLGEGGFGVLPNE-----------HEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~~~-----------~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      ...+..+...||+|+||.|+.|           ..||+|.+++. +.+....|.+|+.+|....||||+++.|.+.....
T Consensus       690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~  769 (1025)
T KOG1095|consen  690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP  769 (1025)
T ss_pred             ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence            3456778899999999999433           24888888654 34456789999999999999999999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCC----CCCCCChHHHHHHHHHHHHHHhh----hccC
Q 048150           98 KILVYEYVPNKRLDNFLYEPE----KQGQWDCSRRYKIIGGRGRDCSR----NFLF  145 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~i~~~i~~~l~~----~~~~  145 (146)
                      .++++|||++|+|..+|++..    ....+.-..++.++.|||+|+.|    +|+|
T Consensus       770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvH  825 (1025)
T KOG1095|consen  770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVH  825 (1025)
T ss_pred             cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcC
Confidence            999999999999999998641    24457889999999999999998    7777

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.69  E-value=4.7e-17  Score=117.61  Aligned_cols=118  Identities=20%  Similarity=0.345  Sum_probs=102.8

Q ss_pred             ccChhHHHHHccCcccceeecccCceeecCCc---EEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC
Q 048150           21 QFDFETIEDATNKFSTDNKLGEGGFGVLPNEH---EIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLER   95 (146)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~lg~g~fg~v~~~~---~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~   95 (146)
                      ..+.++|.+..+.+.+...||+|+||+|+.|.   .||||.+.....  +..+.|..|+.++++=+|.||+-+.|+|..+
T Consensus       381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP  460 (678)
T ss_pred             CccccccccCHHHhhccceeccccccceeecccccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence            34448899999999999999999999997775   799999976533  3478899999999999999999999999776


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +. .|++.+|+|.+|+.+++.  ....++...++.|+.||++||.|
T Consensus       461 ~~-AIiTqwCeGsSLY~hlHv--~etkfdm~~~idIAqQiaqGM~Y  503 (678)
T KOG0193|consen  461 PL-AIITQWCEGSSLYTHLHV--QETKFDMNTTIDIAQQIAQGMDY  503 (678)
T ss_pred             ce-eeeehhccCchhhhhccc--hhhhhhHHHHHHHHHHHHHhhhh
Confidence            66 999999999999999975  34568899999999999999976

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.69  E-value=1.6e-16  Score=112.79  Aligned_cols=109  Identities=17%  Similarity=0.274  Sum_probs=93.7

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--Ccee
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLER--EEKI   99 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~~~   99 (146)
                      ..+.|...+.||+|.||.|      ..|..||+|.+....  .+......+|+.+|+++.||||++|.+.+...  ..+|
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence            3456899999999999999      467789999997654  44466778999999999999999999998876  6799


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+|||++ +|.-++.+  ....+++.++.-++.|++.||.|
T Consensus       195 lVFeYMdh-DL~GLl~~--p~vkft~~qIKc~mkQLl~Gl~~  233 (560)
T KOG0600|consen  195 LVFEYMDH-DLSGLLSS--PGVKFTEPQIKCYMKQLLEGLEY  233 (560)
T ss_pred             EEEecccc-hhhhhhcC--CCcccChHHHHHHHHHHHHHHHH
Confidence            99999998 89888865  34568999999999999999976

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.69  E-value=3.7e-17  Score=119.30  Aligned_cols=120  Identities=23%  Similarity=0.339  Sum_probs=104.3

Q ss_pred             hhHHHHHccCcccceeecccCceeecCC------cEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           24 FETIEDATNKFSTDNKLGEGGFGVLPNE------HEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        24 ~~~~~~~~~~~~~~~~lg~g~fg~v~~~------~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      .++|.....++.-..+||-|.||.|+.|      ..||||.++ .+......|+.|+.+|+.+.|||+++|.|+|.....
T Consensus       259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLK-EDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP  337 (1157)
T KOG4278|consen  259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP  337 (1157)
T ss_pred             cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhh-hcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence            4788888888999999999999999544      578999884 344568899999999999999999999999998899


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh----hccC
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR----NFLF  145 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~----~~~~  145 (146)
                      +||++|||.+|+|.++|+.-+ ...++.-.+++++.||+.||.|    ||||
T Consensus       338 FYIiTEfM~yGNLLdYLRecn-r~ev~avvLlyMAtQIsSaMeYLEkknFIH  388 (1157)
T KOG4278|consen  338 FYIITEFMCYGNLLDYLRECN-RSEVPAVVLLYMATQISSAMEYLEKKNFIH  388 (1157)
T ss_pred             eEEEEecccCccHHHHHHHhc-hhhcchhHHHHHHHHHHHHHHHHHHhhhhh
Confidence            999999999999999998633 3346777889999999999999    8888

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.69  E-value=3.3e-16  Score=107.42  Aligned_cols=109  Identities=21%  Similarity=0.202  Sum_probs=94.8

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc-eeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE-KILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~-~~lv~e  103 (146)
                      ++....+.||+|+-|.|      ..+..+|+|.+... .+...+.+.+|+.++...+||+|+.++++|...+. +.++||
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE  158 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME  158 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence            46778899999999988      56889999999543 33346778999999999999999999999999885 999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      ||++|+|.+++..   ...+++..+..++.++++||.|.+
T Consensus       159 YMDgGSLd~~~k~---~g~i~E~~L~~ia~~VL~GL~YLh  195 (364)
T KOG0581|consen  159 YMDGGSLDDILKR---VGRIPEPVLGKIARAVLRGLSYLH  195 (364)
T ss_pred             hcCCCCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHh
Confidence            9999999999864   355899999999999999999865

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.67  E-value=1.2e-16  Score=111.66  Aligned_cols=111  Identities=16%  Similarity=0.363  Sum_probs=97.0

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ...+|.+.+.||+|.||+|      ..|..||+|.++..+-   ++.-.+.+|+.+|..++||||+.++.+|...+-+.+
T Consensus        51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi  130 (668)
T KOG0611|consen   51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI  130 (668)
T ss_pred             hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence            3456889999999999999      5678999999976533   335567899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      ||||..+|.|++++..   ...+++..+..+++||..+++|-+
T Consensus       131 vMEYaS~GeLYDYiSe---r~~LsErEaRhfFRQIvSAVhYCH  170 (668)
T KOG0611|consen  131 VMEYASGGELYDYISE---RGSLSEREARHFFRQIVSAVHYCH  170 (668)
T ss_pred             EEEecCCccHHHHHHH---hccccHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999965   456999999999999999998854

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.66  E-value=6.9e-16  Score=103.52  Aligned_cols=108  Identities=23%  Similarity=0.309  Sum_probs=92.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|.....+|.|+||.|      ..|..+|+|++....   ....+....|-+++..+.||+++.+.+.+.+...++++|
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            56888999999999998      567789999986442   223455778999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||++||.|..++++   ...++++.+..++.+|+.||.|.
T Consensus       124 eyv~GGElFS~Lrk---~~rF~e~~arFYAAeivlAleyl  160 (355)
T KOG0616|consen  124 EYVPGGELFSYLRK---SGRFSEPHARFYAAEIVLALEYL  160 (355)
T ss_pred             eccCCccHHHHHHh---cCCCCchhHHHHHHHHHHHHHHH
Confidence            99999999999975   45689999999999999988753

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.65  E-value=1e-15  Score=108.88  Aligned_cols=106  Identities=30%  Similarity=0.468  Sum_probs=85.3

Q ss_pred             CCccccccccccChh-HHHHHccCcccceeecccCceeecC-----------CcEEEEEEeccCC-cccHHHHHHHHHHH
Q 048150           11 DNDITTLESLQFDFE-TIEDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSS-SQGAQEINNEVVVV   77 (146)
Q Consensus        11 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~-~~~~~~~~~e~~~l   77 (146)
                      .++....++.+++.+ .+..+.++|...+.||+|+||.|+.           +..+|+|.+.... ....+.+.+|+.++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il   92 (375)
T cd05104          13 GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVL   92 (375)
T ss_pred             CceEEEecCCCCCCccccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHH
Confidence            345556667777665 4566777899999999999999832           3478999986432 22356688999999


Q ss_pred             hhC-CCCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcC
Q 048150           78 AKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE  116 (146)
Q Consensus        78 ~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~  116 (146)
                      ..+ .||||+++++.+...+..+++|||+++|+|.++++.
T Consensus        93 ~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~  132 (375)
T cd05104          93 SYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRR  132 (375)
T ss_pred             HHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHh
Confidence            999 899999999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.64  E-value=2.3e-15  Score=103.51  Aligned_cols=111  Identities=21%  Similarity=0.307  Sum_probs=92.8

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC--ceeEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLERE--EKILVY  102 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~--~~~lv~  102 (146)
                      ..+|...+.||+|+||.|      ..|...|+|.+........+.+.+|+.+|.+++||+||+++|......  .++++|
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            466888999999999999      336789999987553323667889999999999999999999755555  589999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      ||+++|+|.+++.+...  .+++..+..+.+||++||.|.+
T Consensus        96 Ey~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylH  134 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLH  134 (313)
T ss_pred             eccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999976432  6999999999999999998743

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=2.2e-15  Score=106.61  Aligned_cols=108  Identities=19%  Similarity=0.275  Sum_probs=91.7

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|...+.||+|+||.|      ..+..+|+|++....   ......+..|+.++..++|+|++++++.+...+.++++|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            46889999999999998      357789999986431   223455778999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        81 E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~l  117 (364)
T cd05599          81 EYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSI  117 (364)
T ss_pred             CCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999864   23488999999999999999763

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=2.2e-15  Score=105.85  Aligned_cols=119  Identities=13%  Similarity=0.154  Sum_probs=101.8

Q ss_pred             ChhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC
Q 048150           23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLER   95 (146)
Q Consensus        23 ~~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~   95 (146)
                      +-.+|....++|++.++||.|.-+.|      ..+..||+|++...+- .+...+.+|+..|..++||||++++.+|..+
T Consensus        17 ~~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~   96 (516)
T KOG0582|consen   17 SEKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD   96 (516)
T ss_pred             ccccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec
Confidence            33455667789999999999988887      5668899999975422 2368899999999999999999999999999


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..+|+||.||.+|++.+++... ....+++..+..+++++++||.|.
T Consensus        97 ~~LWvVmpfMa~GS~ldIik~~-~~~Gl~E~~Ia~iLre~LkaL~YL  142 (516)
T KOG0582|consen   97 SELWVVMPFMAGGSLLDIIKTY-YPDGLEEASIATILREVLKALDYL  142 (516)
T ss_pred             ceeEEeehhhcCCcHHHHHHHH-ccccccHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999763 344599999999999999999883

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.64  E-value=9.7e-16  Score=106.65  Aligned_cols=111  Identities=18%  Similarity=0.169  Sum_probs=94.5

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|++.+.||.|.-|.|      ..++..|+|++.+...   ........|..+|..+.||.+++|+..+.++...+++|
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            45888999999999998      3447899999975422   23456778889999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      |||+||+|..+.+. +....+++..+..++.+++-||.|.+
T Consensus       157 eyCpGGdL~~Lrqk-Qp~~~fse~~aRFYaAEvl~ALEYLH  196 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQK-QPGKRFSESAARFYAAEVLLALEYLH  196 (459)
T ss_pred             ecCCCccHHHHHhh-CCCCccchhhHHHHHHHHHHHHHHHH
Confidence            99999999998876 45666999999999999999998754

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.64  E-value=3.8e-16  Score=115.06  Aligned_cols=111  Identities=27%  Similarity=0.325  Sum_probs=94.2

Q ss_pred             HHccCcccceeecccCceeecCC---------cEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           29 DATNKFSTDNKLGEGGFGVLPNE---------HEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v~~~---------~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      +..+.+.+.+.||+|.||.|+.|         ..||||++...... ....|.+|+.+|.+++|+|++.|+|.+.+ ..+
T Consensus       107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~  185 (1039)
T KOG0199|consen  107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA  185 (1039)
T ss_pred             ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence            34455677899999999999433         26899999765444 57889999999999999999999999987 668


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .+|+|.++.|+|.+.|+. .....+....++.++.||+.||+|
T Consensus       186 mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~Y  227 (1039)
T KOG0199|consen  186 MMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQY  227 (1039)
T ss_pred             hHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHH
Confidence            899999999999999987 344568889999999999999998

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=4.8e-15  Score=105.42  Aligned_cols=107  Identities=19%  Similarity=0.205  Sum_probs=90.5

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|...+.||+|+||.|      ..+..+|+|.+....   ......+..|+.++..+.|+|++++++.+...+..+++|
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            36888999999999998      367789999985431   223456788999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++|+|.+++.+   ...+++..+..++.|++.||.|
T Consensus        81 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~  116 (377)
T cd05629          81 EFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEA  116 (377)
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999864   2347888899999999999976

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.63  E-value=7.8e-15  Score=101.39  Aligned_cols=111  Identities=24%  Similarity=0.382  Sum_probs=90.2

Q ss_pred             ccCcccceeecccCceeecC----------------------CcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeee
Q 048150           31 TNKFSTDNKLGEGGFGVLPN----------------------EHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVR   87 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~----------------------~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~   87 (146)
                      ..+|.+.+.||+|+||.|+.                      +..+|+|.+...... ....+.+|+.++..++|+|+++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            46788899999999999832                      235899998654222 3456889999999999999999


Q ss_pred             EeeEEEcCCceeEEEEecCCCCHHHhhcCCC----------------CCCCCChHHHHHHHHHHHHHHhh
Q 048150           88 LLGFCLEREEKILVYEYVPNKRLDNFLYEPE----------------KQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        88 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++...+..++++||+++|+|.+++....                ....+++..+..++.|++.||.|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~  153 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKY  153 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHH
Confidence            9999999899999999999999999885421                11246778899999999999986

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.63  E-value=7.4e-15  Score=104.61  Aligned_cols=108  Identities=17%  Similarity=0.214  Sum_probs=91.0

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      +.|...+.||+|+||.|      ..+..+|+|.+....   ......+..|+.++..++|++++++++.+...+.++++|
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~   80 (381)
T cd05626           1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (381)
T ss_pred             CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence            35788999999999999      356789999986432   223456788999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        81 E~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~L  117 (381)
T cd05626          81 DYIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESV  117 (381)
T ss_pred             ecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999864   23478888999999999999763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.63  E-value=5.4e-15  Score=100.93  Aligned_cols=101  Identities=22%  Similarity=0.320  Sum_probs=83.1

Q ss_pred             eecccCceeecCCc------------------------------EEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeE
Q 048150           39 KLGEGGFGVLPNEH------------------------------EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL   88 (146)
Q Consensus        39 ~lg~g~fg~v~~~~------------------------------~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l   88 (146)
                      .||+|+||.|+.|.                              .+++|.+..........+..++.++..++|+|++++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            58999999985542                              377887754433335567888999999999999999


Q ss_pred             eeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           89 LGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        89 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++...+..++||||+++|+|..++...  ...+++..+..++.|++.||.|
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~  132 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE--KGRVPVAWKITVAQQLASALSY  132 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999988652  3347888899999999999976

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.63  E-value=7.9e-15  Score=104.25  Aligned_cols=108  Identities=18%  Similarity=0.257  Sum_probs=91.0

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|.+.+.||+|+||.|      ..+..+|+|.+....   ......+..|+.++..+.|++++++++.+...+.++++|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            46889999999999998      356789999985321   223456788999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        81 E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~l  117 (376)
T cd05598          81 DYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESV  117 (376)
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999865   23478888899999999999763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=8.5e-15  Score=103.64  Aligned_cols=112  Identities=21%  Similarity=0.350  Sum_probs=94.1

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccC----Cc-ccHHHHHHHHHHHhhCC-CCCeeeEeeEEEcCC
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS----SS-QGAQEINNEVVVVAKLQ-HINLVRLLGFCLERE   96 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~----~~-~~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~   96 (146)
                      .....|...+.||+|+||+|      ..+..+|+|.+...    .. ...+.+.+|+.++..+. ||||+++++++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            34568999999999999998      45688999977653    11 12445668999999998 999999999999999


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      .+++||||+.+|+|.+.+.+   ...+.+..+..++.|++.|+.|-+
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H  137 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCH  137 (370)
T ss_pred             eEEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999976   345788999999999999998743

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.62  E-value=7.8e-15  Score=103.87  Aligned_cols=107  Identities=16%  Similarity=0.263  Sum_probs=90.7

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|...+.||+|+||.|      ..+..+|+|++....   ......+..|+.++..++|++++++++.+...+.++++|
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            47888999999999998      356789999986431   122456778999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|
T Consensus        81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~  116 (363)
T cd05628          81 EFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDS  116 (363)
T ss_pred             cCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999864   2358899999999999999976

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.62  E-value=9e-15  Score=99.32  Aligned_cols=109  Identities=26%  Similarity=0.414  Sum_probs=90.6

Q ss_pred             ccCcccceeecccCceeec---------CCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           31 TNKFSTDNKLGEGGFGVLP---------NEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~---------~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ..+|.+.+.||+|+||.|+         .+..+++|.+..... .....+..|+..+..++|+|++++++.+...+..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            3568889999999999983         234789998865422 224568899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +|||+++|+|.+++...  ...+++..+..++.|++.||.|
T Consensus        84 v~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~  122 (266)
T cd05064          84 VTEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKY  122 (266)
T ss_pred             EEEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999998653  2357899999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.62  E-value=1.6e-16  Score=112.12  Aligned_cols=110  Identities=19%  Similarity=0.286  Sum_probs=92.7

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHH--HHHHHHHHhhCC-CCCeeeEeeEEEcCC-cee
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQE--INNEVVVVAKLQ-HINLVRLLGFCLERE-EKI   99 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~--~~~e~~~l~~l~-h~~i~~l~~~~~~~~-~~~   99 (146)
                      .-.+|...+.||.|.||.|      ..|..||+|.++..-. ..+.  -.+|+..+.++. ||||+++.+.+.+.+ .++
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~   86 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY   86 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence            3467888999999999999      5667899999865322 3333  368999999997 999999999999988 899


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      +|||||+. +|++++..+  +..+++..+..++.||++||.|.|
T Consensus        87 fVfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiH  127 (538)
T KOG0661|consen   87 FVFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIH  127 (538)
T ss_pred             eeHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHH
Confidence            99999987 999999864  667999999999999999998643

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.61  E-value=4e-15  Score=105.82  Aligned_cols=107  Identities=28%  Similarity=0.459  Sum_probs=85.1

Q ss_pred             CCCccccccccccChh-HHHHHccCcccceeecccCceeecC------C-----cEEEEEEeccCC-cccHHHHHHHHHH
Q 048150           10 ADNDITTLESLQFDFE-TIEDATNKFSTDNKLGEGGFGVLPN------E-----HEIAVKRLSRSS-SQGAQEINNEVVV   76 (146)
Q Consensus        10 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~g~fg~v~~------~-----~~~a~k~~~~~~-~~~~~~~~~e~~~   76 (146)
                      +....+..++.+.+.. .|....++|...+.||+|+||.|+.      +     ..+|+|.+.... ......+..|+.+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~i   94 (374)
T cd05106          15 EGNNYTFIDPTQLPYNEKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKI   94 (374)
T ss_pred             cCCcceeeCCccccccccccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHH
Confidence            3445556666666643 5667778899999999999998842      2     369999986542 2234567899999


Q ss_pred             HhhC-CCCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcC
Q 048150           77 VAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE  116 (146)
Q Consensus        77 l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~  116 (146)
                      +..+ +|+|++++++.+...+..+++|||+++|+|.+++..
T Consensus        95 l~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~  135 (374)
T cd05106          95 LSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRK  135 (374)
T ss_pred             HHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHh
Confidence            9999 899999999999999999999999999999998853

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.61  E-value=3.7e-15  Score=105.55  Aligned_cols=109  Identities=18%  Similarity=0.227  Sum_probs=92.5

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCccc--HHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc-eeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQG--AQEINNEVVVVAKLQHINLVRLLGFCLEREE-KILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~-~~lv~  102 (146)
                      ++|..++.+|+|+||.+      ..+..+++|.+.......  ......|+.++.++.||||+.+.+.|...+. ++|+|
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            56888999999999976      455678999987553332  4467789999999999999999999998888 99999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +||+||++.+.|... +...+++..+..++.|++.|+.|
T Consensus        84 ~Y~eGg~l~~~i~~~-k~~~f~E~~i~~~~~Q~~~av~y  121 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQ-KGVLFPEERILKWFVQILLAVNY  121 (426)
T ss_pred             eecCCCCHHHHHHHH-hhccccHHHHHHHHHHHHHHHHH
Confidence            999999999999763 35669999999999999999865

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.61  E-value=6e-15  Score=99.91  Aligned_cols=106  Identities=34%  Similarity=0.536  Sum_probs=86.5

Q ss_pred             ccceeecccCceeec----C------CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           35 STDNKLGEGGFGVLP----N------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        35 ~~~~~lg~g~fg~v~----~------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      +..+.||.|+||.|.    .      +..|++|.+.... ......+..|+..+..++|+|++++++++...+.+++++|
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence            356889999999982    2      4578999996432 2346789999999999999999999999998888999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+++|+|.+++... ....+++..+..++.|++.||.|
T Consensus        82 ~~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~  118 (259)
T PF07714_consen   82 YCPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSY  118 (259)
T ss_dssp             --TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccc-ccccccccccccccccccccccc
Confidence            99999999999763 23458999999999999999987

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.61  E-value=5.7e-15  Score=105.84  Aligned_cols=100  Identities=27%  Similarity=0.468  Sum_probs=79.4

Q ss_pred             ccccccChh-HHHHHccCcccceeecccCceeecCC-----------cEEEEEEeccCC-cccHHHHHHHHHHHhhCC-C
Q 048150           17 LESLQFDFE-TIEDATNKFSTDNKLGEGGFGVLPNE-----------HEIAVKRLSRSS-SQGAQEINNEVVVVAKLQ-H   82 (146)
Q Consensus        17 ~~~~~~~~~-~~~~~~~~~~~~~~lg~g~fg~v~~~-----------~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~-h   82 (146)
                      .++.+++.. .|..+.++|.+.+.||+|+||.|+.+           ..+|+|.+.... ....+.+..|+.++..+. |
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~H  100 (400)
T cd05105          21 VDPMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPH  100 (400)
T ss_pred             eccccCCCCCceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCC
Confidence            344455443 45666788999999999999998432           258999986432 223567889999999995 9


Q ss_pred             CCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcC
Q 048150           83 INLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE  116 (146)
Q Consensus        83 ~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~  116 (146)
                      |||+++++++...+.++++|||+++|+|.+++..
T Consensus       101 pnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~  134 (400)
T cd05105         101 LNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHK  134 (400)
T ss_pred             CCeeeEEEEEccCCceEEEEEecCCCcHHHHHHH
Confidence            9999999999988999999999999999988753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.61  E-value=5.1e-15  Score=98.08  Aligned_cols=109  Identities=18%  Similarity=0.350  Sum_probs=93.4

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCccc--HHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQG--AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      .+|...+++|+|.||.|      ..|+.||+|.++.....+  .-...+|+.+++.++|+||+.+.++|-....+.||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            46778899999999998      567899999997653332  3457899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      |++. +|+..+++  ....+....+..++.++.+|+.|-+
T Consensus        82 fm~t-dLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H  118 (318)
T KOG0659|consen   82 FMPT-DLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCH  118 (318)
T ss_pred             eccc-cHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHH
Confidence            9998 99999986  3445888999999999999998744

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.61  E-value=1.3e-14  Score=103.31  Aligned_cols=107  Identities=19%  Similarity=0.261  Sum_probs=89.8

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      +.|...+.||+|+||.|      ..+..+|+|.+....   ......+..|+.++..+.|++++++++.+...+.+++||
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~   80 (382)
T cd05625           1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM   80 (382)
T ss_pred             CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence            35888999999999998      356789999986431   122456788999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|
T Consensus        81 E~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~  116 (382)
T cd05625          81 DYIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVES  116 (382)
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999864   2347888899999999999976

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.60  E-value=1.3e-14  Score=101.44  Aligned_cols=109  Identities=17%  Similarity=0.223  Sum_probs=91.8

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ..+|...+.||+|+||.|      ..+..+|+|.+...   .......+..|+.++..++|+|++++++.+...+..+++
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   96 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL   96 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence            367889999999999998      35678999998643   122345678999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+++|+|.+.+.+   ...+++..+..++.|++.||.|.
T Consensus        97 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~L  134 (329)
T PTZ00263         97 LEFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYL  134 (329)
T ss_pred             EcCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999865   23478888999999999999763

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=2e-14  Score=98.57  Aligned_cols=109  Identities=20%  Similarity=0.220  Sum_probs=89.6

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      +|+..+.||+|+||.|      ..+..+|+|.+.....   .....+.+|+.++..++|++++++++.+..++.++++||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            4778899999999998      3567899999864321   123456789999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus        81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l  118 (285)
T cd05605          81 LMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDL  118 (285)
T ss_pred             ccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999888642 234588999999999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.60  E-value=5.2e-15  Score=108.38  Aligned_cols=112  Identities=19%  Similarity=0.197  Sum_probs=92.7

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCc
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREE   97 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~   97 (146)
                      .....+|.+.++||+|+||+|      ..+..+|+|++++.   ..........|-+++..+ +||.++.++.+|.+.++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            445578999999999999999      45678999999765   233466778888888877 69999999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      +++||||+.||++..+.    ....+++..+..++..|+.||.|.+
T Consensus       444 l~fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH  485 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLH  485 (694)
T ss_pred             EEEEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999944333    2345899999999999999998654

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.60  E-value=4.8e-15  Score=103.86  Aligned_cols=90  Identities=26%  Similarity=0.486  Sum_probs=72.1

Q ss_pred             HHHHccCcccceeecccCceeecC-----------CcEEEEEEeccCC-cccHHHHHHHHHHHhhC-CCCCeeeEeeEEE
Q 048150           27 IEDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKL-QHINLVRLLGFCL   93 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~   93 (146)
                      |..+.++|.+.+.||+|+||.|+.           +..+|+|.+.... ......+..|+.++..+ +|+||+++++.+.
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (338)
T cd05102           2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT   81 (338)
T ss_pred             cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence            345567899999999999999932           2468999986432 22345688999999999 8999999999887


Q ss_pred             cCC-ceeEEEEecCCCCHHHhhcC
Q 048150           94 ERE-EKILVYEYVPNKRLDNFLYE  116 (146)
Q Consensus        94 ~~~-~~~lv~e~~~~g~L~~~l~~  116 (146)
                      ..+ .++++|||+++|+|.+++..
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~l~~  105 (338)
T cd05102          82 KPNGPLMVIVEFCKYGNLSNFLRA  105 (338)
T ss_pred             CCCCceEEEEecCCCCcHHHHHHh
Confidence            654 58899999999999998864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.60  E-value=2.4e-14  Score=100.20  Aligned_cols=109  Identities=20%  Similarity=0.155  Sum_probs=92.5

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      .++|...+.||+|+||.|      ..+..+++|.+.... ......+.+|+.++..++|+|++++++++...+.++++||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            467899999999999988      356789999986542 2234678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~l  119 (331)
T cd06649          84 HMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYL  119 (331)
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999864   23478889999999999999763

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.60  E-value=7.4e-15  Score=107.52  Aligned_cols=107  Identities=23%  Similarity=0.360  Sum_probs=94.5

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .-|++++.||+|+-|.|      ..|..+|+|.+..+.   ......+-+|+.+|+.+.|||++.+++++....++|+|.
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            45889999999999998      678899999997652   122567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++|.|.+++..   .++++++.+..++.||+.|+.|
T Consensus        92 Eyv~gGELFdylv~---kG~l~e~eaa~ff~QIi~gv~y  127 (786)
T KOG0588|consen   92 EYVPGGELFDYLVR---KGPLPEREAAHFFRQILDGVSY  127 (786)
T ss_pred             EecCCchhHHHHHh---hCCCCCHHHHHHHHHHHHHHHH
Confidence            99999999999965   4568999999999999999987

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=2e-14  Score=100.66  Aligned_cols=108  Identities=15%  Similarity=0.112  Sum_probs=90.3

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|.+.+.||+|+||.|      ..+..+|+|.+...   .......+..|..++..+.|++++++++++...+.+++++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            46888999999999988      35678999998642   1223455778889999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++|+|.+++...  ...+++..+..++.|++.||.|
T Consensus        81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~  117 (331)
T cd05597          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDS  117 (331)
T ss_pred             ecCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999998642  3347888999999999999975

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=1.2e-14  Score=99.31  Aligned_cols=110  Identities=15%  Similarity=0.198  Sum_probs=94.6

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      +.++|.+.+.||.|+||.|      ..+..+++|.+..........+..|+.++..++|++++++++.+...+..++++|
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            4567889999999999988      3467899999875544456678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+++++|.+++...  ...+++..+..++.|++.||.|
T Consensus        83 ~~~~~~L~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~  118 (280)
T cd06611          83 FCDGGALDSIMLEL--ERGLTEPQIRYVCRQMLEALNF  118 (280)
T ss_pred             ccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999998653  2348899999999999999976

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=2e-14  Score=100.69  Aligned_cols=108  Identities=20%  Similarity=0.271  Sum_probs=91.0

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .+|.+.+.||+|+||.|      ..+..+|+|++....   ......+..|+.++..+.|+|++++++.+...+..+++|
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            36888999999999998      356789999986431   223456788999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        81 e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~l  117 (333)
T cd05600          81 EYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDAL  117 (333)
T ss_pred             eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999964   23478889999999999999863

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=7.6e-15  Score=100.99  Aligned_cols=108  Identities=21%  Similarity=0.277  Sum_probs=90.5

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|...+.||+|+||.|      ..+..+|+|.+....   ......+.+|+.++..+.||||+++++.+...+.++++|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            36888999999999998      357789999986432   123456788999999999999999999998889999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++.+   ...+++.....++.|++.||.|.
T Consensus        81 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~l  117 (291)
T cd05612          81 EYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYL  117 (291)
T ss_pred             eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999865   23478888999999999999763

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.60  E-value=1.8e-14  Score=101.34  Aligned_cols=110  Identities=19%  Similarity=0.199  Sum_probs=91.2

Q ss_pred             HccCcccceeecccCceeec-------CCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           30 ATNKFSTDNKLGEGGFGVLP-------NEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~-------~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ...+|...+.||+|+||.|+       .+..+|+|.+...   .......+..|+.++..++|||++++++++...+.++
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~  107 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY  107 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence            44578899999999999882       1247899988543   1223456788999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus       108 lv~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~L  147 (340)
T PTZ00426        108 LVLEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYL  147 (340)
T ss_pred             EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999964   23578889999999999999763

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.59  E-value=3.9e-14  Score=97.15  Aligned_cols=109  Identities=20%  Similarity=0.215  Sum_probs=89.5

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      .|...+.||+|+||.|      ..+..+|+|.+.....   .....+..|+.++..+.|++++++.+.+...+.+++++|
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            3677899999999998      4577899999864321   123456789999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++|+|...+... ....+++..+..++.|++.||.|.
T Consensus        81 ~~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l  118 (285)
T cd05631          81 IMNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDL  118 (285)
T ss_pred             ecCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999998887542 233588999999999999999763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.59  E-value=9.2e-15  Score=98.77  Aligned_cols=113  Identities=23%  Similarity=0.335  Sum_probs=95.5

Q ss_pred             HHccCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           29 DATNKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ....+|...+.||.|+||.|+     .+..+++|.+..........+..|+.++..++|++++++++.+...+..++++|
T Consensus         3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (261)
T cd05148           3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE   82 (261)
T ss_pred             CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence            345678889999999999983     356789999876554456778899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++++|.+++.+.. ...+++..+..++.+++.||.|.
T Consensus        83 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~l  120 (261)
T cd05148          83 LMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYL  120 (261)
T ss_pred             ecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999997632 34578999999999999999763

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.59  E-value=3.5e-14  Score=99.50  Aligned_cols=109  Identities=19%  Similarity=0.167  Sum_probs=92.0

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      .++|...+.||+|+||.|      ..+..+++|.+.... ......+.+|+.++..++|+||+++++++...+.+++++|
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            467899999999999998      356678999876542 2234568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++|+|.+++..   ...+++..+..++.+++.||.|.
T Consensus        84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~l  119 (333)
T cd06650          84 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYL  119 (333)
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999864   23478888999999999999763

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.59  E-value=1.5e-14  Score=103.67  Aligned_cols=99  Identities=25%  Similarity=0.485  Sum_probs=78.8

Q ss_pred             cccccChh-HHHHHccCcccceeecccCceeecCC-----------cEEEEEEeccCCc-ccHHHHHHHHHHHhhCC-CC
Q 048150           18 ESLQFDFE-TIEDATNKFSTDNKLGEGGFGVLPNE-----------HEIAVKRLSRSSS-QGAQEINNEVVVVAKLQ-HI   83 (146)
Q Consensus        18 ~~~~~~~~-~~~~~~~~~~~~~~lg~g~fg~v~~~-----------~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~-h~   83 (146)
                      ++.++..+ +|..+.+++.+.+.||+|+||.|+.+           ..+|+|.+..... .....+..|+.++..+. |+
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~  101 (401)
T cd05107          22 DPMQLPYDSAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHL  101 (401)
T ss_pred             CCCCCCCCCcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCC
Confidence            44444432 56677778889999999999998322           3699999965422 22456889999999996 99


Q ss_pred             CeeeEeeEEEcCCceeEEEEecCCCCHHHhhcC
Q 048150           84 NLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE  116 (146)
Q Consensus        84 ~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~  116 (146)
                      |++++++.+...+..++++||+++|+|.+++..
T Consensus       102 niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~  134 (401)
T cd05107         102 NIVNLLGACTKGGPIYIITEYCRYGDLVDYLHR  134 (401)
T ss_pred             CeEEEEEEEccCCCcEEEEeccCCCcHHHHHHh
Confidence            999999999998899999999999999998854

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.59  E-value=3.9e-14  Score=100.22  Aligned_cols=107  Identities=16%  Similarity=0.258  Sum_probs=90.4

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|...+.||+|+||.|      ..+..+|+|.+...   .......+..|..++..+.|++++++++.+...+.++++|
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            36888999999999998      35778999998642   1223456778999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++|+|.+++.+   ...+++..+..++.|++.||.|
T Consensus        81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~  116 (360)
T cd05627          81 EFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDA  116 (360)
T ss_pred             eCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999864   2347889999999999999976

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.59  E-value=4.4e-14  Score=97.91  Aligned_cols=108  Identities=21%  Similarity=0.178  Sum_probs=90.5

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++|...+.||+|+||.|      ..+..+++|.+.... ......+..|+.++..++|+|++++++.+...+.+++++||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            36888999999999988      345678888876432 22345678899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++|.+++...   ..+++..+..++.|++.||.|.
T Consensus        81 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~l  115 (308)
T cd06615          81 MDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYL  115 (308)
T ss_pred             cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999998642   4478889999999999999763

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.59  E-value=8.3e-17  Score=107.44  Aligned_cols=112  Identities=18%  Similarity=0.267  Sum_probs=91.3

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEee-EEEcCCc-ee
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLG-FCLEREE-KI   99 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~-~~~~~~~-~~   99 (146)
                      ...+|.+.++||+|+||.|      ..|..+|.|.+.-.  .....+.+..|+.+|++++||||+++++ .+...+. ++
T Consensus        17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln   96 (375)
T KOG0591|consen   17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN   96 (375)
T ss_pred             cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence            4456788999999999988      67788898887622  2334677899999999999999999987 5555555 89


Q ss_pred             EEEEecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhh
Q 048150          100 LVYEYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+||+|..|+|.+.++.. .....++++.+++++.|++.||..
T Consensus        97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~  139 (375)
T KOG0591|consen   97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYH  139 (375)
T ss_pred             HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHH
Confidence            999999999999999742 234458999999999999999864

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.58  E-value=2.8e-14  Score=98.03  Aligned_cols=114  Identities=18%  Similarity=0.212  Sum_probs=95.7

Q ss_pred             HHHHHccCcccceeecccCceeec------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      .+..+.+.|++.+.||.|+||.|+      .+..+++|.+..........+..|+.++..+.|+|++++.+.+...+.++
T Consensus         6 ~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (292)
T cd06644           6 RDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLW   85 (292)
T ss_pred             cccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEE
Confidence            334456779999999999999983      46789999987555445677888999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++|||+++++|..++.+.  ...+++..+..++.|++.+|.|
T Consensus        86 lv~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~  125 (292)
T cd06644          86 IMIEFCPGGAVDAIMLEL--DRGLTEPQIQVICRQMLEALQY  125 (292)
T ss_pred             EEEecCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999998887542  2347889999999999999975

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.58  E-value=4e-15  Score=107.58  Aligned_cols=107  Identities=21%  Similarity=0.265  Sum_probs=93.1

Q ss_pred             cCcccceeecccCceeecCCc------EEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVLPNEH------EIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~~~~------~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ++|.+.+.||+|+||.|++|.      .||+|.+.+.+.  .....+.+|+++++.++||||+.++++|++..++|+|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            467888999999999996654      689999976533  236678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+.+ +|...+.+   +..+++..+..++.+++.||.|.
T Consensus        82 ~a~g-~L~~il~~---d~~lpEe~v~~~a~~LVsaL~yL  116 (808)
T KOG0597|consen   82 YAVG-DLFTILEQ---DGKLPEEQVRAIAYDLVSALYYL  116 (808)
T ss_pred             hhhh-hHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHH
Confidence            9988 99999975   45589999999999999999764

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.58  E-value=3.3e-15  Score=101.04  Aligned_cols=110  Identities=17%  Similarity=0.313  Sum_probs=96.8

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      +.+-|.+++.||+|+||.|      ..|..+|+|.++.  ..+.+.+.+|+.+|.++.++++++++|.+.-...+|+|||
T Consensus        31 PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME  108 (502)
T KOG0574|consen   31 PEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME  108 (502)
T ss_pred             hHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence            3345778899999999988      6788999999863  3478999999999999999999999999998889999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      ||..|++.+.++-  ++..+.+..+..+++..+.||.|.+
T Consensus       109 YCGAGSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH  146 (502)
T KOG0574|consen  109 YCGAGSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLH  146 (502)
T ss_pred             hcCCCcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHH
Confidence            9999999999975  4556999999999999999998753

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.58  E-value=2.4e-15  Score=98.20  Aligned_cols=113  Identities=25%  Similarity=0.378  Sum_probs=94.4

Q ss_pred             HccCcccceeecccCceeec------CCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ..++|..++.||+|.||.|+      .+-.+|+|++.++   .......+.+|+.+-..++||||++++++|.+...+||
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL   99 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL   99 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence            34778899999999999993      4457999998644   12224457789999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      ++||.+.|++...++. .....+++.....++.|++.||.|-+
T Consensus       100 ilEya~~gel~k~L~~-~~~~~f~e~~~a~Yi~q~A~Al~y~h  141 (281)
T KOG0580|consen  100 ILEYAPRGELYKDLQE-GRMKRFDEQRAATYIKQLANALLYCH  141 (281)
T ss_pred             EEEecCCchHHHHHHh-cccccccccchhHHHHHHHHHHHHhc
Confidence            9999999999999975 34556889999999999999998743

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.58  E-value=8.7e-15  Score=103.97  Aligned_cols=116  Identities=16%  Similarity=0.124  Sum_probs=94.7

Q ss_pred             ChhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEE
Q 048150           23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCL   93 (146)
Q Consensus        23 ~~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~   93 (146)
                      .+..+....++|...+.||+|+||.|      ..+..+|+|.+...   .......+..|..++..++||+++++++.+.
T Consensus        34 ~~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~  113 (371)
T cd05622          34 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ  113 (371)
T ss_pred             HHhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            34445556688999999999999998      35678999998532   1122445778899999999999999999999


Q ss_pred             cCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           94 EREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        94 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..+.++++|||+++|+|.+++..    ..++...+..++.|++.||.|.
T Consensus       114 ~~~~~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~L  158 (371)
T cd05622         114 DDRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAI  158 (371)
T ss_pred             cCCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999854    2377888999999999999763

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.57  E-value=5.6e-14  Score=98.37  Aligned_cols=108  Identities=17%  Similarity=0.108  Sum_probs=89.5

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|.+.+.||+|+||.|      ..+..+|+|.+....   ......+..|..++..+.|++++.+++++...+..+++|
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46889999999999988      356689999986421   112345678888999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++|+|.+++...  ...+++..+..++.|++.||.|
T Consensus        81 Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~  117 (331)
T cd05624          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHS  117 (331)
T ss_pred             eCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999652  2347888899999999999976

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.57  E-value=8e-14  Score=94.54  Aligned_cols=108  Identities=19%  Similarity=0.254  Sum_probs=91.6

Q ss_pred             ccCcccceeecccCceeec------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ..+|.+.+.||+|+||.|+      .+..+++|.+..........+..|+.++..++|++++++++.+...+..++++||
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            4578999999999999983      4567999998654433455677899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++|.+++..   ...+++..+..++.|++.||.|
T Consensus        88 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~  121 (267)
T cd06646          88 CGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAY  121 (267)
T ss_pred             CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHH
Confidence            999999998854   2357889999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.57  E-value=2.7e-14  Score=101.47  Aligned_cols=111  Identities=16%  Similarity=0.149  Sum_probs=92.0

Q ss_pred             HHHHccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           27 IEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      .....++|...+.||+|+||.|      ..+..+|+|.+...   .......+..|+.++..+.||+++++++.+...+.
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY  117 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            3344577999999999999998      35678999998532   12234457789999999999999999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++|||+++|+|.+++..    ..+++..+..++.|++.||.|
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~  157 (370)
T cd05621         118 LYMVMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDA  157 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999854    237888899999999999976

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.57  E-value=1.9e-14  Score=102.17  Aligned_cols=110  Identities=17%  Similarity=0.132  Sum_probs=90.9

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ...++|...+.||+|+||.|      ..+..+|+|.+...   .......+..|+.++..++|++++++++++...+.++
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~  119 (370)
T cd05596          40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY  119 (370)
T ss_pred             CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            34467999999999999998      35678999998642   1223345778999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++|+|.+++.+    ..++...+..++.|++.||.|.
T Consensus       120 lv~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~L  158 (370)
T cd05596         120 MVMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAI  158 (370)
T ss_pred             EEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999998854    2367788889999999999763

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.57  E-value=7.4e-14  Score=94.22  Aligned_cols=108  Identities=24%  Similarity=0.396  Sum_probs=89.5

Q ss_pred             cCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           32 NKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      ++|...+.||+|+||.|+     .+..+++|.+... ......+..|+.++..++|+|++++++++...+..+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            457788999999999883     3457899987533 2235678889999999999999999999999999999999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|+|.+++...  ...+++..+..++.+++.||.|.
T Consensus        83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~l  116 (256)
T cd05114          83 NGCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYL  116 (256)
T ss_pred             CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            99999998642  23478899999999999999763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.57  E-value=5.2e-14  Score=99.88  Aligned_cols=111  Identities=23%  Similarity=0.335  Sum_probs=95.9

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccCCcc---cHHHHHHHHHHHhhCC-CCCeeeEeeEEEcCCc
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ---GAQEINNEVVVVAKLQ-HINLVRLLGFCLEREE   97 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~---~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~~   97 (146)
                      ......|.+.+.||+|.||.|      ..|..+|+|.+.+....   ....+.+|+.+|..+. |||++.+.+.+.+...
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~  110 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS  110 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence            334567888999999999998      45889999999755332   3468999999999997 9999999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .++|||++.||.|.+.+...    .+++..+..++.|++.++.|.
T Consensus       111 ~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~l  151 (382)
T KOG0032|consen  111 VYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYL  151 (382)
T ss_pred             EEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999764    389999999999999999753

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.57  E-value=5.1e-14  Score=97.38  Aligned_cols=131  Identities=23%  Similarity=0.325  Sum_probs=99.8

Q ss_pred             CCccccccccccChh-HHHHHccCcccceeecccCceeecC-----------CcEEEEEEeccCC-cccHHHHHHHHHHH
Q 048150           11 DNDITTLESLQFDFE-TIEDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSS-SQGAQEINNEVVVV   77 (146)
Q Consensus        11 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~-~~~~~~~~~e~~~l   77 (146)
                      .......++...+.+ .+....++|...+.||+|+||.|+.           +..+|+|.+.... ......+..|+.++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l   92 (302)
T cd05055          13 GNEYVYIDPTQLPYDLKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIM   92 (302)
T ss_pred             CccccccCcccccccccccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHH
Confidence            334444444444332 3445556799999999999998832           2368888876442 22346688999999


Q ss_pred             hhC-CCCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           78 AKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        78 ~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .++ +|+|++++++.+...+.+++++||+++|+|.+++.... ...+++..+..++.+++.||.|.
T Consensus        93 ~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~l  157 (302)
T cd05055          93 SHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFL  157 (302)
T ss_pred             HhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence            999 79999999999999999999999999999999986522 23379999999999999999763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.57  E-value=3.4e-14  Score=96.30  Aligned_cols=106  Identities=20%  Similarity=0.313  Sum_probs=89.0

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCc------ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS------QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      +|...+.||+|++|.|      ..+..+++|.+.....      .....+..|+.++..++|++++++++.+...+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            4677889999999988      3567899999864321      124567889999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++||+++++|.+++.+   ...+++..+..++.|++.||.|
T Consensus        81 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~  118 (268)
T cd06630          81 FVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSY  118 (268)
T ss_pred             EEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999864   2357888999999999999965

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.57  E-value=9.3e-15  Score=99.69  Aligned_cols=113  Identities=19%  Similarity=0.253  Sum_probs=93.6

Q ss_pred             HHHHccCcccceeecccCceeec------CCcEEEEEEeccCCccc--HHHHHHHHHHHhhCCCCCeeeEeeEEEcC--C
Q 048150           27 IEDATNKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSSSQG--AQEINNEVVVVAKLQHINLVRLLGFCLER--E   96 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~   96 (146)
                      .+...++|..++.|++|.||.|+      .+..||+|+++......  .-...+|+.++.+++||||+.+...+...  +
T Consensus        71 gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d  150 (419)
T KOG0663|consen   71 GCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMD  150 (419)
T ss_pred             CcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccc
Confidence            36667789999999999999993      45689999998664333  44568999999999999999998888754  5


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+|+|||||++ +|..++.+  ....+.......+..|++.|+.|.
T Consensus       151 ~iy~VMe~~Eh-DLksl~d~--m~q~F~~~evK~L~~QlL~glk~l  193 (419)
T KOG0663|consen  151 KIYIVMEYVEH-DLKSLMET--MKQPFLPGEVKTLMLQLLRGLKHL  193 (419)
T ss_pred             eeeeeHHHHHh-hHHHHHHh--ccCCCchHHHHHHHHHHHHHHHHH
Confidence            69999999998 99999965  334688889999999999999763

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.57  E-value=5.8e-14  Score=95.23  Aligned_cols=103  Identities=20%  Similarity=0.275  Sum_probs=84.0

Q ss_pred             eeecccCceeecCCc------------------EEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           38 NKLGEGGFGVLPNEH------------------EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        38 ~~lg~g~fg~v~~~~------------------~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      +.||+|+||.|+.+.                  .+++|.+..........+..++.++..+.|||++++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            358999999985442                  47888875544444567788889999999999999999999888899


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++|+|..++...  ...+++..+..++.|++.||.|.
T Consensus        81 lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~l  121 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRK--SDVLTTPWKFKVAKQLASALSYL  121 (262)
T ss_pred             EEEecccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHh
Confidence            999999999998888642  33478889999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>PHA02988 hypothetical protein; Provisional

Probab=99.57  E-value=1e-13  Score=95.17  Aligned_cols=103  Identities=13%  Similarity=0.221  Sum_probs=85.3

Q ss_pred             eeecccCceee----cCCcEEEEEEeccCCccc---HHHHHHHHHHHhhCCCCCeeeEeeEEEc----CCceeEEEEecC
Q 048150           38 NKLGEGGFGVL----PNEHEIAVKRLSRSSSQG---AQEINNEVVVVAKLQHINLVRLLGFCLE----REEKILVYEYVP  106 (146)
Q Consensus        38 ~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~l~~~~~~----~~~~~lv~e~~~  106 (146)
                      ..+++|+++.|    ..|..+|+|.+.......   ...+.+|+.++.+++|||++++++++..    ....++++||++
T Consensus        26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~  105 (283)
T PHA02988         26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCT  105 (283)
T ss_pred             eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCC
Confidence            67899999988    567789999986543322   4567799999999999999999999876    346889999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      +|+|.+++.+.   ..+++.....++.+++.||.|.+
T Consensus       106 ~g~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lH  139 (283)
T PHA02988        106 RGYLREVLDKE---KDLSFKTKLDMAIDCCKGLYNLY  139 (283)
T ss_pred             CCcHHHHHhhC---CCCChhHHHHHHHHHHHHHHHHH
Confidence            99999999652   35788889999999999998654

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.56  E-value=5.2e-14  Score=98.42  Aligned_cols=108  Identities=18%  Similarity=0.198  Sum_probs=91.0

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|...+.||+|+||.|      ..+..+|+|.+....   ......+..|+.++..+.|++++++.+.+...+.++++|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            36888999999999998      367789999986432   123456778899999999999999999999889999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++|+|.+++...  ...+++..+..++.|++.||.|
T Consensus        81 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~  117 (330)
T cd05601          81 EYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHS  117 (330)
T ss_pred             CCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999753  2358899999999999999976

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.56  E-value=5.4e-14  Score=98.18  Aligned_cols=102  Identities=19%  Similarity=0.123  Sum_probs=84.9

Q ss_pred             eeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNK  108 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g  108 (146)
                      +.||+|+||.|      ..|..+|+|.+...   .......+..|+.++..++|||++++.+.+...+.++++|||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            36899999998      35778999998643   1223455678999999999999999999999999999999999999


Q ss_pred             CHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          109 RLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       109 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|...+..   ...+++..+..++.|++.||.|.
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~L  111 (323)
T cd05595          81 ELFFHLSR---ERVFTEERARFYGAEIVSALEYL  111 (323)
T ss_pred             cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99988854   23578899999999999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=3.6e-14  Score=99.83  Aligned_cols=108  Identities=21%  Similarity=0.244  Sum_probs=91.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|...+.||+|+||.|      ..+..+|+|.+....   ......+..|+.++..+.|++++++++.+...+..+++|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            36888999999999998      357789999986431   233556788999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++...   ..+++..+..++.|++.||.|.
T Consensus        81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~L  117 (350)
T cd05573          81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSV  117 (350)
T ss_pred             cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999998652   4588899999999999999763

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.56  E-value=9.5e-14  Score=95.00  Aligned_cols=108  Identities=24%  Similarity=0.430  Sum_probs=89.6

Q ss_pred             cCcccceeecccCceeec----------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--Ccee
Q 048150           32 NKFSTDNKLGEGGFGVLP----------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER--EEKI   99 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~----------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~~~   99 (146)
                      .+|+..+.||+|+||.|+          .+..+++|.+..........+..|+.++..++|+|++++.+++...  ..++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            468889999999999983          3567999998765544566788999999999999999999887543  4688


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++||+++|+|.+++.+.  ...+++..+..++.|++.||.|
T Consensus        84 lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~  123 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEY  123 (284)
T ss_pred             EEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999998642  2347899999999999999976

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.56  E-value=1.6e-13  Score=92.43  Aligned_cols=108  Identities=16%  Similarity=0.236  Sum_probs=91.1

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|+..+.||.|+||.|      ..+..+++|.+....  ......+..|+.++.+++|+|++++++++...+.+++++||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            4778899999999976      457789999876432  33356688999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++|.+++.... ...+++..+..++.|++.+|.|
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~  116 (256)
T cd08221          81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSY  116 (256)
T ss_pred             cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHH
Confidence            99999999997532 3457899999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.56  E-value=8.7e-14  Score=97.20  Aligned_cols=106  Identities=13%  Similarity=0.142  Sum_probs=86.1

Q ss_pred             cceeeccc--Cceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           36 TDNKLGEG--GFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        36 ~~~~lg~g--~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      +.++||+|  +|+.|      ..|..+|+|.+.....  .....+..|+.++..++||||+++++++...+..++++||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            45789999  56666      4567899999864422  22456778999999999999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|+|.+++.... ...+++..+..++.|++.||.|.
T Consensus        82 ~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~L  117 (327)
T cd08227          82 AYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYI  117 (327)
T ss_pred             CCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999986532 23478899999999999999763

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.56  E-value=8.3e-14  Score=93.91  Aligned_cols=110  Identities=25%  Similarity=0.353  Sum_probs=94.0

Q ss_pred             HccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           30 ATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      ..++|...+.+|.|+||.|    ..|..+++|.+..... ..+.+..|+.++..++|+|++++++.+...+..++++||+
T Consensus         4 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           4 NSKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             ChhhccceeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            3467888999999999988    4678899999865433 4677889999999999999999999998888999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++|.+++.... ...+++..+..++.|++.||.|
T Consensus        83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~  117 (256)
T cd05039          83 AKGSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEY  117 (256)
T ss_pred             CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999996532 2258899999999999999976

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.56  E-value=7.2e-14  Score=97.53  Aligned_cols=102  Identities=19%  Similarity=0.117  Sum_probs=85.2

Q ss_pred             eeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNK  108 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g  108 (146)
                      +.||+|+||.|      ..|..+|+|.+....   ......+..|+.++..+.|+|++++.+.+...+.++++|||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            36899999998      457789999986431   223455778999999999999999999999999999999999999


Q ss_pred             CHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          109 RLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       109 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|.+.+..   ...+++..+..++.|++.||.|.
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~l  111 (323)
T cd05571          81 ELFFHLSR---ERVFSEDRARFYGAEIVSALGYL  111 (323)
T ss_pred             cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99998864   33578999999999999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.55  E-value=6.2e-14  Score=94.76  Aligned_cols=112  Identities=24%  Similarity=0.307  Sum_probs=92.5

Q ss_pred             HHccCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           29 DATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ...++|++.+.||+|+||.|     ..+..+++|.+.... ...+.+..|+.++..++|+|++++++.+...+..++++|
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (261)
T cd05072           3 IPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE   81 (261)
T ss_pred             CchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence            34567899999999999998     344568999875432 245678899999999999999999999988889999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++|+|.+++... ....+++..+..++.+++.||.|.
T Consensus        82 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~L  119 (261)
T cd05072          82 YMAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYI  119 (261)
T ss_pred             cCCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999998653 234578888999999999999754

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.55  E-value=1e-13  Score=93.62  Aligned_cols=108  Identities=27%  Similarity=0.408  Sum_probs=89.9

Q ss_pred             cCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           32 NKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      ++|...+.||+|+||.|+     .+..+++|.+.... .....+..|+.++..++|||++++++++...+..++++||+.
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            467888999999999983     23358999886432 235668899999999999999999999988888999999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|+|.+++....  ..+++..+..++.|++.||.|.
T Consensus        83 ~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~l  116 (256)
T cd05113          83 NGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYL  116 (256)
T ss_pred             CCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHH
Confidence            999999986522  2578999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.55  E-value=9.4e-15  Score=107.42  Aligned_cols=109  Identities=24%  Similarity=0.348  Sum_probs=93.2

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC------ceeE
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLERE------EKIL  100 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~------~~~l  100 (146)
                      |...+.||+|+||.|      ..|..+|+|..... .........+|+.+|++++|+|||++++.-.+..      ...+
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            556788999999999      35668999998653 2334677889999999999999999988766544      4679


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||||.+|+|...+.++.+...+++...+.++.+++.||.|.
T Consensus        95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~L  136 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHL  136 (732)
T ss_pred             EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999988888899999999999999999764

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.55  E-value=1.1e-13  Score=96.91  Aligned_cols=102  Identities=20%  Similarity=0.145  Sum_probs=85.5

Q ss_pred             eeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNK  108 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g  108 (146)
                      +.||+|+||.|      ..+..+|+|.+...   .......+..|+.++..+.|++++++.+.+...+.+++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            36899999998      35778999998643   1223456788999999999999999999999999999999999999


Q ss_pred             CHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          109 RLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       109 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|...+..   ...+++..+..++.|++.||.|.
T Consensus        81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~L  111 (328)
T cd05593          81 ELFFHLSR---ERVFSEDRTRFYGAEIVSALDYL  111 (328)
T ss_pred             CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99988854   33588999999999999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.55  E-value=6.6e-14  Score=95.51  Aligned_cols=114  Identities=23%  Similarity=0.380  Sum_probs=91.1

Q ss_pred             HHHccCcccceeecccCceeecC-----------CcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC
Q 048150           28 EDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLER   95 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~   95 (146)
                      ....++|+..+.||+|+||.|+.           +..+++|.+..... .....+..|+.++..++|+|++++++.+...
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~   81 (277)
T cd05062           2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG   81 (277)
T ss_pred             cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            34567899999999999998842           34689998753321 2345678899999999999999999999888


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCC-------CCCCChHHHHHHHHHHHHHHhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEK-------QGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ...++++||+++|+|.+++.+...       ...+++..+..++.|++.||.|
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  134 (277)
T cd05062          82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAY  134 (277)
T ss_pred             CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence            899999999999999999864221       2235778899999999999976

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.55  E-value=1.4e-13  Score=93.39  Aligned_cols=113  Identities=19%  Similarity=0.174  Sum_probs=91.3

Q ss_pred             HccCcccceeecccCceeec------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ...++.....||+|+||.|+      .+..+++|.+..........+.+|+.++..++|+|++++++++...+..++++|
T Consensus         6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   85 (268)
T cd06624           6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFME   85 (268)
T ss_pred             ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEe
Confidence            34555566789999999983      345789998865554456678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++++|.+++.........++..+..++.|++.||.|.
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~l  124 (268)
T cd06624          86 QVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYL  124 (268)
T ss_pred             cCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHH
Confidence            999999999997532222237788889999999999753

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.55  E-value=9.9e-14  Score=101.58  Aligned_cols=110  Identities=10%  Similarity=0.096  Sum_probs=90.3

Q ss_pred             CcccceeecccCceee------cC-CcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           33 KFSTDNKLGEGGFGVL------PN-EHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~-~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      .|.+.+.||+|+||.|      .. +..+++|.+..........+..|+.++..++||||+++++.+...+..+++|||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            4889999999999988      22 4568888765444334456778999999999999999999999999999999999


Q ss_pred             CCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          106 PNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       106 ~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|+|.+.+.+. .....+++..+..++.|++.||.|.
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~l  185 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEV  185 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999887542 2244588889999999999999763

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.55  E-value=1.2e-13  Score=96.70  Aligned_cols=108  Identities=15%  Similarity=0.121  Sum_probs=88.8

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|...+.||+|+||.|      ..+..+|+|.+...   .......+..|..++..++|++++++.+.+...+.++++|
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            46888999999999988      34567999998532   1122345778888999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++|+|.+++.+.  ...+++..+..++.|++.||.|
T Consensus        81 ey~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~  117 (332)
T cd05623          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDS  117 (332)
T ss_pred             eccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999652  2347888899999999999976

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.55  E-value=1.3e-13  Score=93.80  Aligned_cols=111  Identities=25%  Similarity=0.378  Sum_probs=91.1

Q ss_pred             cCcccceeecccCceeecC-----------CcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           32 NKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ++|.....||+|+||.|+.           ...+++|.+...... ....+..|+.++..++|++++++++.+...+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            6788899999999999832           346888887544333 3567889999999999999999999998888899


Q ss_pred             EEEEecCCCCHHHhhcCCCC------CCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEK------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++|+|.+++.....      ...+++..+..++.|++.+|.|.
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~L  133 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHL  133 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999975321      12589999999999999999753

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.55  E-value=7.1e-14  Score=99.15  Aligned_cols=115  Identities=17%  Similarity=0.242  Sum_probs=91.4

Q ss_pred             HHHHccCcccceeecccCceee------cCCcEEEEEEeccCC--------------cccHHHHHHHHHHHhhCCCCCee
Q 048150           27 IEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--------------SQGAQEINNEVVVVAKLQHINLV   86 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--------------~~~~~~~~~e~~~l~~l~h~~i~   86 (146)
                      -....+.|.+...||+|.||+|      -.+..+|+|++.+..              ....+.+.+|+.+|+++.|+|++
T Consensus        92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV  171 (576)
T KOG0585|consen   92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV  171 (576)
T ss_pred             cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence            3445577999999999999999      456789999996431              11235789999999999999999


Q ss_pred             eEeeEEEcC--CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhcc
Q 048150           87 RLLGFCLER--EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL  144 (146)
Q Consensus        87 ~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~  144 (146)
                      +|+++..++  +.+|||+|||..|.+.+.--+   ...+.+.++.++++++..||.|.|.
T Consensus       172 ~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d---~~els~~~Ar~ylrDvv~GLEYLH~  228 (576)
T KOG0585|consen  172 KLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD---KPELSEQQARKYLRDVVLGLEYLHY  228 (576)
T ss_pred             EEEEeecCcccCceEEEEEeccCCccccCCCC---cccccHHHHHHHHHHHHHHHHHHHh
Confidence            999998765  459999999999987654321   2228899999999999999988553

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.55  E-value=1.1e-13  Score=93.53  Aligned_cols=110  Identities=21%  Similarity=0.280  Sum_probs=92.6

Q ss_pred             HccCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           30 ATNKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ..++|...+.||+|++|.|+     .+..+++|.+.... .....+.+|+.++..++|+|++++++.+...+..++++||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            45678899999999999883     34578999986432 2456788999999999999999999999989999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++|.+++.... ...+++..+..++.+++.||.|
T Consensus        83 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~  118 (261)
T cd05068          83 MKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAY  118 (261)
T ss_pred             ccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999997532 3457899999999999999975

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.55  E-value=9.4e-14  Score=96.68  Aligned_cols=102  Identities=16%  Similarity=0.153  Sum_probs=84.9

Q ss_pred             eeecccCceeec---------CCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           38 NKLGEGGFGVLP---------NEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        38 ~~lg~g~fg~v~---------~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      +.||+|+||.|+         .|..+|+|++....  ......+..|+.++..++|+||+++++.+...+.+++++||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            578999999883         46789999986432  1233456789999999999999999999999999999999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|+|.+.+..   ...+++..+..++.|++.||.|.
T Consensus        82 ~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~l  114 (318)
T cd05582          82 GGDLFTRLSK---EVMFTEEDVKFYLAELALALDHL  114 (318)
T ss_pred             CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999998854   33588999999999999999763

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.54  E-value=5.8e-14  Score=96.15  Aligned_cols=111  Identities=15%  Similarity=0.170  Sum_probs=91.8

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++|.+.+.||+|+||.|      ..+..+++|.+.... ......+.+|+.++..+.|+|++++++.+...+.+++++||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            36788899999999988      357789999886432 22345688999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++|..++........+++..+..++.+++.||.|.
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L  118 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFL  118 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999886532233589999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.54  E-value=2.2e-13  Score=93.56  Aligned_cols=107  Identities=21%  Similarity=0.265  Sum_probs=88.8

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++|...+.||+|+||.|      ..+..+|+|.+.... ......+.+|+.++..++|+|++++++++...+..++++||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            56888999999999998      356789999986432 22345677899999999999999999999888889999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++ +|.+++...  ...+++..+..++.|++.||.|
T Consensus        85 ~~~-~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~  118 (288)
T cd07871          85 LDS-DLKQYLDNC--GNLMSMHNVKIFMFQLLRGLSY  118 (288)
T ss_pred             CCc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHH
Confidence            985 898888642  2347888999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.54  E-value=1.5e-15  Score=116.28  Aligned_cols=120  Identities=15%  Similarity=0.143  Sum_probs=99.6

Q ss_pred             ChhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEE
Q 048150           23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCL   93 (146)
Q Consensus        23 ~~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~   93 (146)
                      ...++.-..++|.++++||+|+||.|      ..+..+|+|.+.++   +.....-|..|=.+|.-..++||+.++-.|.
T Consensus        66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ  145 (1317)
T KOG0612|consen   66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ  145 (1317)
T ss_pred             HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence            34556667789999999999999988      45778999999764   3334566888888999989999999999999


Q ss_pred             cCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh----hccC
Q 048150           94 EREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR----NFLF  145 (146)
Q Consensus        94 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~----~~~~  145 (146)
                      +.+++|+||||++||+|..++.+..   .+|+..+..++..++.||.-    +|+|
T Consensus       146 D~~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~mgyVH  198 (1317)
T KOG0612|consen  146 DERYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSMGYVH  198 (1317)
T ss_pred             CccceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhcccee
Confidence            9999999999999999999997643   57888888888888877754    6666

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.54  E-value=1.3e-13  Score=96.35  Aligned_cols=102  Identities=19%  Similarity=0.110  Sum_probs=84.8

Q ss_pred             eeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNK  108 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g  108 (146)
                      +.||+|+||.|      ..+..+|+|.+....   ......+..|+.++..+.|++++++.+.+...+.+++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            36899999998      367789999986431   223455678899999999999999999999999999999999999


Q ss_pred             CHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          109 RLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       109 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|...+..   ...+++..+..++.|++.||.|.
T Consensus        81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~l  111 (325)
T cd05594          81 ELFFHLSR---ERVFSEDRARFYGAEIVSALDYL  111 (325)
T ss_pred             cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99988854   23578999999999999999754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=2.3e-13  Score=91.84  Aligned_cols=109  Identities=17%  Similarity=0.286  Sum_probs=94.0

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      .++|...+.+|+|+|+.|      ..+..+++|.+..........+..|+.++..++|++++++++.+...+.+++++||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            467889999999999988      34567999998765555567889999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++|.+++...  ...+++..+..++.|++.||.|
T Consensus        82 ~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~  116 (262)
T cd06613          82 CGGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAY  116 (262)
T ss_pred             CCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHH
Confidence            9999999988652  2458899999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.54  E-value=2.1e-13  Score=92.10  Aligned_cols=112  Identities=23%  Similarity=0.335  Sum_probs=93.5

Q ss_pred             HHccCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           29 DATNKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ...++|.+.+.||+|+||.|+     .+..+++|.+.... .....+..|+.++..++|++++++++.+......++++|
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE   81 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence            456789999999999999883     34568999886432 345678899999999999999999999988888999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++++|.+++... ....+++..+..++.+++.|+.|.
T Consensus        82 ~~~~~~L~~~i~~~-~~~~~~~~~~~~~~~~i~~al~~l  119 (261)
T cd05034          82 YMSKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYL  119 (261)
T ss_pred             ccCCCCHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999763 233588999999999999999753

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.54  E-value=1.1e-13  Score=93.93  Aligned_cols=108  Identities=16%  Similarity=0.251  Sum_probs=91.7

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      ++|...+.||+|+||.|      ..+..+++|.++.........+..|+.++..++|++++++++.+...+..++++||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            46778889999999988      356789999986554444556778999999999999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++|.+++..   ...+++.....++.|++.||.|.
T Consensus        89 ~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~l  122 (267)
T cd06645          89 GGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYL  122 (267)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999998854   23578999999999999999763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.54  E-value=1.4e-14  Score=97.78  Aligned_cols=106  Identities=22%  Similarity=0.290  Sum_probs=87.3

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCc-cc-HHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QG-AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~-~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      .|....++|+|+||.|      ..|..||+|.+..+.. .. .+-.++|+++++++.|+|++.|.++|.....+.||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            4677889999999999      5788999999864422 12 34568999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+..-|.++= .  ....++...+..++-|++.|+.|
T Consensus        83 ~dhTvL~eLe-~--~p~G~~~~~vk~~l~Q~l~ai~~  116 (396)
T KOG0593|consen   83 CDHTVLHELE-R--YPNGVPSELVKKYLYQLLKAIHF  116 (396)
T ss_pred             cchHHHHHHH-h--ccCCCCHHHHHHHHHHHHHHhhh
Confidence            9995555543 2  34458889999999999999976

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.54  E-value=1.9e-13  Score=92.38  Aligned_cols=112  Identities=25%  Similarity=0.357  Sum_probs=91.9

Q ss_pred             HHHccCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           28 EDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .+..++|.+.+.||+|+||.|     ..+..+++|.+.... .....+..|+.++..++|++++++++.+ ..+..++++
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~   79 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIIT   79 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEE
Confidence            345678899999999999988     356789999986433 2456788999999999999999999876 456789999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++++|.+++.... ...+++.....++.|++.+|.|.
T Consensus        80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~L  118 (260)
T cd05067          80 EYMENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFI  118 (260)
T ss_pred             EcCCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999986532 34588899999999999999763

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.54  E-value=1.5e-13  Score=96.13  Aligned_cols=102  Identities=15%  Similarity=0.113  Sum_probs=84.7

Q ss_pred             eeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|      ..+..+|+|.+....   ......+..|..++..+ +||+|+++++++...+.++++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            36899999998      356789999997432   22345677888888888 799999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        81 g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~l  112 (329)
T cd05588          81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNFL  112 (329)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999988854   23589999999999999999763

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.54  E-value=2.4e-13  Score=92.23  Aligned_cols=109  Identities=24%  Similarity=0.451  Sum_probs=90.6

Q ss_pred             ccCcccceeecccCceeecC---------CcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           31 TNKFSTDNKLGEGGFGVLPN---------EHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~---------~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      .++|+..+.||+|+||.|+.         ...+++|.+..... .....+..|+.++..++|+|++++++.+...+..++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i   82 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI   82 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence            35688999999999999842         24688998764322 234568889999999999999999999998889999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++||+++++|.+++....  ..+++..+..++.|++.||.|
T Consensus        83 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~  121 (266)
T cd05033          83 ITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKY  121 (266)
T ss_pred             EEEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999986532  358899999999999999976

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.53  E-value=2.8e-13  Score=93.68  Aligned_cols=108  Identities=22%  Similarity=0.274  Sum_probs=89.1

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      .++|...+.||+|+||.|      ..+..+|+|.+..... .....+.+|+.++..++|+|++++++++......++++|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            467999999999999998      3567899999864422 224457789999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |++ ++|.+++...  ...++...+..++.|++.||.|
T Consensus        84 ~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~  118 (303)
T cd07869          84 YVH-TDLCQYMDKH--PGGLHPENVKLFLFQLLRGLSY  118 (303)
T ss_pred             CCC-cCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHH
Confidence            996 5788877542  3347888899999999999976

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.53  E-value=2.4e-13  Score=92.12  Aligned_cols=110  Identities=17%  Similarity=0.269  Sum_probs=90.8

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|.+.+.||+|+||.|      ..+..+++|.+....   ......+..|+.++..++|++++++++.+...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            57889999999999988      356789999875422   223456788999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCC-CCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPE-KQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++|+|.+++.... ....+++..+..++.|++.||.|
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  121 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEH  121 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999998885422 23447888999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.53  E-value=1e-14  Score=105.69  Aligned_cols=111  Identities=20%  Similarity=0.245  Sum_probs=90.9

Q ss_pred             hHHHHHccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      +.|+++-+.+.-++.||.|+=|.|    ..+..||||.++..+.       .++..|+.++|+||+.+.|+|....-++|
T Consensus       117 e~WeiPFe~IsELeWlGSGaQGAVF~Grl~netVAVKKV~elkE-------TdIKHLRkLkH~NII~FkGVCtqsPcyCI  189 (904)
T KOG4721|consen  117 ELWEIPFEEISELEWLGSGAQGAVFLGRLHNETVAVKKVRELKE-------TDIKHLRKLKHPNIITFKGVCTQSPCYCI  189 (904)
T ss_pred             hhccCCHHHhhhhhhhccCcccceeeeeccCceehhHHHhhhhh-------hhHHHHHhccCcceeeEeeeecCCceeEE
Confidence            455566666667899999999998    4456799988753332       56778999999999999999998888999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccC
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLF  145 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~  145 (146)
                      +||||..|.|...|+.   ...+..........+|+.||.|.++|
T Consensus       190 iMEfCa~GqL~~VLka---~~~itp~llv~Wsk~IA~GM~YLH~h  231 (904)
T KOG4721|consen  190 IMEFCAQGQLYEVLKA---GRPITPSLLVDWSKGIAGGMNYLHLH  231 (904)
T ss_pred             eeeccccccHHHHHhc---cCccCHHHHHHHHHHhhhhhHHHHHh
Confidence            9999999999999975   23466677889999999999988777

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.53  E-value=2.9e-13  Score=92.88  Aligned_cols=108  Identities=20%  Similarity=0.218  Sum_probs=89.1

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      |+..+.||+|+||.|      ..+..+|+|.+.....   .....+..|+.++..++|++++.+.+.+...+..++++||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            567788999999998      3567899999864321   1234567899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++|.+++... ....+++..+..++.|++.||.|.
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~l  118 (285)
T cd05632          82 MNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDL  118 (285)
T ss_pred             ccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999888642 233589999999999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.53  E-value=1.1e-13  Score=93.80  Aligned_cols=110  Identities=22%  Similarity=0.340  Sum_probs=91.8

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ..+|...+.||+|+||.|      ..+..+++|.+... ......+.+|+.++..+.|++++++++.+...+.+++++||
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   83 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence            356788899999999988      34678999988643 23456788999999999999999999999988999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++|.+++... ....+++..+..++.|++.||.|.
T Consensus        84 ~~~~~L~~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~l  120 (263)
T cd05052          84 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYL  120 (263)
T ss_pred             CCCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999998653 234578889999999999999753

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.53  E-value=4.7e-13  Score=90.21  Aligned_cols=108  Identities=19%  Similarity=0.236  Sum_probs=90.1

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      +|.+.+.||+|+||.|      ..+..+++|.+... .......+..|+.++..++|+|++++.+.+...+.+++++||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            4778899999999987      46778999988543 2234566778999999999999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++|+|.+++... ....+++..+..++.+++.||.|
T Consensus        81 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~  115 (255)
T cd08219          81 DGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQH  115 (255)
T ss_pred             CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHH
Confidence            999999988642 23347888999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.53  E-value=3.9e-14  Score=101.68  Aligned_cols=111  Identities=22%  Similarity=0.309  Sum_probs=94.1

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCc
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREE   97 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~   97 (146)
                      .....+|..++.||+|+|++|      ..+..+|+|++.+.   +..-.+-+..|-.+|..+ .||.|++|+--|.+...
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence            445578999999999999998      56778999998643   222344566777788888 89999999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +|+|+||+++|+|.++|..   .+.+++.+...++.+|+.+|.|
T Consensus       149 LYFvLe~A~nGdll~~i~K---~Gsfde~caR~YAAeIldAley  189 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKK---YGSFDETCARFYAAEILDALEY  189 (604)
T ss_pred             eEEEEEecCCCcHHHHHHH---hCcchHHHHHHHHHHHHHHHHH
Confidence            9999999999999999965   4569999999999999999986

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.53  E-value=1e-13  Score=95.14  Aligned_cols=115  Identities=22%  Similarity=0.299  Sum_probs=90.5

Q ss_pred             HHHccCcccceeecccCceeecC-----------CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC
Q 048150           28 EDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLER   95 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~   95 (146)
                      .....+|.+.+.||+|+||.|+.           +..+++|.+.... ......+..|+.++..++|++++++++.+...
T Consensus         2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   81 (288)
T cd05061           2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG   81 (288)
T ss_pred             cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            34567889999999999999843           2368899875332 12234577899999999999999999999988


Q ss_pred             CceeEEEEecCCCCHHHhhcCCC-------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPE-------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +..++++||+++|+|.+++....       .....++..+..++.|++.||.|.
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l  135 (288)
T cd05061          82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL  135 (288)
T ss_pred             CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999996421       123346678889999999999763

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.53  E-value=1.2e-13  Score=100.10  Aligned_cols=112  Identities=18%  Similarity=0.278  Sum_probs=95.1

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ......|.+...||+|.|++|      ..+..||+|.+.++.  ....+.+.+|+.+|..+.||||++++++..+...++
T Consensus        52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly  131 (596)
T KOG0586|consen   52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY  131 (596)
T ss_pred             cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence            344567899999999999998      567899999997653  233566899999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||||+.+|.+.+++.++.+   ........+..|+..++.|-
T Consensus       132 lV~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYc  171 (596)
T KOG0586|consen  132 LVMEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYC  171 (596)
T ss_pred             EEEEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHH
Confidence            99999999999999976443   45578889999999999873

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.53  E-value=2.6e-13  Score=91.26  Aligned_cols=103  Identities=19%  Similarity=0.347  Sum_probs=85.7

Q ss_pred             eeecccCceeec------CCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCH
Q 048150           38 NKLGEGGFGVLP------NEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL  110 (146)
Q Consensus        38 ~~lg~g~fg~v~------~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L  110 (146)
                      +.||+|+||.|+      .+..+++|.+.... ......+..|+.++..++|+|++++++++......++++||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            368999999883      56779999875432 22346688999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       111 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+++...  ...+++..+..++.|++.||.|.
T Consensus        81 ~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~l  110 (252)
T cd05084          81 LTFLRTE--GPRLKVKELIQMVENAAAGMEYL  110 (252)
T ss_pred             HHHHHhC--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            9998642  33478999999999999999763

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.52  E-value=2.4e-13  Score=92.32  Aligned_cols=108  Identities=22%  Similarity=0.409  Sum_probs=88.8

Q ss_pred             cCcccceeecccCceeecC---------CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           32 NKFSTDNKLGEGGFGVLPN---------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~~---------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      .+|...+.||+|+||.|+.         +..+++|.+.... ......+..|+.++..++|||++++++++...+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            5688899999999998832         2258888875432 22345688899999999999999999999988999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +||+++++|.+++...  ...+++..+..++.|++.||.|
T Consensus        84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~  121 (267)
T cd05066          84 TEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKY  121 (267)
T ss_pred             EEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999653  2347888999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.52  E-value=5.4e-13  Score=91.23  Aligned_cols=109  Identities=20%  Similarity=0.286  Sum_probs=89.8

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|...+.||+|++|.|      ..+..+++|.+....  ......+..|+.++..+.|+|++++++.+..++.+++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4778899999999988      356789999986432  22345678899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++ ++|.+++........+++..+..++.|++.||.|.
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~l  117 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFC  117 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence            98 58888886543345688999999999999999753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.52  E-value=8.3e-14  Score=100.17  Aligned_cols=109  Identities=20%  Similarity=0.257  Sum_probs=95.4

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCccc--HHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQG--AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ..=|.+.+.||+|-|+.|      ..|..||||++.+.+...  ...+..|+++|+.++||||+.|+++..++--+||++
T Consensus        17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL   96 (864)
T KOG4717|consen   17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL   96 (864)
T ss_pred             eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence            345788899999999987      789999999998775544  456789999999999999999999998888999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |.=++|+|.++|-.+..  .+.+....+++.||..++.|
T Consensus        97 ELGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~Y  133 (864)
T KOG4717|consen   97 ELGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISY  133 (864)
T ss_pred             EecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHH
Confidence            99999999999976543  48888899999999999988

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.52  E-value=4.1e-13  Score=92.67  Aligned_cols=109  Identities=22%  Similarity=0.305  Sum_probs=93.1

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ....+|...+.||+|+||.|      ..+..+++|.+..........+..|+.++..+.|+|++++++.+...+..++++
T Consensus        16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   95 (297)
T cd06656          16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   95 (297)
T ss_pred             ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence            34477999999999999988      357789999987554444566788999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++++|.+++.+    ..+++..+..++.+++.+|.|
T Consensus        96 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~  130 (297)
T cd06656          96 EYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDF  130 (297)
T ss_pred             cccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999854    237888999999999999965

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.52  E-value=4.4e-14  Score=105.61  Aligned_cols=113  Identities=19%  Similarity=0.302  Sum_probs=92.3

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEE-Ec---C--
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFC-LE---R--   95 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~-~~---~--   95 (146)
                      .-..++++.++|.+|+|+.|      ..|..+|+|++-.........+.+|+.+|+.+ .|+|||.+++.. ..   .  
T Consensus        34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~  113 (738)
T KOG1989|consen   34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG  113 (738)
T ss_pred             ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence            34456788999999999998      33488999998777777789999999999999 599999999833 21   1  


Q ss_pred             -CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 -EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       -..+|+||||.+|.|-++|..+- ...|.+.++++|+.++|+|+++-
T Consensus       114 ~~EvllLmEyC~gg~Lvd~mn~Rl-q~~lte~eVLkIf~dv~~AVa~m  160 (738)
T KOG1989|consen  114 VWEVLLLMEYCKGGSLVDFMNTRL-QTRLTEDEVLKIFYDVCEAVAAM  160 (738)
T ss_pred             eeEEEeehhhccCCcHHHHHHHHH-hccCChHHHHHHHHHHHHHHHHH
Confidence             23679999999999999997532 33499999999999999999763

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.52  E-value=4.3e-13  Score=90.60  Aligned_cols=109  Identities=18%  Similarity=0.251  Sum_probs=92.7

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      .+|...+.||+|+++.|      ..+..+++|.+..... .....+..|+..+..++|++++++++.+...+.+++++||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            36788899999999987      3577899999865433 3456788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccC
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLF  145 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~  145 (146)
                      +++++|.+++...   ..++......++.|++++|.  |+|
T Consensus        81 ~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~--~lh  116 (264)
T cd06623          81 MDGGSLADLLKKV---GKIPEPVLAYIARQILKGLD--YLH  116 (264)
T ss_pred             cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHH--HHh
Confidence            9999999999652   45889999999999999996  555

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=2e-13  Score=94.80  Aligned_cols=100  Identities=21%  Similarity=0.224  Sum_probs=83.6

Q ss_pred             ecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCH
Q 048150           40 LGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL  110 (146)
Q Consensus        40 lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L  110 (146)
                      ||+|+||.|      ..+..+|+|.+...   .......+..|+.++..++|+||+++.+.+...+..++++||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            689999998      34678999998643   122345677899999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       111 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+++..   ...+++..+..++.|++.||.|.
T Consensus        81 ~~~l~~---~~~~~~~~~~~~~~qi~~~l~~l  109 (312)
T cd05585          81 FHHLQR---EGRFDLSRARFYTAELLCALENL  109 (312)
T ss_pred             HHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999864   23478889999999999999763

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.52  E-value=1.9e-13  Score=92.91  Aligned_cols=106  Identities=21%  Similarity=0.343  Sum_probs=86.9

Q ss_pred             CcccceeecccCceeec------CCcEEEEEEeccCCc---c-------cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC
Q 048150           33 KFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSSS---Q-------GAQEINNEVVVVAKLQHINLVRLLGFCLERE   96 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~~---~-------~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~   96 (146)
                      +|...+.||.|+||.|+      .+..+++|.+.....   .       ..+.+..|+.++..++|++++++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            36678899999999983      467899998753211   0       1245678999999999999999999999999


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ..++++||+++++|.+++...   ..+++..+..++.|++.+|.|
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~  123 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAY  123 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999998653   457888999999999999964

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.52  E-value=3.1e-13  Score=92.89  Aligned_cols=107  Identities=24%  Similarity=0.298  Sum_probs=90.8

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|.+.+.||+|+||.|      ..+..+++|.+....   ......+..|+.++..+.|+|++++++.+...+.+++++
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            46888999999999988      356789999986432   223456788999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++++|.+++...   ..++...+..++.|++.||.|
T Consensus        81 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~  116 (290)
T cd05580          81 EYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEY  116 (290)
T ss_pred             ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHH
Confidence            999999999998652   457888999999999999975

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.52  E-value=4.7e-13  Score=92.31  Aligned_cols=108  Identities=20%  Similarity=0.291  Sum_probs=92.4

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      +..+|...+.||+|+||.|      ..+..+++|.+..........+..|+.++..+.|+|++++.+.+...+..++++|
T Consensus        18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e   97 (296)
T cd06654          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (296)
T ss_pred             cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence            4467889999999999988      3566899999876554456778899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+++++|.+++.+    ..+++..+..++.|++.||.|
T Consensus        98 ~~~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~  131 (296)
T cd06654          98 YLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEF  131 (296)
T ss_pred             ccCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999854    237888999999999999965

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.52  E-value=5e-14  Score=103.11  Aligned_cols=110  Identities=16%  Similarity=0.278  Sum_probs=90.8

Q ss_pred             HHccCcccceeecccCceeecCC--------c--EEEEEEecc-CCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           29 DATNKFSTDNKLGEGGFGVLPNE--------H--EIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v~~~--------~--~~a~k~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      ...+.+.....||.|.||.|+.|        .  .||+|..+. ..+...+.|..|+.+|+...||||++|+|.|. ...
T Consensus       386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~-e~P  464 (974)
T KOG4257|consen  386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV-EQP  464 (974)
T ss_pred             eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee-ccc
Confidence            34455777889999999998333        2  478887765 34556889999999999999999999999985 456


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .|++||.++.|.|..+++.+.  ..++......++.||+.+|+|
T Consensus       465 ~WivmEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaY  506 (974)
T KOG4257|consen  465 MWIVMELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAY  506 (974)
T ss_pred             eeEEEecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHH
Confidence            799999999999999998643  348888999999999999987

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.52  E-value=4e-13  Score=92.19  Aligned_cols=108  Identities=19%  Similarity=0.223  Sum_probs=88.3

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccCCcc---cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ---GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      |+..+.||+|+||.|      ..+..+++|.+......   ....+..|+.++..++|++++.+.+.+...+.+++++||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            667789999999998      35678999988643221   234567899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++|.+++... ....+++..+..++.|++.||.|.
T Consensus        82 ~~g~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~l  118 (285)
T cd05630          82 MNGGDLKFHIYHM-GEAGFEEGRAVFYAAEICCGLEDL  118 (285)
T ss_pred             cCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999988542 233588899999999999999763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.52  E-value=2.3e-13  Score=93.25  Aligned_cols=107  Identities=21%  Similarity=0.254  Sum_probs=88.0

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|.+.+.||+|+||.|      ..+..+++|.+....  ......+.+|+.++..++|+|++++++++...+..++++||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY   81 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence            6888999999999988      356689999986432  22356678899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++.+..+...   ...+++..+..++.|++.||.|.
T Consensus        82 ~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~L~~l  116 (287)
T cd07848          82 VEKNMLELLEEM---PNGVPPEKVRSYIYQLIKAIHWC  116 (287)
T ss_pred             CCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH
Confidence            999777655432   33588889999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.52  E-value=2.7e-13  Score=92.09  Aligned_cols=108  Identities=19%  Similarity=0.384  Sum_probs=89.8

Q ss_pred             cCcccceeecccCceeecC------C---cEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           32 NKFSTDNKLGEGGFGVLPN------E---HEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~~------~---~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      .+|+..+.||+|+||.|+.      +   ..+++|.+... .......+..|+.++..+.|+|++++.+.+...+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            4578899999999998832      2   25899998643 223356788999999999999999999999888899999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +||+++|+|.+++...  ...+++..+..++.|++.||.|
T Consensus        84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~  121 (269)
T cd05065          84 TEFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKY  121 (269)
T ss_pred             EecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999998653  3347889999999999999976

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.52  E-value=2.8e-13  Score=91.15  Aligned_cols=108  Identities=19%  Similarity=0.306  Sum_probs=90.4

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|...+.||+|+||.|      ..+..+++|.+....  ......+..|+.++..++|++++++++.+...+..++++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            4778899999999988      356789999986442  22356788999999999999999999999888999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++|.+++... ....+++..+..++.+++.+|.|
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~  116 (256)
T cd08220          81 APGGTLAEYIQKR-CNSLLDEDTILHFFVQILLALHH  116 (256)
T ss_pred             CCCCCHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999753 23347889999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.52  E-value=2.2e-13  Score=93.28  Aligned_cols=108  Identities=19%  Similarity=0.198  Sum_probs=91.1

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++|++.+.||+|+||.|      ..+..+++|.+.... ......+..|+.++..+.|+|++++++.+...+..++++||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            56788899999999998      346789999876432 23356788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++|.+++..   ...+++.....++.+++.+|.|.
T Consensus        85 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~L  119 (284)
T cd06620          85 MDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYL  119 (284)
T ss_pred             CCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHH
Confidence            999999998864   23478899999999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.52  E-value=3.6e-13  Score=92.13  Aligned_cols=111  Identities=23%  Similarity=0.312  Sum_probs=89.3

Q ss_pred             cCcccceeecccCceeecC----------CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           32 NKFSTDNKLGEGGFGVLPN----------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~~----------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ++|++.+.||+|+||.|+.          +..+++|.+.... ......+.+|+.++..++|+|++++++.+...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            5678889999999999843          3468888886432 2234568889999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCC--------------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPE--------------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||+++++|.+++....              ....+++.....++.|++.||.|.
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l  140 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYL  140 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence            999999999999885321              123478888999999999999753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.52  E-value=1.9e-13  Score=105.87  Aligned_cols=118  Identities=19%  Similarity=0.231  Sum_probs=94.2

Q ss_pred             HHHHHccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEc--C
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLE--R   95 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~--~   95 (146)
                      .......+|.+...||+|+||.|      ..+..+++|.+....  ......+..|+.++..+.||+|+++++.+..  .
T Consensus         7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~   86 (1021)
T PTZ00266          7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN   86 (1021)
T ss_pred             CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence            33445578999999999999998      345678999886432  2235668899999999999999999998864  3


Q ss_pred             CceeEEEEecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150           96 EEKILVYEYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      ..++++|||+++|+|.++|... .....+++..++.++.||+.||.|.+
T Consensus        87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLH  135 (1021)
T PTZ00266         87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCH  135 (1021)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4689999999999999998642 12345899999999999999998643

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.52  E-value=4e-13  Score=90.40  Aligned_cols=108  Identities=23%  Similarity=0.332  Sum_probs=90.9

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|...+.||+|+++.|      ..+..+++|.+...  .......+..|+.++..++|+|++++++.+...+..++++||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            4777899999999988      35678999998643  233456788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++|.+++... ....+++..+..++.+++.+|.|
T Consensus        81 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~  116 (256)
T cd08529          81 AENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAH  116 (256)
T ss_pred             CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999998753 23458889999999999999975

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.51  E-value=2.5e-13  Score=93.54  Aligned_cols=111  Identities=23%  Similarity=0.388  Sum_probs=89.4

Q ss_pred             ccCcccceeecccCceeecC--------------------CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEe
Q 048150           31 TNKFSTDNKLGEGGFGVLPN--------------------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLL   89 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~--------------------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~   89 (146)
                      .++|.+.+.||+|+||.|+.                    ...+++|.+.... ......+.+|+.++..++|+++++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            45788999999999999832                    1247899886432 22345688999999999999999999


Q ss_pred             eEEEcCCceeEEEEecCCCCHHHhhcCCC---------CCCCCChHHHHHHHHHHHHHHhh
Q 048150           90 GFCLEREEKILVYEYVPNKRLDNFLYEPE---------KQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        90 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++...+..++++||+++++|.+++....         ....+++..+..++.+++.||.|
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~  144 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKY  144 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999885421         11236788899999999999976

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.51  E-value=3.4e-13  Score=91.20  Aligned_cols=111  Identities=22%  Similarity=0.291  Sum_probs=91.1

Q ss_pred             HHHccCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           28 EDATNKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .....+|...+.||+|+||.|+     .+..+++|.+... ......+.+|+.++..++|++++++++.+.. ...++++
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~   79 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT   79 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence            4566789999999999999983     3456888887532 2235678889999999999999999998876 7789999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++++|.+++... ....+++..+..++.+++.+|.|
T Consensus        80 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~  117 (260)
T cd05073          80 EFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAF  117 (260)
T ss_pred             EeCCCCcHHHHHHhC-CccccCHHHHHHHHHHHHHHHHH
Confidence            999999999999753 23457888899999999999976

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.51  E-value=3.8e-13  Score=93.89  Aligned_cols=107  Identities=19%  Similarity=0.146  Sum_probs=86.6

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCC-CCeeeEeeEEEcCCceeEEE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQH-INLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h-~~i~~l~~~~~~~~~~~lv~  102 (146)
                      +|...+.||+|+||.|      ..+..+|+|.+...   .......+..|..++..+.| ++++.+++++...+.++++|
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            4788899999999998      24567999998643   12234567788888888865 56888999998889999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+.+..   ...+++..+..++.|++.||.|.
T Consensus        81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~l  117 (324)
T cd05587          81 EYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFL  117 (324)
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999998864   23478889999999999999763

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.51  E-value=4.2e-13  Score=93.90  Aligned_cols=107  Identities=19%  Similarity=0.200  Sum_probs=88.3

Q ss_pred             CcccceeecccCceeec---------CCcEEEEEEeccC----CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCce
Q 048150           33 KFSTDNKLGEGGFGVLP---------NEHEIAVKRLSRS----SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEK   98 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v~---------~~~~~a~k~~~~~----~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~   98 (146)
                      +|.+.+.||+|+||.|+         .+..+|+|++...    .......+..|+.++..+ .|++++.+++.+...+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            47889999999999883         4678999998642    112245577899999999 589999999999988999


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        81 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~l  121 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHL  121 (332)
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999998864   23478889999999999999763

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.51  E-value=4.9e-13  Score=105.09  Aligned_cols=104  Identities=27%  Similarity=0.400  Sum_probs=86.0

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ...++...+.||+|+||.|      ..+..+|+|.+.....    ....++..+.+++||||+++++++...+..++|||
T Consensus       688 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E  763 (968)
T PLN00113        688 ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE  763 (968)
T ss_pred             HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence            3456778889999999998      3466899998854322    11245778999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      |+++|+|.++++.      ++|..+..++.|++.||.|.|
T Consensus       764 y~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH  797 (968)
T PLN00113        764 YIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLH  797 (968)
T ss_pred             CCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhc
Confidence            9999999999853      788999999999999998654

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.51  E-value=3.7e-13  Score=103.70  Aligned_cols=111  Identities=15%  Similarity=0.219  Sum_probs=90.3

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .+|...+.||+|+||.|      ..+..+|+|.+.....   .....+.+|+.++..++|||++++++.+...+..+++|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            46888999999999998      3467899999864322   22456889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCC--------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPE--------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~--------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++.+..        .....++..+..++.|++.||.|.
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yL  129 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYV  129 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHH
Confidence            9999999999886311        122356677889999999999763

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.51  E-value=4.3e-13  Score=91.81  Aligned_cols=102  Identities=21%  Similarity=0.239  Sum_probs=83.5

Q ss_pred             ecccCceee------cCCcEEEEEEeccCCcc---cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCH
Q 048150           40 LGEGGFGVL------PNEHEIAVKRLSRSSSQ---GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL  110 (146)
Q Consensus        40 lg~g~fg~v------~~~~~~a~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L  110 (146)
                      ||+|+||.|      ..+..+|+|.+......   ....+..|+.++..++|++++++.+.+...+.++++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            689999998      35678999998643221   234567899999999999999999999988999999999999999


Q ss_pred             HHhhcCC-CCCCCCChHHHHHHHHHHHHHHhh
Q 048150          111 DNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       111 ~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ...+... .....+++..+..++.|++.||.|
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~  112 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEH  112 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHH
Confidence            8877532 234458999999999999999976

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.51  E-value=3.3e-13  Score=94.24  Aligned_cols=104  Identities=18%  Similarity=0.187  Sum_probs=84.0

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHH---hhCCCCCeeeEeeEEEcCCceeEE
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVV---AKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l---~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      |.+.+.||+|+||.|      ..+..+|+|.+....   ......+..|.+++   ..+.|+|++++++++...+..+++
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            567889999999998      356789999986431   22244566666655   456799999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |||+++|+|...+..    ..+++..+..++.|++.||.|
T Consensus        81 ~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~  116 (324)
T cd05589          81 MEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQY  116 (324)
T ss_pred             EcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHH
Confidence            999999999888743    348899999999999999975

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.51  E-value=6.2e-13  Score=89.59  Aligned_cols=108  Identities=19%  Similarity=0.261  Sum_probs=89.9

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|+..+.||+|+||.+      ..+..+++|.+...  .......+..|+.++..++|++++++.+++...+..++++||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            4778899999999987      35778999998643  222345688899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++|.+.+... ....+++..+..++.|++.||.|
T Consensus        81 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~  116 (256)
T cd08218          81 CEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKH  116 (256)
T ss_pred             CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999988642 22347888999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.51  E-value=2.2e-13  Score=94.34  Aligned_cols=116  Identities=21%  Similarity=0.326  Sum_probs=92.6

Q ss_pred             HHHHccCcccceeecccCceeecCC-------------cEEEEEEeccCC-cccHHHHHHHHHHHhhC-CCCCeeeEeeE
Q 048150           27 IEDATNKFSTDNKLGEGGFGVLPNE-------------HEIAVKRLSRSS-SQGAQEINNEVVVVAKL-QHINLVRLLGF   91 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v~~~-------------~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~l~~~   91 (146)
                      +....++|.+.+.||+|+||.|+..             ..+++|.+.... ......+..|+.++..+ +|++++++++.
T Consensus        13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (307)
T cd05098          13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA   92 (307)
T ss_pred             ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            3444567899999999999998422             358899886432 22345677899999998 79999999999


Q ss_pred             EEcCCceeEEEEecCCCCHHHhhcCCCC-------------CCCCChHHHHHHHHHHHHHHhhh
Q 048150           92 CLEREEKILVYEYVPNKRLDNFLYEPEK-------------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        92 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +...+..++++||+++|+|.+++.....             ...+++..+..++.|++.||.|.
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l  156 (307)
T cd05098          93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYL  156 (307)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999975321             12478889999999999999763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.51  E-value=4.1e-13  Score=92.18  Aligned_cols=111  Identities=25%  Similarity=0.441  Sum_probs=91.3

Q ss_pred             ccCcccceeecccCceeecC-----------CcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           31 TNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ..+|.+.+.+|+|+||.|+.           +..+++|.+..........+..|+.++..++|++++++++.+...+.++
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   83 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            35688899999999999832           2347888876544444667889999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCC----------CCCCCChHHHHHHHHHHHHHHhh
Q 048150          100 LVYEYVPNKRLDNFLYEPE----------KQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++||+++++|.+++....          ....+++..+..++.|++.+|.|
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~  135 (288)
T cd05093          84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVY  135 (288)
T ss_pred             EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999986422          22348999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.51  E-value=4.6e-13  Score=91.60  Aligned_cols=107  Identities=17%  Similarity=0.209  Sum_probs=88.9

Q ss_pred             cccceeecccCceeec------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           34 FSTDNKLGEGGFGVLP------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      |++.+.||+|+||.|+      .+..+++|.+..........+..|+.++..+.|+|++++.+.+...+..++++||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            5667889999999982      4567788888654444566788899999999999999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|..++.+.  ...+++..+..++.|++.||.|.
T Consensus        87 ~~l~~~~~~~--~~~l~~~~~~~~~~qi~~~L~~L  119 (282)
T cd06643          87 GAVDAVMLEL--ERPLTEPQIRVVCKQTLEALNYL  119 (282)
T ss_pred             CcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            9998887542  33588999999999999999753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.50  E-value=8.7e-13  Score=89.30  Aligned_cols=110  Identities=18%  Similarity=0.286  Sum_probs=92.1

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .+|...+.||+|+||.|      ..|..+++|.+...   .......+..|+.++..+.|++++++++.+...+..++++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            57888999999999988      36778999988632   2223567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++|+|..++.+. .....+++..+..++.+++.||.|
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  121 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEH  121 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHH
Confidence            999999999988642 223457889999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.50  E-value=8.4e-13  Score=90.22  Aligned_cols=108  Identities=20%  Similarity=0.317  Sum_probs=89.8

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      +|...+.||.|++|.|      ..|..+++|.+..... .....+..|+.++..++|+|++++++.+...+..++++||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            5788899999999988      3467899999865432 23456778999999999999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++ +|.+++........+++..+..++.|++.||.|
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~  115 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAF  115 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHH
Confidence            85 888888654434568999999999999999975

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.50  E-value=2.9e-13  Score=92.35  Aligned_cols=112  Identities=26%  Similarity=0.443  Sum_probs=91.7

Q ss_pred             ccCcccceeecccCceeecC-----------CcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           31 TNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      ..+|.+.+.||+|+||.|+.           +..+++|.+...... ....+.+|+.++..+.|++++++++.+......
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   83 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP   83 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence            35678889999999999842           246899998654333 356788999999999999999999999999999


Q ss_pred             eEEEEecCCCCHHHhhcCCC-----------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPE-----------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++++|.+++....           ....+++..+..++.|++.|+.|.
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l  138 (280)
T cd05049          84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYL  138 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHH
Confidence            99999999999999996532           123478889999999999999763

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.50  E-value=5.2e-13  Score=92.01  Aligned_cols=111  Identities=23%  Similarity=0.381  Sum_probs=89.8

Q ss_pred             ccCcccceeecccCceeecC----------------------CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeee
Q 048150           31 TNKFSTDNKLGEGGFGVLPN----------------------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVR   87 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~----------------------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~   87 (146)
                      .++|++.+.||+|+||.|+.                      +..+++|.+.... ......+..|+.++..++|+|+++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            35688999999999999842                      2257888886432 223467889999999999999999


Q ss_pred             EeeEEEcCCceeEEEEecCCCCHHHhhcCCCC--------CCCCChHHHHHHHHHHHHHHhh
Q 048150           88 LLGFCLEREEKILVYEYVPNKRLDNFLYEPEK--------QGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        88 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++...+..++++||+++|+|.+++.....        ...+++..+..++.|++.||.|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~  145 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKY  145 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999865221        1236778899999999999976

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.50  E-value=5.5e-13  Score=89.99  Aligned_cols=107  Identities=26%  Similarity=0.434  Sum_probs=88.7

Q ss_pred             cCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           32 NKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      .+|...+.||+|+||.|+     .+..+++|.+.... .....+..|+.++..++|+|++++++.+...+..++++||++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            457788999999999883     33468999875322 234567889999999999999999999988889999999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++|.+++....  ..+++..+..++.|++.||.|
T Consensus        83 ~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~  115 (256)
T cd05059          83 NGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEY  115 (256)
T ss_pred             CCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHH
Confidence            999999986532  357899999999999999976

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.50  E-value=6.4e-13  Score=91.95  Aligned_cols=107  Identities=14%  Similarity=0.190  Sum_probs=89.4

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .+|...+.||+|+|+.|      ..+..+++|.+.....   .....+..|+.++..++|+|++++++.+...+.+++++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            36888899999999988      3456899998864321   22456778999999999999999999999889999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++++|.+++..   ...+++..+..++.+++.||.|
T Consensus        81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~  116 (305)
T cd05609          81 EYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEY  116 (305)
T ss_pred             ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999965   2347888899999999999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.50  E-value=4.6e-14  Score=101.47  Aligned_cols=110  Identities=22%  Similarity=0.307  Sum_probs=94.6

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      +...|.....||+|+-|.|      ..+..||+|++....-...+-+..|+.+|...+|+||+.+++.+.-.+.+|+|||
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME  350 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME  350 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence            4466888899999999987      5667899999976554445668899999999999999999999998999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      |+++|+|.+.+..    ..+++.++..++.++++||.|.+
T Consensus       351 ym~ggsLTDvVt~----~~~~E~qIA~Icre~l~aL~fLH  386 (550)
T KOG0578|consen  351 YMEGGSLTDVVTK----TRMTEGQIAAICREILQGLKFLH  386 (550)
T ss_pred             ecCCCchhhhhhc----ccccHHHHHHHHHHHHHHHHHHH
Confidence            9999999998854    33899999999999999998644

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.50  E-value=3.9e-13  Score=93.84  Aligned_cols=101  Identities=18%  Similarity=0.238  Sum_probs=83.4

Q ss_pred             eeecccCceeec---------CCcEEEEEEeccCC----cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           38 NKLGEGGFGVLP---------NEHEIAVKRLSRSS----SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        38 ~~lg~g~fg~v~---------~~~~~a~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +.||+|+||.|+         .+..+|+|.+....    ......+..|+.++..++|+||+++++.+...+..+++|||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            579999999982         45679999986421    12234567899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++|+|.+.+..   ...+++..+..++.|++.||.|
T Consensus        82 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~  115 (323)
T cd05584          82 LSGGELFMHLER---EGIFMEDTACFYLSEISLALEH  115 (323)
T ss_pred             CCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHH
Confidence            999999998864   2346778888999999999976

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.50  E-value=4.1e-13  Score=93.77  Aligned_cols=107  Identities=19%  Similarity=0.148  Sum_probs=86.2

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCC-CCCeeeEeeEEEcCCceeEEE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQ-HINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      +|...+.||+|+||.|      ..+..+|+|.+....   ......+..|..++..+. |++++.+++++...+.++++|
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            4677899999999998      356789999986431   223455677888888775 577888999998889999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        81 Ey~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~l  117 (323)
T cd05615          81 EYVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFL  117 (323)
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999998854   23488999999999999999763

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.50  E-value=1.2e-12  Score=88.55  Aligned_cols=111  Identities=19%  Similarity=0.288  Sum_probs=92.8

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++|+..+.+|.|+||.|      ..+..+++|++.... ......+..|+.++..++|++++++++.+...+..++++|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            46888999999999988      355678999986432 22456788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++|.+++........+++..+..++.|++.||.|.
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~l  118 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYL  118 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999997533334588999999999999999753

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.50  E-value=8e-14  Score=94.24  Aligned_cols=103  Identities=23%  Similarity=0.332  Sum_probs=82.9

Q ss_pred             eeecccCceeecCCc-------------EEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           38 NKLGEGGFGVLPNEH-------------EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        38 ~~lg~g~fg~v~~~~-------------~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +.||+|+||.|+.+.             .+++|.+..........+..|+.++..+.|+|++++++.+...+..+++|||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            368999999984432             2666666443333456778899999999999999999999988899999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|+|.+++...  ...+++.....++.|++.||.|.
T Consensus        81 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~l  116 (258)
T cd05078          81 VKFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFL  116 (258)
T ss_pred             CCCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999653  23578888999999999999753

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.50  E-value=3.6e-13  Score=93.66  Aligned_cols=108  Identities=22%  Similarity=0.368  Sum_probs=87.4

Q ss_pred             ccCcccceeecccCceeecCC------c----EEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           31 TNKFSTDNKLGEGGFGVLPNE------H----EIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~~------~----~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ..+|+..+.||+|+||.|+.+      .    .+++|.+.... ....+.+..|+.++..+.|+|++++++++... ..+
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~   84 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ   84 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence            357899999999999999432      2    38899886432 23356788999999999999999999988754 567


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++|+++|+|.+++...  ...+++..+..++.|++.||.|
T Consensus        85 ~v~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~  124 (316)
T cd05108          85 LITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNY  124 (316)
T ss_pred             eeeecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHH
Confidence            999999999999998753  2347888899999999999975

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.50  E-value=1e-12  Score=88.84  Aligned_cols=108  Identities=20%  Similarity=0.310  Sum_probs=89.8

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcc-----cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ-----GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ++|...+.||+|++|.|      ..+..+++|.+......     ....+.+|+.++..+.|+|++++++++...+.+++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            56889999999999988      35678999998643211     23467889999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||+++++|.+.+..   ...+++.....++.|++.||.|.
T Consensus        82 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~l  120 (263)
T cd06625          82 FMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYL  120 (263)
T ss_pred             EEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999998864   23478888999999999999753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.49  E-value=6.3e-13  Score=90.90  Aligned_cols=112  Identities=27%  Similarity=0.407  Sum_probs=91.9

Q ss_pred             ccCcccceeecccCceeecC-----------CcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           31 TNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      .+++.....||+|+||.|+.           +..+++|.+..........+..|+.++..++|+|++++++.+...+..+
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL   83 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence            45678889999999998832           3467888876544445667889999999999999999999999888999


Q ss_pred             EEEEecCCCCHHHhhcCCCC------------CCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEK------------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++|+|.+++.....            ...+++..+..++.|++.|+.|.
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L  138 (280)
T cd05092          84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYL  138 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999865321            13478889999999999999763

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.49  E-value=3.8e-13  Score=92.04  Aligned_cols=121  Identities=18%  Similarity=0.265  Sum_probs=94.9

Q ss_pred             ccChhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEE
Q 048150           21 QFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCL   93 (146)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~   93 (146)
                      .+.++.+....++|...+.||+|+||.|      ..+..+++|.+.... .....+..|+.++..+ .|+|++++++++.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   85 (286)
T cd06638           7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYY   85 (286)
T ss_pred             eEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence            4556777778899999999999999988      356789999875321 2235577888889888 6999999999874


Q ss_pred             -----cCCceeEEEEecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           94 -----EREEKILVYEYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        94 -----~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                           ..+.+++++||+++++|.+++... .....+++..+..++.|++.||.|.
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~l  140 (286)
T cd06638          86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHL  140 (286)
T ss_pred             ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHH
Confidence                 345689999999999999987532 1234578888999999999999753

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=9.4e-13  Score=91.46  Aligned_cols=110  Identities=18%  Similarity=0.128  Sum_probs=92.0

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcc---cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ---GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .+|...+.||+|++|.|      ..+..+++|.+......   ....+..|+.++..+.|++++++++.+...+..++++
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            36788899999999988      34678999998654322   3456788999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+.+++|.+++... ....+++.....++.|++.||.|.
T Consensus        81 e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~l  119 (316)
T cd05574          81 DYCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYL  119 (316)
T ss_pred             EecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHH
Confidence            999999999998642 234588999999999999999763

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.49  E-value=6e-13  Score=93.17  Aligned_cols=102  Identities=17%  Similarity=0.143  Sum_probs=83.7

Q ss_pred             eeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|      ..+..+|+|.+...   .......+..|+.++..+ +|+|++++++++...+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            36899999998      35678999998753   222345677888888776 899999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+|...+..   ...+++..+..++.|++.||.|.
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~l  112 (329)
T cd05618          81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNYL  112 (329)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999888854   23588999999999999999763

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.49  E-value=1.3e-12  Score=88.58  Aligned_cols=107  Identities=22%  Similarity=0.383  Sum_probs=87.9

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCccc---------HHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQG---------AQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~---------~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      +|.+...||+|++|.|      ..+..+++|.+.......         ...+..|+.++..++|++++++++++...+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            3667889999999988      245679999885432211         2457789999999999999999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .++++||+++++|.+++..   ...+++..+..++.|++.+|.|.
T Consensus        81 ~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~l  122 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYL  122 (267)
T ss_pred             cEEEEEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999964   23478888999999999999764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.49  E-value=6e-13  Score=89.97  Aligned_cols=110  Identities=22%  Similarity=0.295  Sum_probs=89.5

Q ss_pred             HccCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           30 ATNKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ..++|.+.+.||+|+||.|+     .+..+++|.+..... ....+.+|+.++..++|++++++++.+. .+..++++||
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~   81 (260)
T cd05070           4 PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY   81 (260)
T ss_pred             chHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence            44578889999999999883     445789998864332 4567889999999999999999998774 5568899999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++|.+++... ....+++..+..++.+++.+|.|.
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~l  118 (260)
T cd05070          82 MSKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYI  118 (260)
T ss_pred             cCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999998653 233478999999999999999763

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.49  E-value=8.1e-13  Score=90.86  Aligned_cols=112  Identities=24%  Similarity=0.341  Sum_probs=91.1

Q ss_pred             ccCcccceeecccCceeecC----------------------CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeee
Q 048150           31 TNKFSTDNKLGEGGFGVLPN----------------------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVR   87 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~----------------------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~   87 (146)
                      ..+|.+.+.||+|+||.|+.                      +..+++|.+.... ......+..|+.++..++|+|+++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            35788999999999998831                      2357889886442 223567889999999999999999


Q ss_pred             EeeEEEcCCceeEEEEecCCCCHHHhhcCCC--------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           88 LLGFCLEREEKILVYEYVPNKRLDNFLYEPE--------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        88 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++...+..++++|++++++|.+++....        ....+++..+..++.|++.||.|.
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~L  146 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYL  146 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999998899999999999999999986532        112578999999999999999763

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.49  E-value=6e-13  Score=91.65  Aligned_cols=107  Identities=18%  Similarity=0.264  Sum_probs=88.7

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCcc-----cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ-----GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      +|...+.||+|+||.|      ..+..+++|.+......     ....+..|+.++..++|+|++++++++...+.++++
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            3677889999999988      24678999998754322     234567899999999999999999999998899999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+ +|+|.+++....  ..+++..+..++.|+++||.|.
T Consensus        81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~l  118 (298)
T cd07841          81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYL  118 (298)
T ss_pred             Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHH
Confidence            9999 889999996532  3588999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.49  E-value=8.8e-13  Score=88.79  Aligned_cols=106  Identities=24%  Similarity=0.345  Sum_probs=88.6

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC-----cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-----SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      +|...+.||+|+||.|      ..+..+++|.+....     ......+..|+.++..++|++++++.+.+...+.++++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            3667889999999988      257789999986432     12345688999999999999999999999988999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +||+++++|.+++.+.   ..+++..+..++.|++.||.|
T Consensus        81 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~  117 (258)
T cd06632          81 LELVPGGSLAKLLKKY---GSFPEPVIRLYTRQILLGLEY  117 (258)
T ss_pred             EEecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999998652   347888999999999999975

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.49  E-value=2.6e-14  Score=98.08  Aligned_cols=111  Identities=17%  Similarity=0.171  Sum_probs=95.2

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ..+|.+..+||+|+|++|      .....+|+|++++.   ..++..+++.|-.+..+. +||.++.|+.+|.+...+++
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            356999999999999988      56678999998754   445688999999988887 78999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccCC
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~  146 (146)
                      |.||+++|+|.-.+++   ...+|+..+..+...|+.+|  ||||+
T Consensus       329 vieyv~ggdlmfhmqr---qrklpeeharfys~ei~lal--~flh~  369 (593)
T KOG0695|consen  329 VIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEICLAL--NFLHE  369 (593)
T ss_pred             EEEEecCcceeeehhh---hhcCcHHHhhhhhHHHHHHH--HHHhh
Confidence            9999999999988864   45689999999999999766  67775

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.49  E-value=3.7e-13  Score=91.24  Aligned_cols=111  Identities=15%  Similarity=0.232  Sum_probs=91.3

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|.+.+.||+|+||.|      ..+..+++|.+....   ......+..|+.++..+.|+|++++++++...+.+++++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            46788899999999988      366789999875432   223456788999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCC-CCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPE-KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++++|.+++.... ....+++..+..++.+++.||.|.
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L  122 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM  122 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999886422 234578999999999999999754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.49  E-value=8.6e-13  Score=92.09  Aligned_cols=107  Identities=19%  Similarity=0.135  Sum_probs=85.9

Q ss_pred             CcccceeecccCceeec------CCcEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEE
Q 048150           33 KFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSS---SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      +|...+.||+|+||.|+      .+..+|+|.+....   .........|..++..+ .|++++.+++++...+.++++|
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            57788999999999983      45689999986432   11234456677777776 5789999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+.+..   ...+++..+..++.|++.||.|.
T Consensus        81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~L  117 (323)
T cd05616          81 EYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFL  117 (323)
T ss_pred             cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999988864   23478889999999999999763

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.49  E-value=7e-13  Score=92.72  Aligned_cols=102  Identities=17%  Similarity=0.121  Sum_probs=84.2

Q ss_pred             eeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|      ..+..+|+|++....   ......+..|..++..+ .|++++.+++++...+.++++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            36899999998      356789999997432   22345677888888887 699999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+|...+..   ...+++..+..++.|++.||.|.
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~al~~l  112 (327)
T cd05617          81 GDLMFHMQR---QRKLPEEHARFYAAEICIALNFL  112 (327)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999988854   23588999999999999999763

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.49  E-value=1.4e-12  Score=88.28  Aligned_cols=106  Identities=24%  Similarity=0.414  Sum_probs=87.9

Q ss_pred             CcccceeecccCceee-----cCCcEEEEEEeccCCc------ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           33 KFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSS------QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      +|...+.||+|+||.|     ..+..+++|.+.....      .....+..|+.++..++|+|++++.+++...+..+++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            4778899999999988     3566799998764321      1134577899999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +||+++++|.+++.+.   ..+++..+..++.|++.+|.|
T Consensus        81 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~  117 (265)
T cd06631          81 MEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAY  117 (265)
T ss_pred             EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999642   347888899999999999976

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.48  E-value=1.2e-12  Score=90.38  Aligned_cols=108  Identities=20%  Similarity=0.279  Sum_probs=89.1

Q ss_pred             cCcccceeecccCceeec------CCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++|...+.||+|+||.|+      .+..+++|.+.... ......+..|+.++..++|+||+++++++...+..++++||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            568889999999999982      45789999986443 22345677899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++ ++|.+.+...  ...+++..+..++.|++.||.|.
T Consensus        86 ~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~l  120 (301)
T cd07873          86 LD-KDLKQYLDDC--GNSINMHNVKLFLFQLLRGLNYC  120 (301)
T ss_pred             cc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            98 4888888642  33478889999999999999753

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.48  E-value=3.5e-13  Score=95.13  Aligned_cols=104  Identities=15%  Similarity=0.173  Sum_probs=85.0

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++|...+.||+|+||.|      ..+..+++|.+..... .....+.+|+.++..++|+||+++++++...+.+++++||
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            45677889999999998      2467899999864322 2245688999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|+|....       ..++..+..++.|++.||.|.
T Consensus       154 ~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~L  184 (353)
T PLN00034        154 MDGGSLEGTH-------IADEQFLADVARQILSGIAYL  184 (353)
T ss_pred             CCCCcccccc-------cCCHHHHHHHHHHHHHHHHHH
Confidence            9999986432       245677888999999999763

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.48  E-value=8.3e-13  Score=100.18  Aligned_cols=108  Identities=19%  Similarity=0.193  Sum_probs=91.0

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .+|.+.+.||+|+||.|      ..+..+|+|++.....   .....+..|+.++..++|++|++++..+...+.++++|
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            57889999999999998      2467899999864322   12456788999999999999999999999899999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++++|.+++..   ...+++..+..++.||+.||.|.
T Consensus        84 Ey~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yL  120 (669)
T cd05610          84 EYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYL  120 (669)
T ss_pred             eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999864   23478888999999999999764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.48  E-value=4.3e-13  Score=92.14  Aligned_cols=117  Identities=21%  Similarity=0.346  Sum_probs=92.8

Q ss_pred             HHHHHccCcccceeecccCceeecC-----------CcEEEEEEeccCC-cccHHHHHHHHHHHhhC-CCCCeeeEeeEE
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKL-QHINLVRLLGFC   92 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~   92 (146)
                      .+....++|...+.||+|+||.|+.           ...+++|.+.... ......+.+|+.++..+ +|+|++++++.+
T Consensus         6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~   85 (293)
T cd05053           6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC   85 (293)
T ss_pred             ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            3445556788999999999998832           1468889886432 22345678899999999 899999999999


Q ss_pred             EcCCceeEEEEecCCCCHHHhhcCC-------------CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           93 LEREEKILVYEYVPNKRLDNFLYEP-------------EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        93 ~~~~~~~lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ...+.+++++||+++|+|..++...             .....+++..+..++.|++.||.|.
T Consensus        86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L  148 (293)
T cd05053          86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFL  148 (293)
T ss_pred             cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence            9888999999999999999998632             1234578899999999999999763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.48  E-value=1.1e-12  Score=89.87  Aligned_cols=108  Identities=23%  Similarity=0.406  Sum_probs=88.1

Q ss_pred             cCcccceeecccCceeec----------CCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--Cce
Q 048150           32 NKFSTDNKLGEGGFGVLP----------NEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLER--EEK   98 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~----------~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~~   98 (146)
                      ..|+..+.||+|+||.|+          .+..+++|.+.... ......+.+|+.++..+.|+|++++.+++...  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            346788899999999982          35679999986442 22356788999999999999999999988765  568


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++||+++++|.+++...  ...+++..+..++.|++.+|.|
T Consensus        84 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~  124 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDY  124 (284)
T ss_pred             EEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999998642  2347889999999999999976

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.48  E-value=6.1e-13  Score=91.46  Aligned_cols=112  Identities=24%  Similarity=0.407  Sum_probs=91.1

Q ss_pred             ccCcccceeecccCceeecCC-----------cEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           31 TNKFSTDNKLGEGGFGVLPNE-----------HEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~~-----------~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ..+|.+...||+|+||.|+.+           ..+++|.+........+.+.+|+.++..++|+|++++++.+...+..+
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI   83 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence            356788899999999988432           347788876444444567889999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCC-------------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPE-------------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++++|.+++....             ....+++..+..++.|++.||.|.
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l  139 (291)
T cd05094          84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL  139 (291)
T ss_pred             EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999996432             123478899999999999999753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.48  E-value=8.6e-13  Score=90.89  Aligned_cols=107  Identities=22%  Similarity=0.309  Sum_probs=90.7

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ..+|...+.||+|+||.|      ..+..+++|.+..........+..|+.++..++|+|++++++.+...+..++++||
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~   97 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY   97 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence            467888999999999988      34567999998644433456788899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++|.+++.+    ..+++..+..++.+++.||.|
T Consensus        98 ~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~  130 (293)
T cd06647          98 LAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEF  130 (293)
T ss_pred             CCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHH
Confidence            999999999854    236788899999999999965

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.48  E-value=1.3e-12  Score=90.14  Aligned_cols=109  Identities=22%  Similarity=0.323  Sum_probs=92.8

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ...+|...+.||.|++|.|      ..+..+++|.+..........+..|+.++..++|+|++++++.+...+.+++++|
T Consensus        17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   96 (296)
T cd06655          17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME   96 (296)
T ss_pred             CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence            3356899999999999988      3567899999865544456678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++++|..++..    ..+++..+..++.+++.+|.|.
T Consensus        97 ~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~L  131 (296)
T cd06655          97 YLAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFL  131 (296)
T ss_pred             ecCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999998853    2478899999999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.48  E-value=6e-13  Score=89.67  Aligned_cols=107  Identities=28%  Similarity=0.367  Sum_probs=88.1

Q ss_pred             ccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           31 TNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      ..+|.+.+.||+|+||.|    ..+..+++|.+...  .....+..|+.++..++|+|++++.+.+.. +..++++||++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~   81 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMS   81 (254)
T ss_pred             HHHceeeeeeccCCCCceEecccCCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCC
Confidence            356888999999999998    45667899988542  234678899999999999999999998865 45789999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++|.+++.... ...+++..+..++.|++.||.|
T Consensus        82 ~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~  115 (254)
T cd05083          82 KGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEY  115 (254)
T ss_pred             CCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHH
Confidence            999999997532 3357888999999999999975

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.48  E-value=1.4e-12  Score=90.38  Aligned_cols=107  Identities=20%  Similarity=0.268  Sum_probs=88.1

Q ss_pred             cCcccceeecccCceeec------CCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++|...+.||+|+||.|+      .+..+++|.+..... .....+.+|+.++..++|+|++++++++...+..++++||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            568889999999999983      456799999864432 2244577899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++ +|.+.+...  ...+++..+..++.|++.||.|
T Consensus        86 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~  119 (309)
T cd07872          86 LDK-DLKQYMDDC--GNIMSMHNVKIFLYQILRGLAY  119 (309)
T ss_pred             CCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHH
Confidence            986 888877542  2347888899999999999976

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.48  E-value=1.2e-12  Score=89.53  Aligned_cols=101  Identities=19%  Similarity=0.210  Sum_probs=81.8

Q ss_pred             ecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCH
Q 048150           40 LGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL  110 (146)
Q Consensus        40 lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L  110 (146)
                      ||+|+||.|      ..|..+++|.+.....   ........|+.++..++|+|++++.+.+......+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            689999988      3477899999853211   1233456789999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       111 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .+++... ....+++..+..++.|++.||.|
T Consensus        81 ~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~  110 (277)
T cd05607          81 KYHIYNV-GERGLEMERVIHYSAQITCGILH  110 (277)
T ss_pred             HHHHHhc-cccCCCHHHHHHHHHHHHHHHHH
Confidence            9888542 23347888899999999999976

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.48  E-value=7.2e-13  Score=90.89  Aligned_cols=112  Identities=24%  Similarity=0.395  Sum_probs=90.4

Q ss_pred             ccCcccceeecccCceeec-----------CCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           31 TNKFSTDNKLGEGGFGVLP-----------NEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~-----------~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      ..+|+..+.||+|+||.|+           .+..+++|.+..... .....+..|+.++..+.|++++++++++...+..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            4578889999999999882           245789998864322 2345688899999999999999999999988899


Q ss_pred             eEEEEecCCCCHHHhhcCCC-------------------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPE-------------------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~-------------------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++|+|.+++....                   ....+++..+..++.|++.||.|.
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~l  146 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYL  146 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999986321                   123467888999999999999763

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.48  E-value=6.2e-13  Score=90.12  Aligned_cols=109  Identities=22%  Similarity=0.294  Sum_probs=88.1

Q ss_pred             HccCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           30 ATNKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ...+|.+.+.||+|+||.|+     .+..+++|.+.... .....+..|+.++..++|++++++++.+. .+..++++||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~   81 (262)
T cd05071           4 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY   81 (262)
T ss_pred             ChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence            44678999999999999883     23468999886432 23456889999999999999999998764 4568999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++|+|.+++... ....+++..+..++.+++.+|.|
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~  117 (262)
T cd05071          82 MSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAY  117 (262)
T ss_pred             CCCCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999753 23347888999999999999976

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.48  E-value=1e-13  Score=102.74  Aligned_cols=105  Identities=23%  Similarity=0.223  Sum_probs=92.4

Q ss_pred             eeecccCceeecCC------cEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCHH
Q 048150           38 NKLGEGGFGVLPNE------HEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLD  111 (146)
Q Consensus        38 ~~lg~g~fg~v~~~------~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~  111 (146)
                      -+||+|.||.|+.+      ..+|+|.++.......+.+..|+.+...++|.||+.+.|++..++++-++||-++||+|.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            47899999999543      468999997666667889999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          112 NFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       112 ~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++.......-.+.....+.+||++||.|.
T Consensus       661 sLLrskWGPlKDNEstm~fYtkQILeGLkYL  691 (1226)
T KOG4279|consen  661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYL  691 (1226)
T ss_pred             HHHHhccCCCccchhHHHHHHHHHHHHhhhh
Confidence            9999876665558889999999999999764

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.48  E-value=1e-12  Score=89.21  Aligned_cols=103  Identities=23%  Similarity=0.295  Sum_probs=80.7

Q ss_pred             eecccCceeecCC--------cEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCC
Q 048150           39 KLGEGGFGVLPNE--------HEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKR  109 (146)
Q Consensus        39 ~lg~g~fg~v~~~--------~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~  109 (146)
                      .||+|+||.|+.+        ..+++|.+..... .....+.+|+.++..++|+|++++++.+...+..++++||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            5899999998432        3567777653322 224457889999999999999999999998899999999999999


Q ss_pred             HHHhhcCCCC--CCCCChHHHHHHHHHHHHHHhh
Q 048150          110 LDNFLYEPEK--QGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       110 L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |.+++.....  ....++.....++.|++.||.|
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~  115 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLW  115 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHH
Confidence            9999975322  2234677788999999999975

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.48  E-value=2e-12  Score=88.25  Aligned_cols=107  Identities=18%  Similarity=0.293  Sum_probs=88.6

Q ss_pred             cCcccceeecccCceeec------CCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +-|...+.||+|+||.|+      .+..+++|.+..... .....+..|+.++..+.|+|++++++.+...+..++++||
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   83 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY   83 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence            346778899999999883      456899998754322 2345678899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++|.+++.+    ..+++..+..++.+++.++.|.
T Consensus        84 ~~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~l  117 (277)
T cd06641          84 LGGGSALDLLEP----GPLDETQIATILREILKGLDYL  117 (277)
T ss_pred             CCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH
Confidence            999999998853    2478899999999999999753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.47  E-value=5.4e-13  Score=92.69  Aligned_cols=116  Identities=22%  Similarity=0.333  Sum_probs=92.1

Q ss_pred             HHHHccCcccceeecccCceeecC-------------CcEEEEEEeccCC-cccHHHHHHHHHHHhhC-CCCCeeeEeeE
Q 048150           27 IEDATNKFSTDNKLGEGGFGVLPN-------------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKL-QHINLVRLLGF   91 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v~~-------------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~l~~~   91 (146)
                      |.....+|.+.+.||+|+||.|+.             ...+++|.+.... ......+..|+.++..+ .|+|+++++++
T Consensus         7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~   86 (314)
T cd05099           7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGV   86 (314)
T ss_pred             ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence            445557788999999999998842             2358888876432 22345678899999999 69999999999


Q ss_pred             EEcCCceeEEEEecCCCCHHHhhcCCC-------------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           92 CLEREEKILVYEYVPNKRLDNFLYEPE-------------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        92 ~~~~~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +...+..++++||+++|+|.+++....             ....+++..+..++.|++.||.|.
T Consensus        87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l  150 (314)
T cd05099          87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYL  150 (314)
T ss_pred             EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHH
Confidence            988888999999999999999996522             123478888999999999999763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.47  E-value=6.3e-13  Score=89.94  Aligned_cols=110  Identities=22%  Similarity=0.267  Sum_probs=91.4

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      +|...+.||.|++|.|      ..+..+++|.+.... ......+.+|+..+..+.|+|++++++.+...+.+++++||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            5777889999999988      346789999886543 233566889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccCC
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~  146 (146)
                      ++++|.+++....  ..+++..+..++.|++.+|.  |+|+
T Consensus        82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~--~lH~  118 (265)
T cd06605          82 DGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLT--YLHE  118 (265)
T ss_pred             CCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHH--HHcC
Confidence            9999999986532  45788899999999999996  5553

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.47  E-value=1.8e-12  Score=88.60  Aligned_cols=103  Identities=15%  Similarity=0.156  Sum_probs=85.6

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++|...+.||+|+||.|      ..+..+++|.+.... ......+..|+.++..+.|+|++++++.+...+..++++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            35778899999999988      356789999986432 22345688999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++|..+.       .+++..+..++.|++.||.|
T Consensus        81 ~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~  110 (279)
T cd06619          81 MDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTY  110 (279)
T ss_pred             CCCCChHHhh-------cCCHHHHHHHHHHHHHHHHH
Confidence            9999986542       26788889999999999975

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.47  E-value=9.5e-13  Score=91.68  Aligned_cols=101  Identities=20%  Similarity=0.189  Sum_probs=81.4

Q ss_pred             eeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|      ..+..+|+|.+....   .........|..++... .||+++++++.+...+.++++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            36899999998      345689999986431   12344556677777654 899999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+|.+++..   ...+++..+..++.|++.||.|
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~  111 (316)
T cd05619          81 GDLMFHIQS---CHKFDLPRATFYAAEIICGLQF  111 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHH
Confidence            999999864   2347888899999999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.47  E-value=1.7e-12  Score=88.80  Aligned_cols=108  Identities=23%  Similarity=0.297  Sum_probs=89.4

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ++|.....||+|+||.|      ..+..+++|.+....  ....+.+..|+.++..+.|+|++++++.+......++++|
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            36788899999999988      246789999886432  2234567889999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |++++.|..++..   ...+++..+..++.|++.+|.|.
T Consensus        81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~ql~~~l~~L  116 (286)
T cd07847          81 YCDHTVLNELEKN---PRGVPEHLIKKIIWQTLQAVNFC  116 (286)
T ss_pred             ccCccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999888877643   23488999999999999999754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.47  E-value=6.8e-13  Score=92.53  Aligned_cols=102  Identities=19%  Similarity=0.185  Sum_probs=83.2

Q ss_pred             eeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|      ..+..+|+|.+...   .......+..|..++..+ .|++++++++++...+.++++|||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            36899999998      35678999998643   122345567788888766 799999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        81 g~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~l  112 (320)
T cd05590          81 GDLMFHIQK---SRRFDEARARFYAAEITSALMFL  112 (320)
T ss_pred             chHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999998864   23478899999999999999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.47  E-value=2.9e-13  Score=92.35  Aligned_cols=105  Identities=17%  Similarity=0.301  Sum_probs=87.3

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      .|...+.||+|+||.|      ..+..+++|.+.... ......+..|+.++..+.|+|++++++.+...+..++++||+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            4566778999999988      245678999886432 223456889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++|.+++..    ..+++..+..++.+++.|+.|
T Consensus        85 ~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~  116 (277)
T cd06642          85 GGGSALDLLKP----GPLEETYIATILREILKGLDY  116 (277)
T ss_pred             CCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHH
Confidence            99999998853    347888999999999999975

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.47  E-value=4.1e-13  Score=94.49  Aligned_cols=89  Identities=25%  Similarity=0.481  Sum_probs=70.9

Q ss_pred             HHHccCcccceeecccCceeec-----------CCcEEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCCeeeEeeEEEc
Q 048150           28 EDATNKFSTDNKLGEGGFGVLP-----------NEHEIAVKRLSRSSS-QGAQEINNEVVVVAKL-QHINLVRLLGFCLE   94 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v~-----------~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~   94 (146)
                      ..+.++|++.+.||+|+||.|+           .+..+|+|.+..... .....+.+|+.++..+ +|+|++++++.+..
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   82 (343)
T cd05103           3 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK   82 (343)
T ss_pred             ccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec
Confidence            3455789999999999999983           235799999864322 2345678899999999 68999999988765


Q ss_pred             C-CceeEEEEecCCCCHHHhhcC
Q 048150           95 R-EEKILVYEYVPNKRLDNFLYE  116 (146)
Q Consensus        95 ~-~~~~lv~e~~~~g~L~~~l~~  116 (146)
                      . ...++++||+++|+|.+++..
T Consensus        83 ~~~~~~lv~ey~~~g~L~~~i~~  105 (343)
T cd05103          83 PGGPLMVIVEFCKFGNLSNYLRS  105 (343)
T ss_pred             CCCceEEEEeccCCCcHHHHHHh
Confidence            4 457899999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.47  E-value=6.8e-13  Score=90.70  Aligned_cols=111  Identities=27%  Similarity=0.446  Sum_probs=89.6

Q ss_pred             cCcccceeecccCceeecCC-----------cEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           32 NKFSTDNKLGEGGFGVLPNE-----------HEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~~~-----------~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ++|++.+.||+|+||.|+.+           ..+++|.+..... .....+.+|+.++..++|++++++++++...+..+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            46888999999999998322           3588888864322 23456889999999999999999999998888899


Q ss_pred             EEEEecCCCCHHHhhcCCCC-------------CCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEK-------------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++|+|.+++.....             ...+++..+..++.|++.||.|.
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~l  140 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYL  140 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999865211             14578888999999999999753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.47  E-value=1.2e-12  Score=91.56  Aligned_cols=106  Identities=16%  Similarity=0.296  Sum_probs=84.9

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC-----cee
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLERE-----EKI   99 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~-----~~~   99 (146)
                      +|.+.+.||+|+||.|      ..+..+|+|.+...  .......+.+|+.++..++|+|++++.+++....     .++
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            4778899999999988      35678999998642  1223456789999999999999999998876432     479


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+. ++|.+++..   ...+++..+..++.|++.||.|.
T Consensus        81 lv~e~~~-~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~L  119 (338)
T cd07859          81 VVFELME-SDLHQVIKA---NDDLTPEHHQFFLYQLLRALKYI  119 (338)
T ss_pred             EEEecCC-CCHHHHHHh---cccCCHHHHHHHHHHHHHHHHHH
Confidence            9999996 589888854   33488999999999999999753

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.47  E-value=3.5e-14  Score=96.69  Aligned_cols=102  Identities=18%  Similarity=0.292  Sum_probs=91.0

Q ss_pred             ceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEecCCCC
Q 048150           37 DNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKR  109 (146)
Q Consensus        37 ~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~g~  109 (146)
                      .+.||+|+++.|      ..|..+|||++.+........+.+|+.++..+ .|+||+.|+++|++....|||+|-+.||+
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGp  162 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGP  162 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCch
Confidence            478999999987      78889999999876555688899999999988 69999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          110 LDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       110 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |...|++   ...+.+..+.+++++|+.||.|
T Consensus       163 lLshI~~---~~~F~E~EAs~vvkdia~aLdF  191 (463)
T KOG0607|consen  163 LLSHIQK---RKHFNEREASRVVKDIASALDF  191 (463)
T ss_pred             HHHHHHH---hhhccHHHHHHHHHHHHHHHHH
Confidence            9999975   3458999999999999999964

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.47  E-value=1.6e-12  Score=87.88  Aligned_cols=107  Identities=24%  Similarity=0.312  Sum_probs=90.4

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ--GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|...+.||+|+|+.|      ..+..+++|.+......  ....+..|+.++..++|++++++++.+...+..++++||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            4778899999999988      25678999998754332  467788999999999999999999999888999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++|.+++..   ...+++..+..++.+++.||.|.
T Consensus        81 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~l  115 (264)
T cd06626          81 CSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYL  115 (264)
T ss_pred             CCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHH
Confidence            999999999865   23467888999999999999753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.47  E-value=4e-13  Score=90.70  Aligned_cols=106  Identities=19%  Similarity=0.202  Sum_probs=90.5

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      +|...+.||.|+|+.|      ..+..+++|.+....   ......+..|+.++..++|||++++++.+...+..++++|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            4778899999999988      357789999986432   2235678899999999999999999999998999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+.+++|.+.+...   ..+++..+..++.|+++||.|
T Consensus        81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~  115 (258)
T cd05578          81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEY  115 (258)
T ss_pred             CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHH
Confidence            99999999998652   458889999999999999975

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.47  E-value=8.7e-15  Score=107.41  Aligned_cols=113  Identities=18%  Similarity=0.220  Sum_probs=93.5

Q ss_pred             HccCcccceeecccCceeecC------CcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVLPN------EHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~~------~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      +.+-|.+...||.|+||+|+.      +...|.|++.....+....++-|+.+|..+.||+|++|++.|...+.+|++.|
T Consensus        30 P~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE  109 (1187)
T KOG0579|consen   30 PRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE  109 (1187)
T ss_pred             HHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence            334467778899999999932      33457777765555568889999999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccCC
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~  146 (146)
                      ||.||-....+....  ..+.+.++..++.+++.+|  |||||
T Consensus       110 FC~GGAVDaimlEL~--r~LtE~QIqvvc~q~ldAL--n~LHs  148 (1187)
T KOG0579|consen  110 FCGGGAVDAIMLELG--RVLTEDQIQVVCYQVLDAL--NWLHS  148 (1187)
T ss_pred             ecCCchHhHHHHHhc--cccchHHHHHHHHHHHHHH--HHHhh
Confidence            999999988887543  3489999999999999998  56664

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.47  E-value=9e-13  Score=90.03  Aligned_cols=107  Identities=24%  Similarity=0.381  Sum_probs=87.4

Q ss_pred             cCcccceeecccCceeecC------Cc----EEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           32 NKFSTDNKLGEGGFGVLPN------EH----EIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~~------~~----~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      .+|...+.||+|+||.|+.      |.    .+++|.+..... .....+.+|+.++..+.|+|++++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            5678889999999998832      22    478888754432 234678899999999999999999998876 78899


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++||+++|+|.+++.+.  ...+++..+..++.|++.||.|
T Consensus        86 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~  124 (279)
T cd05057          86 ITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSY  124 (279)
T ss_pred             EEecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999998653  2348899999999999999975

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.47  E-value=1.6e-12  Score=88.93  Aligned_cols=107  Identities=18%  Similarity=0.258  Sum_probs=90.2

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|.+.+.||+|+||.|      ..|..+++|.+....  ......+..|+.++..+.|+|++++++.+...+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            4778899999999988      356789999986543  22356788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      + +++|.+++....  ..+++..+..++.|++.+|.|.
T Consensus        81 ~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~l  115 (286)
T cd07832          81 M-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYM  115 (286)
T ss_pred             c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHH
Confidence            9 999999986532  4588999999999999999764

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.47  E-value=9.6e-13  Score=91.69  Aligned_cols=101  Identities=23%  Similarity=0.243  Sum_probs=83.1

Q ss_pred             eeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|      ..+..+|+|.+....   ......+..|..++..+ .|++++++++++...+.++++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36899999998      246689999986431   22345567788888877 799999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+|...+.+   ...+++..+..++.|++.||.|
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~  111 (318)
T cd05570          81 GDLMFHIQR---SGRFDEPRARFYAAEIVLGLQF  111 (318)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHH
Confidence            999988864   2358899999999999999976

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.47  E-value=7.4e-13  Score=90.19  Aligned_cols=113  Identities=20%  Similarity=0.324  Sum_probs=90.5

Q ss_pred             HccCcccceeecccCceeecC-----------CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           30 ATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      ..++|...+.||+|+||.|+.           +..+++|.+.... ......+.+|+.++..+.|++++++++.+.....
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   83 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP   83 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence            446788899999999998832           2468999875432 2234567889999999999999999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCCC-------CCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEK-------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .++++||+++|+|.+++.....       ...+++..+..++.|++.||.|.
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l  135 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYL  135 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999864221       22367888999999999999763

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.47  E-value=1.3e-12  Score=90.37  Aligned_cols=110  Identities=26%  Similarity=0.457  Sum_probs=87.0

Q ss_pred             cCcccceeecccCceeec------CCc--EEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEE
Q 048150           32 NKFSTDNKLGEGGFGVLP------NEH--EIAVKRLSRSSS-QGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~------~~~--~~a~k~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ++|.+.+.||+|+||.|+      .+.  .+++|.+..... .....+..|+.++..+ +|+|++++++++...+.++++
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            467888999999999882      232  356766643222 2345678899999999 899999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCC-------------CCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEPE-------------KQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +||+++|+|.+++....             ....+++..+..++.|++.|+.|
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~  139 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDY  139 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHH
Confidence            99999999999986421             12357889999999999999975

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.47  E-value=1.6e-12  Score=88.80  Aligned_cols=108  Identities=24%  Similarity=0.423  Sum_probs=89.1

Q ss_pred             cCcccceeecccCceeec----------CCcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEEc--CCce
Q 048150           32 NKFSTDNKLGEGGFGVLP----------NEHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCLE--REEK   98 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~----------~~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~~--~~~~   98 (146)
                      ++|...+.||+|+||.|+          .+..+++|.+...... ....+..|+.++..+.|++++++.+++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            467778999999999882          2457999998754332 35678899999999999999999998876  5578


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++||+++++|.+++...  ...+++..+..++.|++.||.|
T Consensus        84 ~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~  124 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDY  124 (284)
T ss_pred             EEEEecCCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999653  2248899999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.47  E-value=9.9e-13  Score=91.71  Aligned_cols=102  Identities=20%  Similarity=0.186  Sum_probs=82.5

Q ss_pred             eeecccCceeec------CCcEEEEEEeccC---CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVLP------NEHEIAVKRLSRS---SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v~------~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|+      .+..+|+|.+...   .......+..|..++..+ .|++++.+++++...+.++++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            368999999982      4568999998643   122344567788888765 899999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+|...+..   ...+++..+..++.|++.||.|.
T Consensus        81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~L  112 (321)
T cd05591          81 GDLMFQIQR---SRKFDEPRSRFYAAEVTLALMFL  112 (321)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999988864   23478888999999999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.47  E-value=1e-12  Score=91.52  Aligned_cols=101  Identities=22%  Similarity=0.226  Sum_probs=80.3

Q ss_pred             eeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|      ..+..+|+|.+....   .........|..++... .|++++++++.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36899999998      345679999986431   22334455666666654 899999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+|..++..   ...+++..+..++.|++.||.|
T Consensus        81 g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~  111 (316)
T cd05592          81 GDLMFHIQS---SGRFDEARARFYAAEIICGLQF  111 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHH
Confidence            999998864   2347888999999999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.47  E-value=5.1e-13  Score=93.61  Aligned_cols=117  Identities=21%  Similarity=0.314  Sum_probs=92.1

Q ss_pred             HHHHHccCcccceeecccCceeecCC-------------cEEEEEEeccCC-cccHHHHHHHHHHHhhC-CCCCeeeEee
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVLPNE-------------HEIAVKRLSRSS-SQGAQEINNEVVVVAKL-QHINLVRLLG   90 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v~~~-------------~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~l~~   90 (146)
                      +|.....+|.+.+.||+|+||.|+..             ..+++|.+.... ......+..|+.++.++ +|+|++++++
T Consensus         6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~   85 (334)
T cd05100           6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLG   85 (334)
T ss_pred             ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence            34445567889999999999988321             257888876432 22356788999999999 8999999999


Q ss_pred             EEEcCCceeEEEEecCCCCHHHhhcCCC-------------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           91 FCLEREEKILVYEYVPNKRLDNFLYEPE-------------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        91 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+...+.+++++||+++|+|.+++....             ....+++..+..++.|++.||.|.
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L  150 (334)
T cd05100          86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYL  150 (334)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH
Confidence            9998889999999999999999986421             123477888999999999999763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.47  E-value=1.3e-12  Score=88.84  Aligned_cols=104  Identities=26%  Similarity=0.291  Sum_probs=82.1

Q ss_pred             eecccCceeecCC--------cEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCC
Q 048150           39 KLGEGGFGVLPNE--------HEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKR  109 (146)
Q Consensus        39 ~lg~g~fg~v~~~--------~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~  109 (146)
                      .||+|+||.|+.+        ..+++|.+..... .....+.+|+.++..++|+|++++++.+......++++||+++|+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            5899999998432        3578888764432 223467889999999999999999999988888999999999999


Q ss_pred             HHHhhcCCC--CCCCCChHHHHHHHHHHHHHHhhh
Q 048150          110 LDNFLYEPE--KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       110 L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |.+++....  ....+++..+..++.|++.||.|.
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~l  116 (269)
T cd05087          82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHL  116 (269)
T ss_pred             HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHH
Confidence            999986422  123456777888999999999763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.47  E-value=4.2e-13  Score=97.89  Aligned_cols=106  Identities=19%  Similarity=0.270  Sum_probs=89.8

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC-C-----CCeeeEeeEEEcCCceeE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ-H-----INLVRLLGFCLEREEKIL  100 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~-h-----~~i~~l~~~~~~~~~~~l  100 (146)
                      +|.+.++||+|.||+|      ..+..||+|+++. .......-..|+.+|..++ |     -|++.++++|...+++||
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN-~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKN-KKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeecc-ChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            6889999999999998      5678999999963 2334455668889998886 4     379999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+|.+.. +|++++.++... .++...+..++.||+.+|.+
T Consensus       266 VfELL~~-NLYellK~n~f~-Glsl~~ir~~~~Qil~~L~~  304 (586)
T KOG0667|consen  266 VFELLST-NLYELLKNNKFR-GLSLPLVRKFAQQILTALLF  304 (586)
T ss_pred             eehhhhh-hHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHH
Confidence            9998877 999999886554 48999999999999999976

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.46  E-value=1.3e-12  Score=87.96  Aligned_cols=107  Identities=18%  Similarity=0.261  Sum_probs=91.3

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      .++|...+.||+|+||.|      ..+..+++|.+....  ....+..|+.++..++|+|++++.+.+......++++||
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE--DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH--HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            367888999999999988      235788999886432  267788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++|.+++...  ...+++..+..++.|++.||.|
T Consensus        80 ~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~~l~~  114 (256)
T cd06612          80 CGAGSVSDIMKIT--NKTLTEEEIAAILYQTLKGLEY  114 (256)
T ss_pred             CCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHH
Confidence            9999999998642  3458899999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.46  E-value=5.4e-13  Score=89.92  Aligned_cols=106  Identities=26%  Similarity=0.399  Sum_probs=88.6

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccCCcccH--HHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGA--QEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~--~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      |+..+.||+|+||.|      ..+..+++|.+........  .....|+.++..+.|++++++.+.+......++++|++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            567899999999998      4556899999976543332  23456899999999999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++|.+++.   ....+++..+..++.|+++||.+.
T Consensus        81 ~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~L  114 (260)
T PF00069_consen   81 PGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYL  114 (260)
T ss_dssp             TTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccc---cccccccccccccccccccccccc
Confidence            9999999996   234578999999999999999764

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.46  E-value=1.8e-12  Score=88.29  Aligned_cols=105  Identities=15%  Similarity=0.215  Sum_probs=89.5

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      +|.....||.|++|.|      ..+..+++|.+.... ......+..|+.++..++|+|++++.+.+.....+++++||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            5778889999999988      356789999986442 223456788999999999999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++|.+++...    .+++..+..++.|++.+|.|
T Consensus        82 ~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~  113 (274)
T cd06609          82 GGGSCLDLLKPG----KLDETYIAFILREVLLGLEY  113 (274)
T ss_pred             CCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHH
Confidence            999999998642    58899999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.46  E-value=1.1e-12  Score=88.32  Aligned_cols=109  Identities=17%  Similarity=0.283  Sum_probs=90.1

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|...+.||+|+||.|      ..|..+++|.+....  ......+.+|+.++..++|+|++++++.+...+.+++++||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            4778899999999988      356788999986432  12345677899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++|.+++.... ...+++.....++.+++.+|.|.
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~l  117 (257)
T cd08225          81 CDGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHI  117 (257)
T ss_pred             CCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999986532 33478999999999999999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.46  E-value=2.1e-14  Score=98.10  Aligned_cols=111  Identities=20%  Similarity=0.154  Sum_probs=92.2

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcc---cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ---GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      -++|...++||+|.||+|      ..+..+|+|++++.---   ....-..|.+++...+||.+..|--.|.+.+.+|+|
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            367899999999999998      67888999998754221   233456788999999999999998889999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccCC
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~  146 (146)
                      |||+.||.|..++..   ...+++.....+...|+.+|.  ||||
T Consensus       247 MeyanGGeLf~HLsr---er~FsE~RtRFYGaEIvsAL~--YLHs  286 (516)
T KOG0690|consen  247 MEYANGGELFFHLSR---ERVFSEDRTRFYGAEIVSALG--YLHS  286 (516)
T ss_pred             EEEccCceEeeehhh---hhcccchhhhhhhHHHHHHhh--hhhh
Confidence            999999999988854   445888889999999998885  5664

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.46  E-value=1.5e-12  Score=88.40  Aligned_cols=108  Identities=20%  Similarity=0.408  Sum_probs=89.0

Q ss_pred             cCcccceeecccCceeec------CC---cEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           32 NKFSTDNKLGEGGFGVLP------NE---HEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~------~~---~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      .+|...+.||+|+||.|+      .+   ..+++|.+.... ......+..|+.++..+.|+|++++.+.+...+..+++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            467888999999999883      22   268888876432 22356688899999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +||+++++|.+++...  ...+++..+..++.+++.|+.|
T Consensus        85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~al~~  122 (268)
T cd05063          85 TEYMENGALDKYLRDH--DGEFSSYQLVGMLRGIAAGMKY  122 (268)
T ss_pred             EEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999998653  2457888999999999999976

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.46  E-value=2.1e-12  Score=88.62  Aligned_cols=107  Identities=19%  Similarity=0.296  Sum_probs=88.8

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++|...+.||+|++|.|      ..+..+++|.+...... ....+.+|+.++..++|+|++++++++...+..++++||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            67888999999999998      25678999998643222 234567899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++ +|.+++...  ...+++..+..++.|++.||.|
T Consensus        85 ~~~-~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~  118 (291)
T cd07844          85 LDT-DLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAY  118 (291)
T ss_pred             CCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHH
Confidence            985 899888643  2357889999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.46  E-value=3.1e-13  Score=95.18  Aligned_cols=108  Identities=17%  Similarity=0.215  Sum_probs=85.1

Q ss_pred             HHHccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHh--hCCCCCeeeEeeEEEcCC----c
Q 048150           28 EDATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVA--KLQHINLVRLLGFCLERE----E   97 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~--~l~h~~i~~l~~~~~~~~----~   97 (146)
                      .-..+.+.+.+.+|+|.||.|    +.|..||||++...   +-..+-+|..+..  .++|+||+.+++.-..++    .
T Consensus       207 RTiarqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ  283 (513)
T KOG2052|consen  207 RTIARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ  283 (513)
T ss_pred             HhhhheeEEEEEecCccccceeeccccCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence            345567889999999999999    67889999999533   2233445555555  569999999987765543    3


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+++|-+.|+|.++|..    ..++....+.++.-++.||++.
T Consensus       284 LwLvTdYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHL  324 (513)
T KOG2052|consen  284 LWLVTDYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHL  324 (513)
T ss_pred             EEEeeecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHH
Confidence            8999999999999999954    3588889999999999999643

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.46  E-value=2.4e-12  Score=87.26  Aligned_cols=107  Identities=20%  Similarity=0.275  Sum_probs=86.3

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC-----cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--Cce
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-----SQGAQEINNEVVVVAKLQHINLVRLLGFCLER--EEK   98 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~~   98 (146)
                      ++|...+.||+|+||.|      ..+..+++|.+....     ......+..|+.++..+.|++++++++++...  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            57888999999999998      346789999875321     11245678899999999999999999988664  457


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++||+++++|.+++.+.   ..+++.....++.|++.+|.|
T Consensus        82 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~  121 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSY  121 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHH
Confidence            8999999999999988642   336788889999999999965

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.46  E-value=6.4e-13  Score=91.87  Aligned_cols=115  Identities=22%  Similarity=0.330  Sum_probs=91.5

Q ss_pred             HHHccCcccceeecccCceeecC-------------CcEEEEEEeccCC-cccHHHHHHHHHHHhhC-CCCCeeeEeeEE
Q 048150           28 EDATNKFSTDNKLGEGGFGVLPN-------------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKL-QHINLVRLLGFC   92 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v~~-------------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~   92 (146)
                      .....+|.+...||+|+||.|+.             +..+++|.+.... ......+..|+.++..+ .|+|++++++.+
T Consensus        11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~   90 (304)
T cd05101          11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC   90 (304)
T ss_pred             cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence            34556788899999999999842             2358888875432 23356788999999999 899999999999


Q ss_pred             EcCCceeEEEEecCCCCHHHhhcCCCC-------------CCCCChHHHHHHHHHHHHHHhhh
Q 048150           93 LEREEKILVYEYVPNKRLDNFLYEPEK-------------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        93 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ......++++||+++|+|.+++.+...             ...+++..+..++.|++.||.|.
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L  153 (304)
T cd05101          91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYL  153 (304)
T ss_pred             ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHH
Confidence            998999999999999999999865321             23477888999999999999763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.46  E-value=1.8e-12  Score=88.47  Aligned_cols=106  Identities=16%  Similarity=0.309  Sum_probs=88.4

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ..|...+.||.|+||.|      ..+..+++|.+.... ......+..|+.++..+.|++++++.+.+...+..++++||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            45677788999999988      245678999886432 23356788899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++|+|.+++..    ..+++..+..++.+++.||.|
T Consensus        84 ~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~  116 (277)
T cd06640          84 LGGGSALDLLRA----GPFDEFQIATMLKEILKGLDY  116 (277)
T ss_pred             CCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHH
Confidence            999999998854    247888889999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.46  E-value=5.9e-13  Score=91.08  Aligned_cols=108  Identities=24%  Similarity=0.318  Sum_probs=89.1

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ++|...+.||+|+||.|      ..+..+++|.+.....  .....+..|+.++..+.|+|++++++++...+..++++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            36788899999999988      2467899998754322  224567789999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++++|..+...   ...+++..+..++.|++.+|.|.
T Consensus        81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~L  116 (286)
T cd07846          81 FVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFC  116 (286)
T ss_pred             cCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999988887643   23488999999999999999763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.46  E-value=1.7e-12  Score=89.47  Aligned_cols=110  Identities=24%  Similarity=0.403  Sum_probs=87.5

Q ss_pred             cCcccceeecccCceeec------CC--cEEEEEEeccC-CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEE
Q 048150           32 NKFSTDNKLGEGGFGVLP------NE--HEIAVKRLSRS-SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~------~~--~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ++|.+.+.||+|+||.|+      .+  ..+++|.++.. .......+..|+.++.++ +||+++++++++...+.++++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            578889999999999883      22  24677777532 222345688899999888 799999999999988899999


Q ss_pred             EEecCCCCHHHhhcCCC-------------CCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEPE-------------KQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +||+++|+|.+++....             ....+++..+..++.|++.||.|
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~  134 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQY  134 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999986421             11247888999999999999976

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.45  E-value=1.7e-12  Score=88.65  Aligned_cols=111  Identities=25%  Similarity=0.427  Sum_probs=90.0

Q ss_pred             ccCcccceeecccCceeec-----------CCcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           31 TNKFSTDNKLGEGGFGVLP-----------NEHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~-----------~~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      .++|.+.+.||+|+||.|+           .+..+++|.+...... ....+..|+.++..++|++++++++.+...+..
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            4568889999999999882           3456888887543322 234688899999999999999999999888889


Q ss_pred             eEEEEecCCCCHHHhhcCCC----CCCCCChHHHHHHHHHHHHHHhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPE----KQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++||+++++|.+++....    ....+++..+..++.|++.||.|
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~  131 (277)
T cd05036          85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKY  131 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999986532    12358889999999999999975

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.45  E-value=1.7e-12  Score=87.82  Aligned_cols=110  Identities=22%  Similarity=0.272  Sum_probs=87.9

Q ss_pred             HccCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           30 ATNKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ...+|.+...||+|++|.|+     .+..+++|.+.... .....+..|+.++..+.|++++++++++. .+..+++|||
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~   81 (260)
T cd05069           4 PRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF   81 (260)
T ss_pred             ChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence            34668889999999999983     23468899875432 23567888999999999999999998774 5668899999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|+|.+++... ....+++..+..++.+++.||.|.
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~l  118 (260)
T cd05069          82 MGKGSLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYI  118 (260)
T ss_pred             CCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999653 233478889999999999999753

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.45  E-value=1.6e-12  Score=93.05  Aligned_cols=101  Identities=14%  Similarity=0.098  Sum_probs=85.5

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      .+|...+.||+|+||.|      ..+..+|+|...      ...+.+|+.++..++||||+++++++......++++|++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~  165 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY  165 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence            57999999999999998      456788998643      234678999999999999999999999889999999998


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      . ++|..++..   ...+++..+..++.|++.||.|.
T Consensus       166 ~-~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~yl  198 (391)
T PHA03212        166 K-TDLYCYLAA---KRNIAICDILAIERSVLRAIQYL  198 (391)
T ss_pred             C-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            6 588888754   23478899999999999999864

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=2.6e-12  Score=86.21  Aligned_cols=106  Identities=20%  Similarity=0.322  Sum_probs=90.4

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|...+.||+|++|.|      ..+..+++|.+.....  .....+..|+.++..+.|++++++.+++...+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            4678899999999988      2567899999865433  3456788999999999999999999999988999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++|.+++...   ..+++..+..++.+++.+|.|
T Consensus        81 ~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~  114 (254)
T cd06627          81 AENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAY  114 (254)
T ss_pred             CCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHH
Confidence            9999999998652   458899999999999999965

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.45  E-value=2.1e-12  Score=88.73  Aligned_cols=110  Identities=22%  Similarity=0.356  Sum_probs=87.4

Q ss_pred             CcccceeecccCceeecCC-----------cEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           33 KFSTDNKLGEGGFGVLPNE-----------HEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v~~~-----------~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      +|.+.+.||+|+||.|+.+           ..+++|.+..... .....+..|+.++..++||||+++++.+...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            4677889999999998432           3577887754322 224568889999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCC---------------------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPE---------------------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~---------------------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||+.+|+|.+++....                     ....+++..+..++.|++.||.|.
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L  143 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYL  143 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHH
Confidence            999999999999875321                     123478889999999999999763

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.45  E-value=1.4e-12  Score=91.14  Aligned_cols=101  Identities=20%  Similarity=0.193  Sum_probs=80.4

Q ss_pred             eeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHH-HHhhCCCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVV-VVAKLQHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~-~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|      ..|..+|+|++....   ......+..|.. ++..++|+|++++++.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            36899999998      357789999986431   112334455554 46778999999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+|...+..   ...+++..+..++.|++.||.|
T Consensus        81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~  111 (325)
T cd05604          81 GELFFHLQR---ERSFPEPRARFYAAEIASALGY  111 (325)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHH
Confidence            999988854   3457899999999999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.45  E-value=1.6e-12  Score=87.65  Aligned_cols=108  Identities=24%  Similarity=0.320  Sum_probs=88.6

Q ss_pred             ccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEE-cCCceeEEEEec
Q 048150           31 TNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCL-EREEKILVYEYV  105 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~-~~~~~~lv~e~~  105 (146)
                      -.+|...+.||+|+||.|    ..|..+++|.+...  ...+.+..|+.++..++|++++++++.+. ..+..++++||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            357888999999999988    45678899987532  23567889999999999999999998765 445689999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++|.+++.+.. ...+++..+..++.+++.||.|
T Consensus        83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~  117 (256)
T cd05082          83 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEY  117 (256)
T ss_pred             CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999987532 3347888999999999999976

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.45  E-value=6.5e-13  Score=93.31  Aligned_cols=116  Identities=21%  Similarity=0.329  Sum_probs=90.5

Q ss_pred             HHHHccCcccceeecccCceeecCC-----------cEEEEEEeccCC-cccHHHHHHHHHHHhhC-CCCCeeeEeeEEE
Q 048150           27 IEDATNKFSTDNKLGEGGFGVLPNE-----------HEIAVKRLSRSS-SQGAQEINNEVVVVAKL-QHINLVRLLGFCL   93 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v~~~-----------~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~   93 (146)
                      |..+.++|++.+.||+|+||.|+.+           ..+++|.+.... ....+.+..|+.++..+ +|+|++++++.+.
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~   81 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT   81 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence            4455678999999999999999422           469999886432 22245677899999999 8999999999886


Q ss_pred             cC-CceeEEEEecCCCCHHHhhcCCCC-----------------------------------------------------
Q 048150           94 ER-EEKILVYEYVPNKRLDNFLYEPEK-----------------------------------------------------  119 (146)
Q Consensus        94 ~~-~~~~lv~e~~~~g~L~~~l~~~~~-----------------------------------------------------  119 (146)
                      .. ..+++++||+++++|.+++.....                                                     
T Consensus        82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (337)
T cd05054          82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE  161 (337)
T ss_pred             cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence            54 568899999999999998854211                                                     


Q ss_pred             -----CCCCChHHHHHHHHHHHHHHhhh
Q 048150          120 -----QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       120 -----~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                           ...+++..+..++.|++.||.|.
T Consensus       162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~l  189 (337)
T cd05054         162 GDELYKEPLTLEDLISYSFQVARGMEFL  189 (337)
T ss_pred             hhHHhhcCCCHHHHHHHHHHHHHHHHHH
Confidence                 12578889999999999999764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.45  E-value=2.5e-12  Score=87.97  Aligned_cols=106  Identities=25%  Similarity=0.375  Sum_probs=86.3

Q ss_pred             CcccceeecccCceeec----------CCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--Ccee
Q 048150           33 KFSTDNKLGEGGFGVLP----------NEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLER--EEKI   99 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v~----------~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~~~   99 (146)
                      .|...+.||+|+||.|+          .+..+++|.+..... .....+..|+.++..++|+|++++.+++...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (283)
T cd05080           5 YLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ   84 (283)
T ss_pred             hceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence            34788999999999882          355789999865422 2356678899999999999999999987653  3588


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|||+++++|.+++..    ..+++..+..++.|++.||.|.
T Consensus        85 lv~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~l  123 (283)
T cd05080          85 LIMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYL  123 (283)
T ss_pred             EEecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999854    2488999999999999999763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.45  E-value=4e-13  Score=92.52  Aligned_cols=106  Identities=22%  Similarity=0.278  Sum_probs=87.7

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      .|.....||+|+||.|      ..+..+++|.+..........+..|+..+..++|+|++++++.+...+..++++||++
T Consensus        23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~  102 (292)
T cd06658          23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE  102 (292)
T ss_pred             HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence            3444567999999988      3567899999865444445668899999999999999999999999999999999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|.+++..    ..+++..+..++.|++.||.|.
T Consensus       103 ~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~L  134 (292)
T cd06658         103 GGALTDIVTH----TRMNEEQIATVCLSVLRALSYL  134 (292)
T ss_pred             CCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH
Confidence            9999998743    2478889999999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.44  E-value=1.8e-12  Score=90.45  Aligned_cols=102  Identities=20%  Similarity=0.201  Sum_probs=80.7

Q ss_pred             eeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHH-HHhhCCCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVV-VVAKLQHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~-~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|      ..|..+|+|.+....   ......+..|.. ++..++|+|++++++.+...+..+++|||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            36899999998      367789999986431   112334445544 56778999999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+|...+..   ...+++..+..++.|++.||.|.
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~l  112 (323)
T cd05575          81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYL  112 (323)
T ss_pred             CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999998864   33578888999999999999763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.44  E-value=2.9e-12  Score=86.28  Aligned_cols=104  Identities=32%  Similarity=0.463  Sum_probs=86.8

Q ss_pred             eeecccCceee------cC---CcEEEEEEeccCCccc-HHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVL------PN---EHEIAVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v------~~---~~~~a~k~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|      ..   +..+++|.+....... ...+..|+..+..++|++++++++++......++++||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            36899999988      22   6688999987543332 56788999999999999999999999998899999999999


Q ss_pred             CCHHHhhcCCCC------CCCCChHHHHHHHHHHHHHHhh
Q 048150          108 KRLDNFLYEPEK------QGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       108 g~L~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++|.+++.....      ...+++..+..++.|++.||.|
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~  120 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY  120 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence            999999976311      2568999999999999999965

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.44  E-value=3e-12  Score=87.71  Aligned_cols=111  Identities=19%  Similarity=0.258  Sum_probs=93.8

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .....|...+.+|+|++|.|      ..+..+++|.+..... ....+..|+.++..++|+|++++++.+...+..++++
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            45566888899999999988      2467899999865433 4567888999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++++|.+++....  ..+++..+..++.+++.||.|.
T Consensus        95 e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~l  132 (286)
T cd06614          95 EYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYL  132 (286)
T ss_pred             eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999997632  3588999999999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.44  E-value=2e-12  Score=87.14  Aligned_cols=102  Identities=26%  Similarity=0.337  Sum_probs=84.9

Q ss_pred             eeecccCceeecC-------C--cEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVLPN-------E--HEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v~~-------~--~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|++|.|+.       +  ..+++|.+..... ...+.+..|+.++.+++|+|++++++.+.. +.+++++||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            3689999998832       2  2589999876544 446778899999999999999999999887 889999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++|.+.+.+... ..+++..+..++.|++.||.|
T Consensus        80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~  112 (257)
T cd05040          80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRY  112 (257)
T ss_pred             CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHH
Confidence            999999976432 458999999999999999975

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.44  E-value=3.8e-12  Score=87.34  Aligned_cols=111  Identities=19%  Similarity=0.203  Sum_probs=88.2

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--CceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLER--EEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~~~lv~  102 (146)
                      ++|...+.||.|++|.|      ..+..+++|.+..... .....+.+|+.++..++|+|++++++.+...  +.+++++
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            35778899999999988      3567799998864422 2356688999999999999999999988643  4689999


Q ss_pred             EecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++++|.+++... .....+++..+..++.|++.+|.|.
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~l  121 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL  121 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999998876431 1234578889999999999999863

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.44  E-value=1.6e-12  Score=90.47  Aligned_cols=102  Identities=21%  Similarity=0.196  Sum_probs=82.2

Q ss_pred             eeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|      ..|..+|+|.+....   .........|..++... .|++++++++.+...+.++++|||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            36899999998      356789999986431   12344566677777654 899999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+|..++..   ...+++..+..++.|++.||.|.
T Consensus        81 g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~l  112 (316)
T cd05620          81 GDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFL  112 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999998864   23478889999999999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.44  E-value=1e-13  Score=100.85  Aligned_cols=115  Identities=14%  Similarity=0.181  Sum_probs=90.1

Q ss_pred             HHHHHccCcccceeecccCceeecC------CcEEEEEEeccC----CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVLPN------EHEIAVKRLSRS----SSQGAQEINNEVVVVAKLQHINLVRLLGFCLER   95 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v~~------~~~~a~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~   95 (146)
                      +.....+-.+...+||+|+|.+|+.      |..||...++..    .+...+.+..|+.+|+.++|+||++++..|.+.
T Consensus        34 e~~p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~  113 (632)
T KOG0584|consen   34 EKDPTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT  113 (632)
T ss_pred             ccCCCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC
Confidence            3344445567889999999999944      445554444311    344568899999999999999999999999887


Q ss_pred             Cc--eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150           96 EE--KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        96 ~~--~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      ..  +.+++|.+..|+|..+...   ....+.+.+...++||++||.|.+
T Consensus       114 ~n~~in~iTEL~TSGtLr~Y~kk---~~~vn~kaik~W~RQILkGL~yLH  160 (632)
T KOG0584|consen  114 DNKTINFITELFTSGTLREYRKK---HRRVNIKAIKSWCRQILKGLVYLH  160 (632)
T ss_pred             CCceeeeeeecccCCcHHHHHHH---hccCCHHHHHHHHHHHHHHhhhhh
Confidence            65  8899999999999999865   334778899999999999996443

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.44  E-value=3.7e-12  Score=85.55  Aligned_cols=103  Identities=23%  Similarity=0.364  Sum_probs=84.4

Q ss_pred             eeecccCceeec-----CCcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCHH
Q 048150           38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLD  111 (146)
Q Consensus        38 ~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~  111 (146)
                      +.||+|+||.|+     .+..+++|.+...... ....+..|+.++..+.|+|++++++.+...+..++++||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            368999999883     4567899987644322 2346788999999999999999999999889999999999999999


Q ss_pred             HhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          112 NFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       112 ~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++...  ...+++..+..++.+++.+|.|.
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~~i~~~l~~l  109 (250)
T cd05085          81 SFLRKK--KDELKTKQLVKFALDAAAGMAYL  109 (250)
T ss_pred             HHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            988642  23478899999999999999764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.44  E-value=4.6e-12  Score=85.98  Aligned_cols=107  Identities=21%  Similarity=0.307  Sum_probs=86.6

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc-----ccHHHHHHHHHHHhhCCCCCeeeEeeEEEc--CCce
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-----QGAQEINNEVVVVAKLQHINLVRLLGFCLE--REEK   98 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~--~~~~   98 (146)
                      .+|...+.+|+|+||.|      ..+..+++|.+.....     .....+..|+.++..++|+|++++.+.+..  .+.+
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            36888999999999987      3567899998754321     123467889999999999999999998865  3568


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++||+++++|.+.+.+   ...+++.....++.|++.||.|
T Consensus        82 ~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~  121 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSY  121 (266)
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHH
Confidence            899999999999999864   2347888899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.44  E-value=2.4e-12  Score=86.61  Aligned_cols=106  Identities=31%  Similarity=0.454  Sum_probs=87.6

Q ss_pred             ccceeecccCceeec------C----CcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           35 STDNKLGEGGFGVLP------N----EHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        35 ~~~~~lg~g~fg~v~------~----~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      .+.+.||.|+||.|+      .    +..+++|.+...... ....+..|+.++..+.|++++++++.+...+..++++|
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            456889999999882      2    367999998654332 46678899999999999999999999999899999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+++++|.+++.... ...+++..+..++.|++.+|.|
T Consensus        82 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~  118 (258)
T smart00219       82 YMEGGDLLDYLRKNR-PKELSLSDLLSFALQIARGMEY  118 (258)
T ss_pred             ccCCCCHHHHHHhhh-hccCCHHHHHHHHHHHHHHHHH
Confidence            999999999986522 1128899999999999999965

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.44  E-value=1.3e-12  Score=88.02  Aligned_cols=101  Identities=23%  Similarity=0.369  Sum_probs=80.1

Q ss_pred             eeecccCceeecC------C----------cEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           38 NKLGEGGFGVLPN------E----------HEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        38 ~~lg~g~fg~v~~------~----------~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      +.||+|+||.|+.      +          ..+++|.+...... ...+.+|+.++..++|+|++++++.+.. +..+++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            3689999998831      1          13666766433222 5678899999999999999999999887 778999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+++|+|.+++.....  .+++..+..++.|++.||.|.
T Consensus        79 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~L  117 (259)
T cd05037          79 EEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYL  117 (259)
T ss_pred             EEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999975322  578889999999999999763

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.43  E-value=2.3e-12  Score=89.89  Aligned_cols=102  Identities=22%  Similarity=0.191  Sum_probs=80.2

Q ss_pred             eeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHH-HHhhCCCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVV-VVAKLQHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~-~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|      ..+..+|+|.+....   ......+..|.. ++..++|+|++++++.+...+..+++|||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36899999998      356789999986431   112334445544 57788999999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+|...+..   ...+++..+..++.|++.||.|.
T Consensus        81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~l  112 (321)
T cd05603          81 GELFFHLQR---ERCFLEPRARFYAAEVASAIGYL  112 (321)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999888854   23477888999999999999763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.43  E-value=3.6e-12  Score=87.56  Aligned_cols=120  Identities=21%  Similarity=0.266  Sum_probs=94.4

Q ss_pred             ccChhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEE
Q 048150           21 QFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCL   93 (146)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~   93 (146)
                      .++..++.....+|...+.||+|+||.|      ..+..+++|.+.... .....+..|+.++.++ .|+|++++++.+.
T Consensus        11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   89 (291)
T cd06639          11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY   89 (291)
T ss_pred             hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence            3455666667889999999999999988      356789999985432 2345567888888888 8999999999887


Q ss_pred             cC-----CceeEEEEecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhh
Q 048150           94 ER-----EEKILVYEYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        94 ~~-----~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ..     +..++++||+++++|.+++... .....+++..+..++.|++.||.|
T Consensus        90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~  143 (291)
T cd06639          90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQH  143 (291)
T ss_pred             eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence            54     3589999999999999988532 123457889999999999999975

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.43  E-value=4.6e-12  Score=85.70  Aligned_cols=101  Identities=23%  Similarity=0.393  Sum_probs=81.2

Q ss_pred             eecccCceeecC--------CcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCC
Q 048150           39 KLGEGGFGVLPN--------EHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKR  109 (146)
Q Consensus        39 ~lg~g~fg~v~~--------~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~  109 (146)
                      .||+|+||.|+.        +..+++|.+..... .....+.+|+.++..++|++++++++.+. .+..++++||+++|+
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            379999998842        34589998864422 22466889999999999999999999875 457899999999999


Q ss_pred             HHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          110 LDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       110 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |.+++...  ...+++..+..++.|++.||.|.
T Consensus        81 L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~l  111 (257)
T cd05115          81 LNKFLSGK--KDEITVSNVVELMHQVSMGMKYL  111 (257)
T ss_pred             HHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99998642  33588999999999999999763

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.43  E-value=2.4e-12  Score=87.93  Aligned_cols=112  Identities=21%  Similarity=0.296  Sum_probs=89.3

Q ss_pred             HccCcccceeecccCceeec-----C-----CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEc-CCc
Q 048150           30 ATNKFSTDNKLGEGGFGVLP-----N-----EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLE-REE   97 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~-----~-----~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~-~~~   97 (146)
                      ..++|...+.||+|+||.|+     .     +..+++|.+.... ......+..|+.++..++|+|++++++++.. +..
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            45678889999999999882     2     4668888875432 2235667889999999999999999998766 466


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCC-----CCCChHHHHHHHHHHHHHHhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQ-----GQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .+++++|+++|+|.+++......     ..+++..+..++.+++.||.|
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~  132 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSY  132 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence            88999999999999998653222     458899999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.43  E-value=1.9e-12  Score=89.68  Aligned_cols=110  Identities=23%  Similarity=0.301  Sum_probs=88.3

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      +...|...+.||+|+||.|      ..+..+++|.+.....   .....+.+|+.++..++|+|++++.+++...+..++
T Consensus        13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence            3456888899999999988      3567899998854322   224567899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||+++ ++.+++...  ...+++..+..++.|++.||.|.
T Consensus        93 v~e~~~g-~l~~~~~~~--~~~l~~~~~~~~~~ql~~~L~~L  131 (307)
T cd06607          93 VMEYCLG-SASDILEVH--KKPLQEVEIAAICHGALQGLAYL  131 (307)
T ss_pred             EHHhhCC-CHHHHHHHc--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            9999984 777766532  23488999999999999999653

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.43  E-value=1.8e-12  Score=88.79  Aligned_cols=112  Identities=20%  Similarity=0.264  Sum_probs=91.4

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCC-eeeEeeEEEcCC-----
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHIN-LVRLLGFCLERE-----   96 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~-i~~l~~~~~~~~-----   96 (146)
                      ...|...+.+|+|.||.|      ..|..||+|.+.....  .......+|+.++..++|+| ++.|++.+...+     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            345677788999999999      5677899999975533  23566789999999999999 999999998877     


Q ss_pred             -ceeEEEEecCCCCHHHhhcCCCCC-CCCChHHHHHHHHHHHHHHhhhc
Q 048150           97 -EKILVYEYVPNKRLDNFLYEPEKQ-GQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        97 -~~~lv~e~~~~g~L~~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                       .+++++||++. +|.+++...... ..++...+..++.|++.||.|.+
T Consensus        90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H  137 (323)
T KOG0594|consen   90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH  137 (323)
T ss_pred             ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence             78999999987 999999763321 35777899999999999997643

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.43  E-value=5.9e-12  Score=86.50  Aligned_cols=108  Identities=20%  Similarity=0.264  Sum_probs=87.1

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ..+|...+.||+|+||.|      ..+..+++|.+..... .....+.+|+.++..+.|+|++++.+++...+..++++|
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            467899999999999988      3467899999864422 223456789999999999999999999998889999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+. +++.+.+...  ...+++..+..++.|++.||.|
T Consensus        84 ~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~  118 (291)
T cd07870          84 YMH-TDLAQYMIQH--PGGLHPYNVRLFMFQLLRGLAY  118 (291)
T ss_pred             ccc-CCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHH
Confidence            996 5777766532  2346778888999999999975

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.43  E-value=2.2e-12  Score=91.63  Aligned_cols=106  Identities=16%  Similarity=0.237  Sum_probs=86.3

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC-----cee
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLERE-----EKI   99 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~-----~~~   99 (146)
                      +|...+.||+|+||.|      ..+..+|+|.+...  .......+.+|+.++..++|+|++++++++...+     .++
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            4678899999999998      35778999998543  2223466889999999999999999999988766     789


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+.+ +|.+.+..   ...+++..+..++.|++.||.|.
T Consensus        81 lv~e~~~~-~l~~~~~~---~~~l~~~~~~~~~~qi~~aL~~L  119 (372)
T cd07853          81 VVTELMQS-DLHKIIVS---PQPLSSDHVKVFLYQILRGLKYL  119 (372)
T ss_pred             EEeecccc-CHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999974 78887754   33588999999999999999763

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.43  E-value=3.6e-12  Score=86.23  Aligned_cols=99  Identities=20%  Similarity=0.249  Sum_probs=83.0

Q ss_pred             ecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCH
Q 048150           40 LGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL  110 (146)
Q Consensus        40 lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L  110 (146)
                      ||.|++|.|      ..+..+++|.+.....   .....+..|+.++..++|+|++++.+.+...+..++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            588999887      3477899999864422   2346688999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       111 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .+++.+.   ..+++..+..++.|++.||.|
T Consensus        81 ~~~l~~~---~~l~~~~~~~~~~~i~~~l~~  108 (262)
T cd05572          81 WTILRDR---GLFDEYTARFYIACVVLAFEY  108 (262)
T ss_pred             HHHHhhc---CCCCHHHHHHHHHHHHHHHHH
Confidence            9999652   347888999999999999964

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.42  E-value=4.6e-12  Score=86.09  Aligned_cols=110  Identities=18%  Similarity=0.267  Sum_probs=88.4

Q ss_pred             HccCcccceeecccCceeec------CCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcC------C
Q 048150           30 ATNKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLER------E   96 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~------~   96 (146)
                      +...|...+.||+|+||.|+      .+..+++|.+.... .....+..|+.++..+ +|+|++++.+.+...      +
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            45668888999999999983      45679999986432 3455678888888888 799999999988753      3


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ..++++||+++++|.+++... ....+++..+..++.|++.||.|
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~  126 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSH  126 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHH
Confidence            578999999999999998753 23457888999999999999975

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.42  E-value=4.8e-12  Score=85.92  Aligned_cols=109  Identities=19%  Similarity=0.348  Sum_probs=85.6

Q ss_pred             cccceeecccCceeecC---------CcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc-----
Q 048150           34 FSTDNKLGEGGFGVLPN---------EHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREE-----   97 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v~~---------~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~-----   97 (146)
                      |.+.+.||+|+||.|+.         +..+|+|.+.....  .....+..|+..+..++|++++++++.+.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            45678999999998831         25699999864322  224568899999999999999999998866543     


Q ss_pred             -eeEEEEecCCCCHHHhhcCCC---CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 -KILVYEYVPNKRLDNFLYEPE---KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 -~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       .++++||+++|+|..++....   ....+++.....++.|++.||.|.
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~l  129 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYL  129 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHH
Confidence             789999999999998885421   234588899999999999999753

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.42  E-value=2.6e-12  Score=94.54  Aligned_cols=116  Identities=13%  Similarity=0.145  Sum_probs=91.7

Q ss_pred             HHHHccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC--
Q 048150           27 IEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLERE--   96 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~--   96 (146)
                      ......+|.+.+.||+|+||.|      ..+..+|+|.+....  ......+..|+.++..+.|+++++++..+...+  
T Consensus        27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~  106 (496)
T PTZ00283         27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR  106 (496)
T ss_pred             ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence            3445678999999999999998      357789999986542  223456778999999999999999887765332  


Q ss_pred             ------ceeEEEEecCCCCHHHhhcCCC-CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 ------EKILVYEYVPNKRLDNFLYEPE-KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 ------~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                            .+++++||+++|+|.+++.... ....+++..+..++.|++.||.|.
T Consensus       107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~l  159 (496)
T PTZ00283        107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHV  159 (496)
T ss_pred             CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence                  3679999999999999886432 234588999999999999999763

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.42  E-value=3.9e-12  Score=86.49  Aligned_cols=103  Identities=22%  Similarity=0.323  Sum_probs=80.4

Q ss_pred             eecccCceeecCC--------cEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCC
Q 048150           39 KLGEGGFGVLPNE--------HEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKR  109 (146)
Q Consensus        39 ~lg~g~fg~v~~~--------~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~  109 (146)
                      .||+|+||.|+.+        ..+++|.+.... ......+.+|+.++..++|||++++++.+......++++||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            5899999998432        134566554332 2235678899999999999999999999999899999999999999


Q ss_pred             HHHhhcCCC-CCCCCChHHHHHHHHHHHHHHhh
Q 048150          110 LDNFLYEPE-KQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       110 L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |.+++.+.. .....++..+..++.|++.||.|
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~  114 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTH  114 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHH
Confidence            999997532 22346677788999999999976

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.42  E-value=7.2e-12  Score=84.15  Aligned_cols=109  Identities=17%  Similarity=0.257  Sum_probs=91.9

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|...+.||.|+||.|      ..+..+++|.+.....  .....+..|+.++..++|++++++.+.+...+..++++|+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            4778899999999988      3477899999865432  3456788999999999999999999999988999999999


Q ss_pred             cCCCCHHHhhcCCC-CCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPE-KQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++|.+.+.... ....+++..+..++.+++.||.|
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~  118 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKY  118 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHH
Confidence            99999999987532 13568999999999999999965

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.42  E-value=5.2e-12  Score=85.71  Aligned_cols=111  Identities=19%  Similarity=0.258  Sum_probs=89.9

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCC------
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLERE------   96 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~------   96 (146)
                      ...+|...+.||+|++|.|      ..+..+++|.+..... ....+..|+.++..+ .|+|++++++++...+      
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            4578999999999999988      3456799998864332 346688999999998 7999999999997654      


Q ss_pred             ceeEEEEecCCCCHHHhhcCCC-CCCCCChHHHHHHHHHHHHHHhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPE-KQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .+++++||+++++|.+++.... ....+++..+..++.|++.||.|
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~  128 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAY  128 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence            3899999999999999886422 23458899999999999999964

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.42  E-value=3.4e-12  Score=87.25  Aligned_cols=108  Identities=19%  Similarity=0.289  Sum_probs=88.4

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|+..+.||.|++|.|      ..+..+++|.+....  ......+..|+.++..++|+|++++++.+...+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            4778899999999988      356789999886432  22245688999999999999999999999988999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +. ++|.+++... ....+++..+..++.|++.||.|.
T Consensus        81 ~~-~~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~l  116 (284)
T cd07860          81 LH-QDLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFC  116 (284)
T ss_pred             cc-cCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            96 5888888642 234588999999999999999763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.42  E-value=9.4e-12  Score=83.53  Aligned_cols=106  Identities=23%  Similarity=0.316  Sum_probs=89.8

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--CceeEEE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLER--EEKILVY  102 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~~~lv~  102 (146)
                      +|...+.||+|++|.|      ..+..+++|.+.....  .....+..|+..+.++.|++++++.+.+...  ...++++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4677889999999988      2467899999865432  3466788999999999999999999999888  7899999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++++|.+++.+.   ..+++..+..++.+++.+|.|
T Consensus        81 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~l~~~l~~  116 (260)
T cd06606          81 EYVSGGSLSSLLKKF---GKLPEPVIRKYTRQILEGLAY  116 (260)
T ss_pred             EecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHH
Confidence            999999999998653   268899999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.42  E-value=5.9e-12  Score=86.00  Aligned_cols=110  Identities=18%  Similarity=0.229  Sum_probs=85.2

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHH-HhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVV-VAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~-l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ++|...+.||+|+||.|      ..|..+|+|.+..... .....+..|... ++...|+|++++++.+...+..++++|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            46888999999999998      3578899999865422 223345556554 556689999999999999999999999


Q ss_pred             ecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |++ |+|.+++... .....+++..+..++.|++.||.|.
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~l  119 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYL  119 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            997 5888877542 2334689999999999999999653

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.41  E-value=8.1e-12  Score=84.17  Aligned_cols=107  Identities=22%  Similarity=0.438  Sum_probs=89.0

Q ss_pred             cCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           32 NKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      .+|...+.||+|+||.|+     .+..+++|.+.... .....+..|+.++..+.|++++++++.+......++++||++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            467888999999999883     36678999875432 234568889999999999999999999988889999999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++|.+++...  ...+++..+..++.+++.++.|
T Consensus        83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~  115 (256)
T cd05112          83 HGCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAY  115 (256)
T ss_pred             CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHH
Confidence            99999998652  2347888899999999999975

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.41  E-value=6.4e-12  Score=85.65  Aligned_cols=105  Identities=17%  Similarity=0.289  Sum_probs=87.1

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccC-CcccHHHHHHHHHHHhhCC---CCCeeeEeeEEEcCCceeEEE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS-SSQGAQEINNEVVVVAKLQ---HINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~---h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .|...+.||+|+||.|      ..+..+++|.+... .......+.+|+.++..+.   |++++++++.+......++++
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            3667788999999988      35678999998643 2233566788888888886   999999999998888999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++++|.+++..    ..+++.....++.+++.||.|
T Consensus        82 e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~  116 (277)
T cd06917          82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKY  116 (277)
T ss_pred             ecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHH
Confidence            99999999998854    257899999999999999965

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.41  E-value=1.5e-13  Score=103.08  Aligned_cols=107  Identities=25%  Similarity=0.333  Sum_probs=89.3

Q ss_pred             cccceeecccCceeecCC----------cEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           34 FSTDNKLGEGGFGVLPNE----------HEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v~~~----------~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .+.+++||.|+||.|+.|          .+||+|++... ..+....+..|+-.|.++.|+|+++|.+++.... +.||+
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt  776 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT  776 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence            456889999999999444          26899988543 4445788999999999999999999999987655 88999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      +|++.|+|.++++.+..  .+..+..+.+.-||++||.|..
T Consensus       777 q~mP~G~LlDyvr~hr~--~igsq~lLnw~~QIAkgM~YLe  815 (1177)
T KOG1025|consen  777 QLMPLGCLLDYVREHRD--NIGSQDLLNWCYQIAKGMKYLE  815 (1177)
T ss_pred             HhcccchHHHHHHHhhc--cccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987543  3777889999999999998753

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.41  E-value=5.1e-12  Score=86.75  Aligned_cols=107  Identities=18%  Similarity=0.185  Sum_probs=87.5

Q ss_pred             CcccceeecccCceeec---------CCcEEEEEEeccCC----cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCce
Q 048150           33 KFSTDNKLGEGGFGVLP---------NEHEIAVKRLSRSS----SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEK   98 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v~---------~~~~~a~k~~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~   98 (146)
                      +|+..+.||+|+||.|+         .|..+++|++....    ......+..|+.++..+ +|++++++++++...+..
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            46778999999999872         56789999986432    12245677899999999 689999999999888889


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++++|.+++..   ...+++..+..++.|++.||.|.
T Consensus        81 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~l  121 (290)
T cd05613          81 HLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHL  121 (290)
T ss_pred             EEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999864   23478888999999999999653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.41  E-value=9.5e-12  Score=84.33  Aligned_cols=108  Identities=19%  Similarity=0.298  Sum_probs=87.3

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC-----cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--Cce
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-----SQGAQEINNEVVVVAKLQHINLVRLLGFCLER--EEK   98 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~~   98 (146)
                      .+|...+.||+|+||.|      ..+..+++|.+....     ......+.+|+.++..++|++++++++++...  ..+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            57889999999999988      356789999874321     12245678899999999999999999988654  458


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++++|.+.+.+   ...+++.....++.|++.+|.|.
T Consensus        82 ~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~L  122 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYL  122 (264)
T ss_pred             EEEEEeCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            899999999999998864   23478888999999999999753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.41  E-value=1.5e-11  Score=82.29  Aligned_cols=107  Identities=24%  Similarity=0.375  Sum_probs=91.4

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      +|...+.||+|++|.|      ..+..+++|.+..........+.+|+..+..+.|++++++.+.+...+..++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            4677889999999987      3467899999875544456778899999999999999999999999999999999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++|.+++....  ..+++..+..++.+++.+|.|
T Consensus        81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~  113 (253)
T cd05122          81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEY  113 (253)
T ss_pred             CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHH
Confidence            999999986532  458999999999999999975

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.41  E-value=7.4e-12  Score=85.48  Aligned_cols=101  Identities=21%  Similarity=0.252  Sum_probs=83.1

Q ss_pred             ecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCH
Q 048150           40 LGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL  110 (146)
Q Consensus        40 lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L  110 (146)
                      ||+|+||.|      ..|..+++|.+....   ......+..|+.++..++|++++++.+.+...+..++++||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            589999988      356789999986432   12244567899999999999999999999988999999999999999


Q ss_pred             HHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       111 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .+++.... ...+++..+..++.|++.+|.|
T Consensus        81 ~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~  110 (277)
T cd05577          81 KYHIYNVG-EPGFPEARAIFYAAQIICGLEH  110 (277)
T ss_pred             HHHHHHcC-cCCCCHHHHHHHHHHHHHHHHH
Confidence            99987532 2358899999999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.40  E-value=4.2e-12  Score=86.86  Aligned_cols=107  Identities=24%  Similarity=0.340  Sum_probs=82.8

Q ss_pred             cCcccceeecccCceeecC------Cc----EEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           32 NKFSTDNKLGEGGFGVLPN------EH----EIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~~------~~----~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      .+|+..+.||+|+||.|+.      +.    .+++|.+..... .....+..++..+..+.|+|++++++++. ....++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence            4677889999999999843      33    367777643211 12355677777888999999999999874 455788


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++||+++|+|.+++...  ...+++..+..++.|++.||.|
T Consensus        86 i~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~  124 (279)
T cd05111          86 VTQLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYY  124 (279)
T ss_pred             EEEeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999652  2347899999999999999986

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.40  E-value=5.5e-12  Score=85.73  Aligned_cols=109  Identities=18%  Similarity=0.236  Sum_probs=87.0

Q ss_pred             ccCcccceeecccCceeecCC---------cEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           31 TNKFSTDNKLGEGGFGVLPNE---------HEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~~---------~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ..+|...+.||+|+||.|+.+         ..+++|...... ......+..|+.++..+.|+|++++++.+.. +..++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l   83 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI   83 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence            356788899999999998321         257888875433 3345678899999999999999999998764 55789


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||+++|+|.+++...  ...+++..+..++.+++.||.|.
T Consensus        84 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~l  123 (270)
T cd05056          84 VMELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYL  123 (270)
T ss_pred             EEEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999653  23478999999999999999753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.40  E-value=4.2e-12  Score=95.64  Aligned_cols=122  Identities=16%  Similarity=0.279  Sum_probs=99.0

Q ss_pred             cccChhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEE
Q 048150           20 LQFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFC   92 (146)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~   92 (146)
                      ....++.+..++.-|.+.+++|.|.+|+|      ..+..+|+|++.... ..-...-.|..++... .|||++.+++++
T Consensus         7 ~~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~   85 (953)
T KOG0587|consen    7 MDIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAF   85 (953)
T ss_pred             cccchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEE
Confidence            34556666778888999999999999998      456678888876532 2345566788888877 799999999998


Q ss_pred             Ec-----CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150           93 LE-----REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        93 ~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      .-     ++.+|||||||.+|+..+++.+.. ...+.|..+.+|+..++.||.+.+
T Consensus        86 ~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH  140 (953)
T KOG0587|consen   86 IKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLH  140 (953)
T ss_pred             EEecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHh
Confidence            63     567999999999999999998754 667999999999999999997643

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.40  E-value=5.3e-12  Score=88.18  Aligned_cols=102  Identities=20%  Similarity=0.198  Sum_probs=79.2

Q ss_pred             eeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHH-HHhhCCCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVV-VVAKLQHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~-~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|      ..+..+|+|++....   ......+..+.. ++..+.|+||+++++.+...+..+++|||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            36899999998      355679999986421   112233444443 56778999999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+|.+.+..   ...+++..+..++.|++.||.|.
T Consensus        81 ~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~l  112 (325)
T cd05602          81 GELFYHLQR---ERCFLEPRARFYAAEIASALGYL  112 (325)
T ss_pred             CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999998864   23467788889999999999763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.40  E-value=2.8e-12  Score=88.52  Aligned_cols=106  Identities=21%  Similarity=0.282  Sum_probs=87.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      ..|.....||+|+||.|      ..+..+++|.+..........+.+|+.++..+.|+|++++++.+...+..++++||+
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~  100 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL  100 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecC
Confidence            33445567999999988      356789999986544444566788999999999999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++|.+++..    ..+++..+..++.|++.||.|
T Consensus       101 ~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~  132 (297)
T cd06659         101 QGGALTDIVSQ----TRLNEEQIATVCESVLQALCY  132 (297)
T ss_pred             CCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHH
Confidence            99999987743    347888999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.39  E-value=8.5e-12  Score=84.19  Aligned_cols=110  Identities=16%  Similarity=0.291  Sum_probs=87.7

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEc--CCceeEEE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLE--REEKILVY  102 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~--~~~~~lv~  102 (146)
                      +|...+.||.|+||.|      ..+..+++|.+....  ......+..|+.++..++|++++++++.+..  ...+++++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            4678899999999988      356789999886432  2234567889999999999999999987764  34588999


Q ss_pred             EecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++++|.+++... .....+++..+..++.+++.||.|.
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~l  121 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYEC  121 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999998653 1234588899999999999999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.39  E-value=8e-12  Score=85.41  Aligned_cols=118  Identities=18%  Similarity=0.267  Sum_probs=91.8

Q ss_pred             ChhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEc-
Q 048150           23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLE-   94 (146)
Q Consensus        23 ~~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~-   94 (146)
                      +..+...+...|...+.+|.|+||.|      ..+..+++|.+.... .....+..|+.++..+ .|+|++++++++.. 
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            34444456678899999999999988      346679999885432 2345677888888888 79999999998853 


Q ss_pred             -----CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           95 -----REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        95 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                           .+.++++|||+++|+|.+++... ....+++..+..++.|++.+|.|.
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~L  137 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNT-KGNALKEDWIAYICREILRGLAHL  137 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHH
Confidence                 35689999999999999998753 233478888999999999999753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.39  E-value=7.8e-13  Score=93.76  Aligned_cols=107  Identities=22%  Similarity=0.330  Sum_probs=85.9

Q ss_pred             ccCcccceeecccCceeec----CCcEEEEEEeccCCcccHHHHHHHHHHHh--hCCCCCeeeEeeEEEcCC----ceeE
Q 048150           31 TNKFSTDNKLGEGGFGVLP----NEHEIAVKRLSRSSSQGAQEINNEVVVVA--KLQHINLVRLLGFCLERE----EKIL  100 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~--~l~h~~i~~l~~~~~~~~----~~~l  100 (146)
                      .......+.+|+|.||.|+    .+..||||.++.   +..+.+..|-.+..  .+.|+||+.+++.-....    .++|
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL  285 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL  285 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhccCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence            4556778899999999994    556899999852   34566777766655  468999999988765444    6899


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccCC
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~  146 (146)
                      |++|.+.|+|.++|..    ...+|....+++.-+++||+  |||+
T Consensus       286 Vt~fh~kGsL~dyL~~----ntisw~~~cria~SmarGLa--~LHe  325 (534)
T KOG3653|consen  286 VTEFHPKGSLCDYLKA----NTISWNSLCRIAESMARGLA--HLHE  325 (534)
T ss_pred             EeeeccCCcHHHHHHh----ccccHHHHHHHHHHHHHHHH--Hhcc
Confidence            9999999999999964    34789999999999999996  5554

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.39  E-value=3.1e-13  Score=88.97  Aligned_cols=117  Identities=21%  Similarity=0.234  Sum_probs=97.9

Q ss_pred             HHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC----
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER----   95 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~----   95 (146)
                      .+.+..++|++.+.+|+|+|+.|      ..+..+|+|.+.....++....++|+...++.+|||++++.+.....    
T Consensus        15 tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~   94 (302)
T KOG2345|consen   15 TVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG   94 (302)
T ss_pred             cEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence            34556788999999999999988      56678999999876667788899999999999999999987766533    


Q ss_pred             -CceeEEEEecCCCCHHHhhcCCCC-CCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 -EEKILVYEYVPNKRLDNFLYEPEK-QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 -~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       ...|++++|...|+|.+.+..... ...+++.+++.++.++++||.+.
T Consensus        95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~l  143 (302)
T KOG2345|consen   95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEAL  143 (302)
T ss_pred             ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHH
Confidence             348999999999999999976433 34689999999999999999753

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.39  E-value=8.7e-12  Score=87.19  Aligned_cols=103  Identities=14%  Similarity=0.135  Sum_probs=83.6

Q ss_pred             eeeccc--Cceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEG--GFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g--~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      ..||+|  +|+.|      ..|..+|+|.+.....  ...+.+..|+.++..++|+|++++++.+...+..++++||+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            356666  77777      3678899999864322  2245678889899999999999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++.+++.+.. ...+++..+..++.|++.||.|
T Consensus        84 ~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~  116 (328)
T cd08226          84 GSANSLLKTYF-PEGMSEALIGNILFGALRGLNY  116 (328)
T ss_pred             CCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHH
Confidence            99999987532 3348889999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.39  E-value=1.3e-11  Score=83.17  Aligned_cols=108  Identities=14%  Similarity=0.158  Sum_probs=86.8

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEc-CCceeEEEE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLE-REEKILVYE  103 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~-~~~~~lv~e  103 (146)
                      +|.+.+.||+|++|.|      ..+..+++|.+....  ......+..|+.++..++|++++++.+.+.. .+.+++++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            4788899999999988      356789999986432  2234567889999999999999999988764 345789999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+++++|.+++... ....+++..+..++.+++.|+.+
T Consensus        81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~  117 (257)
T cd08223          81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQY  117 (257)
T ss_pred             ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999998752 23457899999999999999965

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.39  E-value=9.6e-12  Score=84.45  Aligned_cols=111  Identities=21%  Similarity=0.342  Sum_probs=86.3

Q ss_pred             CcccceeecccCceeec-------CCcEEEEEEeccCC----------cccHHHHHHHHHHHhh-CCCCCeeeEeeEEEc
Q 048150           33 KFSTDNKLGEGGFGVLP-------NEHEIAVKRLSRSS----------SQGAQEINNEVVVVAK-LQHINLVRLLGFCLE   94 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v~-------~~~~~a~k~~~~~~----------~~~~~~~~~e~~~l~~-l~h~~i~~l~~~~~~   94 (146)
                      +|...+.||+|+||.|+       .+..+++|.+....          ......+..|+.++.. ++|+|++++++.+..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            46778899999999882       35678999875321          1123456678877765 699999999999999


Q ss_pred             CCceeEEEEecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150           95 REEKILVYEYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        95 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      .+..++++||+++++|.+++... .....+++..+..++.|++.+|.|.+
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh  130 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLH  130 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999887531 22345888999999999999996543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.39  E-value=4e-12  Score=86.93  Aligned_cols=107  Identities=21%  Similarity=0.324  Sum_probs=87.0

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|...+.||+|+||.|      ..|..+++|.+.....  .....+..|+.++..++|+|++++++.+...+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            4778899999999988      3577899999864321  1234577899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++ +|.+.+...  ...+++..+..++.|+++||.|.
T Consensus        81 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~L  115 (284)
T cd07839          81 CDQ-DLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFC  115 (284)
T ss_pred             CCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            985 787777542  33489999999999999999763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.38  E-value=1.6e-11  Score=84.39  Aligned_cols=108  Identities=20%  Similarity=0.279  Sum_probs=86.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ++|...+.||+|.+|.|      ..+..+++|.+.....  .....+..|+.++..+.|+|++++++++...+..++++|
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            46888999999999988      3567899998854322  224567889999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+++ +|.+.+... ....+++..+..++.|++.||.|
T Consensus        82 ~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~  117 (294)
T PLN00009         82 YLDL-DLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAY  117 (294)
T ss_pred             cccc-cHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHH
Confidence            9975 788777542 23335778888999999999975

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.38  E-value=3.9e-12  Score=87.01  Aligned_cols=111  Identities=21%  Similarity=0.320  Sum_probs=88.2

Q ss_pred             cCcccceeecccCceeecC-----------CcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           32 NKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      .+|.+.+.||+|+||.|+.           +..+++|.+...... ....+..|+.++..++|++++++++.+......+
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~   84 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS   84 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence            3467788999999999833           256899998643222 2456788999999999999999999999888999


Q ss_pred             EEEEecCCCCHHHhhcCC-------------CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEP-------------EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++++|.+++...             .....+++..+..++.|++.||.|.
T Consensus        85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~l  140 (283)
T cd05091          85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFL  140 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence            999999999999998521             1123478888999999999999763

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.38  E-value=1.2e-12  Score=82.85  Aligned_cols=108  Identities=21%  Similarity=0.324  Sum_probs=89.6

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      .|...+.||+|.||.|      ..+..||+|.++...  ..-.....+|+.+++.+.|.||+.+++....++.+-+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            4667789999999999      345689999987543  22356788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      |.. +|..+..+  -+..++......++.|+.+||.+-+
T Consensus        83 cdq-dlkkyfds--lng~~d~~~~rsfmlqllrgl~fch  118 (292)
T KOG0662|consen   83 CDQ-DLKKYFDS--LNGDLDPEIVRSFMLQLLRGLGFCH  118 (292)
T ss_pred             hhH-HHHHHHHh--cCCcCCHHHHHHHHHHHHhhhhhhh
Confidence            987 88887754  3555888889999999999997644

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.38  E-value=7.9e-12  Score=85.54  Aligned_cols=107  Identities=23%  Similarity=0.283  Sum_probs=88.2

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|...+.||+|+||.|      ..+..+++|.+...  .......+..|+.++..+.|+|++++.+.+...+..++++||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            5788899999999988      24678999988643  222356788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++.+..+...   ...+++..+..++.+++.||.|.
T Consensus        82 ~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~L  116 (288)
T cd07833          82 VERTLLELLEAS---PGGLPPDAVRSYIWQLLQAIAYC  116 (288)
T ss_pred             CCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH
Confidence            998777666543   23478899999999999999764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.38  E-value=7.9e-12  Score=86.13  Aligned_cols=102  Identities=23%  Similarity=0.273  Sum_probs=85.5

Q ss_pred             ceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCH
Q 048150           37 DNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL  110 (146)
Q Consensus        37 ~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L  110 (146)
                      ...||+|+||.|      ..+..+++|.+..........+..|+.++..++|++++++++.+...+..++++||+++++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            467899999988      35678999988644433456688899999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       111 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+++..    ..+++..+..++.|++.+|.|.
T Consensus       105 ~~~~~~----~~~~~~~~~~~~~ql~~~l~~l  132 (292)
T cd06657         105 TDIVTH----TRMNEEQIAAVCLAVLKALSVL  132 (292)
T ss_pred             HHHHhc----CCCCHHHHHHHHHHHHHHHHHH
Confidence            998743    2478888999999999999763

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.38  E-value=2.3e-11  Score=83.44  Aligned_cols=108  Identities=22%  Similarity=0.291  Sum_probs=81.5

Q ss_pred             CcccceeecccCceeec-------CCcEEEEEEeccCCc--ccHHHHHHHHHHHhhC---CCCCeeeEeeEEEc-----C
Q 048150           33 KFSTDNKLGEGGFGVLP-------NEHEIAVKRLSRSSS--QGAQEINNEVVVVAKL---QHINLVRLLGFCLE-----R   95 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v~-------~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l---~h~~i~~l~~~~~~-----~   95 (146)
                      +|...+.||+|+||.|+       .+..+|+|.+.....  .......+|+.++..+   .|||++++++++..     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            68889999999999982       346789998864322  2234556677776655   69999999998752     3


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..+++++||++ ++|.+++... ....+++..+..++.|++.||.|.
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~l  126 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFL  126 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            45899999997 5898888652 233478899999999999999763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.38  E-value=1.9e-11  Score=83.92  Aligned_cols=105  Identities=22%  Similarity=0.294  Sum_probs=88.0

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      .+...+.||+|++|.|      ..+..+++|.+..........+.+|+.++..+.|++++++++.+...+..++++||++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~   99 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE   99 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence            4555679999999988      3456799998864443345667889999999999999999999999999999999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++|.+++..    ..+++..+..++.|++.+|.|
T Consensus       100 ~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~  130 (285)
T cd06648         100 GGALTDIVTH----TRMNEEQIATVCLAVLKALSF  130 (285)
T ss_pred             CCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHH
Confidence            9999999864    347888899999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.38  E-value=3.2e-12  Score=87.00  Aligned_cols=108  Identities=21%  Similarity=0.301  Sum_probs=90.5

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCC-CCCeeeEeeEEEcCCceeEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQ-HINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ++|...+.||+|+||.|      ..+..+++|++....   ......+..|+.++..+. |+|++++++.+...+..+++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            46888999999999988      367789999986421   222456778889999998 99999999999888999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||++++++|.+++.+   ...+++..+..++.|++.||.|.
T Consensus        81 ~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~L  118 (280)
T cd05581          81 LEYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYL  118 (280)
T ss_pred             EcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999965   23589999999999999999763

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.38  E-value=1.1e-11  Score=85.27  Aligned_cols=109  Identities=19%  Similarity=0.264  Sum_probs=88.1

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--CceeEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ--GAQEINNEVVVVAKLQHINLVRLLGFCLER--EEKILV  101 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~~~lv  101 (146)
                      ++|...+.||.|+||.|      ..+..+++|.+......  ....+.+|+.++..++|+|++++.+++...  +.++++
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            56888899999999988      34678999998644222  233567899999999999999999998877  789999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      +||+++ +|.+++...  ...+++..+..++.|++.||.|.+
T Consensus        85 ~e~~~~-~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH  123 (293)
T cd07843          85 MEYVEH-DLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHLH  123 (293)
T ss_pred             ehhcCc-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999985 898888652  235889999999999999997643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.37  E-value=1.3e-11  Score=83.24  Aligned_cols=100  Identities=31%  Similarity=0.440  Sum_probs=81.5

Q ss_pred             eeecccCceeecC---------CcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVLPN---------EHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v~~---------~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|+.         +..+++|.+..... .....+..|+.++..+.|++++++++.+. .+..++++||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            3689999998832         25789999864432 23456889999999999999999998765 5568999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+|.+++.+.   ..+++..+..++.|++.+|.|
T Consensus        80 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~  110 (257)
T cd05060          80 GPLLKYLKKR---REIPVSDLKELAHQVAMGMAY  110 (257)
T ss_pred             CcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHH
Confidence            9999999653   258899999999999999975

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.37  E-value=1.1e-11  Score=84.18  Aligned_cols=108  Identities=20%  Similarity=0.373  Sum_probs=82.9

Q ss_pred             ccceeecccCceeecCC------c--EEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC------Cce
Q 048150           35 STDNKLGEGGFGVLPNE------H--EIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLER------EEK   98 (146)
Q Consensus        35 ~~~~~lg~g~fg~v~~~------~--~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~------~~~   98 (146)
                      .+.+.||+|+||.|+.+      .  .+++|.+....  ......+..|+.++..++|+|++++++.+...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            46788999999999432      2  58888876432  22356688899999999999999999877432      347


Q ss_pred             eEEEEecCCCCHHHhhcCC---CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEP---EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++|+|.+++...   .....+++.....++.|++.||.|.
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l  128 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYL  128 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHH
Confidence            8999999999999887432   1233478999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.37  E-value=1.2e-11  Score=84.54  Aligned_cols=108  Identities=23%  Similarity=0.349  Sum_probs=86.6

Q ss_pred             ccCcccceeecccCceeec------CCc----EEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           31 TNKFSTDNKLGEGGFGVLP------NEH----EIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~------~~~----~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ..+|...+.||+|+||.|+      .+.    .+|+|.+.... ......+..|+.++..+.|+|++.+.+.+.. ...+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~   84 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ   84 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence            4578888999999999983      233    47899886432 2235567889999999999999999998864 4577


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++|+++|+|.+++...  ...+++..+..++.|++.||.|
T Consensus        85 l~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~  124 (279)
T cd05109          85 LVTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSY  124 (279)
T ss_pred             EEEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999998652  3358889999999999999986

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.37  E-value=1.5e-13  Score=96.43  Aligned_cols=111  Identities=15%  Similarity=0.208  Sum_probs=93.5

Q ss_pred             ccCcccceeecccCceeec------CCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           31 TNKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ...|...+.||+|+||.|+      .+..||+|.+..... .....++.|+.++.++.++++.++++.+..+..+|++||
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe   91 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME   91 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence            3557778999999999994      445799999975533 346788999999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhcc
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL  144 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~  144 (146)
                      ||.+|++.+++..   ...+++..+.-+++++..||.|.|.
T Consensus        92 y~~gGsv~~lL~~---~~~~~E~~i~~ilre~l~~l~ylH~  129 (467)
T KOG0201|consen   92 YCGGGSVLDLLKS---GNILDEFEIAVILREVLKGLDYLHS  129 (467)
T ss_pred             HhcCcchhhhhcc---CCCCccceeeeehHHHHHHhhhhhh
Confidence            9999999999964   3335888899999999999976553

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=8.8e-12  Score=87.24  Aligned_cols=100  Identities=19%  Similarity=0.190  Sum_probs=78.3

Q ss_pred             ecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhC---CCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           40 LGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKL---QHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        40 lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l---~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      ||+|+||.|      ..+..+|+|++....   .........|..++...   .||+++++.+.+...+.++++|||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            689999998      346789999985321   11223344555555544   699999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+|.+.+..   ...+++..+..++.|++.||.|.
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~L  112 (330)
T cd05586          81 GELFWHLQK---EGRFSEDRAKFYIAELVLALEHL  112 (330)
T ss_pred             ChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999988864   33578899999999999999763

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.37  E-value=1.9e-11  Score=82.18  Aligned_cols=102  Identities=23%  Similarity=0.416  Sum_probs=84.8

Q ss_pred             eeecccCceee-----cCCcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCHH
Q 048150           38 NKLGEGGFGVL-----PNEHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLD  111 (146)
Q Consensus        38 ~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~  111 (146)
                      +.||+|+||.|     ..+..+++|.+...... ....+..|+.++..+.|++++++++.+......++++||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            36899999988     23788999988654332 4567889999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          112 NFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       112 ~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++...  ...+++..+..++.+++.+|.|
T Consensus        81 ~~l~~~--~~~~~~~~~~~~~~~~~~~l~~  108 (251)
T cd05041          81 TFLRKK--KNRLTVKKLLQMSLDAAAGMEY  108 (251)
T ss_pred             HHHHhc--CCCCCHHHHHHHHHHHHHHHHH
Confidence            998653  2347888899999999999975

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.37  E-value=7.1e-12  Score=86.94  Aligned_cols=106  Identities=14%  Similarity=0.094  Sum_probs=85.1

Q ss_pred             cceeecccCceee----cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCC
Q 048150           36 TDNKLGEGGFGVL----PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKR  109 (146)
Q Consensus        36 ~~~~lg~g~fg~v----~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~  109 (146)
                      +.+.+|.|+++.+    ..+..+|+|.+...  .......+..|+.++..++|+|++++++++...+..++++||+++|+
T Consensus         6 i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~   85 (314)
T cd08216           6 IGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS   85 (314)
T ss_pred             hhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence            3444555566655    46788999998654  23345678899999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          110 LDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       110 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |.+++... ....+++..+..++.|++.||.|.
T Consensus        86 l~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~L  117 (314)
T cd08216          86 CEDLLKTH-FPEGLPELAIAFILKDVLNALDYI  117 (314)
T ss_pred             HHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHH
Confidence            99999753 233578889999999999999763

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.37  E-value=4.6e-12  Score=85.97  Aligned_cols=103  Identities=25%  Similarity=0.416  Sum_probs=82.9

Q ss_pred             eecccCceeecCC------------cEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           39 KLGEGGFGVLPNE------------HEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        39 ~lg~g~fg~v~~~------------~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      .||+|+||.|+.+            ..+++|.+.... ......+.+|+.++..++|++++++++.+...+..++++||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            5899999988432            357778765432 234567889999999999999999999999888999999999


Q ss_pred             CCCCHHHhhcCCC----CCCCCChHHHHHHHHHHHHHHhh
Q 048150          106 PNKRLDNFLYEPE----KQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       106 ~~g~L~~~l~~~~----~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++|.+++.+..    ....+++..+..++.|++.||.|
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  121 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVY  121 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHH
Confidence            9999999986421    22347888999999999999975

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.37  E-value=1.9e-11  Score=84.75  Aligned_cols=109  Identities=19%  Similarity=0.277  Sum_probs=87.0

Q ss_pred             CcccceeecccCceee------c--CCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--Ccee
Q 048150           33 KFSTDNKLGEGGFGVL------P--NEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLER--EEKI   99 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~--~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~~~   99 (146)
                      .|...+.||+|+||.|      .  .+..+|+|.+....   ......+..|+.++..++|+|++++++.+...  ..++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            3677889999999988      2  56789999987532   33356678899999999999999999999887  7799


Q ss_pred             EEEEecCCCCHHHhhcCCC--CCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPE--KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++ ++.+++....  ....+++..+..++.|++.||.|.
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l  124 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYL  124 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHH
Confidence            99999986 6777664322  123578899999999999999763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.37  E-value=1.9e-13  Score=96.05  Aligned_cols=114  Identities=21%  Similarity=0.180  Sum_probs=90.2

Q ss_pred             HHHccCcccceeecccCceee----cCC--cEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCc
Q 048150           28 EDATNKFSTDNKLGEGGFGVL----PNE--HEIAVKRLSRSS---SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREE   97 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v----~~~--~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~   97 (146)
                      .+...+|..+.+||+|+||+|    +.|  ..+|+|+++..-   ..+..--+.|-++|+.. +-|.+++++.+|.+.+.
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR  424 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR  424 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence            566788999999999999999    333  468999986541   12233445666777766 56789999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccCC
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~  146 (146)
                      +++||||+.||+|.-.|++   -..+.+..+..++.+|+-||-  |||+
T Consensus       425 LyFVMEyvnGGDLMyhiQQ---~GkFKEp~AvFYAaEiaigLF--FLh~  468 (683)
T KOG0696|consen  425 LYFVMEYVNGGDLMYHIQQ---VGKFKEPVAVFYAAEIAIGLF--FLHS  468 (683)
T ss_pred             eeeEEEEecCchhhhHHHH---hcccCCchhhhhhHHHHHHhh--hhhc
Confidence            9999999999999888865   445888899999999999996  5554

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.37  E-value=3.8e-12  Score=85.62  Aligned_cols=109  Identities=21%  Similarity=0.321  Sum_probs=89.3

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +|...+.+|+|+|+.|      ..+..+++|.+....  ......+..|+.++..++|++++++++.+......++++||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            4778899999999987      356789999986432  22345677899999999999999999999988999999999


Q ss_pred             cCCCCHHHhhcCCC-CCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPE-KQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++|.+++.+.. ....+++..+..++.+++.||.|
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~  118 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQA  118 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999886421 23457888999999999999975

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.36  E-value=4.2e-13  Score=97.91  Aligned_cols=108  Identities=27%  Similarity=0.336  Sum_probs=89.2

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCccc---HHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQG---AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      -|.-...||-|+||.|      .+...||+|.+.-++.+.   .+.+++|++.+..+.|||.+.+.+|+......|||||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            3555678999999998      566789999987554443   5668999999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      ||-| +..+++.-+..  ++.+-.+..|+.+.+.||+|.+
T Consensus       107 YClG-SAsDlleVhkK--plqEvEIAAi~~gaL~gLaYLH  143 (948)
T KOG0577|consen  107 YCLG-SASDLLEVHKK--PLQEVEIAAITHGALQGLAYLH  143 (948)
T ss_pred             HHhc-cHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHH
Confidence            9976 77887754333  4778889999999999998654

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.36  E-value=1.8e-11  Score=84.17  Aligned_cols=110  Identities=19%  Similarity=0.275  Sum_probs=86.7

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCc-----
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREE-----   97 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~-----   97 (146)
                      ++|+..+.||+|+||.|      ..+..+++|.+....  ......+.+|+.++..+ +|+|++++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            36888999999999988      356789999876432  12345678899999999 46999999998877665     


Q ss_pred             eeEEEEecCCCCHHHhhcCCCC--CCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEK--QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++||+++ +|.+++.....  ...+++..+..++.|++.||.|.
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~L  126 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHC  126 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            8999999986 78888754221  34578999999999999999764

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.36  E-value=2.3e-11  Score=82.75  Aligned_cols=104  Identities=26%  Similarity=0.459  Sum_probs=82.0

Q ss_pred             eeecccCceeecC------Cc--EEEEEEeccCC-cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVLPN------EH--EIAVKRLSRSS-SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v~~------~~--~~a~k~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|+.      +.  .+++|.+.... ......+..|+.++..+ .|+|++++++.+...+.+++++||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            3589999998832      22  46778775332 22346788899999999 899999999999998899999999999


Q ss_pred             CCHHHhhcCCC-------------CCCCCChHHHHHHHHHHHHHHhh
Q 048150          108 KRLDNFLYEPE-------------KQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       108 g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+|.+++....             ....+++..+..++.|++.||.|
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~  127 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDY  127 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHH
Confidence            99999986422             11247888999999999999976

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.36  E-value=2.8e-12  Score=88.12  Aligned_cols=111  Identities=18%  Similarity=0.304  Sum_probs=90.3

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEecc--CCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc-----CC
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSR--SSSQGAQEINNEVVVVAKLQHINLVRLLGFCLE-----RE   96 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~-----~~   96 (146)
                      ....|...+.||+|+||.|      ..|..||+|.+..  ......++-.+|+.+++.++|+||+.+.+.+..     -+
T Consensus        20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~   99 (359)
T KOG0660|consen   20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN   99 (359)
T ss_pred             ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence            3455666789999999988      6778999999862  233346788999999999999999999988876     34


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccCC
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~  146 (146)
                      .+++|+|+|+. +|.+.++.   +..++......++-|+++||.  |+||
T Consensus       100 DvYiV~elMet-DL~~iik~---~~~L~d~H~q~f~YQiLrgLK--yiHS  143 (359)
T KOG0660|consen  100 DVYLVFELMET-DLHQIIKS---QQDLTDDHAQYFLYQILRGLK--YIHS  143 (359)
T ss_pred             eeEEehhHHhh-HHHHHHHc---CccccHHHHHHHHHHHHHhcc--hhhc
Confidence            59999999966 99999965   334888999999999999997  5554

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.35  E-value=2.6e-11  Score=85.85  Aligned_cols=104  Identities=12%  Similarity=0.091  Sum_probs=84.7

Q ss_pred             HccCcccceeecccCceeec------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ...+|.+.+.||+|+||.|+      .+..+++|.....      ....|+.++..++|+|++++++++...+..++++|
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence            34579999999999999982      3457888875322      23468889999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++. ++|.+++..  ....+++..+..++.|++.||.|.
T Consensus       138 ~~~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~L  173 (357)
T PHA03209        138 HYS-SDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYL  173 (357)
T ss_pred             ccC-CcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHH
Confidence            986 588888764  234588999999999999999764

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.35  E-value=2.2e-11  Score=83.96  Aligned_cols=109  Identities=18%  Similarity=0.278  Sum_probs=87.4

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC-----
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLERE-----   96 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~-----   96 (146)
                      ...+|.+.+.+|+|+||.|      ..+..+++|.+....  ......+..|+.++..++|+|++++++.+....     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            4567889999999999988      356789999986432  223456678999999999999999999887654     


Q ss_pred             -----ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           97 -----EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        97 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                           .+++++||+++ ++...+...  ...+++..+..++.|++.||.|
T Consensus        85 ~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~  131 (302)
T cd07864          85 KKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNY  131 (302)
T ss_pred             cccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHH
Confidence                 68999999986 777776542  3358899999999999999976

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.35  E-value=1.2e-11  Score=89.91  Aligned_cols=108  Identities=19%  Similarity=0.302  Sum_probs=82.6

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--------
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER--------   95 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--------   95 (146)
                      ...+|...+.||+|+||.|      ..+..+|+|.+...    .....+|+.++..++|+|++++.+++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            3467999999999999998      35678999987532    22345799999999999999998876432        


Q ss_pred             CceeEEEEecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..++++|||+++ ++.+++... .....+++..+..++.|++.||.|.
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yL  186 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYI  186 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            246789999986 677766431 2344588999999999999999763

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.35  E-value=7.4e-12  Score=84.48  Aligned_cols=99  Identities=18%  Similarity=0.239  Sum_probs=83.0

Q ss_pred             ecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCH
Q 048150           40 LGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL  110 (146)
Q Consensus        40 lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L  110 (146)
                      ||.|+||.|      ..|..+++|.+.....   .....+..|+.++..+.|+|++++++.+......++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            578999987      3478899999864422   2355678899999999999999999999888899999999999999


Q ss_pred             HHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       111 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .+++.+.   ..+++..+..++.|++.||.|
T Consensus        81 ~~~l~~~---~~~~~~~~~~i~~qi~~~L~~  108 (265)
T cd05579          81 ASLLENV---GSLDEDVARIYIAEIVLALEY  108 (265)
T ss_pred             HHHHHHc---CCCCHHHHHHHHHHHHHHHHH
Confidence            9998652   258899999999999999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.35  E-value=1.6e-11  Score=89.54  Aligned_cols=101  Identities=15%  Similarity=0.081  Sum_probs=83.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      ..|.+...||+|+||.|      ..+..+++|...      ...+.+|+.++..++|+||+++++++...+..+++++++
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~  242 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY  242 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence            46899999999999998      345678888532      223568999999999999999999999888999999998


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      . ++|..++...  ...+++..+..++.|++.||.|
T Consensus       243 ~-~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~y  275 (461)
T PHA03211        243 R-SDLYTYLGAR--LRPLGLAQVTAVARQLLSAIDY  275 (461)
T ss_pred             C-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHH
Confidence            6 6888887642  2358999999999999999976

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.35  E-value=2.8e-11  Score=84.25  Aligned_cols=108  Identities=22%  Similarity=0.309  Sum_probs=87.0

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ..|...+.||+|+||.|      ..+..+++|.+.....   .....+..|+.++..++|+|++++++++...+..++++
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  104 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM  104 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence            34778889999999988      3567899999864322   22456788999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++ ++.+.+...  ...+++..+..++.+++.||.|.
T Consensus       105 e~~~g-~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~l  141 (317)
T cd06635         105 EYCLG-SASDLLEVH--KKPLQEVEIAAITHGALQGLAYL  141 (317)
T ss_pred             eCCCC-CHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99975 777776542  33488999999999999999653

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.35  E-value=9.9e-12  Score=89.94  Aligned_cols=105  Identities=21%  Similarity=0.267  Sum_probs=86.2

Q ss_pred             cceeecccCceee------cCCcEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           36 TDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ--GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        36 ~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      .+++||+|.||.|      ..|..||+|++.+....  ....+..|+.++..+.||.|+.+--.|++++.+++|||-+.|
T Consensus       568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G  647 (888)
T KOG4236|consen  568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG  647 (888)
T ss_pred             hHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence            4689999999999      46678999999754322  245678999999999999999999999999999999999987


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      -.|+-.+.+..  ..+++.....++.||+.+|.|.
T Consensus       648 DMLEMILSsEk--gRL~er~TkFlvtQIL~ALr~L  680 (888)
T KOG4236|consen  648 DMLEMILSSEK--GRLPERITKFLVTQILVALRYL  680 (888)
T ss_pred             hHHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHh
Confidence            55555554432  3489999999999999999874

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.35  E-value=1.4e-11  Score=84.54  Aligned_cols=107  Identities=21%  Similarity=0.208  Sum_probs=87.1

Q ss_pred             CcccceeecccCceeec---------CCcEEEEEEeccCC----cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCce
Q 048150           33 KFSTDNKLGEGGFGVLP---------NEHEIAVKRLSRSS----SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEK   98 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v~---------~~~~~a~k~~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~   98 (146)
                      +|...+.||+|++|.|+         .+..+++|.+....    ......+..|+.++..+ +|++++++.+.+......
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            46778999999999883         35679999886432    12245677899999999 699999999999888899


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++|+|.+.+..   ...+++..+..++.|++.+|.|.
T Consensus        81 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~l  121 (288)
T cd05583          81 HLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHL  121 (288)
T ss_pred             EEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHH
Confidence            999999999999998864   23478888999999999999763

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.34  E-value=3.1e-11  Score=84.99  Aligned_cols=108  Identities=16%  Similarity=0.260  Sum_probs=86.5

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC-----
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLERE-----   96 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~-----   96 (146)
                      ...+|...+.||+|+||.|      ..+..+++|.+....  ......+..|+.++..+.|+|++++.+++....     
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            4577999999999999988      356789999985432  122456778999999999999999999887554     


Q ss_pred             -ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 -EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       ..+++++|+ +++|.+++.+    ..+++..+..++.|++.||.|.
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~L  134 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYI  134 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH
Confidence             358999998 6689888753    3478899999999999999763

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.34  E-value=2.7e-11  Score=85.72  Aligned_cols=107  Identities=21%  Similarity=0.268  Sum_probs=84.9

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC-----
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLERE-----   96 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~-----   96 (146)
                      ...+|...+.||+|+||.|      ..|..+|+|.+....  ......+.+|+.++..++|+|++++++++....     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            4578999999999999998      356789999986432  223556778999999999999999999886543     


Q ss_pred             -ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 -EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       ..++++||+++ ++.+.+..     .+++..+..++.|++.||.|.
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~L  139 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHL  139 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHH
Confidence             47899999986 56666532     367888999999999999763

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.34  E-value=2.9e-11  Score=81.68  Aligned_cols=99  Identities=25%  Similarity=0.379  Sum_probs=80.3

Q ss_pred             eecccCceeec--------CCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCC
Q 048150           39 KLGEGGFGVLP--------NEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNK  108 (146)
Q Consensus        39 ~lg~g~fg~v~--------~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g  108 (146)
                      .||+|+||.|+        .+..+++|.+....  ......+..|+.++..+.|+|++++++.+. .+..++++||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            58999999884        34678999886432  223567889999999999999999998874 45678999999999


Q ss_pred             CHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          109 RLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       109 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +|.+++..   ...+++.....++.|++.||.|
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~  110 (257)
T cd05116          81 PLNKFLQK---NKHVTEKNITELVHQVSMGMKY  110 (257)
T ss_pred             cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHH
Confidence            99999864   2347889999999999999975

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.34  E-value=2.5e-11  Score=84.11  Aligned_cols=110  Identities=20%  Similarity=0.314  Sum_probs=88.0

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--Cce
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ--GAQEINNEVVVVAKLQHINLVRLLGFCLER--EEK   98 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~~   98 (146)
                      ...++|...+.||+|+||.|      ..|..+++|.+......  ....+.+|+.++..++|++++++.+++...  +.+
T Consensus         4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (309)
T cd07845           4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI   83 (309)
T ss_pred             ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence            35678999999999999988      35778999998643221  233456799999999999999999998754  458


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++||+.+ +|.+++...  ...+++..+..++.|++.||.|
T Consensus        84 ~lv~e~~~~-~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~  123 (309)
T cd07845          84 FLVMEYCEQ-DLASLLDNM--PTPFSESQVKCLMLQLLRGLQY  123 (309)
T ss_pred             EEEEecCCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHH
Confidence            999999975 788887642  2458899999999999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.34  E-value=4e-11  Score=81.90  Aligned_cols=105  Identities=20%  Similarity=0.309  Sum_probs=86.6

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--CceeEEEE
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLER--EEKILVYE  103 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~~~lv~e  103 (146)
                      |...+.||.|++|.|      ..+..+++|.+....  ......+..|+.++..+.|++++++++.+...  +..++++|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            456788999999988      245789999987542  23355678899999999999999999999887  78999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+++ +|.+++...  ...+++..+..++.|++.||.|
T Consensus        81 ~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~  115 (287)
T cd07840          81 YMDH-DLTGLLDSP--EVKFTESQIKCYMKQLLEGLQY  115 (287)
T ss_pred             cccc-cHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHH
Confidence            9985 888888652  2458899999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.33  E-value=3.6e-11  Score=82.02  Aligned_cols=106  Identities=18%  Similarity=0.230  Sum_probs=83.1

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcC--CceeEEEE
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKL-QHINLVRLLGFCLER--EEKILVYE  103 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~--~~~~lv~e  103 (146)
                      |++.+.+|+|+||.|      ..+..+++|.+..... ........|+..+.++ .|+|++++++.+...  +.+++++|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            567789999999988      3567899998864322 2233445788888888 599999999999887  78999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++ ++.+.+.+.  ...+++..+..++.|++.||.|.
T Consensus        81 ~~~~-~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~L  116 (282)
T cd07831          81 LMDM-NLYELIKGR--KRPLPEKRVKSYMYQLLKSLDHM  116 (282)
T ss_pred             cCCc-cHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9975 888877642  23588999999999999999764

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.33  E-value=4.2e-11  Score=82.75  Aligned_cols=110  Identities=20%  Similarity=0.301  Sum_probs=86.4

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc----
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREE----   97 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~----   97 (146)
                      ..++|...+.||+|+||.|      ..+..+++|.+.....  .....+..|+.++..++|++++++++.+...+.    
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR   89 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence            4457999999999999988      3567899998864322  123455689999999999999999998876543    


Q ss_pred             ----eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 ----KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                          .++++||+.+ +|.+.+...  ...+++..+..++.|++.||.|.
T Consensus        90 ~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~al~~l  135 (310)
T cd07865          90 YKGSFYLVFEFCEH-DLAGLLSNK--NVKFTLSEIKKVMKMLLNGLYYI  135 (310)
T ss_pred             CCceEEEEEcCCCc-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHH
Confidence                4999999975 788877542  23578999999999999999763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.33  E-value=3.2e-11  Score=82.45  Aligned_cols=106  Identities=20%  Similarity=0.304  Sum_probs=86.8

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      |...+.||.|++|.|      ..|..+++|.+....  ......+..|+.++..++|++++++++.+...+..++++||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            466788999999988      357789999986432  222456788999999999999999999999899999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      + ++|.+++.... ...+++..+..++.|++.+|.|
T Consensus        81 ~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~  114 (283)
T cd07835          81 D-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAY  114 (283)
T ss_pred             C-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHH
Confidence            6 58998886422 2358899999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.33  E-value=3.3e-11  Score=81.48  Aligned_cols=103  Identities=21%  Similarity=0.336  Sum_probs=79.5

Q ss_pred             eeecccCceeecC---------CcEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc-CCceeEEEEecC
Q 048150           38 NKLGEGGFGVLPN---------EHEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLE-REEKILVYEYVP  106 (146)
Q Consensus        38 ~~lg~g~fg~v~~---------~~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~-~~~~~lv~e~~~  106 (146)
                      +.||+|+||.|+.         ...+++|.+... .......+..|+.++..++|+|++++++.+.. .+..++++||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            3689999998842         235889987532 22335677889999999999999999997764 445789999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|+|.+++...  ....++..+..++.|++.||.|.
T Consensus        81 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~l  114 (262)
T cd05058          81 HGDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYL  114 (262)
T ss_pred             CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999652  23356777889999999999753

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.33  E-value=5.7e-11  Score=80.85  Aligned_cols=106  Identities=18%  Similarity=0.233  Sum_probs=79.5

Q ss_pred             HHHccCcccceee--cccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCce
Q 048150           28 EDATNKFSTDNKL--GEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEK   98 (146)
Q Consensus        28 ~~~~~~~~~~~~l--g~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~   98 (146)
                      ....++|...+.+  |+|+||.|      ..+..+++|.+........     |+.....+ .|++++++++.+...+..
T Consensus        10 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~   84 (267)
T PHA03390         10 VQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGH   84 (267)
T ss_pred             HHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCee
Confidence            3334555555555  99999988      4567789998754322111     22222222 699999999999999999


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++||+++++|.+++...   ..+++..+..++.|++.||.|
T Consensus        85 ~iv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~  124 (267)
T PHA03390         85 VLIMDYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALND  124 (267)
T ss_pred             EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999652   268999999999999999975

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.32  E-value=1.6e-11  Score=84.88  Aligned_cols=107  Identities=23%  Similarity=0.381  Sum_probs=84.0

Q ss_pred             cCcccceeecccCceeecC------Cc----EEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           32 NKFSTDNKLGEGGFGVLPN------EH----EIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~~------~~----~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      .+|+..+.||+|+||.|+.      +.    .+++|.+..... .....+..|+.++..+.|+|++++++.+... ...+
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            5677888999999999833      32    468887754322 2234678899999999999999999988654 4678


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++|+++|+|.+++...  ...+++..+..++.|++.||.|
T Consensus        86 v~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~  124 (303)
T cd05110          86 VTQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMY  124 (303)
T ss_pred             eehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999998653  2347888999999999999975

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.32  E-value=1.8e-13  Score=90.30  Aligned_cols=109  Identities=23%  Similarity=0.300  Sum_probs=90.6

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ..+.|.+-++||+|.|+.|      ..|...++|.+...  ...+.+.+.+|+++-..++||||+.|++........++|
T Consensus         9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv   88 (355)
T KOG0033|consen    9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   88 (355)
T ss_pred             cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence            3456778889999999988      56777777776533  233567889999999999999999999999888999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +|+++|++|..-|-.   ....++..+...+.||+++|.|
T Consensus        89 Fe~m~G~dl~~eIV~---R~~ySEa~aSH~~rQiLeal~y  125 (355)
T KOG0033|consen   89 FDLVTGGELFEDIVA---REFYSEADASHCIQQILEALAY  125 (355)
T ss_pred             EecccchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999887654   2457888899999999999987

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.32  E-value=2.2e-11  Score=87.20  Aligned_cols=102  Identities=12%  Similarity=0.129  Sum_probs=84.1

Q ss_pred             ccCcccceeecccCceeec--------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           31 TNKFSTDNKLGEGGFGVLP--------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~--------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ..+|.+.+.||+|+||.|+        .+..+++|.+...     ....+|+.++..++|+|++++++.+...+..++++
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            4569999999999999983        2346888877432     23458999999999999999999999889999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |++. ++|.+++..   ...+++..+..++.|++.||.|
T Consensus       166 e~~~-~~l~~~l~~---~~~l~~~~~~~i~~ql~~aL~~  200 (392)
T PHA03207        166 PKYK-CDLFTYVDR---SGPLPLEQAITIQRRLLEALAY  200 (392)
T ss_pred             hhcC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHH
Confidence            9986 588888832   3458899999999999999976

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.32  E-value=3e-13  Score=99.38  Aligned_cols=113  Identities=18%  Similarity=0.276  Sum_probs=98.5

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++..+|....++|.|.+|.|      ..+...|+|.++..........+.|+-++...+|+||+.+++.+...+.+|+.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            56788999999999999998      456778999998766666778889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccCC
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~  146 (146)
                      |||.+|+|.+...   ....+++.++..+++...+||.  |+||
T Consensus        92 EycgggslQdiy~---~TgplselqiayvcRetl~gl~--ylhs  130 (829)
T KOG0576|consen   92 EYCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLK--YLHS  130 (829)
T ss_pred             EecCCCcccceee---ecccchhHHHHHHHhhhhccch--hhhc
Confidence            9999999988653   4566899999999999999995  5554

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.32  E-value=1.3e-12  Score=89.92  Aligned_cols=109  Identities=25%  Similarity=0.293  Sum_probs=83.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--C---ceeE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER--E---EKIL  100 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~---~~~l  100 (146)
                      -.|...+++|.|+||.|      ..+..+|+|..-...    .--.+|+.+|..+.||||+.|.-+|...  .   .+.+
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl   99 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL   99 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence            34777899999999998      456789999975432    1234889999999999999998777642  2   3678


Q ss_pred             EEEecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhhhccC
Q 048150          101 VYEYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSRNFLF  145 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~~~~~  145 (146)
                      |+||++. +|.+.++.. ..+..++.-.+.-+.-||.+||.|.+.|
T Consensus       100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~  144 (364)
T KOG0658|consen  100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH  144 (364)
T ss_pred             HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc
Confidence            9999998 899998742 2245578888999999999999765543

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.31  E-value=4.7e-11  Score=83.63  Aligned_cols=109  Identities=18%  Similarity=0.251  Sum_probs=86.9

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEc-CCce
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLE-REEK   98 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~-~~~~   98 (146)
                      ...+.+|...+.||+|+||.|      ..+..+++|.+....  ......+..|+.++..+.|||++++.+++.. .+..
T Consensus         6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   85 (328)
T cd07856           6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI   85 (328)
T ss_pred             eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence            346678999999999999988      367789999875432  2235667789999999999999999998876 4578


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++||+. ++|.+++..    ..++...+..++.|++.||.|
T Consensus        86 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~  123 (328)
T cd07856          86 YFVTELLG-TDLHRLLTS----RPLEKQFIQYFLYQILRGLKY  123 (328)
T ss_pred             EEEeehhc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHH
Confidence            89999985 588888753    236777888999999999975

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.31  E-value=5.8e-11  Score=80.22  Aligned_cols=101  Identities=15%  Similarity=0.185  Sum_probs=78.1

Q ss_pred             eeecccCceee------cCCcEEEEEEeccCCccc---HHHHHHHHHHH-hhCCCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVL------PNEHEIAVKRLSRSSSQG---AQEINNEVVVV-AKLQHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~---~~~~~~e~~~l-~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|      ..+..+++|.+.......   ...+..|..++ ....|+|++++++.+...+.+++++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            46899999988      356789999986432111   22334444443 445899999999999998999999999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++|.+++..   ...+++..+..++.|++.||.|
T Consensus        82 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~  112 (260)
T cd05611          82 GDCASLIKT---LGGLPEDWAKQYIAEVVLGVED  112 (260)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHH
Confidence            999999864   2347888999999999999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.30  E-value=1.3e-11  Score=83.39  Aligned_cols=109  Identities=21%  Similarity=0.266  Sum_probs=83.9

Q ss_pred             CcccceeecccCceeec------CCcEEEEEEeccC-----CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           33 KFSTDNKLGEGGFGVLP------NEHEIAVKRLSRS-----SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      +|.+.+.||+|+||.|+      .+...++|.++..     ..........|+.++..++|||++++++.+......+++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            46778999999999983      2233445554321     112234566788899999999999999999888899999


Q ss_pred             EEecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +||+++++|.+++... .....+++..+..++.|++.||.|
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  121 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHY  121 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHH
Confidence            9999999999888642 223458999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.30  E-value=5.6e-11  Score=83.29  Aligned_cols=107  Identities=16%  Similarity=0.199  Sum_probs=85.0

Q ss_pred             cCcc-cceeecccCceee------cCCcEEEEEEeccCCccc--------------HHHHHHHHHHHhhCCCCCeeeEee
Q 048150           32 NKFS-TDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQG--------------AQEINNEVVVVAKLQHINLVRLLG   90 (146)
Q Consensus        32 ~~~~-~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~--------------~~~~~~e~~~l~~l~h~~i~~l~~   90 (146)
                      .+|. +.+.||.|+||.|      ..+..+++|.+.......              ...+..|+.++..+.|+|++++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            4454 4577999999988      356789999885432111              124678999999999999999999


Q ss_pred             EEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           91 FCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        91 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++...+..++++||+. |+|.+++..   ...+++.....++.|++.||.|.
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~L  135 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVDR---KIRLTESQVKCILLQILNGLNVL  135 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999997 589988854   33478889999999999999763

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.30  E-value=3e-11  Score=84.94  Aligned_cols=108  Identities=20%  Similarity=0.265  Sum_probs=85.1

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC------
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLER------   95 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~------   95 (146)
                      ..++|...+.||+|+||.|      ..+..+|+|.+.....  .....+.+|+.++..++|+|++++++++...      
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            4477999999999999998      3556899999864322  2245577899999999999999998877533      


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ...+++++++ +++|.+++..    ..+++..+..++.|++.||.|.
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~L  134 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYI  134 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH
Confidence            3468889877 6789887743    3488999999999999999764

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.29  E-value=2.7e-11  Score=84.88  Aligned_cols=108  Identities=12%  Similarity=0.220  Sum_probs=86.9

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEc----CCce
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLE----REEK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~----~~~~   98 (146)
                      .++|...+.||.|+||.|      ..+..+++|.+....  ......+..|+.++..++|++++++++.+..    ...+
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            377889999999999988      457789999986432  2235667789999999999999999887753    3468


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+. ++|.+++..   ...+++..+..++.|++.||.|.
T Consensus        84 ~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~L  123 (334)
T cd07855          84 YVVMDLME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYI  123 (334)
T ss_pred             EEEEehhh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999996 589888854   33488999999999999999764

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.29  E-value=3.6e-11  Score=84.62  Aligned_cols=106  Identities=20%  Similarity=0.284  Sum_probs=87.0

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC---------
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER---------   95 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~---------   95 (146)
                      ..+|...+.||.|+||.|      ..+..+++|.+..........+..|+.++..++|+|++++++++...         
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            467899999999999988      35678999998765555567788999999999999999998766543         


Q ss_pred             -----CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           96 -----EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        96 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                           ..+++++||++ ++|.+++..    ..+++..+..++.|++.||.|
T Consensus        84 ~~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~  129 (342)
T cd07854          84 SLTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKY  129 (342)
T ss_pred             cccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHH
Confidence                 34789999997 488887743    247889999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.29  E-value=9e-11  Score=80.42  Aligned_cols=108  Identities=20%  Similarity=0.322  Sum_probs=81.2

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCcc--cHHHHHHHHHHHhhC---CCCCeeeEeeEEEcC-----C
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ--GAQEINNEVVVVAKL---QHINLVRLLGFCLER-----E   96 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~--~~~~~~~e~~~l~~l---~h~~i~~l~~~~~~~-----~   96 (146)
                      +|...+.||+|+||.|      ..+..+++|.+......  .......|+.++..+   .|+|++++++++...     .
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            4778899999999998      35678999998643211  233455666666654   799999999987642     3


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+++++||+++ +|.+++... ....+++..+..++.|++.||.|.
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~l  124 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKV-PPPGLPAETIKDLMRQFLRGLDFL  124 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            47899999985 888888642 233488999999999999999763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.28  E-value=1.2e-10  Score=79.26  Aligned_cols=108  Identities=20%  Similarity=0.344  Sum_probs=82.9

Q ss_pred             cccceeecccCceeec---------CCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC------
Q 048150           34 FSTDNKLGEGGFGVLP---------NEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLERE------   96 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v~---------~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~------   96 (146)
                      |...+.||+|+||.|+         .+..+++|.+....  ......+.+|+.++..+.|++++++++.+....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            4567889999999883         24679999986432  223556788999999999999999999876432      


Q ss_pred             ceeEEEEecCCCCHHHhhcCC---CCCCCCChHHHHHHHHHHHHHHhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEP---EKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .++++++|+++|+|..++...   .....+++.....++.|++.||.|
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~  128 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEY  128 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            247889999999998877431   122347888899999999999975

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.28  E-value=7.4e-11  Score=83.65  Aligned_cols=107  Identities=20%  Similarity=0.285  Sum_probs=84.8

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC------
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLER------   95 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~------   95 (146)
                      ...+|...+.||+|+||.|      ..+..+|+|.+....  ......+.+|+.++..++|+|++++++.+...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            4578999999999999998      356789999986432  22346678899999999999999999887543      


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..++++|||+++ +|.+.+..     .+++..+..++.|++.||.|.
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~L  142 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHL  142 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHH
Confidence            347999999976 67776642     367888999999999999763

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.28  E-value=2.3e-11  Score=85.00  Aligned_cols=105  Identities=18%  Similarity=0.268  Sum_probs=86.7

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC-----cee
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLERE-----EKI   99 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~-----~~~   99 (146)
                      +|.+.+.||.|++|.|      ..+..+++|.+....  ....+.+..|+.++..++|++++++.+.+...+     .++
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            4778899999999988      346789999986542  334567889999999999999999999887765     789


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++|+++ +|.+++.+   ...+++..+..++.+++.||.|
T Consensus        81 lv~e~~~~-~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~  118 (330)
T cd07834          81 IVTELMET-DLHKVIKS---PQPLTDDHIQYFLYQILRGLKY  118 (330)
T ss_pred             EEecchhh-hHHHHHhC---CCCCCHHHHHHHHHHHHHHHHH
Confidence            99999985 88888864   2368899999999999999965

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.27  E-value=1.5e-10  Score=80.48  Aligned_cols=106  Identities=25%  Similarity=0.316  Sum_probs=84.8

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      |...+.||+|+||.|      ..+..+++|.+.....   .....+..|+.++..++|++++++++++...+..++++||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            555678999999988      3566899999864322   2235677899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +.+ ++.+++...  ...+++..+..++.|++.+|.|.
T Consensus       103 ~~~-~l~~~l~~~--~~~l~~~~~~~~~~qi~~al~~L  137 (313)
T cd06633         103 CLG-SASDLLEVH--KKPLQEVEIAAITHGALQGLAYL  137 (313)
T ss_pred             CCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            964 777777542  33478889999999999999763

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.27  E-value=7.3e-11  Score=83.39  Aligned_cols=108  Identities=19%  Similarity=0.288  Sum_probs=85.0

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC-----
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLER-----   95 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~-----   95 (146)
                      ...++|...+.||+|+||.|      ..+..+|+|.+....  ......+.+|+.++..++|+|++++++.+...     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            34578999999999999998      356789999986432  22345677899999999999999999988643     


Q ss_pred             -CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 -EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       ...+++|||+++ ++.+.+..     .+++..+..++.|++.||.|.
T Consensus        94 ~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~L  135 (355)
T cd07874          94 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHL  135 (355)
T ss_pred             cceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHH
Confidence             247899999986 66666632     377888999999999999763

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.27  E-value=1.7e-10  Score=79.01  Aligned_cols=101  Identities=15%  Similarity=0.121  Sum_probs=76.7

Q ss_pred             eecccCceee------cCCcEEEEEEeccCCcc--c-HHHHHHHHH---HHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           39 KLGEGGFGVL------PNEHEIAVKRLSRSSSQ--G-AQEINNEVV---VVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        39 ~lg~g~fg~v------~~~~~~a~k~~~~~~~~--~-~~~~~~e~~---~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      .||+|+||.|      ..+..+++|.+......  . ......+..   ++....|++++.+.+.+...+..+++|||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4799999998      34678999988643221  1 222333333   3334478999999999998899999999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        81 ~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~l  113 (279)
T cd05633          81 GGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHM  113 (279)
T ss_pred             CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999988864   23489999999999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.26  E-value=8.9e-12  Score=91.79  Aligned_cols=111  Identities=18%  Similarity=0.286  Sum_probs=88.5

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      +-|...+.||-|+||+|      .....+|+|.+++.+.   .....+..|-.+|....++++++|+-.|.+.+.+|+||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            44888999999999988      3344578887764422   22345667888999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh----hccC
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR----NFLF  145 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~----~~~~  145 (146)
                      +|++||++..+|.+   -.-+++..+..++.++..++.+    +|||
T Consensus       709 dYIPGGDmMSLLIr---mgIFeE~LARFYIAEltcAiesVHkmGFIH  752 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLIR---MGIFEEDLARFYIAELTCAIESVHKMGFIH  752 (1034)
T ss_pred             eccCCccHHHHHHH---hccCHHHHHHHHHHHHHHHHHHHHhcccee
Confidence            99999999998864   3457888888888888877765    6777

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.26  E-value=4.7e-11  Score=80.06  Aligned_cols=99  Identities=22%  Similarity=0.271  Sum_probs=82.8

Q ss_pred             ecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCH
Q 048150           40 LGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL  110 (146)
Q Consensus        40 lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L  110 (146)
                      ||+|+||.|      ..+..+++|.+.....   .....+..|+.++..+.|++++++++.+...+.+++++|++++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            588999987      3477899999865422   2345678899999999999999999999989999999999999999


Q ss_pred             HHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       111 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .+++...   ..+++..+..++.|++++|.|
T Consensus        81 ~~~l~~~---~~l~~~~~~~~~~qi~~~l~~  108 (250)
T cd05123          81 FSHLSKE---GRFSEERARFYAAEIVLALEY  108 (250)
T ss_pred             HHHHHhc---CCCCHHHHHHHHHHHHHHHHH
Confidence            9998642   347899999999999999975

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.26  E-value=7.9e-11  Score=82.69  Aligned_cols=107  Identities=15%  Similarity=0.293  Sum_probs=85.8

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC-----Cc
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLER-----EE   97 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~-----~~   97 (146)
                      ...|...+.||+|+||.|      ..+..+++|.+...  .......+..|+.++..++|+|++++.+++...     ..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            457889999999999988      35678999998643  222345677899999999999999999877644     34


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .++++||+. ++|.+++..   ...+++..+..++.|++.||.|
T Consensus        84 ~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~  123 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRS---SQTLSDDHCQYFLYQLLRGLKY  123 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHH
Confidence            799999997 588888854   3458899999999999999975

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.25  E-value=5.4e-11  Score=81.28  Aligned_cols=107  Identities=22%  Similarity=0.281  Sum_probs=84.9

Q ss_pred             cccceeecccCceeec------CCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCC-CCCeeeEeeEEEcCCceeEEEEec
Q 048150           34 FSTDNKLGEGGFGVLP------NEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQ-HINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      |.+.+.||+|++|.|+      .+..+++|.+..... .......+|+..+..+. |++++++++.+...+..++++||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            5667889999999982      456799998854321 12234456888899998 999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       +|+|.+.+.... ...+++..+..++.|++.+|.|.
T Consensus        81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~L  115 (283)
T cd07830          81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHI  115 (283)
T ss_pred             -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHH
Confidence             779998886532 23578999999999999999764

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.25  E-value=2.2e-10  Score=78.34  Aligned_cols=101  Identities=15%  Similarity=0.095  Sum_probs=77.1

Q ss_pred             eecccCceeec------CCcEEEEEEeccCCccc---HHHHHHHH---HHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           39 KLGEGGFGVLP------NEHEIAVKRLSRSSSQG---AQEINNEV---VVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        39 ~lg~g~fg~v~------~~~~~a~k~~~~~~~~~---~~~~~~e~---~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      .||+|+||.|+      .+..+|+|.+.......   ......+.   ..+....|++++.+.+.+...+..++++||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            47999999983      46789999986532211   11233333   33444579999999999999999999999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|+|..++..   ...+++..+..++.|++.||.|.
T Consensus        81 g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~l  113 (278)
T cd05606          81 GGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHM  113 (278)
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999988854   33589999999999999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.25  E-value=1.9e-10  Score=81.09  Aligned_cols=113  Identities=20%  Similarity=0.257  Sum_probs=87.1

Q ss_pred             hHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC-
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLER-   95 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~-   95 (146)
                      .++....++|...+.||+|+||.|      ..+..+|+|.+....  ......+.+|+.++..++|+|++++.+++... 
T Consensus        10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~   89 (345)
T cd07877          10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR   89 (345)
T ss_pred             HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence            344556688999999999999988      356789999986432  11245677899999999999999999887643 


Q ss_pred             -----CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 -----EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                           +..+++++++ +++|.+++..    ..+++..+..++.|++.||.|.
T Consensus        90 ~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~L  136 (345)
T cd07877          90 SLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYI  136 (345)
T ss_pred             cccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH
Confidence                 3367777765 6789887753    2478889999999999999763

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.24  E-value=8.6e-11  Score=82.44  Aligned_cols=108  Identities=21%  Similarity=0.353  Sum_probs=85.4

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcC--Cce
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLER--EEK   98 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~--~~~   98 (146)
                      ...+|...+.||+|+||.|      ..+..+++|.+...  .......+.+|+.++..+ +|+|++++++++...  ..+
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            3467888899999999988      24678999987532  222345677899999999 999999999988654  358


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++ +|.+.+...    .+++.....++.|++.||.|.
T Consensus        85 ~lv~e~~~~-~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~L  123 (337)
T cd07852          85 YLVFEYMET-DLHAVIRAN----ILEDVHKRYIMYQLLKALKYI  123 (337)
T ss_pred             EEEeccccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHH
Confidence            999999984 898888542    578888999999999999753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.24  E-value=1.8e-10  Score=80.09  Aligned_cols=102  Identities=17%  Similarity=0.233  Sum_probs=78.9

Q ss_pred             ceeecccCceeec--------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc--CCceeEEEEecC
Q 048150           37 DNKLGEGGFGVLP--------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLE--REEKILVYEYVP  106 (146)
Q Consensus        37 ~~~lg~g~fg~v~--------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~--~~~~~lv~e~~~  106 (146)
                      ...||+|+||.|+        .+..+++|.+...  .......+|+.++..++|+|++++++.+..  ....++++||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            4579999999982        3457899988643  234456789999999999999999998864  345889999987


Q ss_pred             CCCHHHhhcCCC------CCCCCChHHHHHHHHHHHHHHhh
Q 048150          107 NKRLDNFLYEPE------KQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       107 ~g~L~~~l~~~~------~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      + +|.+++....      ....+++..+..++.|++.||.|
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~  123 (317)
T cd07868          84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY  123 (317)
T ss_pred             C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHH
Confidence            5 7877765311      22347888999999999999976

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.24  E-value=6e-11  Score=89.26  Aligned_cols=116  Identities=24%  Similarity=0.332  Sum_probs=94.8

Q ss_pred             HHHHHccCcccceeecccCceeecC-------------CcEEEEEEeccC-CcccHHHHHHHHHHHhhC-CCCCeeeEee
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVLPN-------------EHEIAVKRLSRS-SSQGAQEINNEVVVVAKL-QHINLVRLLG   90 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v~~-------------~~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~l~~   90 (146)
                      .|+...++..+.+.+|+|.||.|..             ...||+|.++.. .....+.+..|+.+|..+ .|+|++.+.|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            4666666667777999999998821             346899998643 223467899999999998 6999999999


Q ss_pred             EEEcCCceeEEEEecCCCCHHHhhcCCC------C-----C--CCCChHHHHHHHHHHHHHHhh
Q 048150           91 FCLEREEKILVYEYVPNKRLDNFLYEPE------K-----Q--GQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        91 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~------~-----~--~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +|...+.++++.||+..|+|..+++...      .     .  ..++....+.++.||+.||.|
T Consensus       370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~  433 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEY  433 (609)
T ss_pred             eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHH
Confidence            9999889999999999999999998643      0     0  137889999999999999987

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.24  E-value=3.4e-10  Score=78.59  Aligned_cols=103  Identities=19%  Similarity=0.233  Sum_probs=78.6

Q ss_pred             ceeecccCceeec--------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc--CCceeEEEEecC
Q 048150           37 DNKLGEGGFGVLP--------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLE--REEKILVYEYVP  106 (146)
Q Consensus        37 ~~~lg~g~fg~v~--------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~--~~~~~lv~e~~~  106 (146)
                      ...||+|+||.|+        .+..+|+|.+...  .....+.+|+.++..++|+|++++.+++..  ....++++||++
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            3579999999982        2357899987543  234457789999999999999999998854  456889999987


Q ss_pred             CCCHHHhhcCC------CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          107 NKRLDNFLYEP------EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       107 ~g~L~~~l~~~------~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      + +|.+++...      .....+++..+..++.|++.||.|.
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l  124 (317)
T cd07867          84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL  124 (317)
T ss_pred             C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence            6 777776421      1223478888999999999999763

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.24  E-value=1.5e-10  Score=80.28  Aligned_cols=108  Identities=25%  Similarity=0.317  Sum_probs=85.4

Q ss_pred             cCcccceeecccCceeec------CCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ..|...+.||+|+||.|+      .+..+++|.+....   ......+..|+.++..++|++++++.+++...+..++++
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            346667889999999883      45678999885321   122456778999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+. |++.+.+...  ...+++..+..++.+++.||.|.
T Consensus        95 e~~~-~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~L  131 (308)
T cd06634          95 EYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYL  131 (308)
T ss_pred             EccC-CCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            9997 5787776532  23478889999999999999763

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.24  E-value=2.4e-10  Score=80.71  Aligned_cols=106  Identities=20%  Similarity=0.310  Sum_probs=85.2

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC------
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLER------   95 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~------   95 (146)
                      ...+|...+.||+|+||.|      ..+..+++|.+...  .......+.+|+.++..++|+|++++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            4578999999999999988      46778999998543  222345677899999999999999999987643      


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ...++++||+.+ +|.+.+..     .++...+..++.|++.||.|
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~  133 (353)
T cd07850          94 QDVYLVMELMDA-NLCQVIQM-----DLDHERMSYLLYQMLCGIKH  133 (353)
T ss_pred             CcEEEEEeccCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHH
Confidence            347999999975 88887743     17888899999999999976

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.23  E-value=1.6e-10  Score=81.04  Aligned_cols=107  Identities=16%  Similarity=0.262  Sum_probs=85.3

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC-----Cce
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLER-----EEK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~-----~~~   98 (146)
                      +++|.+.+.||+|+||.|      ..|..+++|.+... .......+..|+.++..++|+|++++++.+...     ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            468999999999999988      35678999998642 222345678899999999999999998876543     347


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+.+ ++.+.+..    ..+++..+..++.|++.||.|.
T Consensus        84 ~lv~e~~~~-~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~L  122 (336)
T cd07849          84 YIVQELMET-DLYKLIKT----QHLSNDHIQYFLYQILRGLKYI  122 (336)
T ss_pred             EEEehhccc-CHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH
Confidence            899999975 88877743    3488889999999999999753

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.23  E-value=1.6e-11  Score=87.30  Aligned_cols=112  Identities=19%  Similarity=0.210  Sum_probs=90.4

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccCC-------cccHHHHHHHHHHHhhCCCCCeeeEeeEEEc
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-------SQGAQEINNEVVVVAKLQHINLVRLLGFCLE   94 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~   94 (146)
                      .-...+|-.+..||+|+|+.|      .....||+|+-...+       ....+...+|.++.+.+.||-|+++++++.-
T Consensus       459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl  538 (775)
T KOG1151|consen  459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL  538 (775)
T ss_pred             cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence            334466888999999999998      445678888854221       1224556789999999999999999999864


Q ss_pred             -CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           95 -REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        95 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       .+.+|-|+|||+|.+|..++.+   +..++++.+..|+.||+.+|.|.
T Consensus       539 DtdsFCTVLEYceGNDLDFYLKQ---hklmSEKEARSIiMQiVnAL~YL  584 (775)
T KOG1151|consen  539 DTDSFCTVLEYCEGNDLDFYLKQ---HKLMSEKEARSIIMQIVNALKYL  584 (775)
T ss_pred             ccccceeeeeecCCCchhHHHHh---hhhhhHHHHHHHHHHHHHHHHHH
Confidence             5678999999999999998865   44589999999999999999984

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.22  E-value=1.4e-10  Score=79.19  Aligned_cols=106  Identities=19%  Similarity=0.274  Sum_probs=86.7

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ--GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      |...+.||.|++|.|      ..+..+++|.+......  ....+..|+.++..++|++++++++.+...+..++++||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            456788999999987      35678999988654322  3456778999999999999999999999899999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++ ++.+.+...  ...+++..+..++.+++.||.|.
T Consensus        81 ~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~L  114 (283)
T cd05118          81 DT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFC  114 (283)
T ss_pred             CC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHH
Confidence            86 888888653  24588999999999999999753

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.22  E-value=2.4e-11  Score=88.53  Aligned_cols=111  Identities=22%  Similarity=0.298  Sum_probs=88.9

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC--------cccHHHHHHHHHHHhhCC---CCCeeeEeeEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--------SQGAQEINNEVVVVAKLQ---HINLVRLLGFC   92 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--------~~~~~~~~~e~~~l~~l~---h~~i~~l~~~~   92 (146)
                      ..++|.....+|+|+||+|      .+...|.+|.+.+++        ......+-.|+.+|..+.   |+||+++.++|
T Consensus       559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF  638 (772)
T KOG1152|consen  559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF  638 (772)
T ss_pred             ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence            3467899999999999999      455678999986432        112345668999999886   99999999999


Q ss_pred             EcCCceeEEEEec-CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccC
Q 048150           93 LEREEKILVYEYV-PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLF  145 (146)
Q Consensus        93 ~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~  145 (146)
                      ++++..+|+||-- ++-+|.++|..   .+.+++..+..|.+|++.|..  ++|
T Consensus       639 Eddd~yyl~te~hg~gIDLFd~IE~---kp~m~E~eAk~IFkQV~agi~--hlh  687 (772)
T KOG1152|consen  639 EDDDYYYLETEVHGEGIDLFDFIEF---KPRMDEPEAKLIFKQVVAGIK--HLH  687 (772)
T ss_pred             ecCCeeEEEecCCCCCcchhhhhhc---cCccchHHHHHHHHHHHhccc--ccc
Confidence            9999999999953 56788999853   556899999999999999885  444

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.22  E-value=8e-11  Score=80.29  Aligned_cols=105  Identities=24%  Similarity=0.346  Sum_probs=86.9

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      |...+.||+|.+|.|      ..+..+++|.+....  ......+..|+.++..+.|++++++++.+...+..++++||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            456678999999988      347789999987542  223566788999999999999999999999889999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++ +|.+++.+..  ..+++..+..++.+++.||.|
T Consensus        81 ~~-~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~  113 (282)
T cd07829          81 DM-DLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAY  113 (282)
T ss_pred             Cc-CHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHH
Confidence            84 8999997532  358899999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>PTZ00284 protein kinase; Provisional

Probab=99.21  E-value=3.3e-10  Score=82.94  Aligned_cols=110  Identities=18%  Similarity=0.269  Sum_probs=80.3

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCC------CCeeeEeeEEEcC
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQH------INLVRLLGFCLER   95 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~l~~~~~~~   95 (146)
                      .....+|.+.+.||+|+||.|      ..+..+|+|++... .........|+.++..+.|      .+++.+.+++...
T Consensus       125 ~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~  203 (467)
T PTZ00284        125 DVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV-PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE  203 (467)
T ss_pred             ccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc-hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence            334578999999999999998      34567999998532 1223344556666665544      4578888877654


Q ss_pred             -CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 -EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       .+.+++++++ +++|.+++..   ...+++..+..++.|++.||.|.
T Consensus       204 ~~~~~iv~~~~-g~~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~yL  247 (467)
T PTZ00284        204 TGHMCIVMPKY-GPCLLDWIMK---HGPFSHRHLAQIIFQTGVALDYF  247 (467)
T ss_pred             CceEEEEEecc-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence             4688999987 5688888754   23588899999999999999753

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.21  E-value=5.6e-10  Score=73.50  Aligned_cols=106  Identities=25%  Similarity=0.356  Sum_probs=88.4

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      |...+.||.|+++.|      ..+..+++|.+...... ....+..|+..+..+.|++++++++.+...+..++++|+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            456788999999987      23678999998765444 56778899999999999999999999988889999999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++|.+++.....  .+++.....++.+++.++.+
T Consensus        81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~  113 (225)
T smart00221       81 GGDLFDYLRKKGG--KLSEEEARFYLRQILEALEY  113 (225)
T ss_pred             CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHH
Confidence            9999999865221  17888999999999999975

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.21  E-value=1.7e-11  Score=86.95  Aligned_cols=120  Identities=21%  Similarity=0.260  Sum_probs=94.3

Q ss_pred             ccChhHHHHHc-cCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEee
Q 048150           21 QFDFETIEDAT-NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLG   90 (146)
Q Consensus        21 ~~~~~~~~~~~-~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~   90 (146)
                      +|.+-++...+ ..|+.-.+||+|+||.|      ..|.-+|.|.+.+.   +...-.....|-.++..++.++||.+--
T Consensus       173 QWK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaY  252 (591)
T KOG0986|consen  173 QWKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAY  252 (591)
T ss_pred             HHHHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEee
Confidence            33444443333 55888999999999988      45666676666432   1222344567888999999999999999


Q ss_pred             EEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           91 FCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        91 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .+.+.+.+++|+..|.||+|.-+|++.. ++.+++.....++.+|+.||..
T Consensus       253 AfeTkd~LClVLtlMNGGDLkfHiyn~g-~~gF~e~ra~FYAAEi~cGLeh  302 (591)
T KOG0986|consen  253 AFETKDALCLVLTLMNGGDLKFHIYNHG-NPGFDEQRARFYAAEIICGLEH  302 (591)
T ss_pred             eecCCCceEEEEEeecCCceeEEeeccC-CCCCchHHHHHHHHHHHhhHHH
Confidence            9999999999999999999999998854 4679999999999999999974

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.21  E-value=4.5e-10  Score=76.79  Aligned_cols=106  Identities=22%  Similarity=0.332  Sum_probs=81.7

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccCCccc--HHHHHHHHHHHhhC---CCCCeeeEeeEEEcCCc-----
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQG--AQEINNEVVVVAKL---QHINLVRLLGFCLEREE-----   97 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~--~~~~~~e~~~l~~l---~h~~i~~l~~~~~~~~~-----   97 (146)
                      |+..+.||+|+||.|      ..+..+++|.+.......  ...+..|+.++..+   .|++++++++.+...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            567789999999988      246789999986432222  34455677666555   69999999999988776     


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++||+.+ +|.+++... ....+++..+..++.|++.||.|
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~-~~~~l~~~~~~~~~~~i~~al~~  122 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKC-PKPGLPPETIKDLMRQLLRGVDF  122 (287)
T ss_pred             eEEEehhccc-CHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHH
Confidence            8999999985 788887642 22358899999999999999976

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.20  E-value=8.5e-12  Score=84.94  Aligned_cols=116  Identities=19%  Similarity=0.268  Sum_probs=90.2

Q ss_pred             HHHccCcccceeecccCceeecC----------CcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEc-
Q 048150           28 EDATNKFSTDNKLGEGGFGVLPN----------EHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLE-   94 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v~~----------~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~-   94 (146)
                      ......|+....||+|.||.|+.          ...+|+|.++.++.  .-.....+|+.+++.++|+|+++|..++.. 
T Consensus        20 ve~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~   99 (438)
T KOG0666|consen   20 VEDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH   99 (438)
T ss_pred             HHHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc
Confidence            34456688899999999999822          22578888765432  225667899999999999999999999887 


Q ss_pred             CCceeEEEEecCCCCHHHhhcCCC--CCCCCChHHHHHHHHHHHHHHhhhccCC
Q 048150           95 REEKILVYEYVPNKRLDNFLYEPE--KQGQWDCSRRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus        95 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~~~~~~  146 (146)
                      +..+++++||.++ +|...|..+.  ....++...+..++-||+.|++  ||||
T Consensus       100 d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~--YLH~  150 (438)
T KOG0666|consen  100 DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVH--YLHS  150 (438)
T ss_pred             CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhH--HHhh
Confidence            6679999999998 8999887532  2345788889999999999996  4553

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.20  E-value=9.7e-12  Score=84.19  Aligned_cols=108  Identities=17%  Similarity=0.164  Sum_probs=85.2

Q ss_pred             ccCccc-ceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcC----Cce
Q 048150           31 TNKFST-DNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLER----EEK   98 (146)
Q Consensus        31 ~~~~~~-~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~----~~~   98 (146)
                      +++|.+ -.+||-|.-|+|      ..|...|+|++.     +.+...+|+.+.... .|+||+.+++++...    .-+
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence            345543 367899988887      566677887774     456677888887766 799999999988653    237


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhcc
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL  144 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~  144 (146)
                      .+|||.++||.|...+++ .....++++.+..|+.||+.++.|.+.
T Consensus       135 LiVmE~meGGeLfsriq~-~g~~afTErea~eI~~qI~~Av~~lH~  179 (400)
T KOG0604|consen  135 LIVMECMEGGELFSRIQD-RGDQAFTEREASEIMKQIGLAVRYLHS  179 (400)
T ss_pred             EeeeecccchHHHHHHHH-cccccchHHHHHHHHHHHHHHHHHHHh
Confidence            899999999999999987 355669999999999999999987554

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.20  E-value=2.9e-10  Score=78.40  Aligned_cols=110  Identities=20%  Similarity=0.257  Sum_probs=85.6

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ..++|...+.||+|+||.|      ..+..+++|.+..... .....+..++.++... .|++++++++++...+..+++
T Consensus        13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v   92 (296)
T cd06618          13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC   92 (296)
T ss_pred             CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence            4467888999999999988      2377899999865422 2344566677766666 599999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+.+ ++.+++...  ...+++..+..++.+++.||.|.
T Consensus        93 ~e~~~~-~l~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~l  130 (296)
T cd06618          93 MELMST-CLDKLLKRI--QGPIPEDILGKMTVAIVKALHYL  130 (296)
T ss_pred             eeccCc-CHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999864 777766542  23588889999999999999753

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.19  E-value=3.4e-10  Score=78.29  Aligned_cols=109  Identities=21%  Similarity=0.257  Sum_probs=85.1

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC------
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ--GAQEINNEVVVVAKLQHINLVRLLGFCLERE------   96 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~------   96 (146)
                      ..+|...+.||+|+||.|      ..+..+++|.+......  ....+.+|+.++..++|++++++++.+....      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            578999999999999988      35678999988643221  2345678999999999999999988775433      


Q ss_pred             --ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 --EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                        .++++++|+.+ ++...+..  ....+++..+..++.|++++|.|.
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~l  131 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYL  131 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHH
Confidence              36899999876 67776654  234589999999999999999763

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.19  E-value=5.4e-12  Score=98.50  Aligned_cols=113  Identities=23%  Similarity=0.237  Sum_probs=94.0

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      .+-+|.....||.|.||.|      ..|...|+|.+...  .....+....|..++..+.|||++.++|.-...+..+|+
T Consensus      1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred             ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence            3445788899999999998      56778999998643  222345677899999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccC
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLF  145 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~  145 (146)
                      ||||.+|+|.+++..   ....++....-+..|++.|++|.+-|
T Consensus      1313 MEyC~~GsLa~ll~~---gri~dE~vt~vyt~qll~gla~LH~~ 1353 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEH---GRIEDEMVTRVYTKQLLEGLAYLHEH 1353 (1509)
T ss_pred             HHHhccCcHHHHHHh---cchhhhhHHHHHHHHHHHHHHHHHhc
Confidence            999999999999864   33478888889999999999886655

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.18  E-value=3.1e-10  Score=77.80  Aligned_cols=109  Identities=17%  Similarity=0.223  Sum_probs=83.4

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCC-CCCeeeEeeEEEcCCceeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQ-HINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ++|...+.||+|+||.|      ..+..+++|.+.... ......+..|+.++.++. |+|++++++.+...+..++++|
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e   83 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME   83 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence            34556778999999988      356789999986432 223556788998888885 9999999999988888999999


Q ss_pred             ecCCCCHHHhhcC--CCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYE--PEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~--~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+.. ++.++...  ......+++..+..++.+++.||.|
T Consensus        84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~  122 (288)
T cd06616          84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNY  122 (288)
T ss_pred             cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence            9875 55554321  1123458889999999999999975

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.15  E-value=2.4e-10  Score=80.50  Aligned_cols=107  Identities=18%  Similarity=0.268  Sum_probs=85.6

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc----
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE----   97 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~----   97 (146)
                      ..++|.....||+|++|.|      ..+..+++|.+....  ......+.+|+.++..+.|+|++++.+.+...+.    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            4567999999999999988      346789999876432  2234557789999999999999999887765544    


Q ss_pred             --eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           98 --KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        98 --~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                        .++++||+ +++|.+++..    ..+++..+..++.|++.||.|
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~  133 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKY  133 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHH
Confidence              89999998 5699998854    348899999999999999975

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.13  E-value=4.1e-10  Score=80.63  Aligned_cols=108  Identities=16%  Similarity=0.196  Sum_probs=85.8

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC-----C---CCeeeEeeEEEc---
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ-----H---INLVRLLGFCLE---   94 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~-----h---~~i~~l~~~~~~---   94 (146)
                      .+|.+..+||.|-|++|      .....||+|+.+.. ....+....|+.+|.+++     +   ..+++|++.|..   
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            67889999999999999      34567999998643 235677889999999873     2   268999998864   


Q ss_pred             -CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           95 -REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        95 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       +.++++|+|++.. +|..+|... ....++...+.+|+.|++.||.|.
T Consensus       157 NG~HVCMVfEvLGd-nLLklI~~s-~YrGlpl~~VK~I~~qvL~GLdYL  203 (590)
T KOG1290|consen  157 NGQHVCMVFEVLGD-NLLKLIKYS-NYRGLPLSCVKEICRQVLTGLDYL  203 (590)
T ss_pred             CCcEEEEEehhhhh-HHHHHHHHh-CCCCCcHHHHHHHHHHHHHHHHHH
Confidence             3469999998865 788888653 344589999999999999999873

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.13  E-value=1.6e-09  Score=76.29  Aligned_cols=106  Identities=18%  Similarity=0.273  Sum_probs=83.1

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC------
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLERE------   96 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~------   96 (146)
                      ..+|...+.||+|+||.|      ..|..+++|.+....  ......+.+|+.++..+.|+|++++.+++....      
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            468999999999999988      356789999986432  222456788999999999999999999886543      


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..++++||+.. +|...+.     ..+++..+..++.|++.||.|.
T Consensus        94 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~L  133 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYI  133 (342)
T ss_pred             eEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHH
Confidence            35899999874 6766542     2478889999999999999763

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.12  E-value=3.5e-10  Score=76.10  Aligned_cols=109  Identities=17%  Similarity=0.237  Sum_probs=88.7

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC----ccc----HHHHHHHHHHHhhC-CCCCeeeEeeEEEcC
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS----SQG----AQEINNEVVVVAKL-QHINLVRLLGFCLER   95 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~----~~~----~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~   95 (146)
                      -..|.-.+.+|+|..+.|      ..|...++|.+....    .+.    ...-..|+.+++++ .||+|+++.+.+.++
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~   95 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD   95 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence            345667788999988876      567788888885321    111    33456889999987 899999999999999


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ...++|+|.++.|.|.+++.+   ...++++....+++|+.+|+.|.
T Consensus        96 sF~FlVFdl~prGELFDyLts---~VtlSEK~tR~iMrqlfegVeyl  139 (411)
T KOG0599|consen   96 AFVFLVFDLMPRGELFDYLTS---KVTLSEKETRRIMRQLFEGVEYL  139 (411)
T ss_pred             chhhhhhhhcccchHHHHhhh---heeecHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999965   44589999999999999999873

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.11  E-value=6.6e-10  Score=81.76  Aligned_cols=113  Identities=19%  Similarity=0.279  Sum_probs=77.3

Q ss_pred             HccCcccceeecccCceeecCC----------------------cEEEEEEeccCCcccHHH--------------HHHH
Q 048150           30 ATNKFSTDNKLGEGGFGVLPNE----------------------HEIAVKRLSRSSSQGAQE--------------INNE   73 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~~~----------------------~~~a~k~~~~~~~~~~~~--------------~~~e   73 (146)
                      ..++|...+.||+|+||.|+.|                      ..||+|.+..........              ...|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            4678999999999999998543                      358999986432222222              2345


Q ss_pred             HHHHhhCCCCCe-----eeEeeEEEc--------CCceeEEEEecCCCCHHHhhcCCCC---------------------
Q 048150           74 VVVVAKLQHINL-----VRLLGFCLE--------REEKILVYEYVPNKRLDNFLYEPEK---------------------  119 (146)
Q Consensus        74 ~~~l~~l~h~~i-----~~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~---------------------  119 (146)
                      +..+.+++|.++     +.+.++|..        .+..++|+||+++++|.+++.....                     
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            666666665543     455555542        3468999999999999998864211                     


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhh
Q 048150          120 QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       120 ~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ...+++..+..++.|++.+|.|.
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~l  325 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKL  325 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHH
Confidence            11245677889999999999763

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.11  E-value=2.5e-09  Score=75.00  Aligned_cols=106  Identities=16%  Similarity=0.201  Sum_probs=81.5

Q ss_pred             CcccceeecccCceee------cC--CcEEEEEEeccC--CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcC----Cc
Q 048150           33 KFSTDNKLGEGGFGVL------PN--EHEIAVKRLSRS--SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLER----EE   97 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~--~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~----~~   97 (146)
                      +|...+.||+|+||.|      ..  +..+|+|.+...  .....+.+..|+.++..+ .|+|++++++.+...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            4778899999999988      23  668999988632  222345678899999988 699999998875432    34


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+++++++. ++|.+.+..   ...+++..+..++.|++.||.|.
T Consensus        81 ~~~~~e~~~-~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~L  121 (332)
T cd07857          81 LYLYEELME-ADLHQIIRS---GQPLTDAHFQSFIYQILCGLKYI  121 (332)
T ss_pred             EEEEEeccc-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH
Confidence            778888886 589888854   34588999999999999999763

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.09  E-value=1.7e-09  Score=76.62  Aligned_cols=100  Identities=15%  Similarity=0.131  Sum_probs=71.0

Q ss_pred             HHHccCcccceeecccCceeec-------CCcEEEEEEeccC-----CcccHHHHHHHHHHHhhCCCCCeee-EeeEEEc
Q 048150           28 EDATNKFSTDNKLGEGGFGVLP-------NEHEIAVKRLSRS-----SSQGAQEINNEVVVVAKLQHINLVR-LLGFCLE   94 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v~-------~~~~~a~k~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~-l~~~~~~   94 (146)
                      .....+|...+.||+|+||.|+       .+..+|+|.+...     .......+.+|+.++..++|+++++ +..    
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----   89 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----   89 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----
Confidence            3455779999999999999992       4556799886532     1112456889999999999999885 433    


Q ss_pred             CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           95 REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        95 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .+..+++|||+++++|.. +..   .   .   ...++.+++++|.|
T Consensus        90 ~~~~~LVmE~~~G~~L~~-~~~---~---~---~~~~~~~i~~aL~~  126 (365)
T PRK09188         90 TGKDGLVRGWTEGVPLHL-ARP---H---G---DPAWFRSAHRALRD  126 (365)
T ss_pred             cCCcEEEEEccCCCCHHH-hCc---c---c---hHHHHHHHHHHHHH
Confidence            246799999999999963 211   1   1   13456777777765

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.05  E-value=1.9e-09  Score=79.66  Aligned_cols=113  Identities=15%  Similarity=0.209  Sum_probs=78.6

Q ss_pred             HHccCcccceeecccCceeecCCc-------EEEEEE--------------ec---cCCcccHHHHHHHHHHHhhCCCCC
Q 048150           29 DATNKFSTDNKLGEGGFGVLPNEH-------EIAVKR--------------LS---RSSSQGAQEINNEVVVVAKLQHIN   84 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v~~~~-------~~a~k~--------------~~---~~~~~~~~~~~~e~~~l~~l~h~~   84 (146)
                      ....+|.+.+.||+|+||.|+...       ..+.+.              +.   .........+.+|+.++..++|+|
T Consensus       145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence            345789999999999999885311       111110              00   001112345678999999999999


Q ss_pred             eeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCC--CCCCChHHHHHHHHHHHHHHhhh
Q 048150           85 LVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK--QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        85 i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++++++...+..+++++++.+ ++.+++.....  ........+..++.|++.||.|.
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yL  283 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYI  283 (501)
T ss_pred             cCcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998865 67776653211  11233556778999999999863

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.03  E-value=2.7e-09  Score=71.37  Aligned_cols=92  Identities=14%  Similarity=0.070  Sum_probs=72.2

Q ss_pred             cCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcC
Q 048150           43 GGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE  116 (146)
Q Consensus        43 g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~  116 (146)
                      |.|+.|      ..+..+++|.+....     ....+...+....|+|++++++.+...+..++++||+++|+|.+.+..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            566666      567789999986432     122344445555799999999999999999999999999999998864


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          117 PEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       117 ~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .   ..+++..+..++.|++.||.|.
T Consensus        79 ~---~~l~~~~~~~~~~ql~~~l~~l  101 (237)
T cd05576          79 F---LNIPEECVKRWAAEMVVALDAL  101 (237)
T ss_pred             h---cCCCHHHHHHHHHHHHHHHHHH
Confidence            2   3488999999999999999763

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.02  E-value=1.5e-08  Score=65.59  Aligned_cols=100  Identities=29%  Similarity=0.454  Sum_probs=82.4

Q ss_pred             ecccCceee------cCCcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCHHH
Q 048150           40 LGEGGFGVL------PNEHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDN  112 (146)
Q Consensus        40 lg~g~fg~v------~~~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~  112 (146)
                      ||+|.+|.|      ..+..+++|.+...... ....+.+|+..+..+.|++++++.+.+......++++|++++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            578888877      23778999998654322 24678899999999999999999999988888999999999999999


Q ss_pred             hhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          113 FLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       113 ~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++....  ..+++..+..++.+++.++.+
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~  107 (215)
T cd00180          81 LLKENE--GKLSEDEILRILLQILEGLEY  107 (215)
T ss_pred             HHHhcc--CCCCHHHHHHHHHHHHHHHHH
Confidence            986522  357888999999999999975

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.00  E-value=4.1e-10  Score=78.31  Aligned_cols=119  Identities=18%  Similarity=0.229  Sum_probs=91.1

Q ss_pred             cChhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCC--C----CeeeEe
Q 048150           22 FDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQH--I----NLVRLL   89 (146)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h--~----~i~~l~   89 (146)
                      +-+........+|.++..+|+|.||+|      ..+..+|+|+++. -.........|+.++.++.+  |    .++.+.
T Consensus        79 ~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~-V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~  157 (415)
T KOG0671|consen   79 YVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKN-VDKYREAALIEIEVLQKINESDPNGKFRCVQMR  157 (415)
T ss_pred             EEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHH-HHHHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence            444444555788999999999999988      3467899999852 22345667788999998832  2    256677


Q ss_pred             eEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccC
Q 048150           90 GFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLF  145 (146)
Q Consensus        90 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~  145 (146)
                      ++|.-.++.++|+|.+. .++.+++.++ ...+++...+..++.|+++++.  |||
T Consensus       158 ~wFdyrghiCivfellG-~S~~dFlk~N-~y~~fpi~~ir~m~~QL~~sv~--fLh  209 (415)
T KOG0671|consen  158 DWFDYRGHICIVFELLG-LSTFDFLKEN-NYIPFPIDHIRHMGYQLLESVA--FLH  209 (415)
T ss_pred             hhhhccCceEEEEeccC-hhHHHHhccC-CccccchHHHHHHHHHHHHHHH--HHH
Confidence            88888999999999764 4899999873 4556899999999999999996  444

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.99  E-value=1.2e-08  Score=67.91  Aligned_cols=111  Identities=13%  Similarity=0.100  Sum_probs=79.7

Q ss_pred             HHHccCcccceeecccCceee----cCCcEEEEEEeccCCcccHH---H------HHHHHHHHhhCCCCCeeeEeeEEEc
Q 048150           28 EDATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQ---E------INNEVVVVAKLQHINLVRLLGFCLE   94 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~---~------~~~e~~~l~~l~h~~i~~l~~~~~~   94 (146)
                      .....+|+..+++|.|+||.|    ..+..+++|.+.........   .      +.+|+..+.++.|+++..+...+..
T Consensus        27 ~~l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~  106 (232)
T PRK10359         27 DFLSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL  106 (232)
T ss_pred             HHhhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence            345688999999999999988    45567999999654322222   2      5788889999999999988777553


Q ss_pred             C--------CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccC
Q 048150           95 R--------EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLF  145 (146)
Q Consensus        95 ~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~  145 (146)
                      .        +..+++|||++|.+|.++..       ++......++..+.+....+++|
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~~~~~~i~~~l~~lH~~gi~H  158 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISEDVKAKIKASIESLHQHGMVS  158 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhhh-------ccHHHHHHHHHHHHHHHHcCCcc
Confidence            2        35789999999999988742       23344445555555555556666

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.98  E-value=8.1e-10  Score=71.56  Aligned_cols=115  Identities=19%  Similarity=0.238  Sum_probs=90.6

Q ss_pred             HHHHHccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHH-hhCCCCCeeeEeeEEEcCCc
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVV-AKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l-~~l~h~~i~~l~~~~~~~~~   97 (146)
                      ++....++......||+|++|.|      +.|..+|+|.+...- .+.......++.+. +...+|.++.++|.......
T Consensus        40 ~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd  119 (282)
T KOG0984|consen   40 NFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD  119 (282)
T ss_pred             ccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence            34555566667788999999987      788999999997553 33456677888764 45589999999999988899


Q ss_pred             eeEEEEecCCCCHHHhhcC-CCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           98 KILVYEYVPNKRLDNFLYE-PEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .|+.||-+.. +|..+-.. .......++..+-+++..+..||.|
T Consensus       120 vwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~  163 (282)
T KOG0984|consen  120 VWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEF  163 (282)
T ss_pred             EEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHH
Confidence            9999999886 78776653 1345568999999999999999954

>PRK10345 hypothetical protein; Provisional

Probab=98.96  E-value=2.1e-08  Score=66.10  Aligned_cols=82  Identities=20%  Similarity=0.239  Sum_probs=62.0

Q ss_pred             ccceeecccCceeecCC---cEEEEEEeccCCcccHHHHHHHHHHHhhC-----CCCCeeeEeeEEEcCC---c-eeEEE
Q 048150           35 STDNKLGEGGFGVLPNE---HEIAVKRLSRSSSQGAQEINNEVVVVAKL-----QHINLVRLLGFCLERE---E-KILVY  102 (146)
Q Consensus        35 ~~~~~lg~g~fg~v~~~---~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~l~~~~~~~~---~-~~lv~  102 (146)
                      .-...||+|+|+.|+..   ...++|++..........+.+|+..+..+     .||||+.+++.+.++.   . ..+++
T Consensus         5 ~~~~~LG~G~~~~Vy~hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~   84 (210)
T PRK10345          5 SEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA   84 (210)
T ss_pred             CCcceecCCCceEEEECCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence            34578999999999322   22367777554344556789999999998     5799999999998864   3 33789


Q ss_pred             Ee--cCCCCHHHhhcC
Q 048150          103 EY--VPNKRLDNFLYE  116 (146)
Q Consensus       103 e~--~~~g~L~~~l~~  116 (146)
                      ||  +++|+|.+++.+
T Consensus        85 e~~G~~~~tL~~~l~~  100 (210)
T PRK10345         85 DFDGKPSITLTEFAEQ  100 (210)
T ss_pred             cCCCCcchhHHHHHHc
Confidence            99  668999999965

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.95  E-value=8.8e-09  Score=66.95  Aligned_cols=100  Identities=13%  Similarity=0.049  Sum_probs=67.6

Q ss_pred             ceeecccCceee-----cCCcEEEEEEeccCCcc--c------------------------HHHHHHHHHHHhhCCCCCe
Q 048150           37 DNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQ--G------------------------AQEINNEVVVVAKLQHINL   85 (146)
Q Consensus        37 ~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~--~------------------------~~~~~~e~~~l~~l~h~~i   85 (146)
                      ...||+|+||.|     ..|..+|+|.++.....  .                        ......|+..+..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            467999999998     45789999998654211  1                        0122358888888876665


Q ss_pred             eeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           86 VRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        86 ~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ...... .. ...+++|||++++++......   ...++...+..++.|++.+|.+
T Consensus        82 ~~p~~~-~~-~~~~iVmE~i~g~~l~~~~~~---~~~~~~~~~~~i~~qi~~~L~~  132 (190)
T cd05147          82 PCPEPI-LL-KSHVLVMEFIGDDGWAAPRLK---DAPLSESKARELYLQVIQIMRI  132 (190)
T ss_pred             CCCcEE-Ee-cCCEEEEEEeCCCCCcchhhh---cCCCCHHHHHHHHHHHHHHHHH
Confidence            332221 11 223799999999876554322   2357888899999999998875

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.92  E-value=1.8e-08  Score=66.87  Aligned_cols=89  Identities=20%  Similarity=0.247  Sum_probs=75.8

Q ss_pred             CCcEEEEEEeccCCccc-HHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHH
Q 048150           50 NEHEIAVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRR  128 (146)
Q Consensus        50 ~~~~~a~k~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~  128 (146)
                      .+..+++|.+....... ...+..|+..+..++|++++++.+.+......++++||+++++|.+++...   ..+++..+
T Consensus        13 ~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~---~~~~~~~~   89 (244)
T smart00220       13 TGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKR---GRLSEDEA   89 (244)
T ss_pred             CCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhc---cCCCHHHH
Confidence            46789999987544333 678899999999999999999999999888999999999999999998642   22788899


Q ss_pred             HHHHHHHHHHHhh
Q 048150          129 YKIIGGRGRDCSR  141 (146)
Q Consensus       129 ~~i~~~i~~~l~~  141 (146)
                      ..++.+++.++.|
T Consensus        90 ~~~~~~l~~~l~~  102 (244)
T smart00220       90 RFYARQILSALEY  102 (244)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999976

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.91  E-value=4.2e-11  Score=79.60  Aligned_cols=111  Identities=22%  Similarity=0.363  Sum_probs=86.3

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc-----
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLE-----   94 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~-----   94 (146)
                      ++..+.|.....+|+|.||.|      ..|..|++|.+-..  +........+|+.++..+.|+|++.+++.|.+     
T Consensus        13 ~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~   92 (376)
T KOG0669|consen   13 CDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPT   92 (376)
T ss_pred             eecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCc
Confidence            344567888899999999988      34566787765432  23335667899999999999999998887753     


Q ss_pred             ---CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           95 ---REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        95 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                         ...+++|+++|++ +|.-++.+  ....++...+..++.++..||.|
T Consensus        93 ~r~r~t~ylVf~~ceh-DLaGlLsn--~~vr~sls~Ikk~Mk~Lm~GL~~  139 (376)
T KOG0669|consen   93 NRDRATFYLVFDFCEH-DLAGLLSN--RKVRFSLSEIKKVMKGLMNGLYY  139 (376)
T ss_pred             ccccceeeeeHHHhhh-hHHHHhcC--ccccccHHHHHHHHHHHHHHHHH
Confidence               1238999999998 89988876  33457888999999999999965

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.88  E-value=2e-09  Score=70.90  Aligned_cols=103  Identities=18%  Similarity=0.286  Sum_probs=84.0

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCC--ceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLERE--EKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~--~~~l  100 (146)
                      ..++|.+.+.+|+|.++.|      .....+.+|.+++-   ..+.+.+|+.++..+ .|+||++|.+...++.  .+.|
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL  112 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL  112 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence            3478999999999999988      34457888888532   456788999999999 5999999999988765  4889


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++||+.+.+...+..      .++-..+..++.+++.+|.|
T Consensus       113 iFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdy  147 (338)
T KOG0668|consen  113 IFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDY  147 (338)
T ss_pred             HhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhH
Confidence            999999988777653      36667789999999999986

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.84  E-value=6.1e-08  Score=63.75  Aligned_cols=98  Identities=11%  Similarity=0.160  Sum_probs=72.1

Q ss_pred             eeecccCceeec----CCcEEEEEEeccCCccc--------HHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           38 NKLGEGGFGVLP----NEHEIAVKRLSRSSSQG--------AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        38 ~~lg~g~fg~v~----~~~~~a~k~~~~~~~~~--------~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      +.||+|++|.|+    .|..+++|.........        ...+..|+.++..+.++++.....++...+..+++|||+
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   81 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI   81 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence            568999999983    45788899765332111        234678899999998888776666666677789999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++|.+++...      .. ....++.+++.+|.+.
T Consensus        82 ~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~l  111 (211)
T PRK14879         82 EGEPLKDLINSN------GM-EELELSREIGRLVGKL  111 (211)
T ss_pred             CCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHH
Confidence            999999988531      11 6777888888877653

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.80  E-value=1.4e-07  Score=61.35  Aligned_cols=100  Identities=13%  Similarity=0.092  Sum_probs=67.5

Q ss_pred             ceeecccCceee-----cCCcEEEEEEeccCCcc---------------------c-----HHHHHHHHHHHhhCCCCCe
Q 048150           37 DNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQ---------------------G-----AQEINNEVVVVAKLQHINL   85 (146)
Q Consensus        37 ~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~---------------------~-----~~~~~~e~~~l~~l~h~~i   85 (146)
                      ...||+|+||.|     ..|..+|+|.+......                     .     ......|...+..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            467999999998     35789999998754211                     0     1223578888888888876


Q ss_pred             eeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           86 VRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        86 ~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .........  ..+++|||++++++......   ...++......++.+++.++.+
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~---~~~~~~~~~~~i~~~l~~~l~~  132 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK---DVPLEEEEAEELYEQVVEQMRR  132 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhhh---hccCCHHHHHHHHHHHHHHHHH
Confidence            443333222  24799999998855433221   2236677888899999988865

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.77  E-value=1.3e-09  Score=73.50  Aligned_cols=95  Identities=23%  Similarity=0.322  Sum_probs=74.4

Q ss_pred             cCCcEEEEEEecc--CCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChH
Q 048150           49 PNEHEIAVKRLSR--SSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCS  126 (146)
Q Consensus        49 ~~~~~~a~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~  126 (146)
                      +.|..+..|++..  ........|..|...++...||||+.+.+.|..++++.++..|++.|+|+..+... .....+-.
T Consensus       211 wqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~-t~vvvd~s  289 (448)
T KOG0195|consen  211 WQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQ-TSVVVDHS  289 (448)
T ss_pred             ccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcC-ccEEEecc
Confidence            4455666666542  23333556778877788889999999999999999999999999999999999763 34456788


Q ss_pred             HHHHHHHHHHHHHhhhccCC
Q 048150          127 RRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus       127 ~~~~i~~~i~~~l~~~~~~~  146 (146)
                      +...++.++++||+  ||||
T Consensus       290 qav~faldiargma--flhs  307 (448)
T KOG0195|consen  290 QAVRFALDIARGMA--FLHS  307 (448)
T ss_pred             hHHHHHHHHHhhHH--HHhh
Confidence            99999999999996  5554

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.76  E-value=5.9e-08  Score=68.40  Aligned_cols=107  Identities=20%  Similarity=0.318  Sum_probs=89.5

Q ss_pred             HHHHccCcccceeecccCceee------c---CCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCC
Q 048150           27 IEDATNKFSTDNKLGEGGFGVL------P---NEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLERE   96 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v------~---~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~   96 (146)
                      +......|..++.||+|.|+.|      .   .+..+|+|.+...  +....+..|+.+|..+ .+.|++++.+++...+
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence            4455577999999999999988      2   5567999998643  3456788999999998 6889999999999999


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ...+|+||.++-+..++...      ++...+..++..+..+|.+
T Consensus       109 ~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~  147 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAH  147 (418)
T ss_pred             eeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhh
Confidence            99999999999999888854      5677788888889888875

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.75  E-value=3.7e-08  Score=71.92  Aligned_cols=112  Identities=15%  Similarity=0.138  Sum_probs=83.7

Q ss_pred             HHccCcccceeecccCceee-----cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeE
Q 048150           29 DATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ...+.|.+.+.||+|+-+.|     .....+|+|.+...  +......+..|+.+|.++ +|.+|+.|+++-..++.+|+
T Consensus       358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm  437 (677)
T KOG0596|consen  358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM  437 (677)
T ss_pred             ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence            34466899999999999988     22245666665432  344578899999999999 68999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      |||+=+. +|...|++..... ..| .+..+-.|+++++.+.|
T Consensus       438 vmE~Gd~-DL~kiL~k~~~~~-~~~-~lk~ywkqML~aV~~IH  477 (677)
T KOG0596|consen  438 VMECGDI-DLNKILKKKKSID-PDW-FLKFYWKQMLLAVKTIH  477 (677)
T ss_pred             Eeecccc-cHHHHHHhccCCC-chH-HHHHHHHHHHHHHHHHH
Confidence            9996655 9999998744332 223 56677777777776544

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.73  E-value=1.8e-09  Score=72.33  Aligned_cols=109  Identities=16%  Similarity=0.216  Sum_probs=82.7

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHH-HhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVV-VAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~-l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      .+.+-...||.|+||.|      ..|..+|||+++.... ...+.+..|..+ ++.-.+|+|++++|.+...+..|+-||
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME  143 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME  143 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence            34455678999999998      6788999999976543 346677788765 555589999999999999999999999


Q ss_pred             ecCCCCHHHhhcC--CCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYE--PEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~--~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .|+- ++..+...  ......+++..+..+....+.||.|
T Consensus       144 LMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~y  182 (361)
T KOG1006|consen  144 LMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDY  182 (361)
T ss_pred             HHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHH
Confidence            9876 66554421  0123347888888888888888876

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.72  E-value=1.7e-07  Score=70.03  Aligned_cols=100  Identities=15%  Similarity=0.240  Sum_probs=71.8

Q ss_pred             cCcccceeecccCceeecC----CcEEEEEEeccC--Cc------ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           32 NKFSTDNKLGEGGFGVLPN----EHEIAVKRLSRS--SS------QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~~----~~~~a~k~~~~~--~~------~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ..|...+.||+|+||.|+.    +..+++|.....  ..      .....+.+|+.++..+.|++++....++...+..+
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~  412 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT  412 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence            3345678999999999954    444555443211  11      01245788999999999999887766666667788


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|||+++++|.+++.           ....++.+++++|.+.
T Consensus       413 lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~l  444 (535)
T PRK09605        413 IVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKL  444 (535)
T ss_pred             EEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHH
Confidence            9999999999998874           2456777888887653

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.67  E-value=1.2e-07  Score=65.68  Aligned_cols=112  Identities=20%  Similarity=0.212  Sum_probs=83.2

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeE
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ....-.|+++++||+|+||++      .++..||+|.=+.  ......+..|.+..+.+ ..+.|+..+-+...+.+-.|
T Consensus        24 ~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiL  101 (449)
T KOG1165|consen   24 LMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNIL  101 (449)
T ss_pred             eEecccceeccccccCcceeeecccccccCceEEEEeccc--cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhh
Confidence            344567999999999999988      6677999997432  22345567788888887 56788877665555566678


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhcc
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL  144 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~  144 (146)
                      |+|.+ |.+|+++..  .....++.+.+..++.|++.-+.|.+-
T Consensus       102 VidLL-GPSLEDLFD--~CgR~FSvKTV~miA~Qmi~rie~vH~  142 (449)
T KOG1165|consen  102 VIDLL-GPSLEDLFD--LCGRRFSVKTVAMIAKQMITRIEYVHE  142 (449)
T ss_pred             hhhhh-CcCHHHHHH--HhcCcccHHhHHHHHHHHHHHHHHHHh
Confidence            99976 558888773  234558899999999999988876443

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=98.66  E-value=1.6e-09  Score=78.34  Aligned_cols=111  Identities=17%  Similarity=0.193  Sum_probs=89.8

Q ss_pred             HccCcccceeecccCceee----cCCcE--EEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL----PNEHE--IAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v----~~~~~--~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ..++++....||-|+||.|    .++..  .|+|++++.   .......+..|-++|..+.+++|++++..|.+...+|+
T Consensus       418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm  497 (732)
T KOG0614|consen  418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM  497 (732)
T ss_pred             chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence            3466778889999999987    33333  677877643   22335567788899999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      +||-|-||.|...+++   ...++......++..+.+|+.|.+
T Consensus       498 LmEaClGGElWTiLrd---Rg~Fdd~tarF~~acv~EAfeYLH  537 (732)
T KOG0614|consen  498 LMEACLGGELWTILRD---RGSFDDYTARFYVACVLEAFEYLH  537 (732)
T ss_pred             hHHhhcCchhhhhhhh---cCCcccchhhhhHHHHHHHHHHHH
Confidence            9999999999999976   345888889999999999987643

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.64  E-value=4.7e-07  Score=59.03  Aligned_cols=93  Identities=15%  Similarity=0.248  Sum_probs=63.5

Q ss_pred             eecccCceee----cCCcEEEEEEeccCCcc--c------HHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           39 KLGEGGFGVL----PNEHEIAVKRLSRSSSQ--G------AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        39 ~lg~g~fg~v----~~~~~~a~k~~~~~~~~--~------~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      .||+|+||.|    ..+..+++|........  .      ...+..|+.++..+.++++......+...+..+++|||++
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            3799999998    35558899986432111  1      2446689999999887765444444455666789999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++|.+++...  .  .      .++.+++.+|.+
T Consensus        81 g~~l~~~~~~~--~--~------~~~~~i~~~l~~  105 (199)
T TIGR03724        81 GKPLKDVIEEG--N--D------ELLREIGRLVGK  105 (199)
T ss_pred             CccHHHHHhhc--H--H------HHHHHHHHHHHH
Confidence            99999887431  1  0      566666666654

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=98.63  E-value=5e-08  Score=71.01  Aligned_cols=117  Identities=15%  Similarity=0.161  Sum_probs=93.0

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCC------CeeeEeeEEEcC
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHI------NLVRLLGFCLER   95 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~l~~~~~~~   95 (146)
                      .....+|.+....|+|-|+.|      ..|..||||++.-. .-..+.=+.|+.+|..+...      +.+.|+..|...
T Consensus       428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk  506 (752)
T KOG0670|consen  428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK  506 (752)
T ss_pred             hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc
Confidence            444467888889999999988      45679999999633 22345567899999988542      567788888889


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh----hccCC
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR----NFLFS  146 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~----~~~~~  146 (146)
                      +++|||+|.+.- +|.+.+.....+..+....+..++.|+..+|..    ++||.
T Consensus       507 nHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHa  560 (752)
T KOG0670|consen  507 NHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHA  560 (752)
T ss_pred             ceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeec
Confidence            999999998765 899999887778889999999999999988865    66663

>smart00090 RIO RIO-like kinase

Probab=98.60  E-value=5.5e-07  Score=60.56  Aligned_cols=115  Identities=10%  Similarity=0.099  Sum_probs=76.9

Q ss_pred             ccChhHHHHHccCcccceeecccCceee-------cCCcEEEEEEeccCCcc-------------------c-----HHH
Q 048150           21 QFDFETIEDATNKFSTDNKLGEGGFGVL-------PNEHEIAVKRLSRSSSQ-------------------G-----AQE   69 (146)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~lg~g~fg~v-------~~~~~~a~k~~~~~~~~-------------------~-----~~~   69 (146)
                      ..+...+.....-|.+.+.||+|+||.|       ..|..+|+|.+......                   .     ...
T Consensus        17 ~~~~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (237)
T smart00090       17 RLALYSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLW   96 (237)
T ss_pred             HHHHHHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHH
Confidence            3344455555566889999999999988       25678999998643210                   0     122


Q ss_pred             HHHHHHHHhhCCCC--CeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           70 INNEVVVVAKLQHI--NLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        70 ~~~e~~~l~~l~h~--~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +..|+..+..+.+.  .++.+++.    ...+++|||++++++......   ...++......++.+++.++.+.
T Consensus        97 ~~~E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~L  164 (237)
T smart00090       97 AEKEFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK---DVEPEEEEEFELYDDILEEMRKL  164 (237)
T ss_pred             HHHHHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccccc---cCCcchHHHHHHHHHHHHHHHHH
Confidence            45788888888643  23344432    234799999999888765422   22355556778899999998764

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.52  E-value=1.1e-07  Score=72.21  Aligned_cols=104  Identities=18%  Similarity=0.228  Sum_probs=75.7

Q ss_pred             cccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           34 FSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      |.-.+++|.|+-|.+     +.|+.||||++..   +......+|+.++..- .||||+.+++.-.++...|+..|.|..
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~  587 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC  587 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeCCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh
Confidence            445567888888865     7788999999853   2345567999999988 799999999887778889999999876


Q ss_pred             CCHHHhhcCCCCCCCCCh-HHHHHHHHHHHHHHhh
Q 048150          108 KRLDNFLYEPEKQGQWDC-SRRYKIIGGRGRDCSR  141 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~-~~~~~i~~~i~~~l~~  141 (146)
                       +|.+++........... -....+..|++.||++
T Consensus       588 -sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaH  621 (903)
T KOG1027|consen  588 -SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAH  621 (903)
T ss_pred             -hHHHHHhccccchhhcccccHHHHHHHHHHHHHH
Confidence             99999976311110111 2345677777777753

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.51  E-value=6.8e-07  Score=67.15  Aligned_cols=109  Identities=19%  Similarity=0.184  Sum_probs=64.6

Q ss_pred             HccCcccceeecccCceeec------C----CcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeE------EE
Q 048150           30 ATNKFSTDNKLGEGGFGVLP------N----EHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGF------CL   93 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~------~----~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~------~~   93 (146)
                      ..++|...+.||+|+||.|+      .    +..+++|.+.....  ......+ .+ ....+.++..+...      ..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e-~l-~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE-RV-RRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH-HH-HhhchhhHHHHHHhhhcccccc
Confidence            45789999999999999992      3    67899998753221  1111111 11 11111111111110      23


Q ss_pred             cCCceeEEEEecCCCCHHHhhcCCCCCC-----------------CCChHHHHHHHHHHHHHHhhh
Q 048150           94 EREEKILVYEYVPNKRLDNFLYEPEKQG-----------------QWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        94 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~-----------------~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .....++++||+++++|.+++.......                 ......+..++.|++.||.|.
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yL  271 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGL  271 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHH
Confidence            4567899999999999999986532110                 011234567899999999763

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.51  E-value=1.8e-07  Score=66.12  Aligned_cols=121  Identities=18%  Similarity=0.222  Sum_probs=89.7

Q ss_pred             hHHHHHccCcccceeecccCceeecCCc-----------EEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEE
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVLPNEH-----------EIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFC   92 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v~~~~-----------~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~   92 (146)
                      .++.....+++....+-+|.||.|+.|.           .+.+|.++....+ ....+..|.-++..+.|+|+.++.+.+
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            4555666778888999999999996652           2333333221111 134466777788889999999998888


Q ss_pred             EcC-CceeEEEEecCCCCHHHhhc-----CCCCCCCCChHHHHHHHHHHHHHHhhhccC
Q 048150           93 LER-EEKILVYEYVPNKRLDNFLY-----EPEKQGQWDCSRRYKIIGGRGRDCSRNFLF  145 (146)
Q Consensus        93 ~~~-~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~  145 (146)
                      ... ..++..+.+..-|+|..+++     +......+...++..++.|++.||.|.+-|
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~  415 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH  415 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc
Confidence            754 56888899999999999998     555566678889999999999999876544

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=98.49  E-value=1.5e-07  Score=63.57  Aligned_cols=106  Identities=16%  Similarity=0.239  Sum_probs=79.1

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEe-eEEEcCCceeEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLL-GFCLEREEKILVY  102 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~-~~~~~~~~~~lv~  102 (146)
                      .+.|.+.+.+|+|.||++      .....+++|.++.. ......|.+|..--.-+ .|.||+.-+ ..|.+.+...+++
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q  101 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ  101 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence            356788899999999998      34457888988543 22467788887654444 578887644 4455667788899


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||++.|+|.+-+..    ..+-+.....++.|++.++.|
T Consensus       102 E~aP~gdL~snv~~----~GigE~~~K~v~~ql~SAi~f  136 (378)
T KOG1345|consen  102 EFAPRGDLRSNVEA----AGIGEANTKKVFAQLLSAIEF  136 (378)
T ss_pred             ccCccchhhhhcCc----ccccHHHHHHHHHHHHHHHHH
Confidence            99999999887743    346778889999999999865

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.49  E-value=1.7e-06  Score=60.70  Aligned_cols=111  Identities=19%  Similarity=0.301  Sum_probs=81.7

Q ss_pred             CcccceeecccCceeecC-------CcEEEEEEeccCCcccHHHHHHHHHHHhhCC----CCCeeeEeeEEE-cCCceeE
Q 048150           33 KFSTDNKLGEGGFGVLPN-------EHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ----HINLVRLLGFCL-EREEKIL  100 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v~~-------~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~----h~~i~~l~~~~~-~~~~~~l  100 (146)
                      +|.+...||+|+||.|+.       ...+|+|.-..........+..|..++..+.    .++++.+++... ....-++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            799999999999999822       2357888765432222226777888888775    357788888773 6667889


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh----hccC
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR----NFLF  145 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~----~~~~  145 (146)
                      ||+.+ |.+|.++..... ...++......++.|++.+|.+    +|+|
T Consensus        99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G~iH  145 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKGFIH  145 (322)
T ss_pred             EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcCccc
Confidence            99865 559999875533 4568999999999999999974    5555

>PHA02882 putative serine/threonine kinase; Provisional

Probab=98.49  E-value=2.6e-06  Score=58.87  Aligned_cols=109  Identities=10%  Similarity=0.109  Sum_probs=68.6

Q ss_pred             HccCcccceeecccCceeecC---------CcEEEEEEeccCCccc-HH----------HHHHHHHHHhhCCCCCeeeEe
Q 048150           30 ATNKFSTDNKLGEGGFGVLPN---------EHEIAVKRLSRSSSQG-AQ----------EINNEVVVVAKLQHINLVRLL   89 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~~---------~~~~a~k~~~~~~~~~-~~----------~~~~e~~~l~~l~h~~i~~l~   89 (146)
                      ...+|.+.+.||+|+||.|+.         +..+++|......... ..          ....+...+..+.|++++.++
T Consensus        10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~   89 (294)
T PHA02882         10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY   89 (294)
T ss_pred             CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence            446799999999999999932         2345566543221111 01          111223344567899999999


Q ss_pred             eEEEcCC----ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           90 GFCLERE----EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        90 ~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++....    ..+++++++.. ++.+.+..   ....++..+..++.|++.||.|.
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~l  142 (294)
T PHA02882         90 GCGSFKRCRMYYRFILLEKLVE-NTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYI  142 (294)
T ss_pred             EeeeEecCCceEEEEEEehhcc-CHHHHHHh---hccCCHHHHHHHHHHHHHHHHHH
Confidence            8765443    23567776544 56666543   22256778899999999999763

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.45  E-value=1.1e-06  Score=58.64  Aligned_cols=111  Identities=18%  Similarity=0.280  Sum_probs=81.5

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCC-CCeeeEeeEEEcCCceeEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQH-INLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ....|.+++.||.|+||.+      ..|..||+|.=... . ....+.-|.++...+++ ..++.+..+..+...-.+||
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~-a-~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM   90 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK-A-KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM   90 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc-C-CCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence            3467999999999999987      56789999984321 1 23345678888888854 56666666666677778999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh----hccC
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR----NFLF  145 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~----~~~~  145 (146)
                      +.. |.+|+++..-  ....++.+..+.++.|++.-+.|    +|||
T Consensus        91 dLL-GPsLEdLfnf--C~R~ftmkTvLMLaDQml~RiEyvH~r~fiH  134 (341)
T KOG1163|consen   91 DLL-GPSLEDLFNF--CSRRFTMKTVLMLADQMLSRIEYVHLRNFIH  134 (341)
T ss_pred             ecc-CccHHHHHHH--HhhhhhHHhHHHHHHHHHHHHHHHHhhcccc
Confidence            976 5599998753  23347788899999998888877    5555

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=98.40  E-value=2.1e-07  Score=62.99  Aligned_cols=106  Identities=19%  Similarity=0.246  Sum_probs=83.6

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccC-CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS-SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      +.+.+..||.|.-|.|      ..|..+|||.+.++ ..+..+++...+.++... .+|.|++.+|+|..+...++.||.
T Consensus        93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel  172 (391)
T KOG0983|consen   93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL  172 (391)
T ss_pred             HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence            3455677899999988      45789999999866 344567888888877776 489999999999999999999987


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +.. .+..++..  ...++++..+..+...++.+|.|
T Consensus       173 Ms~-C~ekLlkr--ik~piPE~ilGk~tva~v~AL~Y  206 (391)
T KOG0983|consen  173 MST-CAEKLLKR--IKGPIPERILGKMTVAIVKALYY  206 (391)
T ss_pred             HHH-HHHHHHHH--hcCCchHHhhhhhHHHHHHHHHH
Confidence            754 45555543  23448999999999999999988

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.40  E-value=4.5e-06  Score=54.51  Aligned_cols=112  Identities=13%  Similarity=0.115  Sum_probs=69.5

Q ss_pred             hHHHHHccCcccceeecccCceee-----cCCcEEEEEEeccCCcc----------------------cHHHHHHHHHHH
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQ----------------------GAQEINNEVVVV   77 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~----------------------~~~~~~~e~~~l   77 (146)
                      +++.....-|...+.||+|+||.|     ..|..+++|++......                      .......|..++
T Consensus         8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   87 (198)
T cd05144           8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL   87 (198)
T ss_pred             HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence            344444445788899999999998     35789999987543210                      011245677777


Q ss_pred             hhCCCCC--eeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccC
Q 048150           78 AKLQHIN--LVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLF  145 (146)
Q Consensus        78 ~~l~h~~--i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~  145 (146)
                      ..+.+++  ++...+    ....+++|||+++++|......     .........++.++......+++|
T Consensus        88 ~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-----~~~~~~~~~i~~~l~~lh~~gi~H  148 (198)
T cd05144          88 KALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL-----EDPEEVLDEILEEIVKAYKHGIIH  148 (198)
T ss_pred             HHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc-----ccHHHHHHHHHHHHHHHHHCCCCc
Confidence            7776653  333332    2445899999999998765421     122334445555555555556666

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.39  E-value=2.9e-08  Score=67.13  Aligned_cols=106  Identities=16%  Similarity=0.271  Sum_probs=79.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC-----ce
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLERE-----EK   98 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~-----~~   98 (146)
                      -++.-+..||-|+||.|      +.|..+++|.+..-  .....+.+-+|+.++.-.+|.|+++..+....++     .+
T Consensus        53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi  132 (449)
T KOG0664|consen   53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL  132 (449)
T ss_pred             ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence            34667789999999998      56888898887421  2223577889999999999999998877654332     26


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+++|.+.. +|.+.|-+   ...++...+.-++-||++||.|
T Consensus       133 YV~TELmQS-DLHKIIVS---PQ~Ls~DHvKVFlYQILRGLKY  171 (449)
T KOG0664|consen  133 YVLTELMQS-DLHKIIVS---PQALTPDHVKVFVYQILRGLKY  171 (449)
T ss_pred             HHHHHHHHh-hhhheecc---CCCCCcchhhhhHHHHHhhhHH
Confidence            677777765 78777754   3457778899999999999976

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.34  E-value=1.6e-07  Score=73.90  Aligned_cols=67  Identities=31%  Similarity=0.470  Sum_probs=55.2

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLER   95 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~   95 (146)
                      +-..+|.....||+|+||.|      ..|..+|+|.++... ......+.+|+.++.+++|||++.++..|...
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs  549 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVES  549 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhcc
Confidence            44577889999999999988      578899999997543 22356688999999999999999999888653

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.32  E-value=8.3e-07  Score=65.67  Aligned_cols=105  Identities=22%  Similarity=0.277  Sum_probs=79.7

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhh-CCCCCeeeEeeEEEcCCceeEEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAK-LQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ...|.....+|.|+|+.+      ..+...++|++....    ....+|+.++.. -+|+|++++++.+....+.++|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            566888888999999987      455667888886441    223355544444 489999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      .+.++.+.+.+..   .. .....+..++.+++.++.|.|
T Consensus       397 ~l~g~ell~ri~~---~~-~~~~e~~~w~~~lv~Av~~LH  432 (612)
T KOG0603|consen  397 LLDGGELLRRIRS---KP-EFCSEASQWAAELVSAVDYLH  432 (612)
T ss_pred             hccccHHHHHHHh---cc-hhHHHHHHHHHHHHHHHHHHH
Confidence            9999998887754   11 223678889999999987643

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.32  E-value=2.4e-05  Score=53.64  Aligned_cols=108  Identities=26%  Similarity=0.370  Sum_probs=83.8

Q ss_pred             cccceeecccCceeecCC---cEEEEEEeccCCcc---cHHHHHHHHHHHhhCCCC-CeeeEeeEEEcCCceeEEEEecC
Q 048150           34 FSTDNKLGEGGFGVLPNE---HEIAVKRLSRSSSQ---GAQEINNEVVVVAKLQHI-NLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v~~~---~~~a~k~~~~~~~~---~~~~~~~e~~~l~~l~h~-~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      |.....+|.|+|+.|+..   ..+++|.+......   ....+.+|+.++..+.|+ +++.+.+.+......+++++++.
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~   81 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVD   81 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEeccEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCC
Confidence            567788999999888322   56788888654322   366788999999999887 79999999977777899999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++++.+++........++......+..+++.++.|
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  116 (384)
T COG0515          82 GGSLEDLLKKIGRKGPLSESEALFILAQILSALEY  116 (384)
T ss_pred             CCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHH
Confidence            99999777542111257888999999999999773

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.27  E-value=1.1e-05  Score=49.59  Aligned_cols=93  Identities=13%  Similarity=0.148  Sum_probs=66.5

Q ss_pred             ceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCC--CCeeeEeeEEEcCCceeEEEEecCCCCH
Q 048150           37 DNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQH--INLVRLLGFCLEREEKILVYEYVPNKRL  110 (146)
Q Consensus        37 ~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~l~~~~~~~~~~~lv~e~~~~g~L  110 (146)
                      .+.+|.|.++.|    ..+..+++|.......  ...+..|+.++..+.+  ..++++.......+..++++||++++.+
T Consensus         3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~   80 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL   80 (155)
T ss_pred             ceecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence            467899999987    3446788998754322  4567888888888865  4778888777777789999999998776


Q ss_pred             HHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       111 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ..+          +......++.+++.++.+
T Consensus        81 ~~~----------~~~~~~~~~~~~~~~l~~  101 (155)
T cd05120          81 DEV----------SEEEKEDIAEQLAELLAK  101 (155)
T ss_pred             ccC----------CHHHHHHHHHHHHHHHHH
Confidence            543          334455566666666654

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.18  E-value=5.2e-05  Score=50.04  Aligned_cols=76  Identities=18%  Similarity=0.246  Sum_probs=53.4

Q ss_pred             ccceeecccCceee----cCCcEEEEEEeccCCc--cc--HHHHHHHHHHHhhCC-CCCeeeEeeEEEcCCceeEEEEec
Q 048150           35 STDNKLGEGGFGVL----PNEHEIAVKRLSRSSS--QG--AQEINNEVVVVAKLQ-HINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        35 ~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~--~~--~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      .....|++|.||.|    ..+.+++.+.+.....  ..  ...+.+|+.+|.++. +++++.++++    +..+++|+|+
T Consensus         5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            45678999999998    4455666555532211  11  124779999999995 5778888775    4568999999


Q ss_pred             CCCCHHHhh
Q 048150          106 PNKRLDNFL  114 (146)
Q Consensus       106 ~~g~L~~~l  114 (146)
                      +|.+|.+.+
T Consensus        81 ~G~~L~~~~   89 (218)
T PRK12274         81 AGAAMYQRP   89 (218)
T ss_pred             cCccHHhhh
Confidence            999887543

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=97.92  E-value=2.2e-05  Score=57.66  Aligned_cols=64  Identities=20%  Similarity=0.296  Sum_probs=56.7

Q ss_pred             HhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        77 l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |..+.|.|+.++.|.+..++..+++.+||..|+|.+.+.+  ....+++.....++++++.||.|.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~yl   64 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYL   64 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999976  345589999999999999999653

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.91  E-value=0.00053  Score=46.28  Aligned_cols=109  Identities=14%  Similarity=0.076  Sum_probs=65.7

Q ss_pred             CcccceeecccCceee-cCCcEEEEEEeccCC-------------cccHHHHHHHHHHHhhCCCCCe--eeEeeEEEcCC
Q 048150           33 KFSTDNKLGEGGFGVL-PNEHEIAVKRLSRSS-------------SQGAQEINNEVVVVAKLQHINL--VRLLGFCLERE   96 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v-~~~~~~a~k~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~i--~~l~~~~~~~~   96 (146)
                      .+.+.+..|.|....| ..+..+++|.....+             ......+.+|+.++..+.++++  +..++......
T Consensus        36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            3444455666666666 456788888875321             0123457789999999987764  55555543322


Q ss_pred             ----ceeEEEEecCC-CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccC
Q 048150           97 ----EKILVYEYVPN-KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLF  145 (146)
Q Consensus        97 ----~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~  145 (146)
                          ..++++|++++ .+|.+++..    ..++.....+++..+..-...+++|
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~~~~~i~~~l~~lH~~GI~H  165 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQE----APLSEEQWQAIGQLIARFHDAGVYH  165 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHCCCCC
Confidence                23599999997 689888854    2345554444444444444445555

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.86  E-value=3.6e-05  Score=60.66  Aligned_cols=108  Identities=19%  Similarity=0.209  Sum_probs=73.7

Q ss_pred             HHHccCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC---CCCeeeEeeEEEcCCcee
Q 048150           28 EDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ---HINLVRLLGFCLEREEKI   99 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~l~~~~~~~~~~~   99 (146)
                      ......|.+...+|+|+||.|     .+|..+|+|.-++.....   |..-..++.+++   -+.+..+..+....+.-.
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~  770 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNASV  770 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence            344566888999999999998     457889999976543322   111122333333   123444445555667778


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+++|.+.|+|.+++.   ....+++...+.++.|++.-+..
T Consensus       771 lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~  809 (974)
T KOG1166|consen  771 LVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEH  809 (974)
T ss_pred             eeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHH
Confidence            9999999999999995   34557888888888887766543

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.59  E-value=0.00066  Score=43.69  Aligned_cols=96  Identities=11%  Similarity=0.136  Sum_probs=53.2

Q ss_pred             ceeecccCceee-----cCCcEEEEEEeccCCccc--HHH----------------------HHHHHHHHhhCCCC--Ce
Q 048150           37 DNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQG--AQE----------------------INNEVVVVAKLQHI--NL   85 (146)
Q Consensus        37 ~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~--~~~----------------------~~~e~~~l~~l~h~--~i   85 (146)
                      .+.||+|+||.|     ..+..+++|++.......  ...                      ...|...+..+.+.  .+
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            467999999988     357889999986532111  111                      12444455554332  23


Q ss_pred             eeEeeEEEcCCceeEEEEecCCCCHHH-hhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           86 VRLLGFCLEREEKILVYEYVPNKRLDN-FLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        86 ~~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++.+++    ...++++||++++++.. .+..  ..  .. .....++.+++.++.+
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~--~~--~~-~~~~~~~~~~~~~l~~  129 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKD--VR--LL-EDPEELYDQILELMRK  129 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhh--hh--hc-ccHHHHHHHHHHHHHH
Confidence            333332    34689999999955432 1111  00  11 3456666677666654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.55  E-value=0.00098  Score=43.86  Aligned_cols=100  Identities=15%  Similarity=0.238  Sum_probs=67.2

Q ss_pred             eeecccCceee-----cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCC--CCeeeEeeEEEcC---CceeEEEEecC
Q 048150           38 NKLGEGGFGVL-----PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQH--INLVRLLGFCLER---EEKILVYEYVP  106 (146)
Q Consensus        38 ~~lg~g~fg~v-----~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h--~~i~~l~~~~~~~---~~~~lv~e~~~  106 (146)
                      +.++.|..+.+     ..|..+++|....... .....+..|+.++..+.+  ..+++++......   +..++++||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            45677777665     2246888998754322 134567889988888865  3356666655443   25689999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +.++.+.+..    ..++......++.++++.|..
T Consensus        84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~  114 (223)
T cd05154          84 GRVLRDRLLR----PELSPEERRALARALADTLAA  114 (223)
T ss_pred             CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHH
Confidence            9888765521    236677778888888888853

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=97.53  E-value=0.00049  Score=50.94  Aligned_cols=96  Identities=20%  Similarity=0.219  Sum_probs=69.0

Q ss_pred             cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc----CCceeEEEEecCC-CCHHHhhcCC------
Q 048150           49 PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLE----REEKILVYEYVPN-KRLDNFLYEP------  117 (146)
Q Consensus        49 ~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~----~~~~~lv~e~~~~-g~L~~~l~~~------  117 (146)
                      ..|..+++|++.............-+...+++.|+|++++.+++..    +..+.+|++|.++ ++|.++.-..      
T Consensus       299 ~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~  378 (655)
T KOG3741|consen  299 VDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKR  378 (655)
T ss_pred             cCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccc
Confidence            5677889999854433334444555667888999999999998873    4468999999876 6777755321      


Q ss_pred             ------CCCCCCChHHHHHHHHHHHHHHhhhccCC
Q 048150          118 ------EKQGQWDCSRRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus       118 ------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~  146 (146)
                            ..+...++..++.++.|+..||.  +|||
T Consensus       379 ~n~~~~~~~~~~~e~~lW~y~~QLtaaL~--sIHs  411 (655)
T KOG3741|consen  379 TNSFYPSQNLKAPEEVLWSYISQLTAALY--SIHS  411 (655)
T ss_pred             cccccccCCCCchHHHHHHHHHHHHHHHH--HHHh
Confidence                  12344678899999999999985  5554

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=97.48  E-value=0.00013  Score=50.54  Aligned_cols=104  Identities=20%  Similarity=0.247  Sum_probs=75.7

Q ss_pred             cCcccceeecccCceee-----cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC------ce
Q 048150           32 NKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLERE------EK   98 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~------~~   98 (146)
                      .+|.....+|.|+=..+     -.+.++++|.....  .....+...+|..++..+.|+|++++..++....      ..
T Consensus        17 ~Ry~nL~p~~~g~~~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~   96 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQIVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV   96 (369)
T ss_pred             eeeeeecccCCCCceEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence            44556666776665333     45667888876533  2223566789999999999999999999886543      37


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ++|||++.. +|.+.+.-     .++=..+..++.|.+.|..|
T Consensus        97 y~v~e~m~~-nl~~vi~~-----elDH~tis~i~yq~~~~ik~  133 (369)
T KOG0665|consen   97 YLVMELMDA-NLCQVILM-----ELDHETISYILYQMLCGIKH  133 (369)
T ss_pred             HHHHHhhhh-HHHHHHHH-----hcchHHHHHHHHHHHHHHHH
Confidence            899999976 88888752     25556788899999998875

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.35  E-value=0.00029  Score=52.76  Aligned_cols=30  Identities=20%  Similarity=0.372  Sum_probs=24.0

Q ss_pred             cCcccceeecccCceee-----cC-CcEEEEEEeccC
Q 048150           32 NKFSTDNKLGEGGFGVL-----PN-EHEIAVKRLSRS   62 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v-----~~-~~~~a~k~~~~~   62 (146)
                      .+|.. +.+|+|++|+|     .. |..||||++++.
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            44665 78999999999     34 899999999754

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=97.19  E-value=0.0021  Score=48.85  Aligned_cols=86  Identities=20%  Similarity=0.076  Sum_probs=64.0

Q ss_pred             cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHH
Q 048150           49 PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRR  128 (146)
Q Consensus        49 ~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~  128 (146)
                      ..+.++.+.........-.....+.+..|+.++||+|+++++.+...+.+|+|+|.+.  .|...+.+      +.....
T Consensus        35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------l~~~~v  106 (690)
T KOG1243|consen   35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------LGKEEV  106 (690)
T ss_pred             ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------hHHHHH
Confidence            3456777777765433234556677888999999999999999999999999999875  46666644      224456


Q ss_pred             HHHHHHHHHHHhhh
Q 048150          129 YKIIGGRGRDCSRN  142 (146)
Q Consensus       129 ~~i~~~i~~~l~~~  142 (146)
                      ...+.||+.+|.|.
T Consensus       107 ~~Gl~qIl~AL~FL  120 (690)
T KOG1243|consen  107 CLGLFQILAALSFL  120 (690)
T ss_pred             HHHHHHHHHHHHHH
Confidence            77788899998753

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.05  E-value=0.0039  Score=45.83  Aligned_cols=26  Identities=23%  Similarity=0.351  Sum_probs=21.6

Q ss_pred             ceeecccCceee-----cCCcEEEEEEeccC
Q 048150           37 DNKLGEGGFGVL-----PNEHEIAVKRLSRS   62 (146)
Q Consensus        37 ~~~lg~g~fg~v-----~~~~~~a~k~~~~~   62 (146)
                      .+.+|.|++|+|     ..|..||||+..+.
T Consensus       122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~  152 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPG  152 (437)
T ss_pred             CcceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence            367999999998     47889999998654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=96.47  E-value=0.0026  Score=47.86  Aligned_cols=98  Identities=17%  Similarity=0.182  Sum_probs=67.5

Q ss_pred             eecccCceee---------cCCcEEEEEEeccCCcc--cHHHHHHHHHHHhhCC-CCCeeeEeeEEEcCCceeEEEEecC
Q 048150           39 KLGEGGFGVL---------PNEHEIAVKRLSRSSSQ--GAQEINNEVVVVAKLQ-HINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        39 ~lg~g~fg~v---------~~~~~~a~k~~~~~~~~--~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      ++|+|.||.|         ..|..+++|++......  .......|-.++..++ |+.+++++..+.++..++++.+|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            3688999987         34556788887543211  1223445666777775 9999999999999999999999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHH
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDC  139 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l  139 (146)
                      +|.+...+.+.   ..++......+...++-++
T Consensus        81 gg~lft~l~~~---~~f~~~~~~~~~aelaLal  110 (612)
T KOG0603|consen   81 GGDLFTRLSKE---VMFDELDVAFYLAELALAL  110 (612)
T ss_pred             cchhhhccccC---CchHHHHHHHHHHHHHHHH
Confidence            99998887652   2344444444444555444

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.41  E-value=0.00058  Score=47.94  Aligned_cols=66  Identities=24%  Similarity=0.288  Sum_probs=51.7

Q ss_pred             hCCCCCeeeEeeEEEcC-----CceeEEEEecCCCCHHHhhcCCC-CCCCCChHHHHHHHHHHHHHHhhhccCC
Q 048150           79 KLQHINLVRLLGFCLER-----EEKILVYEYVPNKRLDNFLYEPE-KQGQWDCSRRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus        79 ~l~h~~i~~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~~~~~~  146 (146)
                      .+.|.||++++.++.+.     ....+++||+..|++.++|+... ....+......+++.||..||.  ||||
T Consensus       123 qlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~--yLhs  194 (458)
T KOG1266|consen  123 QLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALS--YLHS  194 (458)
T ss_pred             HHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh--hhhc
Confidence            45688999999888653     34678999999999999998643 3445777888899999999996  5554

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.03  E-value=0.007  Score=45.15  Aligned_cols=113  Identities=17%  Similarity=0.129  Sum_probs=74.9

Q ss_pred             HHccCcccceeecccCceee-------cCCcEEEEEEeccCCcccHHH--HHHHHHHHhhC-CCCCeeeEeeEEEcCCce
Q 048150           29 DATNKFSTDNKLGEGGFGVL-------PNEHEIAVKRLSRSSSQGAQE--INNEVVVVAKL-QHINLVRLLGFCLEREEK   98 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v-------~~~~~~a~k~~~~~~~~~~~~--~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~   98 (146)
                      ....+|..+..||.|.|+.+       ..++.+++|.+..........  -..|+.+...+ .|.+.+.....+......
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~  341 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG  341 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence            34467888999999998866       346678887765332222111  12344444444 577777777777666777


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccCC
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~  146 (146)
                      ++-.|||.+++....+.   -...++....+.+..+++.++  ++||+
T Consensus       342 ~ip~e~~~~~s~~l~~~---~~~~~d~~~~~~~~~q~~~~l--~~i~s  384 (524)
T KOG0601|consen  342 YIPLEFCEGGSSSLRSV---TSQMLDEDPRLRLTAQILTAL--NVIHS  384 (524)
T ss_pred             cCchhhhcCcchhhhhH---HHHhcCcchhhhhHHHHHhcc--ccccc
Confidence            79999999998776652   122366777888888888777  56664

>cd05151 ChoK Choline Kinase (ChoK)

Probab=95.66  E-value=0.13  Score=32.36  Aligned_cols=72  Identities=15%  Similarity=0.111  Sum_probs=45.0

Q ss_pred             eeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCe-eeEeeEEEcCCceeEEEEecCCCCHHH
Q 048150           38 NKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINL-VRLLGFCLEREEKILVYEYVPNKRLDN  112 (146)
Q Consensus        38 ~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~l~~~~~~~~~~~lv~e~~~~g~L~~  112 (146)
                      +.++.|..+.+    ..+..+++|....... ....+..|+..+..+.+..+ +.++...  ....+++|||+++.++..
T Consensus         4 ~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~   80 (170)
T cd05151           4 SPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLT   80 (170)
T ss_pred             eecCCcccCceEEEEECCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccc
Confidence            45677777766    3567899998753321 12335678888877754433 3444433  233579999999987654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=95.31  E-value=0.055  Score=35.09  Aligned_cols=74  Identities=18%  Similarity=0.298  Sum_probs=53.3

Q ss_pred             ccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCee-eEeeEEEcCCceeEEEEecCCCC
Q 048150           35 STDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLV-RLLGFCLEREEKILVYEYVPNKR  109 (146)
Q Consensus        35 ~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~l~~~~~~~~~~~lv~e~~~~g~  109 (146)
                      .....|++|.++.|    +.|..+++|.....  .....+..|+.++..+...++. .++.+    +..++.|||+.|..
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~y----g~~~i~me~i~G~~   98 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWRGGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFY----GEDFIRMEYIDGRP   98 (201)
T ss_pred             hhhhhhhcccccEEEEeeccCceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEe----chhhhhhhhhcCcc
Confidence            45678899999998    56678899987532  3467788999999988766654 34443    22345699999988


Q ss_pred             HHHhh
Q 048150          110 LDNFL  114 (146)
Q Consensus       110 L~~~l  114 (146)
                      |.+..
T Consensus        99 L~~~~  103 (201)
T COG2112          99 LGKLE  103 (201)
T ss_pred             hhhhh
Confidence            87765

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.23  E-value=0.5  Score=30.97  Aligned_cols=100  Identities=13%  Similarity=0.131  Sum_probs=58.8

Q ss_pred             ecccCceee----cCCcEEEEEEeccCCc---cc-----HHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           40 LGEGGFGVL----PNEHEIAVKRLSRSSS---QG-----AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        40 lg~g~fg~v----~~~~~~a~k~~~~~~~---~~-----~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +++|+=+.+    +.|..+.+|.-.+...   ..     ...-.+|++++..+.-..+....=+..+++.-.++|||+++
T Consensus         4 i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G   83 (204)
T COG3642           4 IKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEG   83 (204)
T ss_pred             hhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCC
Confidence            455555555    3355566665422211   11     23457899998887544444333344567777899999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccC
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLF  145 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~  145 (146)
                      ..|.+.+...      .......+-..++.-..-.++|
T Consensus        84 ~~lkd~l~~~------~~~~~r~vG~~vg~lH~~givH  115 (204)
T COG3642          84 ELLKDALEEA------RPDLLREVGRLVGKLHKAGIVH  115 (204)
T ss_pred             hhHHHHHHhc------chHHHHHHHHHHHHHHhcCeec
Confidence            9998888542      2334555666565544445555

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=95.21  E-value=0.47  Score=31.26  Aligned_cols=101  Identities=17%  Similarity=0.238  Sum_probs=65.6

Q ss_pred             ceeecccCceee---cCCcEEEEEEeccCC----------------cccHHHHHHHHHHHhhC------CCCCeeeEeeE
Q 048150           37 DNKLGEGGFGVL---PNEHEIAVKRLSRSS----------------SQGAQEINNEVVVVAKL------QHINLVRLLGF   91 (146)
Q Consensus        37 ~~~lg~g~fg~v---~~~~~~a~k~~~~~~----------------~~~~~~~~~e~~~l~~l------~h~~i~~l~~~   91 (146)
                      ...||+|+.-.+   +.....++|+.....                ........+|+.-...+      .+.++..++|.
T Consensus         6 ~~~i~~G~~R~cy~HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~   85 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYGF   85 (199)
T ss_pred             CcccccCCCceEEECCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeEE
Confidence            456788888776   556678889886544                11123344555443333      36788999999


Q ss_pred             EEcCCceeEEEEecC------CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           92 CLEREEKILVYEYVP------NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        92 ~~~~~~~~lv~e~~~------~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..++..+.+|+|.+.      ..+|.+++.+    ..++. .....+.++.+.|.-+
T Consensus        86 veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~----~~~~~-~~~~~L~~f~~~l~~~  137 (199)
T PF10707_consen   86 VETNLGLGLVVELIRDADGNISPTLEDYLKE----GGLTE-ELRQALDEFKRYLLDH  137 (199)
T ss_pred             EecCCceEEEEEEEECCCCCcCccHHHHHHc----CCccH-HHHHHHHHHHHHHHHc
Confidence            999999999999763      3357777743    22444 5666666666666443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PLN00181 protein SPA1-RELATED; Provisional

Probab=95.04  E-value=0.012  Score=46.42  Aligned_cols=44  Identities=11%  Similarity=0.137  Sum_probs=34.5

Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..+.+++|++ +++|.+++...  ...+++..+..++.||++||.|.
T Consensus        53 ~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~l   96 (793)
T PLN00181         53 DSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAA   96 (793)
T ss_pred             chhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHH
Confidence            3466778876 45999999642  34489999999999999999763

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=94.85  E-value=0.008  Score=45.98  Aligned_cols=70  Identities=19%  Similarity=0.198  Sum_probs=50.3

Q ss_pred             HHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150           70 INNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        70 ~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      +..|..+-..+.|++++.....+.......-.||||++ +|..++...   ..+....+..+.+|+..|+.|.+
T Consensus       368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h  437 (601)
T KOG0590|consen  368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLH  437 (601)
T ss_pred             hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHH
Confidence            44555566678899987665555444444445999999 999988642   34666778899999999997644

>PLN02876 acyl-CoA dehydrogenase

Probab=94.14  E-value=0.92  Score=36.45  Aligned_cols=100  Identities=16%  Similarity=0.244  Sum_probs=59.5

Q ss_pred             ceeecccCceee-----cCC---cEEEEEEeccCC-cccHHHHHHHHHHHhhCC-CCCe--eeEeeEEEcC---CceeEE
Q 048150           37 DNKLGEGGFGVL-----PNE---HEIAVKRLSRSS-SQGAQEINNEVVVVAKLQ-HINL--VRLLGFCLER---EEKILV  101 (146)
Q Consensus        37 ~~~lg~g~fg~v-----~~~---~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i--~~l~~~~~~~---~~~~lv  101 (146)
                      ...++.|..+.+     ..+   ..+.+|...... ......+.+|.+++..+. |.++  ++++..+.+.   +..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            456677766543     121   345666653321 123456789999999885 5554  6666666543   457899


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |||+++..+.+.     ....++......+..++++.|..
T Consensus       123 ME~v~G~~~~~~-----~~~~~~~~~r~~l~~~l~~~La~  157 (822)
T PLN02876        123 MEYLEGRIFVDP-----KLPGVAPERRRAIYRATAKVLAA  157 (822)
T ss_pred             EEecCCcccCCc-----cCCCCCHHHHHHHHHHHHHHHHH
Confidence            999998543221     11123455566777777777753

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=93.99  E-value=0.018  Score=44.15  Aligned_cols=113  Identities=18%  Similarity=0.229  Sum_probs=76.6

Q ss_pred             HccCcccceeecccCceee-------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCC-CCCeeeEeeEEEcCCcee
Q 048150           30 ATNKFSTDNKLGEGGFGVL-------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQ-HINLVRLLGFCLEREEKI   99 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v-------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~~~~   99 (146)
                      +...|.....+|+|+|+.+       .....++++.+....  .........|..+-..+. |.|++.+.+....+...+
T Consensus        18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~   97 (601)
T KOG0590|consen   18 PNSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL   97 (601)
T ss_pred             ccccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence            3556777778999999987       122345555554332  111233345666666665 999999999998999999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      +.+++..++++.+.+..... ...+....-.+..|+..++.|.+
T Consensus        98 ~~~~~s~g~~~f~~i~~~~~-~~~~~~~~~~~~~ql~s~l~~~H  140 (601)
T KOG0590|consen   98 LSLSYSDGGSLFSKISHPDS-TGTSSSSASRYLPQLNSGLSYLH  140 (601)
T ss_pred             cccCcccccccccccccCCc-cCCCCcchhhhhhhhccCccccC
Confidence            99999999999888732111 13455567778888888886544

>PRK10593 hypothetical protein; Provisional

Probab=93.48  E-value=1.6  Score=30.63  Aligned_cols=78  Identities=12%  Similarity=0.113  Sum_probs=52.3

Q ss_pred             CcccceeecccCceeec----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCC---CCeeeEeeEEEc---CCceeEEE
Q 048150           33 KFSTDNKLGEGGFGVLP----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQH---INLVRLLGFCLE---REEKILVY  102 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v~----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~l~~~~~~---~~~~~lv~  102 (146)
                      .......||.|..+.|+    .+..+.+|..+.  ......+..|+..+..+..   ..++++++.+..   .+..+++|
T Consensus        15 ~~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm   92 (297)
T PRK10593         15 KLSRVECISEQPYAALWALYDSQGNPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL   92 (297)
T ss_pred             hhheeeecCCccceeEEEEEcCCCCEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence            34456778999998872    233456666432  1134578889988887743   356677776643   35589999


Q ss_pred             EecCCCCHHH
Q 048150          103 EYVPNKRLDN  112 (146)
Q Consensus       103 e~~~~g~L~~  112 (146)
                      |+++++++.+
T Consensus        93 E~i~G~~~~~  102 (297)
T PRK10593         93 ERLRGVSVEA  102 (297)
T ss_pred             eccCCEecCC
Confidence            9999987765

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=93.39  E-value=1.6  Score=29.29  Aligned_cols=70  Identities=20%  Similarity=0.230  Sum_probs=47.0

Q ss_pred             eeecccCceeecC--CcEEEEEEeccCCcccHHHHHHHHHHHhhCCCC--CeeeEeeEEEcCCceeEEEEecCCCC
Q 048150           38 NKLGEGGFGVLPN--EHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHI--NLVRLLGFCLEREEKILVYEYVPNKR  109 (146)
Q Consensus        38 ~~lg~g~fg~v~~--~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~--~i~~l~~~~~~~~~~~lv~e~~~~g~  109 (146)
                      ..+|+|.-+.|+.  +..+.+|.....  .......+|.+++..+..-  .++..+......+...++||+++|.+
T Consensus         7 ~~i~~G~t~~~y~~~~~~~VlR~~~~~--~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172         7 TQTGEGGNGESYTHKTGKWMLKLYNPG--FDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             eeecCCCCcceeEecCCCEEEEeCCCC--CCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            4567787777743  456667776432  1344567888888877433  34566777666677789999999963

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=93.20  E-value=0.077  Score=43.48  Aligned_cols=45  Identities=7%  Similarity=0.008  Sum_probs=35.0

Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      -.+||.||||+..++.++++++...  -.....+.++++|++||+|.
T Consensus       669 ~~LYIQMEyCE~~ll~~iI~~N~~~--~~~d~~wrLFreIlEGLaYI  713 (1351)
T KOG1035|consen  669 LILYIQMEYCEKTLLRDIIRRNHFN--SQRDEAWRLFREILEGLAYI  713 (1351)
T ss_pred             eEEEEEHhhhhhhHHHHHHHhcccc--hhhHHHHHHHHHHHHHHHHH
Confidence            3488999999998888888653222  15677999999999999763

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=93.19  E-value=1.6  Score=28.83  Aligned_cols=90  Identities=9%  Similarity=0.102  Sum_probs=53.9

Q ss_pred             cceeecccCceee----cCCcEEEEEEeccCCc--c------cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           36 TDNKLGEGGFGVL----PNEHEIAVKRLSRSSS--Q------GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        36 ~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~--~------~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ....+-+|+=+.|    ..|....+|.-.+...  .      .......|++++.++.--.|.-..=++.+.+.-.+.||
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME   90 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME   90 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence            3556677777766    5666767776432211  0      13456788888887754444333334455666679999


Q ss_pred             ecCC-CCHHHhhcCCCCCCCCCh
Q 048150          104 YVPN-KRLDNFLYEPEKQGQWDC  125 (146)
Q Consensus       104 ~~~~-g~L~~~l~~~~~~~~~~~  125 (146)
                      |+++ .++.+++.........+.
T Consensus        91 ~~~g~~~vk~~i~~~~~~~~~d~  113 (229)
T KOG3087|consen   91 FIDGASTVKDFILSTMEDESEDE  113 (229)
T ss_pred             eccchhHHHHHHHHHccCcccch
Confidence            9987 567888875443433333

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=93.00  E-value=0.042  Score=44.74  Aligned_cols=103  Identities=17%  Similarity=0.103  Sum_probs=69.7

Q ss_pred             CcccceeecccCceee----cCCcEEEEEEeccCCcc-cHHHH---HHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           33 KFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQ-GAQEI---NNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~-~~~~~---~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++..++.||.+.|=++    .....+.+|++-..++. ....+   ..+++ ...+++||.+++-..-....-.++|-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            6888999999999887    22234888988544322 23333   34444 5556899988876665566667888888


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCS  140 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~  140 (146)
                      +.+ +|++.+..   ++.+..-+..-++.|+..|+.
T Consensus       103 vkh-nLyDRlST---RPFL~~iEKkWiaFQLL~al~  134 (1431)
T KOG1240|consen  103 VKH-NLYDRLST---RPFLVLIEKKWIAFQLLKALS  134 (1431)
T ss_pred             Hhh-hhhhhhcc---chHHHHHHHHHHHHHHHHHHH
Confidence            877 89999864   333555566667777777664

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=92.17  E-value=0.88  Score=29.64  Aligned_cols=66  Identities=26%  Similarity=0.193  Sum_probs=44.3

Q ss_pred             HHHHHHhhCCC-CCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           72 NEVVVVAKLQH-INLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        72 ~e~~~l~~l~h-~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      .|.-++..+++ +++++++|.|   + -+++.||...+++......-..-...+|..+..++.++++.+.+
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~C---G-~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~   74 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSC---G-RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEE   74 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeEC---C-CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHH
Confidence            56667777765 5889999988   2 35789999877654211000011236899999999998887754

Proteins in this uncharacterised family are described as transmembrane proteins.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=90.79  E-value=3.3  Score=27.14  Aligned_cols=93  Identities=20%  Similarity=0.313  Sum_probs=54.0

Q ss_pred             ceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCC--CeeeEeeEEEc---CCceeEEEEecCC
Q 048150           37 DNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHI--NLVRLLGFCLE---REEKILVYEYVPN  107 (146)
Q Consensus        37 ~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~--~i~~l~~~~~~---~~~~~lv~e~~~~  107 (146)
                      ++.++.|..+.+    ..+..+++|.....  .....+..|..++..+...  .++.++.....   ....+++++++++
T Consensus         2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g   79 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG   79 (239)
T ss_dssp             EEEEEESSSSEEEEEEETTSEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred             CccCCCCCeeeEEEEEECCcEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence            356777777655    33358888886432  3445667777777766322  34555553322   2346899999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCS  140 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~  140 (146)
                      .++..         ..+......++.++++.|.
T Consensus        80 ~~~~~---------~~~~~~~~~~~~~~~~~l~  103 (239)
T PF01636_consen   80 RPLDD---------ELSPEQRPELLRQLGRALA  103 (239)
T ss_dssp             EEHHH---------TSTHHHHHHHHHHHHHHHH
T ss_pred             ccccc---------cccccccccccccchhhhh
Confidence            88776         1233445555555555443

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=90.52  E-value=0.46  Score=35.89  Aligned_cols=105  Identities=16%  Similarity=0.130  Sum_probs=70.2

Q ss_pred             Ccccceeecc--cCceee--------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCcee
Q 048150           33 KFSTDNKLGE--GGFGVL--------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        33 ~~~~~~~lg~--g~fg~v--------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~   99 (146)
                      .+.....+|.  |.+|.+        ..+..+|+|..+..  .+.....-.++......+ .|.+.+..+..+...+.++
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf  194 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF  194 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence            3556677888  999987        23345777774332  222233334555555555 5888888888888999999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHH----HHh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGR----DCS  140 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~----~l~  140 (146)
                      +.+|.+. .+|.++...  ....++...+.....+..+    ||.
T Consensus       195 iqtE~~~-~sl~~~~~~--~~~~~p~~~l~~~~~~~~~~~~~al~  236 (524)
T KOG0601|consen  195 IQTELCG-ESLQSYCHT--PCNFLPDNLLWNSLRDWLSRDVTALS  236 (524)
T ss_pred             eeecccc-chhHHhhhc--ccccCCchhhhhHHhhhhhccccccc
Confidence            9999887 477776654  3334666777777777776    764

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=88.95  E-value=4.3  Score=28.48  Aligned_cols=120  Identities=13%  Similarity=0.124  Sum_probs=72.9

Q ss_pred             cccccChhHHHHHccCcccceeecccCceee-----cCCcEEEEEEeccCC----------------------cccHHHH
Q 048150           18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSS----------------------SQGAQEI   70 (146)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~----------------------~~~~~~~   70 (146)
                      .-..+....+.....=..+.+.||-|.=+.|     ..|.++++|.=+...                      .-.....
T Consensus        77 GyD~LAL~~l~~r~~ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A  156 (304)
T COG0478          77 GYDALALHALVKRGIVEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAA  156 (304)
T ss_pred             chhHHHHHHHHHcChHHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHH
Confidence            3344444555444444567788998888877     457788888732110                      0011234


Q ss_pred             HHHHHHHhhCCCC--CeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhccC
Q 048150           71 NNEVVVVAKLQHI--NLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFLF  145 (146)
Q Consensus        71 ~~e~~~l~~l~h~--~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~  145 (146)
                      .+|...|.++...  .+++.+++    +.=.++||++++-.|...-.    ....+....-.++..+..+...+++|
T Consensus       157 ~rEf~~L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r~----~~en~~~il~~il~~~~~~~~~GiVH  225 (304)
T COG0478         157 EREFEALQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLRL----DVENPDEILDKILEEVRKAYRRGIVH  225 (304)
T ss_pred             HHHHHHHHHhhhcCCCCCCcccc----ccceeeeehcccceeecccC----cccCHHHHHHHHHHHHHHHHHcCccc
Confidence            6778888888543  55555443    44579999999977654321    11123344557777788777878887

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=88.39  E-value=0.14  Score=38.27  Aligned_cols=68  Identities=29%  Similarity=0.513  Sum_probs=51.1

Q ss_pred             HHHHccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEc
Q 048150           27 IEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLE   94 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~   94 (146)
                      ......++....++|.|+|+.|      ..+...+||++...+ ........+++..+...-|++++.+...|..
T Consensus        44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~  118 (516)
T KOG1033|consen   44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYE  118 (516)
T ss_pred             hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceec
Confidence            4555678999999999999998      234468888886543 3346678888888889999999887655543

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=88.04  E-value=5.2  Score=26.37  Aligned_cols=63  Identities=10%  Similarity=0.108  Sum_probs=36.0

Q ss_pred             HHHHHHHHhhCC--CCCeeeEeeEEEcCCceeEEEEecCCCCHHH-hhcCCCCCCCCChHHHHHHHHHHHHHHh
Q 048150           70 INNEVVVVAKLQ--HINLVRLLGFCLEREEKILVYEYVPNKRLDN-FLYEPEKQGQWDCSRRYKIIGGRGRDCS  140 (146)
Q Consensus        70 ~~~e~~~l~~l~--h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~~~~~~~~i~~~i~~~l~  140 (146)
                      ..+|.+.|.++.  .-+++.++..    ..-+++|||+.+..+.. .+.+    ..++......+..+++..|.
T Consensus        73 a~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~  138 (197)
T cd05146          73 AEKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMK  138 (197)
T ss_pred             HHHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHH
Confidence            348898888874  3455565543    44578999998754422 2322    12333344455556655553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=87.83  E-value=6.3  Score=26.42  Aligned_cols=60  Identities=12%  Similarity=0.164  Sum_probs=39.1

Q ss_pred             CcEEEEEEeccCCcccHHHHHHHHHHHhhCC-CCCeeeEeeEEEcCCceeEEEEecCCCCHHHh
Q 048150           51 EHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ-HINLVRLLGFCLEREEKILVYEYVPNKRLDNF  113 (146)
Q Consensus        51 ~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~  113 (146)
                      +..+.+|......   ...+..|+.++..+. +.-+++++......+..+++|++++|.++...
T Consensus        22 ~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150          22 NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence            3466677764321   234567888777763 34455667666555668899999999887654

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=85.78  E-value=2.4  Score=27.66  Aligned_cols=73  Identities=10%  Similarity=0.061  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHhhCCCC--CeeeEeeEEEcCCceeEEEEecC--CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHH-hhh
Q 048150           68 QEINNEVVVVAKLQHI--NLVRLLGFCLEREEKILVYEYVP--NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDC-SRN  142 (146)
Q Consensus        68 ~~~~~e~~~l~~l~h~--~i~~l~~~~~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l-~~~  142 (146)
                      .+..+|.+.|..+...  +++.++.+.    .-.++|||++  +..+..+... .....-.......++.++...+ ..+
T Consensus        53 ~~~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~l~~~-~~~~~~~~~~~~~il~~~~~~~~~~g  127 (188)
T PF01163_consen   53 EWAKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPRLKDV-DLSPEEPKELLEEILEEIIKMLHKAG  127 (188)
T ss_dssp             HHHHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGCHHHC-GGGGSTHHHHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhhHHhc-cccchhHHHHHHHHHHHHHHHHHhcC
Confidence            4567899999998654  455655442    2369999999  6555443322 1111112223334444455554 445


Q ss_pred             ccC
Q 048150          143 FLF  145 (146)
Q Consensus       143 ~~~  145 (146)
                      ++|
T Consensus       128 ivH  130 (188)
T PF01163_consen  128 IVH  130 (188)
T ss_dssp             EEE
T ss_pred             cee
Confidence            565

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=84.87  E-value=1.8  Score=32.02  Aligned_cols=59  Identities=15%  Similarity=0.192  Sum_probs=41.8

Q ss_pred             CCCCCeeeEeeEEEc---------------------------CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHH
Q 048150           80 LQHINLVRLLGFCLE---------------------------REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKII  132 (146)
Q Consensus        80 l~h~~i~~l~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~  132 (146)
                      ..||||+.+.+.|.+                           +..+|+||...+. +|.+++-..    ..+......++
T Consensus       273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~----~~s~r~~~~~l  347 (598)
T KOG4158|consen  273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR----HRSYRTGRVIL  347 (598)
T ss_pred             CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC----CCchHHHHHHH
Confidence            369999988776642                           2237888887766 888887532    24456677888


Q ss_pred             HHHHHHHhhhc
Q 048150          133 GGRGRDCSRNF  143 (146)
Q Consensus       133 ~~i~~~l~~~~  143 (146)
                      .|+++|+.|..
T Consensus       348 aQlLEav~hL~  358 (598)
T KOG4158|consen  348 AQLLEAVTHLH  358 (598)
T ss_pred             HHHHHHHHHHH
Confidence            89999987644

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=83.10  E-value=16  Score=26.98  Aligned_cols=77  Identities=13%  Similarity=0.200  Sum_probs=47.6

Q ss_pred             ceeecccCceee-----cCC-cEEEEEEeccC----C---cccHHHHHHHHHHHhhCC---CCCeeeEeeEEEcCCceeE
Q 048150           37 DNKLGEGGFGVL-----PNE-HEIAVKRLSRS----S---SQGAQEINNEVVVVAKLQ---HINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        37 ~~~lg~g~fg~v-----~~~-~~~a~k~~~~~----~---~~~~~~~~~e~~~l~~l~---h~~i~~l~~~~~~~~~~~l  100 (146)
                      .+.+|.|.+..|     ..| ..+.+|.-.+.    .   +........|...|..+.   ...+++++.+  +.+.-++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l  108 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT  108 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence            357889999877     333 37888875321    1   123456677777777652   2345666654  3455789


Q ss_pred             EEEecCCCC-HHHhhc
Q 048150          101 VYEYVPNKR-LDNFLY  115 (146)
Q Consensus       101 v~e~~~~g~-L~~~l~  115 (146)
                      +||++++.. +.+.+.
T Consensus       109 VME~L~~~~~lr~~Ll  124 (401)
T PRK09550        109 VMEDLSDHKILRKGLI  124 (401)
T ss_pred             EEecCCCccHHHHHHh
Confidence            999998754 444443

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=80.76  E-value=0.22  Score=38.57  Aligned_cols=80  Identities=15%  Similarity=0.077  Sum_probs=51.0

Q ss_pred             HHccCcccceeecccCceeecCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCC-eeeEeeEEEcCCceeEEEEecCC
Q 048150           29 DATNKFSTDNKLGEGGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHIN-LVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      ..+..+......++++++++++-.+.+-|.+...-.........++.+|.+++||| .+..++.+...+..++.++++.+
T Consensus       239 Dk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~  318 (829)
T KOG0576|consen  239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICST  318 (829)
T ss_pred             CCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcC
Confidence            33444445555677888887665555545443221122234456778899999999 55556666666778899999887


Q ss_pred             C
Q 048150          108 K  108 (146)
Q Consensus       108 g  108 (146)
                      +
T Consensus       319 ~  319 (829)
T KOG0576|consen  319 G  319 (829)
T ss_pred             C
Confidence            7

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=80.17  E-value=18  Score=25.45  Aligned_cols=72  Identities=14%  Similarity=0.211  Sum_probs=39.5

Q ss_pred             cccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC---CCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           34 FSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL---QHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l---~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      ......++.|.....    ..+..+.+|.-.   ......+..|..-|..+   ....+++++++....+..+|++||++
T Consensus        19 i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~   95 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLDTDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLE   95 (288)
T ss_dssp             --EEEEE--SSSSEEEEEETTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE---
T ss_pred             eeeeEecCCCChhheEEEECCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeec
Confidence            445566676666654    466788888864   22345667777766666   33456677777776777799999998


Q ss_pred             CC
Q 048150          107 NK  108 (146)
Q Consensus       107 ~g  108 (146)
                      .+
T Consensus        96 ~~   97 (288)
T PF03881_consen   96 MG   97 (288)
T ss_dssp             --
T ss_pred             CC
Confidence            75

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	146
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		7e-15
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		1e-14
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		6e-12
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		7e-12
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-11
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-11
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-11
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-10
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		4e-07
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		4e-07
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		4e-07
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-06
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		3e-05
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		3e-05
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		3e-05
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		3e-05
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		3e-05
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-05
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-05
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		4e-05
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		4e-05
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		4e-05
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		4e-05
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		4e-05
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-05
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		4e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		8e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		9e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		9e-05
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		9e-05
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-04
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		2e-04
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		2e-04
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		2e-04
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-04
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		2e-04
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		2e-04
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-04
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		2e-04
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		3e-04
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		3e-04
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		3e-04
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-04
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		3e-04
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		4e-04
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		4e-04
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		4e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		4e-04
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		4e-04
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		4e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		4e-04
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		4e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		4e-04
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		5e-04
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		5e-04
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		5e-04
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		5e-04
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		5e-04
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		5e-04
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		5e-04
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		5e-04
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		5e-04
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		6e-04
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		7e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 2   YNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGV-----LPNEHEIAV 56
           ++V AE++ +  +  L+  +F    ++ A++ FS  N LG GGFG      L +   +AV
Sbjct: 10  FDVPAEEDPEVHLGQLK--RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAV 67
Query: 57  KRLSRSSSQGAQ-EINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
           KRL     QG + +   EV +++   H NL+RL GFC+   E++LVY Y+ N  + + L 
Sbjct: 68  KRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR 127
Query: 116 E-PEKQGQWDCSRRYKIIGGRGR 137
           E PE Q   D  +R +I  G  R
Sbjct: 128 ERPESQPPLDWPKRQRIALGSAR 150

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 2   YNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGV-----LPNEHEIAV 56
           ++V AE++ +  +  L+  +F    ++ A++ F   N LG GGFG      L +   +AV
Sbjct: 2   FDVPAEEDPEVHLGQLK--RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAV 59
Query: 57  KRLSRSSSQGAQ-EINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
           KRL    +QG + +   EV +++   H NL+RL GFC+   E++LVY Y+ N  + + L 
Sbjct: 60  KRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR 119
Query: 116 E-PEKQGQWDCSRRYKIIGGRGR 137
           E PE Q   D  +R +I  G  R
Sbjct: 120 ERPESQPPLDWPKRQRIALGSAR 142

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 3   NVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVK 57
           N + +  + + +   ES +     +E+ATN F     +G G FG     VL +  ++A+K
Sbjct: 10  NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69
Query: 58  RLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE- 116
           R +  SSQG +E   E+  ++  +H +LV L+GFC ER E IL+Y+Y+ N  L   LY  
Sbjct: 70  RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 117 --PEKQGQWDCSRRYKIIGGRGR 137
             P     W+  +R +I  G  R
Sbjct: 130 DLPTMSMSWE--QRLEICIGAAR 150

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 3   NVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVK 57
           N + +  + + +   ES +     +E+ATN F     +G G FG     VL +  ++A+K
Sbjct: 10  NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69
Query: 58  RLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE- 116
           R +  SSQG +E   E+  ++  +H +LV L+GFC ER E IL+Y+Y+ N  L   LY  
Sbjct: 70  RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 117 --PEKQGQWDCSRRYKIIGGRGR 137
             P     W+  +R +I  G  R
Sbjct: 130 DLPTMSMSWE--QRLEICIGAAR 150

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 14/103 (13%)
Query: 22  FDFETIEDATNKFST------DNKLGEGGFGVL----PNEHEIAVKRLSR----SSSQGA 67
           F F  +++ TN F         NK+GEGGFGV+     N   +AVK+L+     ++ +  
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 68  QEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
           Q+ + E+ V+AK QH NLV LLGF  + ++  LVY Y+PN  L
Sbjct: 75  QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 14/103 (13%)
Query: 22  FDFETIEDATNKFST------DNKLGEGGFGVL----PNEHEIAVKRLSR----SSSQGA 67
           F F  +++ TN F         NK+GEGGFGV+     N   +AVK+L+     ++ +  
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 68  QEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
           Q+ + E+ V+AK QH NLV LLGF  + ++  LVY Y+PN  L
Sbjct: 75  QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 14/103 (13%)
Query: 22  FDFETIEDATNKFST------DNKLGEGGFGVL----PNEHEIAVKRLSR----SSSQGA 67
           F F  +++ TN F         NK+GEGGFGV+     N   +AVK+L+     ++ +  
Sbjct: 9   FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 68  QEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
           Q+ + E+ V+AK QH NLV LLGF  + ++  LVY Y+PN  L
Sbjct: 69  QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 111

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 22  FDFETIEDATNKFST------DNKLGEGGFGVL----PNEHEIAVKRLSR----SSSQGA 67
           F F  +++ TN F         NK GEGGFGV+     N   +AVK+L+     ++ +  
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 68  QEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
           Q+ + E+ V AK QH NLV LLGF  + ++  LVY Y PN  L
Sbjct: 66  QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL 108

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 39  KLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
           +LGEG FG         +LP + +  +AVK L  +S    Q+   E  ++  LQH ++VR
Sbjct: 48  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
             G C E    ++V+EY+ +  L+ FL
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFL 134

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 39  KLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
           +LGEG FG         +LP + +  +AVK L  +S    Q+   E  ++  LQH ++VR
Sbjct: 25  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
             G C E    ++V+EY+ +  L+ FL
Sbjct: 85  FFGVCTEGRPLLMVFEYMRHGDLNRFL 111

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 39  KLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
           +LGEG FG         +LP + +  +AVK L  +S    Q+   E  ++  LQH ++VR
Sbjct: 19  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
             G C E    ++V+EY+ +  L+ FL
Sbjct: 79  FFGVCTEGRPLLMVFEYMRHGDLNRFL 105

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 39  KLGEGGFG---------VLPNEHEI--AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
           +LGEG FG         + P + +I  AVK L  +S    ++ + E  ++  LQH ++V+
Sbjct: 20  ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
             G C+E +  I+V+EY+ +  L+ FL
Sbjct: 80  FYGVCVEGDPLIMVFEYMKHGDLNKFL 106

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 38  NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            ++G G FG++      N+ ++A+K + R  +   ++   E  V+ KL H  LV+L G C
Sbjct: 16  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 93  LEREEKILVYEYVPNKRLDNFL 114
           LE+    LV+E++ +  L ++L
Sbjct: 75  LEQAPICLVFEFMEHGCLSDYL 96

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 38  NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            ++G G FG++      N+ ++A+K + R  +   ++   E  V+ KL H  LV+L G C
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 93  LEREEKILVYEYVPNKRLDNFL 114
           LE+    LV+E++ +  L ++L
Sbjct: 72  LEQAPICLVFEFMEHGCLSDYL 93

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 38  NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            ++G G FG++      N+ ++A+K + R  +   ++   E  V+ KL H  LV+L G C
Sbjct: 11  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 93  LEREEKILVYEYVPNKRLDNFL 114
           LE+    LV+E++ +  L ++L
Sbjct: 70  LEQAPICLVFEFMEHGCLSDYL 91

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 38  NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            ++G G FG++      N+ ++A+K + R  +   ++   E  V+ KL H  LV+L G C
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 93  LEREEKILVYEYVPNKRLDNFL 114
           LE+    LV+E++ +  L ++L
Sbjct: 72  LEQAPICLVFEFMEHGCLSDYL 93

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29  DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
           DATN  S D  +G G FG        LP++ EI  A+K L    ++  + +   E  ++ 
Sbjct: 31  DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 89
Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +  H N++RL G   + +  ++V EY+ N  LD+FL + + Q
Sbjct: 90  QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 131

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29  DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
           DATN  S D  +G G FG        LP++ EI  A+K L    ++  + +   E  ++ 
Sbjct: 43  DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +  H N++RL G   + +  ++V EY+ N  LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29  DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
           DATN  S D  +G G FG        LP++ EI  A+K L    ++  + +   E  ++ 
Sbjct: 43  DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +  H N++RL G   + +  ++V EY+ N  LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29  DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
           DATN  S D  +G G FG        LP++ EI  A+K L    ++  + +   E  ++ 
Sbjct: 14  DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +  H N++RL G   + +  ++V EY+ N  LD+FL + + Q
Sbjct: 73  QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 114

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29  DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
           DATN  S D  +G G FG        LP++ EI  A+K L    ++  + +   E  ++ 
Sbjct: 43  DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +  H N++RL G   + +  ++V EY+ N  LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29  DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
           DATN  S D  +G G FG        LP++ EI  A+K L    ++  + +   E  ++ 
Sbjct: 43  DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +  H N++RL G   + +  ++V EY+ N  LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29  DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
           DATN  S D  +G G FG        LP++ EI  A+K L    ++  + +   E  ++ 
Sbjct: 43  DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +  H N++RL G   + +  ++V EY+ N  LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29  DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
           DATN  S D  +G G FG        LP++ EI  A+K L    ++  + +   E  ++ 
Sbjct: 43  DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +  H N++RL G   + +  ++V EY+ N  LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29  DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
           DATN  S D  +G G FG        LP++ EI  A+K L    ++  + +   E  ++ 
Sbjct: 43  DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +  H N++RL G   + +  ++V EY+ N  LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29  DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
           DATN  S D  +G G FG        LP++ EI  A+K L    ++  + +   E  ++ 
Sbjct: 41  DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 99
Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +  H N++RL G   + +  ++V EY+ N  LD+FL + + Q
Sbjct: 100 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 141

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 38  NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            ++G G FG++      N+ ++A+K + +  S    +   E  V+ KL H  LV+L G C
Sbjct: 33  QEIGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 93  LEREEKILVYEYVPNKRLDNFL 114
           LE+    LV+E++ +  L ++L
Sbjct: 92  LEQAPICLVFEFMEHGCLSDYL 113

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 30  ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGA-------QEINNEVVV 76
           A N+   + ++G+GGFG++       ++  +A+K L    S+G        QE   EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 77  VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRR 128
           ++ L H N+V+L G  L      +V E+VP   L + L +     +W    R
Sbjct: 77  MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR 126

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 30  ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGA-------QEINNEVVV 76
           A N+   + ++G+GGFG++       ++  +A+K L    S+G        QE   EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 77  VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRR 128
           ++ L H N+V+L G  L      +V E+VP   L + L +     +W    R
Sbjct: 77  MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR 126

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 30  ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGA-------QEINNEVVV 76
           A N+   + ++G+GGFG++       ++  +A+K L    S+G        QE   EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 77  VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRR 128
           ++ L H N+V+L G  L      +V E+VP   L + L +     +W    R
Sbjct: 77  MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR 126

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 38  NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            ++G G FG++      N+ ++A+K + R  +   ++   E  V+ KL H  LV+L G C
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 93  LEREEKILVYEYVPNKRLDNFL 114
           LE+    LV E++ +  L ++L
Sbjct: 73  LEQAPICLVTEFMEHGCLSDYL 94

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 38  NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            +LG G FGV+       ++++A+K + +  S    E   E  V+  L H  LV+L G C
Sbjct: 21  KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 93  LEREEKILVYEYVPNKRLDNFLYE 116
            ++    ++ EY+ N  L N+L E
Sbjct: 80  TKQRPIFIITEYMANGCLLNYLRE 103

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 38  NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            +LG G FGV+       ++++A+K + +  S    E   E  V+  L H  LV+L G C
Sbjct: 30  KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 93  LEREEKILVYEYVPNKRLDNFLYE 116
            ++    ++ EY+ N  L N+L E
Sbjct: 89  TKQRPIFIITEYMANGCLLNYLRE 112

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 38  NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            +LG G FGV+       ++++A+K + +  S    E   E  V+  L H  LV+L G C
Sbjct: 15  KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 93  LEREEKILVYEYVPNKRLDNFLYE 116
            ++    ++ EY+ N  L N+L E
Sbjct: 74  TKQRPIFIITEYMANGCLLNYLRE 97

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 38  NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            +LG G FGV+       ++++A+K + +  S    E   E  V+  L H  LV+L G C
Sbjct: 15  KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 93  LEREEKILVYEYVPNKRLDNFLYE 116
            ++    ++ EY+ N  L N+L E
Sbjct: 74  TKQRPIFIITEYMANGCLLNYLRE 97

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 38  NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            +LG G FGV+       ++++A+K + +  S    E   E  V+  L H  LV+L G C
Sbjct: 30  KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 93  LEREEKILVYEYVPNKRLDNFLYE 116
            ++    ++ EY+ N  L N+L E
Sbjct: 89  TKQRPIFIITEYMANGCLLNYLRE 112

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 38  NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            +LG G FGV+       ++++A+K + +  S    E   E  V+  L H  LV+L G C
Sbjct: 14  KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 93  LEREEKILVYEYVPNKRLDNFLYE 116
            ++    ++ EY+ N  L N+L E
Sbjct: 73  TKQRPIFIITEYMANGCLLNYLRE 96

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 38  NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            +LG G FGV+       ++++A+K + +  S    E   E  V+  L H  LV+L G C
Sbjct: 10  KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 93  LEREEKILVYEYVPNKRLDNFLYE 116
            ++    ++ EY+ N  L N+L E
Sbjct: 69  TKQRPIFIITEYMANGCLLNYLRE 92

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 40  LGEGGFG---------VLPNEH--EIAVKRLSRSSSQGAQ-EINNEVVVVAKLQHINLVR 87
           +GEG FG         +LP E    +AVK L   +S   Q +   E  ++A+  + N+V+
Sbjct: 55  IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
           LLG C   +   L++EY+    L+ FL
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFL 141

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 39  KLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
           +LGEG FG         + P + +  +AVK L   +    ++   E  ++  LQH ++V+
Sbjct: 22  ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFL 114
             G C + +  I+V+EY+ +  L+ FL
Sbjct: 82  FYGVCGDGDPLIMVFEYMKHGDLNKFL 108

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 38  NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            +LG G FGV+       ++++AVK + +  S    E   E   + KL H  LV+  G C
Sbjct: 14  KELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 93  LEREEKILVYEYVPNKRLDNFL 114
            +     +V EY+ N  L N+L
Sbjct: 73  SKEYPIYIVTEYISNGCLLNYL 94

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 29  DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
           DATN  S D  +G G FG        LP++ EI  A+K L    ++  + +   E  ++ 
Sbjct: 14  DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +  H N++RL G   + +  ++V E + N  LD+FL + + Q
Sbjct: 73  QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ 114

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 29  DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
           DATN  S D  +G G FG        LP++ EI  A+K L    ++  + +   E  ++ 
Sbjct: 43  DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +  H N++RL G   + +  ++V E + N  LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ 143

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 29  DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
           DATN  S D  +G G FG        LP++ EI  A+K L    ++  + +   E  ++ 
Sbjct: 43  DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +  H N++RL G   + +  ++V E + N  LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ 143

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 24  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 84  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 111

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 22  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 82  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 109

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 48  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 135

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 18  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 78  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 105

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 80  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 107

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 23  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 83  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 110

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 80  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 107

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 15  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 75  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 102

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 21  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 81  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 108

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 16  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 76  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 103

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 10  ADNDITTLESLQF----DFETIEDATNKFSTDNKLGEGGFGVLPNEH----EIAVKRLSR 61
           +D DI T E+L F    D + ++      +   K+G G FG +        ++AVK L  
Sbjct: 11  SDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILME 70
Query: 62  SS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK 119
               ++   E   EV ++ +L+H N+V  +G   +     +V EY+    L   L++   
Sbjct: 71  QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130
Query: 120 QGQWDCSRRYKI 131
           + Q D  RR  +
Sbjct: 131 REQLDERRRLSM 142

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 35  STDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +  +KLG G +G +           +AVK L   + +  +E   E  V+ +++H NLV+L
Sbjct: 35  TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQL 93
Query: 89  LGFCLEREEKILVYEYVPNKRLDNFLYE 116
           LG C       +V EY+P   L ++L E
Sbjct: 94  LGVCTLEPPFYIVTEYMPYGNLLDYLRE 121

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 35  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 95  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 122

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 10  ADNDITTLESLQF----DFETIEDATNKFSTDNKLGEGGFGVLPNEH----EIAVKRLSR 61
           +D DI T E+L F    D + ++      +   K+G G FG +        ++AVK L  
Sbjct: 11  SDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILME 70
Query: 62  SS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK 119
               ++   E   EV ++ +L+H N+V  +G   +     +V EY+    L   L++   
Sbjct: 71  QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130
Query: 120 QGQWDCSRRYKI 131
           + Q D  RR  +
Sbjct: 131 REQLDERRRLSM 142

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39  KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           +LG+G FG +          N  E+ AVK+L  S+ +  ++   E+ ++  LQH N+V+ 
Sbjct: 35  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 89  LGFCLE--REEKILVYEYVPNKRLDNFL 114
            G C    R    L+ EY+P   L ++L
Sbjct: 95  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 122

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 40  LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
           LG G FG +           P+  ++AVK L    S Q   +   E ++++KL H N+VR
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
            +G  L+   + ++ E +    L +FL E
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRE 127

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 40  LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
           LG G FG +           P+  ++AVK L    S Q   +   E ++++KL H N+VR
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
            +G  L+   + ++ E +    L +FL E
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRE 141

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	146
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	9e-44
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-41
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	9e-40
3soc_A	322	Activin receptor type-2A; structural genomics cons	8e-23
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-15
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-12
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-12
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-12
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-12
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-12
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-12
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	5e-12
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	5e-12
4aoj_A	329	High affinity nerve growth factor receptor; transf	8e-12
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-11
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-11
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-11
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-11
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-11
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-11
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-11
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-11
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-11
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	4e-11
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-11
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	6e-11
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	7e-11
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	8e-11
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	9e-11
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	9e-11
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	9e-11
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-10
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-10
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-10
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-10
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-10
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-10
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-10
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-10
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	4e-10
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	6e-10
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	6e-10
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	6e-10
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	7e-10
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	8e-10
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	8e-10
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	8e-10
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	9e-10
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-09
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-09
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-09
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-09
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	6e-09
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-09
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	9e-09
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-08
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-08
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-08
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-08
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-08
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-08
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-08
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-08
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-08
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	7e-08
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-07
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-07
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-07
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	4e-07
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	6e-07
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	9e-07
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-06
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-06
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-06
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-06
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-06
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-06
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-06
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-06
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-06
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-06
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	5e-06
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	7e-06
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	7e-06
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	8e-06
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	8e-06
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	9e-06
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-05
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-05
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-05
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-05
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-05
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	5e-05
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-05
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	6e-05
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	6e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	6e-05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	7e-05
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	7e-05
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	9e-05
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	9e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-04
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-04
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-04
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-04
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-04
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-04
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	4e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	4e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-04
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	7e-04
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	9e-04

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  145 bits (367), Expect = 9e-44
 Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 16/145 (11%)

Query: 8   QNADNDITTLESLQFDFETIEDATNKFS------TDNKLGEGGFGV----LPNEHEIAVK 57
           +N   +++      F F  +++ TN F         NK+GEGGFGV      N   +AVK
Sbjct: 1   ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVK 60

Query: 58  RLS----RSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNF 113
           +L+     ++ +  Q+ + E+ V+AK QH NLV LLGF  + ++  LVY Y+PN  L + 
Sbjct: 61  KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 120

Query: 114 LYEPEKQGQWDCSRRYKIIGG--RG 136
           L   +         R KI  G   G
Sbjct: 121 LSCLDGTPPLSWHMRCKIAQGAANG 145

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  138 bits (350), Expect = 4e-41
 Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 12/144 (8%)

Query: 3   NVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVK 57
           N + +  + + +   ES +     +E+ATN F     +G G FG     VL +  ++A+K
Sbjct: 10  NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69

Query: 58  RLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEP 117
           R +  SSQG +E   E+  ++  +H +LV L+GFC ER E IL+Y+Y+ N  L   LY  
Sbjct: 70  RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129

Query: 118 EKQGQ---WDCSRRYKIIGG--RG 136
           +       W   +R +I  G  RG
Sbjct: 130 DLPTMSMSW--EQRLEICIGAARG 151

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  135 bits (341), Expect = 9e-40
 Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 9/124 (7%)

Query: 22  FDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSSSQGAQ-EINNEVV 75
           F    ++ A++ FS  N LG GGFG      L +   +AVKRL    +QG + +   EV 
Sbjct: 20  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE 79

Query: 76  VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE-PEKQGQWDCSRRYKIIGG 134
           +++   H NL+RL GFC+   E++LVY Y+ N  + + L E PE Q   D  +R +I  G
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139

Query: 135 --RG 136
             RG
Sbjct: 140 SARG 143

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 90.5 bits (225), Expect = 8e-23
 Identities = 19/124 (15%), Positives = 37/124 (29%), Gaps = 13/124 (10%)

Query: 19  SLQFDFETIEDATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEV 74
            +    E +   +           G FG +         +AVK       Q   +   EV
Sbjct: 11  GVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQS-WQNEYEV 69

Query: 75  VVVAKLQHINLVRLLGFCLE----REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYK 130
             +  ++H N+++ +G          +  L+  +     L +FL    K      +    
Sbjct: 70  YSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCH 125

Query: 131 IIGG 134
           I   
Sbjct: 126 IAET 129

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 71.0 bits (174), Expect = 1e-15
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 12/109 (11%)

Query: 20  LQFDFETIEDATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQG-AQEINNEV 74
           ++          +       +G G +G +     +E  +AVK  S ++ Q    E    +
Sbjct: 1   MEAAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEK--NI 58

Query: 75  VVVAKLQHINLVRLLGFCLE-----REEKILVYEYVPNKRLDNFLYEPE 118
             V  ++H N+ R +          R E +LV EY PN  L  +L    
Sbjct: 59  YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT 107

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 62.7 bits (153), Expect = 1e-12
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 13/102 (12%)

Query: 32  NKFSTDNKLGEGGFGV-------------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVA 78
                +  LG+G F                 +E E+ +K L ++    ++       +++
Sbjct: 8   EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67

Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           KL H +LV   G C+  +E ILV E+V    LD +L + +  
Sbjct: 68  KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC 109

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 61.9 bits (151), Expect = 2e-12
 Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 14/142 (9%)

Query: 10  ADNDITTLESLQF----DFETIEDATNKFSTDNKLGEGGFGVLP----NEHEIAVKRLSR 61
           +D DI T E+L F    D + ++      +   K+G G FG +     +  ++AVK L  
Sbjct: 11  SDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILME 70

Query: 62  S--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK 119
               ++   E   EV ++ +L+H N+V  +G   +     +V EY+    L   L++   
Sbjct: 71  QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130

Query: 120 QGQWDCSRRYKIIGGRGRDCSR 141
           + Q D  RR  +      D ++
Sbjct: 131 REQLDERRRLSM----AYDVAK 148

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 61.1 bits (149), Expect = 3e-12
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 6/88 (6%)

Query: 38  NKLGEGGFG-----VLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            ++G G FG        N+ ++A+K + R  +   ++   E  V+ KL H  LV+L G C
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72

Query: 93  LEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           LE+    LV E++ +  L ++L      
Sbjct: 73  LEQAPICLVTEFMEHGCLSDYLRTQRGL 100

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 60.8 bits (148), Expect = 4e-12
 Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 22/124 (17%)

Query: 10  ADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS 63
             ++             IE        + ++G+GGFG++       ++  +A+K L    
Sbjct: 4   GGSEFPKSRLPTLADNEIEY-------EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGD 56

Query: 64  SQGA-------QEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
           S+G        QE   EV +++ L H N+V+L G         +V E+VP   L + L +
Sbjct: 57  SEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLD 114

Query: 117 PEKQ 120
               
Sbjct: 115 KAHP 118

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 61.2 bits (149), Expect = 4e-12
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 12/114 (10%)

Query: 32  NKFSTDNKLGEGGFGVLP----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
            +   +  +G G FGV+        ++A+K++   S +  +    E+  ++++ H N+V+
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVK 65

Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR 141
           L G CL      LV EY     L N L+  E    +  +            CS+
Sbjct: 66  LYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW----CLQCSQ 113

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 60.7 bits (148), Expect = 4e-12
 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 7/94 (7%)

Query: 32  NKFSTDNKLGEGGFGV----LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
            +      +G+G FG         +++AVK +   ++  AQ    E  V+ +L+H NLV+
Sbjct: 21  KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQ 78

Query: 88  LLGFCLEREEKI-LVYEYVPNKRLDNFLYEPEKQ 120
           LLG  +E +  + +V EY+    L ++L    + 
Sbjct: 79  LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 112

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 60.7 bits (148), Expect = 5e-12
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 11/88 (12%)

Query: 38  NKLGEGGFG---------VLPNEHEI--AVKRLSRSSSQGAQEINNEVVVVAKLQHINLV 86
            +LGEG FG         + P + ++  AVK L   +    ++   E  ++  LQH ++V
Sbjct: 21  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFL 114
           +  G C + +  I+V+EY+ +  L+ FL
Sbjct: 81  KFYGVCGDGDPLIMVFEYMKHGDLNKFL 108

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 60.7 bits (148), Expect = 5e-12
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 6/94 (6%)

Query: 32  NKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLV 86
              +   +LG G FG         ++++A+K + +  S    E   E  V+  L H  LV
Sbjct: 24  KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLV 82

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +L G C ++    ++ EY+ N  L N+L E   +
Sbjct: 83  QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR 116

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 60.0 bits (146), Expect = 8e-12
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 11/88 (12%)

Query: 38  NKLGEGGFG---------VLPNEHEI--AVKRLSRSSSQGAQEINNEVVVVAKLQHINLV 86
            +LGEG FG         +LP + ++  AVK L  +S    Q+   E  ++  LQH ++V
Sbjct: 47  WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV 106

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFL 114
           R  G C E    ++V+EY+ +  L+ FL
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFL 134

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 59.6 bits (145), Expect = 1e-11
 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 12/95 (12%)

Query: 38  NKLGEGGFGV--------LPNEHEI--AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
            +LG+G FG         L +      AVK+L  S+ +  ++   E+ ++  LQH N+V+
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75

Query: 88  LLGFCLEREEK--ILVYEYVPNKRLDNFLYEPEKQ 120
             G C     +   L+ EY+P   L ++L + +++
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 110

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 59.7 bits (145), Expect = 1e-11
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 12/95 (12%)

Query: 38  NKLGEGGFGV--------LPNEHEI--AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
           ++LG+G FG         L +      AVK+L  S     ++   E+ ++  L    +V+
Sbjct: 29  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88

Query: 88  LLGFCLEREEK--ILVYEYVPNKRLDNFLYEPEKQ 120
             G       +   LV EY+P+  L +FL     +
Sbjct: 89  YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR 123

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 59.3 bits (144), Expect = 2e-11
 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 12/95 (12%)

Query: 38  NKLGEGGFGV--------LPNEHEI--AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
            +LG+G FG         L +      AVK+L  S+ +  ++   E+ ++  LQH N+V+
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106

Query: 88  LLGFCLEREEK--ILVYEYVPNKRLDNFLYEPEKQ 120
             G C     +   L+ EY+P   L ++L + +++
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 141

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 59.3 bits (144), Expect = 2e-11
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 10/99 (10%)

Query: 32  NKFSTDNKLGEGGFGV-------LPNEHEI--AVKRL-SRSSSQGAQEINNEVVVVAKLQ 81
              S D  +G G FG        LP++ EI  A+K L    + +  ++   E  ++ +  
Sbjct: 45  TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104

Query: 82  HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           H N++RL G   + +  ++V EY+ N  LD+FL + + Q
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 59.2 bits (144), Expect = 2e-11
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 7/90 (7%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRL-SRSSSQGAQEINNEVVVVAKLQHIN 84
                  ++G G FG         +   +AVK            +   E  ++ +  H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173

Query: 85  LVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           +VRL+G C +++   +V E V       FL
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 59.3 bits (144), Expect = 2e-11
 Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 32  NKFSTDNKLGEGGFGV----LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
            +      +G+G FG         +++AVK +   ++   Q    E  V+ +L+H NLV+
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQ 250

Query: 88  LLGFCLEREEKI-LVYEYVPNKRLDNFLYEPEKQ 120
           LLG  +E +  + +V EY+    L ++L    + 
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 284

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 10/94 (10%)

Query: 37  DNKLGEGGFGV-------LPNEHEI--AVKRL-SRSSSQGAQEINNEVVVVAKLQHINLV 86
           +  +G G  G        +P + ++  A+K L +  + +  ++  +E  ++ +  H N++
Sbjct: 54  EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           RL G        ++V EY+ N  LD FL   + Q
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ 147

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 58.4 bits (142), Expect = 3e-11
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%)

Query: 32  NKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLV 86
            + +   +LG G FG         ++++AVK + +  S    E   E   + KL H  LV
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLV 66

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFL 114
           +  G C +     +V EY+ N  L N+L
Sbjct: 67  KFYGVCSKEYPIYIVTEYISNGCLLNYL 94

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 58.4 bits (142), Expect = 3e-11
 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 38  NKLGEGGFGVLP----NEHEIAVKRL----SRSSSQGAQEINNEVVVVAKLQHINLVRLL 89
             +G GGFG +        E+AVK          SQ  + +  E  + A L+H N++ L 
Sbjct: 13  EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72

Query: 90  GFCLEREEKILVYEYVPNKRLDNFL 114
           G CL+     LV E+     L+  L
Sbjct: 73  GVCLKEPNLCLVMEFARGGPLNRVL 97

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 58.4 bits (142), Expect = 4e-11
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 12/95 (12%)

Query: 37  DNKLGEGGFGV----------LPNEHEIAVKRLSRSSSQGA-QEINNEVVVVAKLQHINL 85
              LG G FG              +  +A+K L  ++S  A +EI +E  V+A + + ++
Sbjct: 20  IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
            RLLG CL      L+ + +P   L +++ E +  
Sbjct: 80  CRLLGICLT-STVQLITQLMPFGCLLDYVREHKDN 113

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 58.1 bits (141), Expect = 4e-11
 Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 12/95 (12%)

Query: 37  DNKLGEGGFGV----------LPNEHEIAVKRL-SRSSSQGAQEINNEVVVVAKLQHINL 85
              LG G FG              +  + +K +  +S  Q  Q + + ++ +  L H ++
Sbjct: 18  LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           VRLLG C       LV +Y+P   L + + +    
Sbjct: 78  VRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGA 111

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 58.1 bits (141), Expect = 6e-11
 Identities = 30/119 (25%), Positives = 45/119 (37%), Gaps = 12/119 (10%)

Query: 38  NKLGEGGFG---------VLPNEHEI--AVKRLSRSSSQGA-QEINNEVVVVAKLQHINL 85
             +GEG FG         +LP E     AVK L   +S     +   E  ++A+  + N+
Sbjct: 53  RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL 144
           V+LLG C   +   L++EY+    L+ FL           S        R        L
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 57.6 bits (140), Expect = 7e-11
 Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 13/96 (13%)

Query: 37  DNKLGEGGFGV-------LPNEHEI--AVKRL---SRSSSQGAQEINNEVVVVAKLQHIN 84
             KLG+G FGV        P+   +  AVK L     S  +   +   EV  +  L H N
Sbjct: 23  LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82

Query: 85  LVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           L+RL G  L      +V E  P   L + L + +  
Sbjct: 83  LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGH 117

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 57.3 bits (139), Expect = 8e-11
 Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 11/100 (11%)

Query: 32  NKFSTDNKLGEGGFGV----------LPNEHEIAVKRL-SRSSSQGAQEINNEVVVVAKL 80
           +  +    +G G FG              E  +A+K L +  + +   +   E  ++ + 
Sbjct: 44  SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103

Query: 81  QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
            H N++RL G   + +  +++ EY+ N  LD FL E + +
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE 143

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 57.2 bits (139), Expect = 9e-11
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 12/89 (13%)

Query: 38  NKLGEGGFG---------VLPNEHEI--AVKRLSRSSSQGA-QEINNEVVVVAKLQHINL 85
            +LGE  FG           P E     A+K L   +     +E  +E ++ A+LQH N+
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           V LLG   + +   +++ Y  +  L  FL
Sbjct: 75  VCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 57.3 bits (139), Expect = 9e-11
 Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 6/92 (6%)

Query: 38  NKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGF 91
             LG+G FG             + +K L R   +  +    EV V+  L+H N+++ +G 
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75

Query: 92  CLEREEKILVYEYVPNKRLDNFLYEPEKQGQW 123
             + +    + EY+    L   +   + Q  W
Sbjct: 76  LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPW 107

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 56.9 bits (138), Expect = 9e-11
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 9/108 (8%)

Query: 32  NKFSTDNKLGEGGFGVLP----NEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINL 85
            + +   KL E   G L       ++I VK L     S++ +++ N E   +    H N+
Sbjct: 10  KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69

Query: 86  VRLLGFCLEREEKIL--VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKI 131
           + +LG C          +  ++P   L N L+E       D S+  K 
Sbjct: 70  LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF-VVDQSQAVKF 116

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 56.5 bits (137), Expect = 2e-10
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 12/89 (13%)

Query: 38  NKLGEGGFG---------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVAKLQHINL 85
             LG G FG         +  +   +  AVK L    S+  + +   E ++++K  H N+
Sbjct: 36  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           VR +G  L+   + ++ E +    L +FL
Sbjct: 96  VRCIGVSLQSLPRFILMELMAGGDLKSFL 124

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 56.1 bits (136), Expect = 2e-10
 Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 13/121 (10%)

Query: 11  DNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGV---------LPNEHEIAVKRLSR 61
           D D   L  ++ D   I        +D  +G+G FGV           N  + A+K LSR
Sbjct: 2   DLDSALLAEVK-DVL-IPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR 59

Query: 62  SSSQGA-QEINNEVVVVAKLQHINLVRLLGFCLEREEKIL-VYEYVPNKRLDNFLYEPEK 119
            +     +    E +++  L H N++ L+G  L  E     +  Y+ +  L  F+  P++
Sbjct: 60  ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR 119

Query: 120 Q 120
            
Sbjct: 120 N 120

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 56.1 bits (136), Expect = 2e-10
 Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 7/94 (7%)

Query: 32  NKFSTDNKLGEGGFG-----VLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLV 86
                  +LG G FG           ++AVK L +  S        E  ++ +LQH  LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 71

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           RL     +    I + EY+ N  L +FL  P   
Sbjct: 72  RLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGI 104

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 56.2 bits (136), Expect = 2e-10
 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 12/100 (12%)

Query: 32  NKFSTDNKLGEGGFGV----------LPNEHEIAVKRLSRSSSQGA-QEINNEVVVVAKL 80
            +F     LG G FG              +  +A+K L  ++S  A +EI +E  V+A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 81  QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
            + ++ RLLG CL      L+ + +P   L +++ E +  
Sbjct: 75  DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDN 113

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 56.2 bits (136), Expect = 2e-10
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 12/89 (13%)

Query: 38  NKLGEGGFG---------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVAKLQHINL 85
             LG G FG         +  +   +  AVK L    S+  + +   E ++++K  H N+
Sbjct: 77  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           VR +G  L+   + ++ E +    L +FL
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFL 165

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 55.9 bits (135), Expect = 3e-10
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 7/88 (7%)

Query: 38  NKLGEGGFG-----VLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            KLG G FG           ++AVK + +  S   +    E  V+  LQH  LV+L    
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252

Query: 93  LEREEKILVYEYVPNKRLDNFLYEPEKQ 120
            + E   ++ E++    L +FL   E  
Sbjct: 253 TK-EPIYIITEFMAKGSLLDFLKSDEGS 279

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 55.7 bits (135), Expect = 3e-10
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINL 85
              +  +KLG G +G             +AVK L +  +   +E   E  V+ +++H NL
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           V+LLG C       ++ E++    L ++L E  +Q
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 106

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 55.9 bits (135), Expect = 3e-10
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 38  NKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGF 91
           +KLG G +G             +AVK L +  +   +E   E  V+ +++H NLV+LLG 
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284

Query: 92  CLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           C       ++ E++    L ++L E  +Q
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQ 313

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 55.4 bits (134), Expect = 4e-10
 Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 15/120 (12%)

Query: 8   QNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGV--------LPNEHEI--AVK 57
            +    +  L     D                LGEG FG           +      AVK
Sbjct: 9   HHHHGALEVLFQGPGDPTVFHK--RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVK 66

Query: 58  RL-SRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK--ILVYEYVPNKRLDNFL 114
            L + +  Q       E+ ++  L H ++++  G C +       LV EYVP   L ++L
Sbjct: 67  ALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL 126

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 55.0 bits (133), Expect = 6e-10
 Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 12/89 (13%)

Query: 38  NKLGEGGFG---------VLPNEHEI--AVKRLSRSSSQGA-QEINNEVVVVAKLQHINL 85
            +LG+G FG         V+ +E E   A+K ++ ++S     E  NE  V+ +    ++
Sbjct: 31  RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           VRLLG   + +  +++ E +    L ++L
Sbjct: 91  VRLLGVVSQGQPTLVIMELMTRGDLKSYL 119

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 55.3 bits (133), Expect = 6e-10
 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 10/94 (10%)

Query: 36  TDNKLGEGGFGV-------LPNEH-EIAVKRLSRSSSQGA-QEINNEVVVVAKLQHINLV 86
            D +LG G FG        +  +  ++A+K L + + +   +E+  E  ++ +L +  +V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           RL+G C   E  +LV E      L  FL    ++
Sbjct: 400 RLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREE 432

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 54.9 bits (133), Expect = 6e-10
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 12/95 (12%)

Query: 32  NKFSTDNKLGEGGFGV-----------LPNEHEIAVKRLSRSSSQGA-QEINNEVVVVAK 79
                   LGEG FG                  +AVK L  ++S    +++ +E  V+ +
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82

Query: 80  LQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           + H ++++L G C +    +L+ EY     L  FL
Sbjct: 83  VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 54.6 bits (132), Expect = 7e-10
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 11/99 (11%)

Query: 27  IEDATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGA-QEINNEVVV 76
           I  ++     +  +G G FG       +  +  +I  AVK L+R +  G   +   E ++
Sbjct: 20  IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 79

Query: 77  VAKLQHINLVRLLGFCLEREEKIL-VYEYVPNKRLDNFL 114
           +    H N++ LLG CL  E   L V  Y+ +  L NF+
Sbjct: 80  MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 118

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 54.2 bits (131), Expect = 8e-10
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 13/96 (13%)

Query: 38  NKLGEGGFG--------VLPNEHEI--AVKRL-SRSSSQGAQEINNEVVVVAKLQHINLV 86
             LGEG FG           +      AVK L   S      ++  E+ ++  L H N+V
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86

Query: 87  RLLGFCLEREEK--ILVYEYVPNKRLDNFLYEPEKQ 120
           +  G C E       L+ E++P+  L  +L + + +
Sbjct: 87  KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK 122

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 54.1 bits (131), Expect = 8e-10
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 11/92 (11%)

Query: 39  KLGEGGFGV-------LPNEHEI--AVKRLSRSSSQGA-QEINNEVVVVAKLQHINLVRL 88
            LGEG FG             +I  AVK   +  +    ++  +E V++  L H ++V+L
Sbjct: 19  ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78

Query: 89  LGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +G   E E   ++ E  P   L ++L   +  
Sbjct: 79  IGIIEE-EPTWIIMELYPYGELGHYLERNKNS 109

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 54.2 bits (131), Expect = 8e-10
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 10/93 (10%)

Query: 37  DNKLGEGGFGV--------LPNEHEIAVKRL-SRSSSQGAQEINNEVVVVAKLQHINLVR 87
           D +LG G FG            + ++A+K L   +     +E+  E  ++ +L +  +VR
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74

Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           L+G C   E  +LV E      L  FL    ++
Sbjct: 75  LIGVCQA-EALMLVMEMAGGGPLHKFLVGKREE 106

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 54.4 bits (131), Expect = 9e-10
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 11/95 (11%)

Query: 37  DNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGA-QEINNEVVVVAKLQHINLV 86
           +  +G G FG       +  +  +I  AVK L+R +  G   +   E +++    H N++
Sbjct: 94  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153

Query: 87  RLLGFCLEREEKIL-VYEYVPNKRLDNFLYEPEKQ 120
            LLG CL  E   L V  Y+ +  L NF+      
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN 188

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 54.5 bits (131), Expect = 1e-09
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 7/88 (7%)

Query: 38  NKLGEGGFG-----VLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            KLG+G FG            +A+K L +  +   +    E  V+ KL+H  LV+L    
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331

Query: 93  LEREEKILVYEYVPNKRLDNFLYEPEKQ 120
            E    I V EY+    L +FL     +
Sbjct: 332 SEEPIYI-VTEYMSKGSLLDFLKGETGK 358

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 53.8 bits (130), Expect = 1e-09
 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 13/96 (13%)

Query: 32  NKFSTDNKLGEGGFGV-----------LPNEHEIAVKRLSRSSSQGA-QEINNEVVVVAK 79
           N+ S    LG G FG                  +AVK L  S+     + + +E+ V++ 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 80  L-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           L  H+N+V LLG C      +++ EY     L NFL
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 7/88 (7%)

Query: 38  NKLGEGGFG-----VLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
            KLG+G FG            +A+K L +  +   +    E  V+ KL+H  LV+L    
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248

Query: 93  LEREEKILVYEYVPNKRLDNFLYEPEKQ 120
            E    I V EY+    L +FL     +
Sbjct: 249 SEEPIYI-VTEYMSKGSLLDFLKGETGK 275

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 32  NKFSTDNKLGEGGFGV-------LPNEHEI--AVKRL-SRSSSQGAQEINNEVVVVAKLQ 81
            +      +GEG FG         P    +  A+K   + +S    ++   E + + +  
Sbjct: 15  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74

Query: 82  HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           H ++V+L+G   E     ++ E      L +FL   +  
Sbjct: 75  HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS 112

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 52.7 bits (127), Expect = 3e-09
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 10/88 (11%)

Query: 37  DNKLGEGGFGV--------LPNEHEIAVKRLSRSSSQGA-QEINNEVVVVAKL-QHINLV 86
            + +GEG FG              + A+KR+   +S+   ++   E+ V+ KL  H N++
Sbjct: 30  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFL 114
            LLG C  R    L  EY P+  L +FL
Sbjct: 90  NLLGACEHRGYLYLAIEYAPHGNLLDFL 117

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 52.7 bits (127), Expect = 3e-09
 Identities = 15/91 (16%), Positives = 38/91 (41%), Gaps = 11/91 (12%)

Query: 38  NKLGEGGFGVLPNEH------EIAVKRL--SRSSSQGAQEINNEVVVVAKLQHINLVRLL 89
             +G+G FG +   +      E+A++ +   R +    +    EV+   + +H N+V  +
Sbjct: 39  ELIGKGRFGQV---YHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95

Query: 90  GFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           G C+      ++      + L + + + +  
Sbjct: 96  GACMSPPHLAIITSLCKGRTLYSVVRDAKIV 126

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 51.9 bits (125), Expect = 6e-09
 Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 11/106 (10%)

Query: 8   QNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSR 61
           ++ +      + L++D+E  E+          LG+G +G+      L N+  IA+K +  
Sbjct: 3   RSTEEGDCESDLLEYDYEYDENGDRVV-----LGKGTYGIVYAGRDLSNQVRIAIKEIPE 57

Query: 62  SSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPN 107
             S+ +Q ++ E+ +   L+H N+V+ LG   E     +  E VP 
Sbjct: 58  RDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 52.0 bits (125), Expect = 6e-09
 Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 10/107 (9%)

Query: 26  TIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAK 79
            +      +    KLGEGGF        L + H  A+KR+     Q  +E   E  +   
Sbjct: 23  MVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRL 82

Query: 80  LQHINLVRLLGFCLEREEK----ILVYEYVPNKRLDNFLYEPEKQGQ 122
             H N++RL+ +CL          L+  +     L N +   + +G 
Sbjct: 83  FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN 129

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 51.5 bits (124), Expect = 9e-09
 Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 14/97 (14%)

Query: 32  NKFSTDNKLGEGGFGV-----------LPNEHEIAVKRLSRSSSQGA-QEINNEVVVVAK 79
           ++      LG G FG                  +AVK L   ++    + + +E+ ++  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86

Query: 80  L-QHINLVRLLGFCLEREEKI-LVYEYVPNKRLDNFL 114
           +  H+N+V LLG C +    + ++ E+     L  +L
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 11/88 (12%)

Query: 37  DNKLGEGGFG-----VLPNEH---EIAVKRL--SRSSSQGAQEINNEVVVVAKLQHINLV 86
           D +LG G FG         +     +AVK L    +      E+  E  V+ +L +  +V
Sbjct: 22  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFL 114
           R++G C   E  +LV E      L+ +L
Sbjct: 82  RMIGICEA-ESWMLVMEMAELGPLNKYL 108

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 51.4 bits (123), Expect = 1e-08
 Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 11/94 (11%)

Query: 37  DNKLGEGGFG-------VLPNEHEI--AVKRL-SRSSSQGAQEINNEVVVVAKLQHINLV 86
              +GEG FG       + P    +  A+K   + +S    ++   E + + +  H ++V
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
           +L+G   E     ++ E      L +FL   +  
Sbjct: 455 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS 487

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 51.2 bits (123), Expect = 1e-08
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 17/100 (17%)

Query: 32  NKFSTDNKLGEGGFGV---------LPNEHEIAVKRLSRSSSQGAQEIN--NEVVVVAKL 80
            +F+    LG+G FG            +  ++AVK L       +       E   + + 
Sbjct: 23  QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82

Query: 81  QHINLVRLLGFCLEREEKI------LVYEYVPNKRLDNFL 114
            H ++ +L+G  L    K       ++  ++ +  L  FL
Sbjct: 83  DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL 122

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 50.7 bits (122), Expect = 2e-08
 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 13/96 (13%)

Query: 32  NKFSTDNKLGEGGFGV-----------LPNEHEIAVKRL-SRSSSQGAQEINNEVVVVAK 79
           N       LG G FG                 ++AVK L S + +   + + +E+ +++ 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105

Query: 80  L-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           L QH N+V LLG C      +++ EY     L NFL
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 15/98 (15%)

Query: 32  NKFSTDNKLGEGGFGV-------------LPNEHEIAVKRLSRSSSQGA-QEINNEVVVV 77
           +K +    LGEG FG                    +AVK L   +++    ++ +E+ ++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94

Query: 78  AKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
             + +H N++ LLG C +     ++ EY     L  +L
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 50.7 bits (122), Expect = 2e-08
 Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 16/99 (16%)

Query: 32  NKFSTDNKLGEGGFGV---------LPNEHEIAVKRLSRSSSQGAQEIN--NEVVVVAKL 80
           N       LGEG FG               ++AVK +   +S   +     +E   +   
Sbjct: 34  NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF 93

Query: 81  QHINLVRLLGFCLERE-----EKILVYEYVPNKRLDNFL 114
            H N++RLLG C+E       + +++  ++    L  +L
Sbjct: 94  SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 50.4 bits (121), Expect = 2e-08
 Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 15/98 (15%)

Query: 32  NKFSTDNKLGEGGFGV-------------LPNEHEIAVKRLSRSSSQGA-QEINNEVVVV 77
           +K +    LGEG FG                    +AVK L   +++    ++ +E+ ++
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140

Query: 78  AKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
             + +H N++ LLG C +     ++ EY     L  +L
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 178

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 50.4 bits (121), Expect = 2e-08
 Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 13/96 (13%)

Query: 32  NKFSTDNKLGEGGFGV-----------LPNEHEIAVKRLSRSSSQGA-QEINNEVVVVAK 79
                   LG G FG                 ++AVK L   +     + + +E+ ++ +
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104

Query: 80  L-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           L  H N+V LLG C       L++EY     L N+L
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 49.8 bits (119), Expect = 4e-08
 Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 28  EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ 81
           +   + +    +LG G FGV+         +  A K +        + +  E+  ++ L+
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR 212

Query: 82  HINLVRLLGFCLEREEKILVYEYV 105
           H  LV L     +  E +++YE++
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFM 236

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 49.6 bits (119), Expect = 4e-08
 Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 14/92 (15%)

Query: 38  NKLGEGGFGVLPNEH------EIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLL 89
            ++G G FG +   +      ++AVK L+ +  + Q  Q   NEV V+ K +H+N++  +
Sbjct: 30  QRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86

Query: 90  GFCLEREEKI-LVYEYVPNKRLDNFLYEPEKQ 120
           G+      ++ +V ++     L + L+  E +
Sbjct: 87  GYS--TAPQLAIVTQWCEGSSLYHHLHASETK 116

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 49.2 bits (118), Expect = 6e-08
 Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 7/94 (7%)

Query: 19  SLQFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQE-IN 71
           S + +        + F    KLG G FG         +  E  +K +++  SQ   E I 
Sbjct: 9   SGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIE 68

Query: 72  NEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV 105
            E+ V+  L H N++++     +     +V E  
Sbjct: 69  AEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 48.9 bits (117), Expect = 7e-08
 Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 15/93 (16%)

Query: 37  DNKLGEGGFG---------VLPNEHE----IAVKRLSRSSSQGA-QEINNEVVVVAKL-Q 81
              LGEG FG         +  ++      +AVK L   +++    ++ +E+ ++  + +
Sbjct: 74  GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133

Query: 82  HINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           H N++ LLG C +     ++ EY     L  +L
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL 166

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 6/84 (7%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ 81
               + +    +LG G FGV               K ++         + NE+ ++ +L 
Sbjct: 47  GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH 106

Query: 82  HINLVRLLGFCLEREEKILVYEYV 105
           H  L+ L     ++ E +L+ E++
Sbjct: 107 HPKLINLHDAFEDKYEMVLILEFL 130

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 9/99 (9%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQE-INNEVVVVAKLQHIN 84
           + +   + LG+G                 A+K  +  S     +    E  V+ KL H N
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 85  LVRLLGF--CLEREEKILVYEYVPNKRLDNFLYEPEKQG 121
           +V+L           K+L+ E+ P   L   L EP    
Sbjct: 69  IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY 107

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 47.9 bits (114), Expect = 2e-07
 Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 9/99 (9%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQE-INNEVVVVAKLQHIN 84
           + +   + LG+G                 A+K  +  S     +    E  V+ KL H N
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 85  LVRLLGF--CLEREEKILVYEYVPNKRLDNFLYEPEKQG 121
           +V+L           K+L+ E+ P   L   L EP    
Sbjct: 69  IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY 107

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 47.0 bits (112), Expect = 4e-07
 Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 19  SLQFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRS--SSQGAQEI 70
           S + +         +++    LG+G FG          + E AVK ++++   ++    I
Sbjct: 9   SGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI 68

Query: 71  NNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV 105
             EV ++ KL H N+++L     +     +V E  
Sbjct: 69  LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELY 103

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 46.7 bits (111), Expect = 5e-07
 Identities = 21/109 (19%), Positives = 35/109 (32%), Gaps = 15/109 (13%)

Query: 7   EQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVK--R 58
           E   +  +   E L+       +  +  +   ++G G FG            + AVK  R
Sbjct: 33  ETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR 92

Query: 59  LSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPN 107
           L     +       E+V  A L    +V L G   E     +  E +  
Sbjct: 93  LEVFRVE-------ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 46.4 bits (111), Expect = 6e-07
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 6/84 (7%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ 81
            D    ++ +N +G G +G              A K++ +   +       E+ ++  L 
Sbjct: 5   GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64

Query: 82  HINLVRLLGFCLEREEKILVYEYV 105
           H N++RL     +  +  LV E  
Sbjct: 65  HPNIIRLYETFEDNTDIYLVMELC 88

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 45.8 bits (109), Expect = 9e-07
 Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 12  NDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQ 65
           +D   LE L+    ++ D   K++   K+G+G  G       +    E+A+++++     
Sbjct: 1   SDEEILEKLR-SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP 59

Query: 66  GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY 104
             + I NE++V+ + ++ N+V  L   L  +E  +V EY
Sbjct: 60  KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 8/95 (8%)

Query: 19  SLQFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQE--I 70
           S + +         +++    LG+G FG          + E AVK ++++S++      I
Sbjct: 9   SGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI 68

Query: 71  NNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV 105
             EV ++ KL H N+++L     +     +V E  
Sbjct: 69  LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELY 103

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 14/84 (16%), Positives = 34/84 (40%), Gaps = 7/84 (8%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ 81
           ++   K+     LG G FG+        ++     K +          +  E+ ++   +
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIAR 59

Query: 82  HINLVRLLGFCLEREEKILVYEYV 105
           H N++ L       EE ++++E++
Sbjct: 60  HRNILHLHESFESMEELVMIFEFI 83

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 6/85 (7%)

Query: 26  TIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAK 79
              D      +  K+GEG  G+        +  ++AVK +     Q  + + NEVV++  
Sbjct: 39  DQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRD 98

Query: 80  LQHINLVRLLGFCLEREEKILVYEY 104
            QH N+V +    L  EE  ++ E+
Sbjct: 99  YQHFNVVEMYKSYLVGEELWVLMEF 123

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 19/100 (19%), Positives = 41/100 (41%), Gaps = 9/100 (9%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRL---SRSSSQGAQEINNEVVVVAKLQH 82
             F  + K+G G F        L +   +A+K++       ++   +   E+ ++ +L H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 83  INLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQ 122
            N+++     +E  E  +V E      L   +   +KQ +
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKR 131

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 6/85 (7%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ 81
            +    F     LG G F               A+K + +S +     + NE+ V+ K++
Sbjct: 5   TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK 64

Query: 82  HINLVRLLGFCLEREEKILVYEYVP 106
           H N+V L           LV + V 
Sbjct: 65  HENIVTLEDIYESTTHYYLVMQLVS 89

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 8/86 (9%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRS--SSQGAQEINNEVVVVAK 79
              +  +    KLG G +G            E A+K + ++  S+    ++  EV V+  
Sbjct: 33  GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKL 92

Query: 80  LQHINLVRLLGFCLEREEKILVYEYV 105
           L H N+++L  F  ++    LV E  
Sbjct: 93  LDHPNIMKLYDFFEDKRNYYLVMECY 118

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 20/99 (20%)

Query: 23  DFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVV 76
           DF+ IE           +G GGFG         +     +KR+  ++    ++   EV  
Sbjct: 12  DFKEIE----------LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKA 57

Query: 77  VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
           +AKL H+N+V   G     +          ++     L+
Sbjct: 58  LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLF 96

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 44.3 bits (105), Expect = 3e-06
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 6/79 (7%)

Query: 33  KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLV 86
             S    LG G FG +          ++A K +     +  +E+ NE+ V+ +L H NL+
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149

Query: 87  RLLGFCLEREEKILVYEYV 105
           +L      + + +LV EYV
Sbjct: 150 QLYDAFESKNDIVLVMEYV 168

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 44.3 bits (105), Expect = 4e-06
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 9/87 (10%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRS---SSQGAQEINNEVVVVA 78
              ++++     LG+G FG            E AVK +S+         + +  EV ++ 
Sbjct: 22  AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81

Query: 79  KLQHINLVRLLGFCLEREEKILVYEYV 105
           +L H N+++L  F  ++    LV E  
Sbjct: 82  QLDHPNIMKLYEFFEDKGYFYLVGEVY 108

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 43.7 bits (104), Expect = 4e-06
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 8/86 (9%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRS--SSQGAQEINNEVVVVAK 79
              ++ +    +LG+G F V           E A K ++    S++  Q++  E  +  K
Sbjct: 2   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61

Query: 80  LQHINLVRLLGFCLEREEKILVYEYV 105
           LQH N+VRL     E     LV++ V
Sbjct: 62  LQHPNIVRLHDSIQEESFHYLVFDLV 87

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 43.9 bits (103), Expect = 4e-06
 Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 13/102 (12%)

Query: 33  KFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQE-INNEVVVVAKLQHINL 85
            +    +LG GGFG            ++A+K+  +  S   +E    E+ ++ KL H N+
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74

Query: 86  VRLL------GFCLEREEKILVYEYVPNKRLDNFLYEPEKQG 121
           V               +  +L  EY     L  +L + E   
Sbjct: 75  VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC 116

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 43.7 bits (103), Expect = 5e-06
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 11/108 (10%)

Query: 9   NADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVK----- 57
           +  +  +  E+L F   ++ +   K+     +G+G +GV             A+K     
Sbjct: 3   HHHHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKN 62

Query: 58  RLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV 105
           ++ + + +  + I  EV ++ KL H N+ RL     + +   LV E  
Sbjct: 63  KIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELC 110

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 43.8 bits (103), Expect = 5e-06
 Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 14/111 (12%)

Query: 18  ESLQFDFETIEDATNKFSTDNKLGEGGFGV-----------LPNEHEIAVKRLSRSSSQG 66
           E L +D    E   ++      LG G FG                  +AVK L   ++  
Sbjct: 8   ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 67

Query: 67  A-QEINNEVVVVAKL-QHINLVRLLGFCLEREEKILV-YEYVPNKRLDNFL 114
             + + +E+ ++  +  H+N+V LLG C +    ++V  E+     L  +L
Sbjct: 68  EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 43.5 bits (103), Expect = 7e-06
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 15/95 (15%)

Query: 23  DFETIEDATNKFSTDNKLGEGGFGV-----LPNEHEIAVKRLSRSSSQGAQEINNEVVVV 77
           D +T E     ++    +G G FGV     L    E+A+K++     Q  +  N E+ ++
Sbjct: 31  DGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIM 86

Query: 78  AKLQHINLVRLLGFCLEREEKI------LVYEYVP 106
             ++H N+V L  F     +K       LV EYVP
Sbjct: 87  RIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP 121

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 43.2 bits (102), Expect = 7e-06
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 14/111 (12%)

Query: 25  ETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVA 78
           +T+E    +      L EGGF        + +  E A+KRL  +  +  + I  EV  + 
Sbjct: 21  QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMK 80

Query: 79  KLQ-HINLVRLLGFCLEREEK-------ILVYEYVPNKRLDNFLYEPEKQG 121
           KL  H N+V+        +E+        L+   +   +L  FL + E +G
Sbjct: 81  KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG 131

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 43.1 bits (102), Expect = 8e-06
 Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 9/101 (8%)

Query: 31  TNKFSTDNKLGEGGFGV------LPNEHEIAVKR--LSRSSSQGAQEINNEVVVVAKL-Q 81
           T +F    K+G G FG         +    A+KR     + S   Q    EV   A L Q
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 82  HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQ 122
           H ++VR      E +  ++  EY     L + + E  +   
Sbjct: 70  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMS 110

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 43.1 bits (102), Expect = 8e-06
 Identities = 18/110 (16%), Positives = 42/110 (38%), Gaps = 9/110 (8%)

Query: 5   VAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRL 59
           +   +  +    L +    F+++      +S   ++G GG   +       +   A+K +
Sbjct: 1   MHHHHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYV 60

Query: 60  SRS--SSQGAQEINNEVVVVAKLQHINL--VRLLGFCLEREEKILVYEYV 105
           +     +Q      NE+  + KLQ  +   +RL  + +  +   +V E  
Sbjct: 61  NLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG 110

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 42.8 bits (101), Expect = 9e-06
 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 14/103 (13%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVK--RLSRSSSQGAQEINNEVVVVAKLQHI 83
            K+    K+GEG FG         +  +  +K   +SR SS+  +E   EV V+A ++H 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 84  NLVRLLGFCLEREEKILVYEYVPNKRLDNFL------YEPEKQ 120
           N+V+      E     +V +Y     L   +         E Q
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQ 126

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 26/113 (23%)

Query: 40  LGEGGFGV------LPNEHEIAVKRLSRSS--SQGAQE-INNEVVVVAKLQHINLVRLLG 90
           LG+GGF           +   A K + +S       +E ++ E+ +   L H ++V   G
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82

Query: 91  FCLEREEKI-LVYEYVPNKRLDNF------LYEPEKQGQWDCSRRY--KIIGG 134
              E  + + +V E    + L         L EPE       +R Y  +I+ G
Sbjct: 83  -FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE-------ARYYLRQIVLG 127

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 8/93 (8%)

Query: 21  QFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRS--SSQGAQEINN 72
           +F        ++ +    +LG+G F V           E A K ++    S++  Q++  
Sbjct: 18  EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER 77

Query: 73  EVVVVAKLQHINLVRLLGFCLEREEKILVYEYV 105
           E  +  KLQH N+VRL     E     LV++ V
Sbjct: 78  EARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 110

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 12/90 (13%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGA------QEINNEVV 75
           +   + +    +LG G F +           E A K + +  S+ +      +EI  EV 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67

Query: 76  VVAKLQHINLVRLLGFCLEREEKILVYEYV 105
           ++ ++ H N++ L      R + +L+ E V
Sbjct: 68  ILRQVLHPNIITLHDVYENRTDVVLILELV 97

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 11/86 (12%)

Query: 31  TNKFSTDNKLGEGGFGV------LPNEHEIAVK-----RLSRSSSQGAQEINNEVVVVAK 79
            + +     +G+G F V           + AVK     + + S     +++  E  +   
Sbjct: 23  EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82

Query: 80  LQHINLVRLLGFCLEREEKILVYEYV 105
           L+H ++V LL          +V+E++
Sbjct: 83  LKHPHIVELLETYSSDGMLYMVFEFM 108

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 42.7 bits (100), Expect = 1e-05
 Identities = 13/101 (12%), Positives = 28/101 (27%), Gaps = 11/101 (10%)

Query: 25  ETIEDATNKFSTDNKLGEGGFGV-----------LPNEHEIAVKRLSRSSSQGAQEINNE 73
              +  +      + LGEG F               N+ +  +K    ++          
Sbjct: 58  TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQL 117

Query: 74  VVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           +  +        ++     L +   +LV E      L N +
Sbjct: 118 MERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAI 158

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 10/91 (10%)

Query: 31  TNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHIN 84
            + F     LG+G FG         +    A+K++  +  +    I +EV+++A L H  
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQY 63

Query: 85  LVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
           +VR     LER   +     V  K   + L+
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKK---STLF 91

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 26/113 (23%)

Query: 40  LGEGGFGV------LPNEHEIAVKRLSRSS--SQGAQE-INNEVVVVAKLQHINLVRLLG 90
           LG+GGF           +   A K + +S       +E ++ E+ +   L H ++V   G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108

Query: 91  FCLEREEKI-LVYEYVPNKRLDNF------LYEPEKQGQWDCSRRY--KIIGG 134
              E  + + +V E    + L         L EPE       +R Y  +I+ G
Sbjct: 109 -FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE-------ARYYLRQIVLG 153

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 12/90 (13%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGA------QEINNEVV 75
           E+  + + T  +LG G F V           + A K + +  ++ +      ++I  EV 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66

Query: 76  VVAKLQHINLVRLLGFCLEREEKILVYEYV 105
           ++ ++QH N++ L      + + IL+ E V
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELV 96

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 12/90 (13%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGA------QEINNEVV 75
           +   + +    +LG G F +           E A K + +  S+ +      +EI  EV 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67

Query: 76  VVAKLQHINLVRLLGFCLEREEKILVYEYV 105
           ++ ++ H N++ L      R + +L+ E V
Sbjct: 68  ILRQVLHHNVITLHDVYENRTDVVLILELV 97

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 10/101 (9%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVK--RLSRSSSQGAQEINNEVVVVAKLQHI 83
             +     +G G +G         +   +  K       +    Q + +EV ++ +L+H 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 84  NLVRLLGFCLEREEKIL--VYEYVPNKRLDNFLYEPEKQGQ 122
           N+VR     ++R    L  V EY     L + + +  K+ Q
Sbjct: 66  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ 106

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 12/89 (13%)

Query: 29  DATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGA------QEINNEVVV 76
              + +    +LG G F +           E A K + +     +      +EI  EV +
Sbjct: 2   MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61

Query: 77  VAKLQHINLVRLLGFCLEREEKILVYEYV 105
           + +++H N++ L      + + +L+ E V
Sbjct: 62  LREIRHPNIITLHDIFENKTDVVLILELV 90

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 41.2 bits (97), Expect = 3e-05
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ 81
            D    +    +LG+G FG              A K +   S +  ++   E+ ++A   
Sbjct: 15  LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD 74

Query: 82  HINLVRLLGFCLEREEKILVYEY 104
           H  +V+LLG      +  ++ E+
Sbjct: 75  HPYIVKLLGAYYHDGKLWIMIEF 97

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 11/86 (12%)

Query: 32  NKFSTDNKLGEGGFG------VLPNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQH 82
             F     LG+G FG         ++  +A+K L ++    +    ++  EV + + L+H
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68

Query: 83  INLVRLLGFCLEREEKI-LVYEYVPN 107
            N++RL G+      ++ L+ EY P 
Sbjct: 69  PNILRLYGY-FHDATRVYLILEYAPL 93

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 40.8 bits (96), Expect = 4e-05
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 11/86 (12%)

Query: 38  NKLGEGGFGVLP----NEHEIAVKRL-SRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
             +G+G +G +         +AVK   SR      +E   E+     L+H N++  +   
Sbjct: 14  ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRET--ELYNTVMLRHENILGFIASD 71

Query: 93  LEREEKI----LVYEYVPNKRLDNFL 114
           +          L+  Y     L ++L
Sbjct: 72  MTSRHSSTQLWLITHYHEMGSLYDYL 97

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 40.8 bits (96), Expect = 5e-05
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 12/90 (13%)

Query: 37  DNKLGEGGFGV------LPNEHEIAVK--RLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
           D ++G G F             E+A    +  + +    Q    E  ++  LQH N+VR 
Sbjct: 31  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 90

Query: 89  LGFCLEREEK----ILVYEYVPNKRLDNFL 114
                   +     +LV E + +  L  +L
Sbjct: 91  YDSWESTVKGKKCIVLVTELMTSGTLKTYL 120

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 40.6 bits (96), Expect = 5e-05
 Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 11/100 (11%)

Query: 40  LGEGGFGV------LPNEHEIAVKRLSRSS--SQGAQE-INNEVVVVAKLQHINLVRLLG 90
           LG+G F        +    E+A+K + + +    G  + + NEV +  +L+H +++ L  
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78

Query: 91  FCLEREEKI-LVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
              E    + LV E   N  ++ +L    K    + +R +
Sbjct: 79  -YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF 117

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 40.7 bits (96), Expect = 6e-05
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 8/88 (9%)

Query: 26  TIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGA--QEINNEVVVV 77
           T    T ++    +LG+G F V      +    E A   ++         Q++  E  + 
Sbjct: 5   TCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARIC 64

Query: 78  AKLQHINLVRLLGFCLEREEKILVYEYV 105
             L+H N+VRL     E     L+++ V
Sbjct: 65  RLLKHPNIVRLHDSISEEGHHYLIFDLV 92

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 40.4 bits (95), Expect = 6e-05
 Identities = 21/107 (19%), Positives = 44/107 (41%), Gaps = 8/107 (7%)

Query: 5   VAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKR 58
           V    A    + +     D    +  ++ F  +++LG G   ++        +   A+K 
Sbjct: 26  VTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKV 85

Query: 59  LSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV 105
           L ++  +  + +  E+ V+ +L H N+++L        E  LV E V
Sbjct: 86  LKKTVDK--KIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV 130

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 40.5 bits (95), Expect = 6e-05
 Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 9/80 (11%)

Query: 33  KFSTDNKLGEGGFGV-----LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLV 86
            F   + LG G  G      + +  ++AVKR+       A     EV ++ +  +H N++
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFAD---REVQLLRESDEHPNVI 81

Query: 87  RLLGFCLEREEKILVYEYVP 106
           R      +R+ + +  E   
Sbjct: 82  RYFCTEKDRQFQYIAIELCA 101

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 40.4 bits (95), Expect = 6e-05
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 21/100 (21%)

Query: 23  DFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGA-QEINNEVV 75
           DFE I+           LG GGFGV        ++   A+KR+   + + A +++  EV 
Sbjct: 6   DFEPIQ----------CLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK 55

Query: 76  VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
            +AKL+H  +VR     LE+       E +       +LY
Sbjct: 56  ALAKLEHPGIVRYFNAWLEKNT----TEKLQPSSPKVYLY 91

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 40.5 bits (95), Expect = 7e-05
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 11/87 (12%)

Query: 37  DNKLGEGGFGVL----PNEHEIAVKRL-SRSSSQGAQEINNEVVVVAKLQHINLVRLLGF 91
              +G+G FG +        E+AVK   SR      +E   E+     L+H N++  +  
Sbjct: 47  QESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAA 104

Query: 92  CLEREEKI----LVYEYVPNKRLDNFL 114
             +         LV +Y  +  L ++L
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYL 131

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 40.1 bits (94), Expect = 9e-05
 Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 9/83 (10%)

Query: 32  NKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHIN 84
             +S   ++G GG   +       +   A+K ++     +Q      NE+  + KLQ  +
Sbjct: 9   RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68

Query: 85  L--VRLLGFCLEREEKILVYEYV 105
              +RL  + +  +   +V E  
Sbjct: 69  DKIIRLYDYEITDQYIYMVMECG 91

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 40.1 bits (94), Expect = 9e-05
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 16/88 (18%)

Query: 31  TNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHIN 84
              ++    +G G FGV        +   +A+K++     Q  +  N E+ ++ KL H N
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCN 108

Query: 85  LVRLLGFCLEREEKI------LVYEYVP 106
           +VRL  F     EK       LV +YVP
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVP 136

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 9/91 (9%)

Query: 23  DFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLS---RSSSQGAQEINNE 73
           +    +D    FS   ++G G FG       + N   +A+K++S   + S++  Q+I  E
Sbjct: 45  ELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 104

Query: 74  VVVVAKLQHINLVRLLGFCLEREEKILVYEY 104
           V  + KL+H N ++  G  L      LV EY
Sbjct: 105 VRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 14/88 (15%), Positives = 34/88 (38%), Gaps = 13/88 (14%)

Query: 37  DNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVV--VAKLQHINLVRLLG 90
             ++G+G +G +        ++AVK      +        E  +     ++H N++  + 
Sbjct: 42  VKQIGKGRYGEVWMGKWRGEKVAVKVFF---TTEEASWFRETEIYQTVLMRHENILGFIA 98

Query: 91  FCLEREEKI----LVYEYVPNKRLDNFL 114
             ++         L+ +Y  N  L ++L
Sbjct: 99  ADIKGTGSWTQLYLITDYHENGSLYDYL 126

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 39.4 bits (92), Expect = 1e-04
 Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 9/83 (10%)

Query: 32  NKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHIN 84
             +S   ++G GG   +       +   A+K ++     +Q      NE+  + KLQ  +
Sbjct: 56  RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115

Query: 85  L--VRLLGFCLEREEKILVYEYV 105
              +RL  + +  +   +V E  
Sbjct: 116 DKIIRLYDYEITDQYIYMVMECG 138

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 19/97 (19%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGA-------------Q 68
                 +    KLG G +G            E A+K + +S                  +
Sbjct: 32  GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHE 91

Query: 69  EINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV 105
           EI NE+ ++  L H N+++L     +++   LV E+ 
Sbjct: 92  EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFY 128

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 11/86 (12%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQH 82
           + F     LG+G FG         N+  +A+K L +S         ++  E+ + + L+H
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73

Query: 83  INLVRLLGFCLEREEKI-LVYEYVPN 107
            N++R+  +     ++I L+ E+ P 
Sbjct: 74  PNILRMYNY-FHDRKRIYLMLEFAPR 98

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 17/96 (17%), Positives = 38/96 (39%), Gaps = 7/96 (7%)

Query: 16  TLESLQFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGA-Q 68
               L        D    F+   K+G+G FG          +  +A+K +    ++   +
Sbjct: 6   VQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE 65

Query: 69  EINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY 104
           +I  E+ V+++     + +  G  L+  +  ++ EY
Sbjct: 66  DIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 16/81 (19%)

Query: 40  LGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINN------EVVVVAKLQHI--NL 85
           LG GGFG       + +   +A+K + +       E+ N      EVV++ K+      +
Sbjct: 51  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110

Query: 86  VRLLGFCLEREEKI-LVYEYV 105
           +RLL +  ER +   L+ E  
Sbjct: 111 IRLLDW-FERPDSFVLILERP 130

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 9/84 (10%)

Query: 28  EDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-Q 81
           +   N   ++  LG G  G +          +AVKR+       A     E+ ++ +   
Sbjct: 11  QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTESDD 67

Query: 82  HINLVRLLGFCLEREEKILVYEYV 105
           H N++R            +  E  
Sbjct: 68  HPNVIRYYCSETTDRFLYIALELC 91

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 38.4 bits (89), Expect = 4e-04
 Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 10/92 (10%)

Query: 23  DFETIEDATNKFSTDNKLGEG--GFGV------LPNEHEIAVKR--LSRSSSQGAQEINN 72
              +       +     +G+G             P    + V+R  L   S++    +  
Sbjct: 16  GMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQG 75

Query: 73  EVVVVAKLQHINLVRLLGFCLEREEKILVYEY 104
           E+ V     H N+V      +   E  +V  +
Sbjct: 76  ELHVSKLFNHPNIVPYRATFIADNELWVVTSF 107

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 12/102 (11%)

Query: 40  LGEGGFGV------LPNEHEIAVKRLSRSS----SQGAQEINNEVVVVAKLQHINLVRLL 89
           LGEG +G              AVK L +        G   +  E+ ++ +L+H N+++L+
Sbjct: 13  LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72

Query: 90  G-FCLEREEKI-LVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
                E ++K+ +V EY      +     PEK+     +  Y
Sbjct: 73  DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGY 114

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 7/75 (9%)

Query: 40  LGEGGFGV------LPNEHEIAVKRLSRSSSQGAQE-INNEVVVVAKLQHINLVRLLGFC 92
           LGEG +G          E  +AVK +    +    E I  E+ +   L H N+V+  G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74

Query: 93  LEREEKILVYEYVPN 107
            E   + L  EY   
Sbjct: 75  REGNIQYLFLEYCSG 89

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 8/88 (9%)

Query: 23  DFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVV 76
           +    +     F    KLGEG +G             +A+K++        QEI  E+ +
Sbjct: 20  EDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEISI 77

Query: 77  VAKLQHINLVRLLGFCLEREEKILVYEY 104
           + +    ++V+  G   +  +  +V EY
Sbjct: 78  MQQCDSPHVVKYYGSYFKNTDLWIVMEY 105

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 37.6 bits (88), Expect = 6e-04
 Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 10/101 (9%)

Query: 15  TTLESLQFDFETIEDATNKFS-TDNKLGEGGFGV------LPNEHEIAVK--RLSRSSSQ 65
             L +    F+++E+  N +  T  +LG G F V           E A K  +  R    
Sbjct: 11  VDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD 70

Query: 66  GAQEINNEVVVVAKLQHI-NLVRLLGFCLEREEKILVYEYV 105
              EI +E+ V+   +    ++ L        E IL+ EY 
Sbjct: 71  CRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYA 111

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 37.4 bits (87), Expect = 7e-04
 Identities = 15/93 (16%), Positives = 38/93 (40%), Gaps = 15/93 (16%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRS--------SSQGAQEINNE 73
           +   +++     LG G  G            ++A++ +S+          +  A  +  E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190

Query: 74  VVVVAKLQHINLVRLLGFCLEREEKILVYEYVP 106
           + ++ KL H  ++++  F  + E+  +V E + 
Sbjct: 191 IEILKKLNHPCIIKIKNFF-DAEDYYIVLELME 222

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 37.3 bits (87), Expect = 9e-04
 Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 15/93 (16%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQE--------INNE 73
           +   +++     LG G  G            ++A+K +S+                +  E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65

Query: 74  VVVVAKLQHINLVRLLGFCLEREEKILVYEYVP 106
           + ++ KL H  ++++  F  + E+  +V E + 
Sbjct: 66  IEILKKLNHPCIIKIKNFF-DAEDYYIVLELME 97

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	146
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.89
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.89
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.88
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.88
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.87
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.86
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.86
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.86
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.85
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.85
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.84
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.83
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.83
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.83
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.82
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.81
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.78
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.76
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.74
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.74
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.73
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.73
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.73
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.72
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.72
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.71
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.71
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.71
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.7
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.7
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.7
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.7
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.7
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.7
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.69
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.69
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.69
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.69
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.68
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.68
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.68
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.68
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.68
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.68
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.68
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.68
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.67
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.67
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.67
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.67
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.67
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.67
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.67
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.67
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.67
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.66
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.66
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.66
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.66
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.66
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.66
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.66
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.66
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.66
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.66
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.66
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.66
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.65
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.65
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.65
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.65
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.65
3uqc_A	286	Probable conserved transmembrane protein; structur	99.65
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.65
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.65
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.65
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.65
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.65
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.65
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.64
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.64
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.64
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.64
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.64
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.64
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.64
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.64
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.64
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.64
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.63
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.63
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.63
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.63
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.63
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.63
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.63
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.63
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.63
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.63
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.63
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.63
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.63
3bhy_A	283	Death-associated protein kinase 3; death associate	99.63
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.62
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.62
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.62
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.62
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.62
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.62
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.62
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.62
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.62
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.61
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.61
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.61
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.61
3niz_A	311	Rhodanese family protein; structural genomics, str	99.61
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.61
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.61
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.61
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.61
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.61
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.61
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.61
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.61
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.61
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.61
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.6
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.6
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.6
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.6
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.6
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.6
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.6
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.6
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.6
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.6
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.6
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.6
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.6
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.6
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.59
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.59
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.59
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.59
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.59
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.59
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.59
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.59
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.59
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.59
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.59
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.59
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.58
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.58
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.58
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.58
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.58
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.58
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.58
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.58
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.58
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.57
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.57
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.57
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.57
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.57
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.57
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.57
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.57
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.57
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.56
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.56
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.56
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.56
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.56
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.56
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.56
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.55
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.55
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.55
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.55
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.55
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.55
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.55
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.55
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.55
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.55
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.55
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.55
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.55
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.54
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.54
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.54
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.54
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.54
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.54
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.54
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.54
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.54
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.54
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.53
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.53
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.53
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.52
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.52
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.51
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.51
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.51
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.51
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.51
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.51
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.51
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.5
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.5
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.49
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.49
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.48
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.47
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.47
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.47
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.47
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.47
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.47
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.47
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.46
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.46
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.46
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.45
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.45
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.45
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.44
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.44
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.44
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.43
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.43
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.41
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.41
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.41
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.4
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.39
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.39
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.38
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.38
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.37
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.37
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.36
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.36
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.31
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.29
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.28
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.17
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.72
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.7
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.37
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.11
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.73
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.5
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.37
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	95.6
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	93.89
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	93.31
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	93.23
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	93.19
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	90.86
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	88.76
3ats_A	357	Putative uncharacterized protein; hypothetical pro	86.15

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.89  E-value=5.5e-23  Score=140.80  Aligned_cols=113  Identities=25%  Similarity=0.409  Sum_probs=95.4

Q ss_pred             HccCcccceeecccCceeecC-----------CcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           30 ATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      ..++|.+.+.||+|+||.|+.           +..||+|.+........+.+.+|+.+|.+++||||+++++++...+.+
T Consensus        11 ~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~   90 (299)
T 4asz_A           11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   90 (299)
T ss_dssp             CGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred             CHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence            346788999999999999932           457999999765555577899999999999999999999999999999


Q ss_pred             eEEEEecCCCCHHHhhcCCC----------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPE----------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|||||++|+|.++|....          ....+++..+..++.||+.||.|.
T Consensus        91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL  144 (299)
T 4asz_A           91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL  144 (299)
T ss_dssp             EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999996421          234689999999999999999874

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.89  E-value=2.2e-22  Score=139.50  Aligned_cols=112  Identities=25%  Similarity=0.401  Sum_probs=96.8

Q ss_pred             ccCcccceeecccCceeecC-----------CcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           31 TNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      .+++.+.+.||+|+||.|+.           +..||+|.+........+.|.+|+.+|.+++||||++++++|...+.++
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~  119 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL  119 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            46788889999999999942           4579999997655555778999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCCC------------CCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEK------------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|||||++|+|.+++.....            ...++|..+..++.||+.||.|.
T Consensus       120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL  174 (329)
T 4aoj_A          120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL  174 (329)
T ss_dssp             EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999975321            24589999999999999999874

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.88  E-value=4.7e-22  Score=138.45  Aligned_cols=110  Identities=21%  Similarity=0.246  Sum_probs=89.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ++|.+.+.||+|+||.|      ..|..+|+|.+....  ......+.+|+.++..++||||+++++++.+.+.+++|||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            68999999999999998      457899999997543  2235678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||++|+|.++|... ....+++..+..++.||+.||.|.
T Consensus       104 y~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~yl  141 (350)
T 4b9d_A          104 YCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHV  141 (350)
T ss_dssp             CCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999652 344578999999999999999874

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.88  E-value=5.5e-22  Score=136.33  Aligned_cols=112  Identities=21%  Similarity=0.316  Sum_probs=93.4

Q ss_pred             ccCcccceeecccCceeecC-----------CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           31 TNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      .+++++.+.||+|+||.|+.           +..||+|.+.... ....+.|.+|+.++.+++||||++++++|...+.+
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  104 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL  104 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence            35677889999999999943           3469999986432 23467899999999999999999999999999999


Q ss_pred             eEEEEecCCCCHHHhhcCCCC-------------CCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEK-------------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|||||++|+|.++|.....             ...+++..+..++.||+.||.|.
T Consensus       105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL  161 (308)
T 4gt4_A          105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL  161 (308)
T ss_dssp             EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999964321             23589999999999999999874

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.87  E-value=6.2e-22  Score=137.67  Aligned_cols=107  Identities=21%  Similarity=0.262  Sum_probs=95.2

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      +.|...+.||+|+||.|      ..|..+|+|.+..........+.+|+.+|..++||||+++++++...+.++||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            56999999999999999      467899999997554445667889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|+|.+++.+    ..+++..+..++.||+.||.|.
T Consensus       154 ~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~yl  186 (346)
T 4fih_A          154 EGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVL  186 (346)
T ss_dssp             TTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999864    3489999999999999999874

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.86  E-value=1.3e-21  Score=139.11  Aligned_cols=108  Identities=21%  Similarity=0.259  Sum_probs=96.4

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      .+.|...+.||+|+||.|      ..|..||+|.+..........+.+|+.+|..++||||+++++++...+.+||||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            356999999999999999      45789999999766555567789999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |++|+|.+++..    ..+++..+..++.||+.||.|.
T Consensus       230 ~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~yl  263 (423)
T 4fie_A          230 LEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVL  263 (423)
T ss_dssp             CTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999854    2489999999999999999873

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.86  E-value=1.8e-21  Score=133.52  Aligned_cols=114  Identities=19%  Similarity=0.319  Sum_probs=95.2

Q ss_pred             HHHHHccCcccceeecccCceeecC---CcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVLPN---EHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v~~---~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      .|++..+++.+.+.||+|+||.|+.   ...+|+|+++...  ......+.+|+.++.+++||||+++++++. .+.+++
T Consensus        30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~i  108 (307)
T 3omv_A           30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAI  108 (307)
T ss_dssp             CCBCCTTSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             CcEEcHHHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEE
Confidence            4566678899999999999999943   3469999986432  233577999999999999999999999874 567899


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||||++|+|.+++...  ...+++..+..++.||+.||.|.
T Consensus       109 VmEy~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yL  148 (307)
T 3omv_A          109 VTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYL  148 (307)
T ss_dssp             EEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999653  34589999999999999999873

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.86  E-value=9.7e-22  Score=134.90  Aligned_cols=108  Identities=20%  Similarity=0.252  Sum_probs=95.3

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|.+.+.||+|+||.|      ..|..+|+|++...   .......+.+|+.++..++||||+++++++.+.+.+++||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            57999999999999999      46789999999643   2234677899999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++.+   ...+++..+..++.||+.||.|.
T Consensus       112 Ey~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~yl  148 (311)
T 4aw0_A          112 SYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL  148 (311)
T ss_dssp             CCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999965   34589999999999999999874

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.85  E-value=9e-21  Score=129.87  Aligned_cols=111  Identities=22%  Similarity=0.309  Sum_probs=89.8

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC--------
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLERE--------   96 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~--------   96 (146)
                      ++|...+.||+|+||.|      ..|..+|+|.+..... ...+.+.+|+.+|..++||||+++++++...+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            46889999999999999      4578999999975433 23567889999999999999999999987544        


Q ss_pred             ----ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 ----EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                          .++++||||++|+|.+++.........++..+..++.|++.||.|.
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~yl  134 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFL  134 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHH
Confidence                3789999999999999997644444456677889999999999873

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.85  E-value=8.4e-21  Score=132.60  Aligned_cols=123  Identities=19%  Similarity=0.311  Sum_probs=99.5

Q ss_pred             cccChhHHHHHccCcccceeecccCceeecCC-----------cEEEEEEeccCCc-ccHHHHHHHHHHHhhCCC-CCee
Q 048150           20 LQFDFETIEDATNKFSTDNKLGEGGFGVLPNE-----------HEIAVKRLSRSSS-QGAQEINNEVVVVAKLQH-INLV   86 (146)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~lg~g~fg~v~~~-----------~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h-~~i~   86 (146)
                      ..+....|+++.++|++.+.||+|+||.|+.+           ..||+|.+..... .....+.+|+.+|..+.| |||+
T Consensus        52 lp~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV  131 (353)
T 4ase_A           52 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV  131 (353)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CCCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEE
Confidence            34455678888999999999999999999432           3699999865432 235678999999999965 8999


Q ss_pred             eEeeEEEcC-CceeEEEEecCCCCHHHhhcCCCC-------------CCCCChHHHHHHHHHHHHHHhhh
Q 048150           87 RLLGFCLER-EEKILVYEYVPNKRLDNFLYEPEK-------------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        87 ~l~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++|..+ +.+++|||||++|+|.++|+....             ...+++..+..++.||+.||.|.
T Consensus       132 ~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yL  201 (353)
T 4ase_A          132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL  201 (353)
T ss_dssp             CEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhH
Confidence            999998764 568999999999999999974221             23478999999999999999873

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.84  E-value=2.8e-20  Score=125.92  Aligned_cols=106  Identities=19%  Similarity=0.358  Sum_probs=88.6

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .+|++.+.||+|+||.|      ..|..+|+|.+....   ......+.+|+.++..++||||+++++++.+.+.+++||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            68999999999999998      457899999996542   233567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+ +|+|.+.+.+   ...+++..+..++.|++.||.|
T Consensus        93 Ey~-~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~y  127 (275)
T 3hyh_A           93 EYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEY  127 (275)
T ss_dssp             ECC-CEEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHH
T ss_pred             eCC-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHH
Confidence            999 5799999865   3458999999999999999987

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.83  E-value=1.4e-20  Score=130.44  Aligned_cols=105  Identities=19%  Similarity=0.215  Sum_probs=91.0

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      .+.|...+.||+|+||.|      ..|..||+|.++....     ..+|+.++..++||||+++++++.+.+.++|||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            356888899999999999      4578999999975432     23699999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      |++|+|.+++.+   ...+++..+..++.||+.||.|.|
T Consensus       132 ~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH  167 (336)
T 4g3f_A          132 LEGGSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLH  167 (336)
T ss_dssp             CTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999965   335899999999999999998743

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.83  E-value=3.3e-21  Score=132.09  Aligned_cols=108  Identities=15%  Similarity=0.154  Sum_probs=87.9

Q ss_pred             cCcccceeecccCceeec---------CCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           32 NKFSTDNKLGEGGFGVLP---------NEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~---------~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ++|++.+.||+|+||.|+         .+..+|+|.+....  ......+.+|+.++..++||||+++++++.+.+.+++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            579999999999999993         35679999986432  2224467889999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||||++|+|.+++.+   ...+++..+..++.|++.||.|.
T Consensus       104 vmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~yl  142 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHL  142 (304)
T ss_dssp             EECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999965   34589999999999999999874

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.83  E-value=4.4e-20  Score=125.83  Aligned_cols=106  Identities=19%  Similarity=0.188  Sum_probs=88.9

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc----CCceeEE
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLE----REEKILV  101 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~----~~~~~lv  101 (146)
                      ++..+.||+|+||.|      ..+..+|+|.+...  .......+.+|+.++..++||||+++++++..    .+.+++|
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            467788999999999      45678999998643  22235678999999999999999999999865    3458999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||||++|+|.+++.+   ...+++..+..++.||+.||.|.
T Consensus       108 mEy~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~yl  145 (290)
T 3fpq_A          108 TELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFL  145 (290)
T ss_dssp             EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999964   34589999999999999999875

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.82  E-value=1.4e-19  Score=133.60  Aligned_cols=109  Identities=17%  Similarity=0.324  Sum_probs=96.6

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      ++|.+.+.||+|+||.|      ..|..+|+|.+..........+.+|+.+|..++||||+++++++...+.++++||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            57999999999999998      467899999997655555677889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|+|.+++.+.  ...+++..+..++.||+.||.|.
T Consensus       237 ~gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~yl  271 (573)
T 3uto_A          237 SGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHM  271 (573)
T ss_dssp             CCCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999998652  34589999999999999999873

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.81  E-value=1.1e-19  Score=124.74  Aligned_cols=106  Identities=18%  Similarity=0.210  Sum_probs=86.3

Q ss_pred             ccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHH--HHHHHHhhCCCCCeeeEeeEEEcCC----ceeE
Q 048150           31 TNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEIN--NEVVVVAKLQHINLVRLLGFCLERE----EKIL  100 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~l~~~~~~~~----~~~l  100 (146)
                      .++|.+.+.||+|+||.|    ..|..||+|.+...   ....+.  .|+..+..++||||+++++++...+    .++|
T Consensus         2 ar~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l   78 (303)
T 3hmm_A            2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence            356888999999999999    56789999998532   233333  4555667789999999999998654    4799


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      ||||+++|+|.+++..    ..+++..+..++.|++.||.|.|
T Consensus        79 V~Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH  117 (303)
T 3hmm_A           79 VSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLH  117 (303)
T ss_dssp             EEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999964    24889999999999999998864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.78  E-value=1.8e-18  Score=122.60  Aligned_cols=107  Identities=12%  Similarity=0.237  Sum_probs=90.1

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC------Cc
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLER------EE   97 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~------~~   97 (146)
                      ++|.+.+.||+|+||.|      ..|..||+|.+....  ......+.+|+.+|..++||||+++++++...      +.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            57999999999999999      467899999996442  22356688999999999999999999987643      56


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||||++ |+|.+++.+   ...+++..+..++.||+.||.|.
T Consensus       134 ~~ivmE~~~-g~L~~~i~~---~~~l~~~~~~~~~~qil~al~yl  174 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYM  174 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTS---SSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            899999996 689999865   34589999999999999999873

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.76  E-value=8.4e-18  Score=117.88  Aligned_cols=107  Identities=17%  Similarity=0.229  Sum_probs=91.8

Q ss_pred             HHHccCcccceeecccCceeec---------CCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCc
Q 048150           28 EDATNKFSTDNKLGEGGFGVLP---------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREE   97 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v~---------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~   97 (146)
                      ....+.|++.+.||+|+||.|+         .+..+|+|.+...  .....+.+|+.++..+ +||||+++++++...+.
T Consensus        17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~   94 (361)
T 4f9c_A           17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH   94 (361)
T ss_dssp             GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred             CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence            3456789999999999999992         2457999998643  3456678999999988 69999999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||||+++|+|.+++.      .+++..+..++.|++.||.|.
T Consensus        95 ~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~yl  133 (361)
T 4f9c_A           95 VVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRI  133 (361)
T ss_dssp             EEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999984      278999999999999999873

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.74  E-value=6.4e-18  Score=125.78  Aligned_cols=109  Identities=17%  Similarity=0.171  Sum_probs=89.6

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHH---HHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINN---EVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~---e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ++|.+.++||+|+||.|      ..|..+|+|++....   .........   ++.++..++||||+++++++.+.+.++
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            67999999999999999      468899999996421   112223333   356677789999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      +||||++||+|.++|.+   ...+++..+..++.||+.||.|.|
T Consensus       269 lVmEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH  309 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMH  309 (689)
T ss_dssp             EEECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999965   345899999999999999998743

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.74  E-value=2.1e-17  Score=113.95  Aligned_cols=129  Identities=33%  Similarity=0.545  Sum_probs=106.0

Q ss_pred             cccccccccChhHHHHHccCcccceeecccCceee-----cCCcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeee
Q 048150           14 ITTLESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVR   87 (146)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~   87 (146)
                      ........++..++....++|...+.||+|+||.|     ..+..+|+|.+...... ....+.+|+.++..+.|+||++
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   91 (326)
T 3uim_A           12 VHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR   91 (326)
T ss_dssp             ---CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCC
T ss_pred             cccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccc
Confidence            33444567888999999999999999999999998     35778999998654221 2336889999999999999999


Q ss_pred             EeeEEEcCCceeEEEEecCCCCHHHhhcCCC-CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           88 LLGFCLEREEKILVYEYVPNKRLDNFLYEPE-KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        88 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++...+..++++||+++|+|.+++.... ....+++..+..++.|++.||.|.
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l  147 (326)
T 3uim_A           92 LRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYL  147 (326)
T ss_dssp             CCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999997643 244589999999999999999873

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.73  E-value=5.7e-17  Score=111.18  Aligned_cols=110  Identities=19%  Similarity=0.301  Sum_probs=96.5

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      .++|...+.||+|+||.|      ..+..+++|.+..........+.+|+.++..++||||+++++++...+..++++||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            467889999999999998      35778999998665555677899999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus        89 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~l  124 (310)
T 3s95_A           89 IKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYL  124 (310)
T ss_dssp             CTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999752  34589999999999999999873

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.73  E-value=1.2e-17  Score=114.76  Aligned_cols=118  Identities=22%  Similarity=0.331  Sum_probs=98.2

Q ss_pred             hHHHHHccCcccceeecccCceee----cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      ..+.....+|.+.+.||+|+||.|    ..+..+|+|.+.....  .....+.+|+.++..++|+||+++++++...+..
T Consensus        30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  109 (309)
T 3p86_A           30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL  109 (309)
T ss_dssp             --CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred             ccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence            444556678999999999999998    4677899999865432  2346788999999999999999999999999999


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++|+|.+++........+++..+..++.|++.||.|.
T Consensus       110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~L  153 (309)
T 3p86_A          110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL  153 (309)
T ss_dssp             EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999997643333488999999999999999874

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.73  E-value=2.1e-17  Score=113.84  Aligned_cols=123  Identities=33%  Similarity=0.528  Sum_probs=102.7

Q ss_pred             cccChhHHHHHccCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc
Q 048150           20 LQFDFETIEDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLE   94 (146)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~   94 (146)
                      ..+++.++....++|...+.||+|+||.|     ..+..+|+|.+..........+.+|+.++..++|||++++++++..
T Consensus        27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  106 (321)
T 2qkw_B           27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE  106 (321)
T ss_dssp             ---CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred             eeecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence            34455566667789999999999999998     3478899999876655557788999999999999999999999998


Q ss_pred             CCceeEEEEecCCCCHHHhhcCCCC-CCCCChHHHHHHHHHHHHHHhhh
Q 048150           95 REEKILVYEYVPNKRLDNFLYEPEK-QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        95 ~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+..++++||+++|+|.+++..... ...+++..+..++.|++.||.|.
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l  155 (321)
T 2qkw_B          107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL  155 (321)
T ss_dssp             TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHh
Confidence            8999999999999999999975322 33588999999999999999873

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.72  E-value=2.1e-16  Score=108.09  Aligned_cols=125  Identities=36%  Similarity=0.522  Sum_probs=106.2

Q ss_pred             cccccChhHHHHHccCcccc------eeecccCceee----cCCcEEEEEEeccCC----cccHHHHHHHHHHHhhCCCC
Q 048150           18 ESLQFDFETIEDATNKFSTD------NKLGEGGFGVL----PNEHEIAVKRLSRSS----SQGAQEINNEVVVVAKLQHI   83 (146)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~------~~lg~g~fg~v----~~~~~~a~k~~~~~~----~~~~~~~~~e~~~l~~l~h~   83 (146)
                      ....+++.++...+.+|...      +.||+|+||.|    ..+..+++|.+....    ......+.+|+.++..++||
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   90 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE   90 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence            34677888999998888877      89999999998    467789999986432    22356788999999999999


Q ss_pred             CeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           84 NLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        84 ~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |++++++++...+..++++||+++|+|.+++........+++..+..++.|++.||.|.
T Consensus        91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~l  149 (307)
T 2nru_A           91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL  149 (307)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999998899999999999999999997644455689999999999999999874

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.72  E-value=1.6e-16  Score=109.65  Aligned_cols=121  Identities=21%  Similarity=0.263  Sum_probs=100.8

Q ss_pred             cccccChhHHHHHccC----------cccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC
Q 048150           18 ESLQFDFETIEDATNK----------FSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ   81 (146)
Q Consensus        18 ~~~~~~~~~~~~~~~~----------~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~   81 (146)
                      .+..++++++....+.          |...+.||+|+||.|      ..|..+|+|.+..........+.+|+.++..++
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~  100 (321)
T 2c30_A           21 QSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ  100 (321)
T ss_dssp             ----CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCC
T ss_pred             cCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCC
Confidence            4456777777665543          677789999999998      367899999997665556778899999999999


Q ss_pred             CCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           82 HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        82 h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+|++++++++...+..+++|||+++|+|.+++..    ..+++..+..++.|++.||.|.
T Consensus       101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~L  157 (321)
T 2c30_A          101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYL  157 (321)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999854    2488999999999999999873

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.71  E-value=1.6e-16  Score=108.54  Aligned_cols=109  Identities=20%  Similarity=0.279  Sum_probs=95.6

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ...+|...+.||+|+||.|      ..+..+|+|.+..........+.+|+.++..++||||+++++++...+..+++||
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            4567999999999999998      4567899999875544556778899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++|+|.+++..    ..+++..+..++.|++.||.|.
T Consensus        98 ~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~l  132 (297)
T 3fxz_A           98 YLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFL  132 (297)
T ss_dssp             CCTTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999864    2488899999999999999873

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.71  E-value=8.6e-17  Score=108.00  Aligned_cols=112  Identities=23%  Similarity=0.247  Sum_probs=94.4

Q ss_pred             HccCcccceeecccCceee----cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--CceeEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLER--EEKILV  101 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~~~lv  101 (146)
                      ..++|...+.||+|+||.|    ..+..+|+|.+....  ......+.+|+.++..++||||+++++++...  +..+++
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A            8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             CHHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            3467899999999999998    457789999987543  22356788999999999999999999999876  778999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus        88 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~l  127 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFL  127 (271)
T ss_dssp             EECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ecccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999763 233589999999999999999763

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.71  E-value=2.9e-16  Score=110.13  Aligned_cols=110  Identities=21%  Similarity=0.315  Sum_probs=95.2

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcc------cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ------GAQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      ..+.|.+.+.||+|+||.|      ..|..+|+|.+......      ....+.+|+.++..+.||||+++++++...+.
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            4467999999999999998      35788999999754221      35678999999999999999999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++|||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        90 ~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~L  131 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYL  131 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999964   34589999999999999999874

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.70  E-value=8.1e-17  Score=111.58  Aligned_cols=111  Identities=17%  Similarity=0.281  Sum_probs=95.6

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ....+|.+.+.||+|+||.|      ..|..+|+|.+...  .......+.+|+.++..++||||+++++++...+.+++
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l   91 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL   91 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence            34578999999999999998      46789999998643  22345678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        92 v~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~l  130 (328)
T 3fe3_A           92 IMEYASGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYC  130 (328)
T ss_dssp             EECCCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999864   23488999999999999999873

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.70  E-value=2.4e-16  Score=108.64  Aligned_cols=112  Identities=20%  Similarity=0.285  Sum_probs=91.8

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC-------
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLERE-------   96 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~-------   96 (146)
                      .++|...+.||+|+||.|      ..+..+|+|.+..... .....+.+|+.++..++||||+++++++...+       
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            356889999999999998      3678899999975432 34577899999999999999999999886543       


Q ss_pred             --------------------------------------------------ceeEEEEecCCCCHHHhhcCCCCCCCCChH
Q 048150           97 --------------------------------------------------EKILVYEYVPNKRLDNFLYEPEKQGQWDCS  126 (146)
Q Consensus        97 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~  126 (146)
                                                                        ..+++|||+++|+|.+++.........++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                              279999999999999999875544556677


Q ss_pred             HHHHHHHHHHHHHhhh
Q 048150          127 RRYKIIGGRGRDCSRN  142 (146)
Q Consensus       127 ~~~~i~~~i~~~l~~~  142 (146)
                      .+..++.|++.||.|.
T Consensus       165 ~~~~i~~qi~~aL~~L  180 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFL  180 (332)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            7899999999999873

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.70  E-value=6.3e-17  Score=117.65  Aligned_cols=117  Identities=21%  Similarity=0.327  Sum_probs=99.2

Q ss_pred             hhHHHHHccCcccceeecccCceeec------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           24 FETIEDATNKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        24 ~~~~~~~~~~~~~~~~lg~g~fg~v~------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      +..|....++|...+.||+|+||.|+      .+..+|+|.+... ......+.+|+.++..++|+||+++++++...+.
T Consensus       212 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~  290 (495)
T 1opk_A          212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP  290 (495)
T ss_dssp             SSCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ccccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence            34556667789999999999999983      3678999998643 2356789999999999999999999999998899


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++|||+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus       291 ~~lv~E~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~L  334 (495)
T 1opk_A          291 FYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYL  334 (495)
T ss_dssp             CEEEEECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999753 234588999999999999999873

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.70  E-value=3.3e-16  Score=107.78  Aligned_cols=112  Identities=21%  Similarity=0.243  Sum_probs=94.7

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC--ceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLERE--EKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~--~~~lv  101 (146)
                      ..+|.+.+.||+|+||.|      ..+..+|+|.+.... ......+.+|+.++..++|+|++++++++...+  ..+++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            467899999999999998      347789999986432 234677889999999999999999999988655  68999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+++|+|.+++........+++..+..++.|++.||.|.
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~L  128 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL  128 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999998754444589999999999999999863

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.70  E-value=3.5e-16  Score=110.63  Aligned_cols=110  Identities=15%  Similarity=0.252  Sum_probs=95.6

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      .++|.+.+.||+|+||.|      ..+..+|+|.+..........+.+|+.++..++|+||+++++++...+.++++|||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            367999999999999998      35778999998765444556788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus       130 ~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~L  165 (387)
T 1kob_A          130 LSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHM  165 (387)
T ss_dssp             CCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999998652  33589999999999999999874

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.70  E-value=9.6e-17  Score=115.46  Aligned_cols=114  Identities=23%  Similarity=0.275  Sum_probs=96.1

Q ss_pred             HHHHHccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC-ceeE
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLERE-EKIL  100 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~-~~~l  100 (146)
                      .|....++|...+.||+|+||.|    ..+..+|+|.+....  ....+.+|+.++..++|+|++++++++...+ .+++
T Consensus       187 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i  264 (450)
T 1k9a_A          187 GWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI  264 (450)
T ss_dssp             TCBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred             ccccChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence            34455678999999999999999    457789999996432  5678999999999999999999999987665 7899


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|||+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus       265 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~L  305 (450)
T 1k9a_A          265 VTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYL  305 (450)
T ss_dssp             EEECCTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999753 233478889999999999999873

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.69  E-value=2.8e-17  Score=115.75  Aligned_cols=116  Identities=18%  Similarity=0.322  Sum_probs=97.0

Q ss_pred             hHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      +.|....++|...+.||+|+||.|      ..+..+|+|.+..... .....+.+|+.++..++||||+++++++...+.
T Consensus       107 ~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  186 (377)
T 3cbl_A          107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP  186 (377)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             cccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCC
Confidence            455566678999999999999998      2577899999864322 223467899999999999999999999998889


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++|||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus       187 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~L  229 (377)
T 3cbl_A          187 IYIVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYL  229 (377)
T ss_dssp             CEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999752  23478899999999999999873

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=5.9e-16  Score=106.90  Aligned_cols=109  Identities=13%  Similarity=0.203  Sum_probs=93.9

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      .++|.+.+.||+|+||.|      ..+..+++|.+... ......+.+|+.++..++||||+++++++...+.++++|||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            467999999999999998      35678999998643 23456688999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus        83 ~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~l  118 (321)
T 1tki_A           83 ISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFL  118 (321)
T ss_dssp             CCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999652  33589999999999999999874

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.69  E-value=3.6e-16  Score=110.02  Aligned_cols=110  Identities=24%  Similarity=0.407  Sum_probs=93.6

Q ss_pred             ccCcccceeecccCceeec---------CCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           31 TNKFSTDNKLGEGGFGVLP---------NEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~---------~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ..+|...+.||+|+||.|+         .+..+|+|.+.... ......+.+|+.++..++|+||+++++++...+..++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            3578999999999999993         24469999986542 2335678999999999999999999999998899999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus       124 v~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~L  163 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYL  163 (373)
T ss_dssp             EEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999753  33588999999999999999874

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.68  E-value=4e-16  Score=107.86  Aligned_cols=110  Identities=22%  Similarity=0.404  Sum_probs=92.9

Q ss_pred             ccCcccceeecccCceeec---------CCcEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           31 TNKFSTDNKLGEGGFGVLP---------NEHEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~---------~~~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ..+|.+.+.||+|+||.|+         .+..+|+|.+... .......+.+|+.++..++|+||+++++++...+..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            3568899999999999983         2335999999754 22335678899999999999999999999998889999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus       128 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~L  167 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYL  167 (325)
T ss_dssp             EEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHH
T ss_pred             EeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999653  34589999999999999999873

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.68  E-value=2.1e-16  Score=107.20  Aligned_cols=110  Identities=21%  Similarity=0.312  Sum_probs=94.3

Q ss_pred             ccCcccceeecccCceeecCC-------------cEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           31 TNKFSTDNKLGEGGFGVLPNE-------------HEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~~-------------~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      .++|...+.||+|+||.|+.+             ..+++|.+..........+.+|+.++..++|+||+++++++...+.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            467899999999999998322             4689999865555567789999999999999999999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+++|||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~L  129 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFL  129 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999753  33388899999999999999873

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.68  E-value=2.4e-16  Score=109.95  Aligned_cols=100  Identities=24%  Similarity=0.470  Sum_probs=81.7

Q ss_pred             cccccChhHHHHHccCcccceeecccCceeecCC-----------cEEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCC
Q 048150           18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVLPNE-----------HEIAVKRLSRSSS-QGAQEINNEVVVVAKL-QHIN   84 (146)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~lg~g~fg~v~~~-----------~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l-~h~~   84 (146)
                      ....+....|....++|.+.+.||+|+||.|+.+           ..+|+|.+..... .....+.+|+.++..+ +|||
T Consensus         8 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpn   87 (359)
T 3vhe_A            8 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN   87 (359)
T ss_dssp             GGSCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTT
T ss_pred             hhCCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcc
Confidence            3445566778888899999999999999999433           5799999965422 2346788999999999 7899


Q ss_pred             eeeEeeEEEcCCc-eeEEEEecCCCCHHHhhcCC
Q 048150           85 LVRLLGFCLEREE-KILVYEYVPNKRLDNFLYEP  117 (146)
Q Consensus        85 i~~l~~~~~~~~~-~~lv~e~~~~g~L~~~l~~~  117 (146)
                      |+++++++...+. +++++||+++|+|.+++...
T Consensus        88 iv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~  121 (359)
T 3vhe_A           88 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK  121 (359)
T ss_dssp             BCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTT
T ss_pred             eeeeeeeeecCCCceEEEEEecCCCcHHHHHHhc
Confidence            9999999887554 89999999999999999763

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.68  E-value=1.2e-15  Score=105.48  Aligned_cols=109  Identities=21%  Similarity=0.331  Sum_probs=94.0

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcc------cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ------GAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      ...|...+.||+|+||.|      ..+..+|+|.+......      ....+.+|+.++..++|||++++++++...+..
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            356889999999999998      35788999998654221      357788999999999999999999999999999


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        90 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~l  130 (326)
T 2y0a_A           90 ILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYL  130 (326)
T ss_dssp             EEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999964   34589999999999999999874

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.68  E-value=2.5e-16  Score=109.50  Aligned_cols=109  Identities=19%  Similarity=0.132  Sum_probs=93.7

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      .++|...+.||+|+||.|      ..|..+|+|.+...   .......+..|+.++..++||+++++++++...+.++++
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            367899999999999998      35788999998643   123456788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        84 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~L  121 (337)
T 1o6l_A           84 MEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYL  121 (337)
T ss_dssp             EECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999864   23588999999999999999873

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.68  E-value=2.5e-16  Score=113.36  Aligned_cols=117  Identities=21%  Similarity=0.282  Sum_probs=98.0

Q ss_pred             ChhHHHHHccCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           23 DFETIEDATNKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        23 ~~~~~~~~~~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      ....|....++|.+.+.||+|+||.|+     .+..+|+|.+.... .....+.+|+.++..++||||+++++++. .+.
T Consensus       179 ~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~  256 (454)
T 1qcf_A          179 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEP  256 (454)
T ss_dssp             CTTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS
T ss_pred             cccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCc
Confidence            345677778899999999999999992     45679999996533 45788999999999999999999999875 667


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++|||+++|+|.+++.... ...+++..+..++.|++.||.|.
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~L  300 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFI  300 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHH
Confidence            899999999999999997532 22478889999999999999873

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.68  E-value=4.4e-16  Score=104.74  Aligned_cols=111  Identities=23%  Similarity=0.416  Sum_probs=95.0

Q ss_pred             HHccCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           29 DATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ...++|...+.||+|+||.|     ..+..+|+|.+.... .....+.+|+.++..++|||++++++++...+..+++||
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (269)
T 4hcu_A            7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE   85 (269)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             eChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence            34567899999999999998     356679999986433 345678999999999999999999999999899999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++++|.+++...  ...+++..+..++.|++.||.|.
T Consensus        86 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~l  122 (269)
T 4hcu_A           86 FMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYL  122 (269)
T ss_dssp             CCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHH
Confidence            99999999999653  33588999999999999999874

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.68  E-value=6.9e-16  Score=105.24  Aligned_cols=110  Identities=18%  Similarity=0.299  Sum_probs=94.3

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ..++|.+.+.||+|+||.|      ..+..+|+|.+....   ......+.+|+.++..++|||++++++++...+.+++
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l   88 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL   88 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred             hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence            3567999999999999998      356789999985432   2235678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|||+++++|.+++..   ...+++..+..++.|++.||.|.
T Consensus        89 v~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~l  127 (294)
T 4eqm_A           89 VMEYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHA  127 (294)
T ss_dssp             EEECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999964   23588999999999999999874

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.67  E-value=5.9e-16  Score=109.28  Aligned_cols=112  Identities=13%  Similarity=0.151  Sum_probs=95.5

Q ss_pred             HccCcccceeeccc--Cceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           30 ATNKFSTDNKLGEG--GFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        30 ~~~~~~~~~~lg~g--~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ...+|.+.+.||+|  +||.|      ..+..+|+|.+....  ......+.+|+.++..++|+||+++++++...+.++
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            45679999999999  99988      357889999996432  223566788999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||||+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus       103 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~L  144 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYI  144 (389)
T ss_dssp             EEEECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999753 234589999999999999999873

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.67  E-value=4.6e-16  Score=107.48  Aligned_cols=109  Identities=19%  Similarity=0.247  Sum_probs=91.6

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      .++|.+.+.||+|+||.|      ..+..+|+|.+..... .....+.+|+.++..++|+||+++++++...+..+++||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            468999999999999998      3577899999864432 224567899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        86 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~L  121 (323)
T 3tki_A           86 YCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYL  121 (323)
T ss_dssp             CCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999864   34588999999999999999863

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.67  E-value=9.3e-17  Score=115.16  Aligned_cols=116  Identities=14%  Similarity=0.097  Sum_probs=95.7

Q ss_pred             hHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLER   95 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~   95 (146)
                      .++....++|...+.||+|+||.|      ..+..+|+|.+....   ......+..|..++..+.|+||+++++++...
T Consensus        67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~  146 (437)
T 4aw2_A           67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD  146 (437)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred             hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence            344455678999999999999998      346789999986421   11223477899999999999999999999999


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +.+++||||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus       147 ~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~L  191 (437)
T 4aw2_A          147 NNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSV  191 (437)
T ss_dssp             SEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999752  34589999999999999999873

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.67  E-value=5.8e-16  Score=108.51  Aligned_cols=109  Identities=19%  Similarity=0.311  Sum_probs=94.2

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ...+|.+.+.||+|+||.|      ..+..+|+|.+.... .....+.+|+.++..++||||+++++++...+..+++||
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            3467999999999999988      467889999996532 234668899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        97 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~L  132 (361)
T 3uc3_A           97 YASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYC  132 (361)
T ss_dssp             CCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999864   23488999999999999999873

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.67  E-value=9.2e-16  Score=107.56  Aligned_cols=111  Identities=22%  Similarity=0.278  Sum_probs=95.0

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ...++|...+.||+|+||.|      ..+..+|+|.+.....  .....+.+|+.++..++||||+++++++...+..++
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  105 (362)
T 2bdw_A           26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL  105 (362)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            34567999999999999998      3577899999965432  235678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|||+++|+|.+.+..   ...+++..+..++.|++.||.|.
T Consensus       106 v~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~l  144 (362)
T 2bdw_A          106 VFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYC  144 (362)
T ss_dssp             EECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999998864   33588999999999999999873

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.67  E-value=6.6e-16  Score=109.39  Aligned_cols=112  Identities=21%  Similarity=0.243  Sum_probs=94.5

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC--ceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLERE--EKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~--~~~lv  101 (146)
                      ..+|.+.+.||+|+||.|      ..+..+|+|.+.... ......+.+|+.++..++|+||+++++++...+  ..+++
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            457899999999999998      347789999986432 234567889999999999999999999988655  68999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+++|+|.+++........+++..+..++.|++.||.|.
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L  128 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL  128 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999997654444589999999999999999863

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.67  E-value=4e-16  Score=105.56  Aligned_cols=116  Identities=23%  Similarity=0.386  Sum_probs=95.1

Q ss_pred             hhHHHHHccCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           24 FETIEDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        24 ~~~~~~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      +..|....++|...+.||+|+||.|     ..+..+|+|.+.... .....+.+|+.++..++|+|++++++++...+..
T Consensus        16 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   94 (283)
T 3gen_A           16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPI   94 (283)
T ss_dssp             CCTTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred             CCCccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCe
Confidence            3455566788999999999999998     345579999986443 2456788999999999999999999999988999


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|||+++++|.+++...  ...+++..+..++.|++.||.|.
T Consensus        95 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~l  136 (283)
T 3gen_A           95 FIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYL  136 (283)
T ss_dssp             EEEECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999752  33489999999999999999873

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.67  E-value=8.8e-17  Score=114.52  Aligned_cols=117  Identities=13%  Similarity=0.071  Sum_probs=96.6

Q ss_pred             hhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEc
Q 048150           24 FETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLE   94 (146)
Q Consensus        24 ~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~   94 (146)
                      ..++....++|...+.||+|+||.|      ..|..+|+|.+....   ......+..|..++..+.|++|+++++++..
T Consensus        53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  132 (412)
T 2vd5_A           53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD  132 (412)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence            3444555688999999999999998      457899999986421   1123447789999999999999999999999


Q ss_pred             CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           95 REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        95 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+.+++||||+++|+|.+++.+.  ...+++..+..++.|++.||.|.
T Consensus       133 ~~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~L  178 (412)
T 2vd5_A          133 ENYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSV  178 (412)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999652  23588999999999999999873

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.67  E-value=6e-16  Score=108.79  Aligned_cols=113  Identities=21%  Similarity=0.341  Sum_probs=93.4

Q ss_pred             HccCcccceeecccCceeecC-------------CcEEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCCeeeEeeEEEc
Q 048150           30 ATNKFSTDNKLGEGGFGVLPN-------------EHEIAVKRLSRSSS-QGAQEINNEVVVVAKL-QHINLVRLLGFCLE   94 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~~-------------~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~   94 (146)
                      ..++|.+.+.||+|+||.|+.             +..+|+|.+..... .....+.+|+.++..+ +||||+++++++..
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  158 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  158 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence            346789999999999999942             23599999865422 2356789999999999 89999999999999


Q ss_pred             CCceeEEEEecCCCCHHHhhcCCCC-------------CCCCChHHHHHHHHHHHHHHhhh
Q 048150           95 REEKILVYEYVPNKRLDNFLYEPEK-------------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        95 ~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+.++++|||+++|+|.+++.....             ...+++..+..++.|++.||.|.
T Consensus       159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  219 (370)
T 2psq_A          159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL  219 (370)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999975321             23478899999999999999874

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.66  E-value=5.4e-16  Score=109.17  Aligned_cols=105  Identities=21%  Similarity=0.305  Sum_probs=85.8

Q ss_pred             cceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCCCC
Q 048150           36 TDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKR  109 (146)
Q Consensus        36 ~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~g~  109 (146)
                      ..+.||+|+||.|      ..|..+|+|.+..........+.+|+.++..++|+||+++++++...+.++++|||+++|+
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~  172 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE  172 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence            3678999999998      3577899999976555556788999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          110 LDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       110 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |.+++...  ...+++..+..++.|++.||.|.
T Consensus       173 L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~L  203 (373)
T 2x4f_A          173 LFDRIIDE--SYNLTELDTILFMKQICEGIRHM  203 (373)
T ss_dssp             EHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99988642  33488999999999999999873

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.66  E-value=9.9e-16  Score=104.47  Aligned_cols=112  Identities=18%  Similarity=0.247  Sum_probs=94.0

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ...++|.+.+.||+|+||.|      ..+..+++|.+..........+..|+.++..+.|||++++++++...+..++++
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   95 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI   95 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred             CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence            35678999999999999988      347789999987655556788999999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++++|.+++...  ...+++..+..++.|++.||.|.
T Consensus        96 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~l  133 (302)
T 2j7t_A           96 EFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFL  133 (302)
T ss_dssp             ECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999988642  33488999999999999999863

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.66  E-value=4.1e-16  Score=108.26  Aligned_cols=117  Identities=23%  Similarity=0.305  Sum_probs=94.8

Q ss_pred             HHHHHccCcccceeecccCceeecC-----------CcEEEEEEeccC-CcccHHHHHHHHHHHhhC-CCCCeeeEeeEE
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRS-SSQGAQEINNEVVVVAKL-QHINLVRLLGFC   92 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~   92 (146)
                      +|....++|...+.||+|+||.|+.           +..+|+|.+... .......+.+|+.++..+ .||||+++++++
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  118 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC  118 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            4566778999999999999999832           336999998643 223356788999999999 899999999999


Q ss_pred             EcCCceeEEEEecCCCCHHHhhcCCCCC--------------------CCCChHHHHHHHHHHHHHHhhh
Q 048150           93 LEREEKILVYEYVPNKRLDNFLYEPEKQ--------------------GQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        93 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~--------------------~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ...+..+++|||+++|+|.+++......                    ..+++..+..++.|++.||.|.
T Consensus       119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  188 (344)
T 1rjb_A          119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL  188 (344)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHH
T ss_pred             eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999763221                    2378899999999999999874

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.66  E-value=5.6e-16  Score=106.95  Aligned_cols=109  Identities=17%  Similarity=0.252  Sum_probs=93.4

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      .++|...+.||+|+||.|      ..|..+|+|.+...   .......+..|..++..+.||||+++++.+...+.++++
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            367899999999999998      36789999998643   122456678899999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        85 ~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~L  122 (318)
T 1fot_A           85 MDYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYL  122 (318)
T ss_dssp             ECCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999964   33588999999999999999863

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.66  E-value=5.8e-16  Score=105.43  Aligned_cols=111  Identities=23%  Similarity=0.410  Sum_probs=93.7

Q ss_pred             HccCcccceeecccCceeec----------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--Cc
Q 048150           30 ATNKFSTDNKLGEGGFGVLP----------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER--EE   97 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~----------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~   97 (146)
                      ..++|++.+.||+|+||.|+          .+..+|+|.+..........+.+|+.++..++|+|++++++++...  ..
T Consensus         8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   87 (295)
T 3ugc_A            8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN   87 (295)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred             CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence            34678999999999999982          4668999999765555567889999999999999999999988643  55


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++|||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~l  130 (295)
T 3ugc_A           88 LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL  130 (295)
T ss_dssp             CEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999753  23488999999999999999873

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.66  E-value=5.8e-16  Score=109.40  Aligned_cols=109  Identities=17%  Similarity=0.208  Sum_probs=93.9

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      .++|.+.+.||+|+||.|      ..+..+|+|.+...   .......+.+|+.++..++||||+++++++...+.++++
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            467999999999999998      45678999998642   122356788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+.+|+|..++..   ...+++..+..++.|++.||.|.
T Consensus        94 ~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~L  131 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYL  131 (384)
T ss_dssp             ECCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999965   34589999999999999999873

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.66  E-value=1.5e-16  Score=113.31  Aligned_cols=113  Identities=16%  Similarity=0.121  Sum_probs=94.3

Q ss_pred             HHHHHccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLERE   96 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~   96 (146)
                      ++....++|...+.||+|+||.|      ..+..+|+|++...   .......+..|..++..++||||+++++++...+
T Consensus        63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~  142 (410)
T 3v8s_A           63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  142 (410)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence            34445678999999999999998      35778999998632   1122345778999999999999999999999999


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+++||||+++|+|.+++.+    ..+++..+..++.|++.||.|.
T Consensus       143 ~~~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~L  184 (410)
T 3v8s_A          143 YLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAI  184 (410)
T ss_dssp             EEEEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999864    2478899999999999999873

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.66  E-value=8.6e-16  Score=103.66  Aligned_cols=110  Identities=16%  Similarity=0.258  Sum_probs=95.2

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ..++|.+.+.||+|+||.|      ..+..+++|.+..........+.+|+.++..++|+|++++++++...+..++++|
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            3467899999999999998      3456789999876545567889999999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++++|.+.+..   ...+++..+..++.|++.||.|.
T Consensus        87 ~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~l  122 (277)
T 3f3z_A           87 LCTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYC  122 (277)
T ss_dssp             CCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999998864   23488999999999999999863

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.66  E-value=2.2e-15  Score=103.40  Aligned_cols=109  Identities=17%  Similarity=0.248  Sum_probs=92.9

Q ss_pred             ccCccc-ceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEE
Q 048150           31 TNKFST-DNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        31 ~~~~~~-~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .+.|.+ .+.||+|+||.|      ..+..+|+|.+..........+.+|+.++.++ .|+||+++++++...+..+++|
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   90 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF   90 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            356776 478999999998      35778999999765555577889999999885 7999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        91 e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~l  127 (316)
T 2ac3_A           91 EKMRGGSILSHIHK---RRHFNELEASVVVQDVASALDFL  127 (316)
T ss_dssp             ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999965   23588999999999999999873

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.66  E-value=9.4e-16  Score=111.66  Aligned_cols=112  Identities=21%  Similarity=0.279  Sum_probs=92.8

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccCCc-------------ccHHHHHHHHHHHhhCCCCCeeeE
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-------------QGAQEINNEVVVVAKLQHINLVRL   88 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~i~~l   88 (146)
                      ....++|...+.||+|+||.|      ..+..+|+|.+.....             .....+.+|+.++..++||||+++
T Consensus        32 ~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~  111 (504)
T 3q5i_A           32 GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL  111 (504)
T ss_dssp             SCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            445688999999999999998      3567899999864321             234678899999999999999999


Q ss_pred             eeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           89 LGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        89 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++.....+++||||+++|+|.+.+..   ...+++..+..++.|++.||.|.
T Consensus       112 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~l  162 (504)
T 3q5i_A          112 FDVFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYL  162 (504)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999998864   23489999999999999999873

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.66  E-value=6.3e-16  Score=107.93  Aligned_cols=112  Identities=14%  Similarity=0.189  Sum_probs=93.7

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC-----CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS-----SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      .+.|.+.+.||+|+||.|      ..+..+|+|.+...     .......+.+|+.++..++||||+++++++...+.++
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            356899999999999998      35788999998532     1123577899999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|||+++|+|.+.+... .....+++..+..++.|++.||.|.
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l  146 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC  146 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999998877542 2233578999999999999999873

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.66  E-value=2.6e-16  Score=113.30  Aligned_cols=116  Identities=22%  Similarity=0.278  Sum_probs=96.3

Q ss_pred             hhHHHHHccCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           24 FETIEDATNKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        24 ~~~~~~~~~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      ...|....++|.+.+.||+|+||.|+     .+..+|+|.+.... .....+.+|+.++..++||||+++++++.. +..
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~  253 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  253 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cce
Confidence            45566777889999999999999993     34579999986533 346789999999999999999999998865 778


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|||+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus       254 ~iv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~L  296 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYV  296 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEehhhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999642 223478899999999999999873

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.65  E-value=1.9e-15  Score=102.65  Aligned_cols=110  Identities=21%  Similarity=0.207  Sum_probs=91.5

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      ++.....||+|+||.|      ..+..+++|.+..........+..|+.++..++|+|++++++++...+..++++||++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            3455568999999998      3567899999876555556788999999999999999999999999999999999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|.+++........+++..+..++.|++.||.|.
T Consensus       103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~l  138 (295)
T 2clq_A          103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL  138 (295)
T ss_dssp             EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHH
Confidence            999999997644444567888999999999999863

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.65  E-value=4.1e-16  Score=105.74  Aligned_cols=116  Identities=22%  Similarity=0.323  Sum_probs=98.4

Q ss_pred             hHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      ++|....++|...+.||+|+||.|      ..+..+++|.+... ......+.+|+.++..++|+|++++++++...+..
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   84 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF   84 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence            455567788999999999999998      33678999998643 23467788999999999999999999999988999


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++++|.+++... ....+++..+..++.|++.||.|.
T Consensus        85 ~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~l  127 (288)
T 3kfa_A           85 YIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYL  127 (288)
T ss_dssp             EEEEECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHH
Confidence            9999999999999999752 334588999999999999999863

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.65  E-value=8e-16  Score=107.59  Aligned_cols=111  Identities=18%  Similarity=0.164  Sum_probs=92.6

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCce
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEK   98 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~   98 (146)
                      ...++|.+.+.||+|+||.|      ..+..+|+|.+...   .......+..|..++..+ .||+|+++++++...+.+
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~   99 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL   99 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence            34578999999999999998      35778999998643   222356678899999887 799999999999999999


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus       100 ~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~L  140 (353)
T 3txo_A          100 FFVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFL  140 (353)
T ss_dssp             EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999864   23589999999999999999873

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.65  E-value=2.8e-16  Score=108.64  Aligned_cols=128  Identities=23%  Similarity=0.338  Sum_probs=100.8

Q ss_pred             ccccccccChh-HHHHHccCcccceeecccCceeecC------C-----cEEEEEEeccCC-cccHHHHHHHHHHHhhC-
Q 048150           15 TTLESLQFDFE-TIEDATNKFSTDNKLGEGGFGVLPN------E-----HEIAVKRLSRSS-SQGAQEINNEVVVVAKL-   80 (146)
Q Consensus        15 ~~~~~~~~~~~-~~~~~~~~~~~~~~lg~g~fg~v~~------~-----~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l-   80 (146)
                      ...++..++.. .+....++|...+.||+|+||.|+.      +     ..+++|.+.... ......+.+|+.++..+ 
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~  107 (333)
T 2i1m_A           28 TFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG  107 (333)
T ss_dssp             CSCCTTSSCCCGGGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             cccCCccccccccccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhc
Confidence            33344444433 5666778999999999999999832      1     369999986543 23356788999999999 


Q ss_pred             CCCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCC-----------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE-----------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        81 ~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .||||+++++++...+..+++|||+++|+|.+++....           ....+++..+..++.|++.||.|.
T Consensus       108 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l  180 (333)
T 2i1m_A          108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL  180 (333)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999986421           133478899999999999999874

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.65  E-value=5.4e-16  Score=108.89  Aligned_cols=113  Identities=22%  Similarity=0.368  Sum_probs=93.5

Q ss_pred             HccCcccceeecccCceeecC-----------CcEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           30 ATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      ..++|.+.+.||+|+||.|+.           +..+|+|.+... .......+.+|+.++..++|+||+++++++.....
T Consensus        69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  148 (367)
T 3l9p_A           69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  148 (367)
T ss_dssp             CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence            346789999999999999832           337999998643 22335568899999999999999999999998889


Q ss_pred             eeEEEEecCCCCHHHhhcCCC----CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPE----KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .++||||+++|+|.+++....    ....+++..+..++.|++.||.|.
T Consensus       149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  197 (367)
T 3l9p_A          149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL  197 (367)
T ss_dssp             CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997532    223588999999999999999873

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.65  E-value=2.3e-15  Score=102.38  Aligned_cols=108  Identities=10%  Similarity=0.077  Sum_probs=90.6

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcc---cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ---GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ...+|.+.+.||+|+||.|      ..+..+|+|.+......   ....+..|+..+..+.|+||+++++++...+..++
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  108 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV  108 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence            4467999999999999998      34778999999754322   24678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|||+++++|.+++..   .  .....+..++.|++.||.|.
T Consensus       109 v~e~~~g~~L~~~l~~---~--~~~~~~~~i~~ql~~aL~~l  145 (286)
T 3uqc_A          109 VAEWIRGGSLQEVADT---S--PSPVGAIRAMQSLAAAADAA  145 (286)
T ss_dssp             EEECCCEEEHHHHHTT---C--CCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCHHHHHhc---C--CChHHHHHHHHHHHHHHHHH
Confidence            9999999999999953   1  24456888999999999873

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.65  E-value=3e-16  Score=115.07  Aligned_cols=116  Identities=22%  Similarity=0.278  Sum_probs=96.3

Q ss_pred             hhHHHHHccCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           24 FETIEDATNKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        24 ~~~~~~~~~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      ...|....++|.+.+.||+|+||.|+     .+..+|+|.+.... .....+.+|+.+|..++|+||+++++++.. +.+
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~  336 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  336 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             ccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence            45566777889999999999999993     34579999986543 346789999999999999999999998865 778


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||||+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus       337 ~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~L  379 (535)
T 2h8h_A          337 YIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYV  379 (535)
T ss_dssp             EEEECCCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             eEeeehhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999642 223478899999999999999873

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.65  E-value=9.7e-16  Score=106.22  Aligned_cols=117  Identities=24%  Similarity=0.388  Sum_probs=96.5

Q ss_pred             HHHHHccCcccceeecccCceeecC-----------CcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEE
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCL   93 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~   93 (146)
                      .+....++|...+.||+|+||.|+.           +..+|+|.+..... .....+.+|+.++..++|+||+++++++.
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  120 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA  120 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            3345568899999999999999832           25799999875432 23567889999999999999999999999


Q ss_pred             cCCceeEEEEecCCCCHHHhhcCCCC---------------------CCCCChHHHHHHHHHHHHHHhhh
Q 048150           94 EREEKILVYEYVPNKRLDNFLYEPEK---------------------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        94 ~~~~~~lv~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..+..+++|||+++|+|.+++.....                     ...+++..+..++.|++.||.|.
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~L  190 (343)
T 1luf_A          121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL  190 (343)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999975321                     14689999999999999999873

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.65  E-value=9.5e-16  Score=107.10  Aligned_cols=108  Identities=19%  Similarity=0.197  Sum_probs=93.1

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|...+.||+|+||.|      ..|..+|+|.+....   ......+.+|+.++..+.||+|+++++++...+.++++|
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            57999999999999998      357889999986431   224567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++...   ..+++..+..++.|++.||.|.
T Consensus       121 e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~L  157 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYL  157 (350)
T ss_dssp             ECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999652   3488999999999999999874

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.65  E-value=1e-15  Score=109.98  Aligned_cols=110  Identities=19%  Similarity=0.234  Sum_probs=92.6

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ..++|...+.||+|+||.|      ..|..+|+|.+.....  .....+.+|+.++..++||||+++++++...+..+++
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            4567999999999999998      3577899999875432  2345688999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+++|+|.+.+..   ...+++..+..++.|++.||.|.
T Consensus        89 ~E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~l  126 (444)
T 3soa_A           89 FDLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHC  126 (444)
T ss_dssp             ECCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999998865   23589999999999999999873

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.65  E-value=1.8e-15  Score=101.58  Aligned_cols=110  Identities=25%  Similarity=0.340  Sum_probs=94.0

Q ss_pred             HccCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           30 ATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ..++|...+.||+|+||.|     ..+..+|+|.+.... .....+.+|+.++..++|||++++++++...+..+++|||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY   84 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence            4577899999999999998     344579999986543 2456788999999999999999999999988899999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++|.+++...  ...+++..+..++.|++.||.|.
T Consensus        85 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~l  120 (268)
T 3sxs_A           85 ISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFL  120 (268)
T ss_dssp             CTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999653  33488999999999999999864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.65  E-value=1.2e-15  Score=106.34  Aligned_cols=108  Identities=16%  Similarity=0.135  Sum_probs=92.0

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      .+|...+.||+|+||.|      ..+..+|+|.+....   ......+..|..++..+ +||||+++++++...+.++++
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            57899999999999998      357789999997542   22345678899999887 899999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        89 ~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~L  126 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYL  126 (345)
T ss_dssp             ECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999864   23588999999999999999863

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.64  E-value=1.4e-15  Score=110.18  Aligned_cols=109  Identities=20%  Similarity=0.341  Sum_probs=94.1

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ..+|.+.+.||+|+||.|      ..|..+|+|.+....   ......+.+|+.++..++||||+++++++...+.++++
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            467999999999999998      367899999986431   12356788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        95 ~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~L  132 (476)
T 2y94_A           95 MEYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYC  132 (476)
T ss_dssp             EECCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999964   34589999999999999999863

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.64  E-value=5.7e-16  Score=106.14  Aligned_cols=117  Identities=21%  Similarity=0.319  Sum_probs=96.0

Q ss_pred             HHHHHccCcccceeecccCceeecC-----------CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEE
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCL   93 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~   93 (146)
                      ++....++|...+.||+|+||.|+.           +..+|+|.+.... ......+.+|+.++..++||||+++++++.
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   96 (314)
T 2ivs_A           17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS   96 (314)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             ccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEe
Confidence            4444567899999999999999832           2579999986432 233567889999999999999999999999


Q ss_pred             cCCceeEEEEecCCCCHHHhhcCCCC---------------------CCCCChHHHHHHHHHHHHHHhhh
Q 048150           94 EREEKILVYEYVPNKRLDNFLYEPEK---------------------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        94 ~~~~~~lv~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..+..++++||+++|+|.+++.....                     ...+++..+..++.|++.||.|.
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l  166 (314)
T 2ivs_A           97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL  166 (314)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHH
T ss_pred             cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999975322                     12378899999999999999874

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.64  E-value=1.5e-15  Score=103.77  Aligned_cols=110  Identities=21%  Similarity=0.248  Sum_probs=91.7

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ..++|...+.||+|+||.|      ..|..+++|.+..........+.+|+.++..++|||++++++++...+..++++|
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ   86 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence            3467899999999999998      3578899999975544445668899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++++|.+++..   ...+++..+..++.|++.||.|.
T Consensus        87 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~l  122 (304)
T 2jam_A           87 LVSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYL  122 (304)
T ss_dssp             CCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999998864   23478999999999999999863

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.64  E-value=1.1e-15  Score=105.67  Aligned_cols=110  Identities=17%  Similarity=0.200  Sum_probs=88.2

Q ss_pred             HccCcccceeecccCceeec---------CCcEEEEEEeccCC----cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC
Q 048150           30 ATNKFSTDNKLGEGGFGVLP---------NEHEIAVKRLSRSS----SQGAQEINNEVVVVAKLQHINLVRLLGFCLERE   96 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~---------~~~~~a~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~   96 (146)
                      ..++|.+.+.||+|+||.|+         .+..+|+|.+....    ......+..|+.++..++|+||+++++++...+
T Consensus        15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   94 (327)
T 3a62_A           15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG   94 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence            34679999999999999983         56789999986542    123455778999999999999999999999999


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .++++|||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~l  137 (327)
T 3a62_A           95 KLYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHL  137 (327)
T ss_dssp             CEEEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999864   23478889999999999999873

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.64  E-value=1e-15  Score=106.74  Aligned_cols=112  Identities=19%  Similarity=0.183  Sum_probs=92.6

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCc
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREE   97 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~   97 (146)
                      ....++|.+.+.||+|+||.|      ..+..+|+|.+....   ......+..|..++..+ .||+|+++++++...+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            445688999999999999998      357789999986431   22456677888888876 99999999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        93 ~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~L  134 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFL  134 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999964   23488999999999999999874

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.64  E-value=9.2e-16  Score=108.78  Aligned_cols=110  Identities=15%  Similarity=0.128  Sum_probs=91.3

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCcee
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~   99 (146)
                      ..++|.+.+.||+|+||.|      ..+..+|+|++....   ......+..|..++..+ +||||+++++++...+.++
T Consensus        50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  129 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF  129 (396)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence            3467999999999999998      356789999986432   22244577888888776 8999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||||+++|+|..++..   ...+++..+..++.|++.||.|.
T Consensus       130 lV~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~L  169 (396)
T 4dc2_A          130 FVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYL  169 (396)
T ss_dssp             EEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999864   23589999999999999999873

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.64  E-value=2.6e-15  Score=103.42  Aligned_cols=109  Identities=21%  Similarity=0.323  Sum_probs=93.9

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcc------cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ------GAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      .++|.+.+.||+|+||.|      ..|..+|+|.+......      ....+.+|+.++..+.|||++++++++...+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            456889999999999998      35778999998654221      356789999999999999999999999999999


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++++|.+++..   ...+++..+..++.|++.||.|.
T Consensus        91 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~l  131 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYL  131 (321)
T ss_dssp             EEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999965   33588999999999999999873

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.64  E-value=1.8e-15  Score=111.48  Aligned_cols=112  Identities=21%  Similarity=0.228  Sum_probs=94.8

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ..++|...+.||+|+||.|      ..|..+|+|.+...   .......+..|+.++..++|+||+++++++...+.+++
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            3466999999999999998      35789999998642   12235567899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||||+++|+|.+++... ....+++..+..++.||+.||.|.
T Consensus       262 VmEy~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yL  302 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDL  302 (576)
T ss_dssp             EECCCCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999998763 233489999999999999999873

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.64  E-value=2.5e-15  Score=104.86  Aligned_cols=108  Identities=19%  Similarity=0.271  Sum_probs=87.0

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ..++|...+.||+|+||.|      ..+..+|+|.+...  .....+.+|+.++..+.|+||+++++++...+..++++|
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc--hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            4467999999999999998      34678999998643  234567789999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus       129 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~L  164 (349)
T 2w4o_A          129 LVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYL  164 (349)
T ss_dssp             CCCSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999865   33488999999999999999874

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.64  E-value=8e-16  Score=108.48  Aligned_cols=116  Identities=21%  Similarity=0.331  Sum_probs=95.7

Q ss_pred             HHHHccCcccceeecccCceeecCC-------------cEEEEEEeccCC-cccHHHHHHHHHHHhhC-CCCCeeeEeeE
Q 048150           27 IEDATNKFSTDNKLGEGGFGVLPNE-------------HEIAVKRLSRSS-SQGAQEINNEVVVVAKL-QHINLVRLLGF   91 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v~~~-------------~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~l~~~   91 (146)
                      |....++|.+.+.||+|+||.|+..             ..+|+|.+.... ......+.+|+.++..+ +|+||++++++
T Consensus        64 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~  143 (382)
T 3tt0_A           64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA  143 (382)
T ss_dssp             TBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheee
Confidence            4455678999999999999999422             369999986542 22356788999999999 99999999999


Q ss_pred             EEcCCceeEEEEecCCCCHHHhhcCCCC-------------CCCCChHHHHHHHHHHHHHHhhh
Q 048150           92 CLEREEKILVYEYVPNKRLDNFLYEPEK-------------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        92 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +...+..+++|||+++|+|.+++.....             ...+++..+..++.|++.||.|.
T Consensus       144 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  207 (382)
T 3tt0_A          144 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL  207 (382)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999975321             23589999999999999999863

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.63  E-value=6.1e-16  Score=107.37  Aligned_cols=117  Identities=19%  Similarity=0.196  Sum_probs=94.2

Q ss_pred             HHHHHccCcccceeecccCceee------cCCcEEEEEEeccC-----CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS-----SSQGAQEINNEVVVVAKLQHINLVRLLGFCLE   94 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~   94 (146)
                      ++....++|.+.+.||+|+||.|      ..+..+|+|.+...     .......+..|+.++..++||||+++++++..
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   99 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED   99 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence            44566788999999999999998      35668999998533     22345778999999999999999999999999


Q ss_pred             CCceeEEEEecCCCCHHHhhcCCC-------------------------------------CCCCCChHHHHHHHHHHHH
Q 048150           95 REEKILVYEYVPNKRLDNFLYEPE-------------------------------------KQGQWDCSRRYKIIGGRGR  137 (146)
Q Consensus        95 ~~~~~lv~e~~~~g~L~~~l~~~~-------------------------------------~~~~~~~~~~~~i~~~i~~  137 (146)
                      .+..+++|||+++|+|.+++....                                     ....+++..+..++.|++.
T Consensus       100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  179 (345)
T 3hko_A          100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS  179 (345)
T ss_dssp             SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence            999999999999999999985210                                     0112356778889999999


Q ss_pred             HHhhh
Q 048150          138 DCSRN  142 (146)
Q Consensus       138 ~l~~~  142 (146)
                      ||.|.
T Consensus       180 ~l~~L  184 (345)
T 3hko_A          180 ALHYL  184 (345)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99873

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.63  E-value=1.6e-15  Score=101.66  Aligned_cols=110  Identities=23%  Similarity=0.410  Sum_probs=94.2

Q ss_pred             HccCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           30 ATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ..++|...+.||+|+||.|     ..+..+++|.+.... .....+.+|+.++..++|||++++++++...+..++++||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (267)
T 3t9t_A            6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF   84 (267)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred             chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence            4567899999999999998     356689999986543 2456788999999999999999999999988999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++|.+++...  ...+++..+..++.|++.||.|.
T Consensus        85 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~l  120 (267)
T 3t9t_A           85 MEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYL  120 (267)
T ss_dssp             CTTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999653  33578999999999999999874

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.63  E-value=1.8e-15  Score=102.27  Aligned_cols=112  Identities=24%  Similarity=0.291  Sum_probs=94.1

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      .++|...+.||+|+||.|      ..+..+++|.+....  ......+.+|+..+..+ .||||+++++++...+..+++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            467899999999999998      357899999987542  22356678899988888 999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCC-CCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEK-QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+++|+|.+++..... ...+++..+..++.|++.||.|.
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l  131 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI  131 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999965311 24588999999999999999874

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.63  E-value=9.7e-16  Score=105.72  Aligned_cols=109  Identities=16%  Similarity=0.159  Sum_probs=89.6

Q ss_pred             HHccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc----eeE
Q 048150           29 DATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE----KIL  100 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~----~~l  100 (146)
                      ....+|.+.+.||+|+||.|    ..+..+|+|.+.... ........|+.++..++||||+++++++.....    +++
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l   99 (322)
T 3soc_A           21 FQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL   99 (322)
T ss_dssp             ETTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cchhhchhhheecccCceEEEEEEECCCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence            34577999999999999999    457789999985432 223445568888999999999999999987543    699


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|||+++|+|.+++..    ..+++..+..++.|++.||.|.
T Consensus       100 v~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~L  137 (322)
T 3soc_A          100 ITAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYL  137 (322)
T ss_dssp             EEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999964    2388999999999999999764

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.63  E-value=1.6e-15  Score=104.13  Aligned_cols=113  Identities=24%  Similarity=0.330  Sum_probs=93.1

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc----CCcee
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLE----REEKI   99 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~----~~~~~   99 (146)
                      ..++|...+.||+|+||.|      ..+..+|+|.+..........+.+|+.++..++|+|++++++++..    .+..+
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence            4578999999999999988      4678899999876555556778999999999999999999998872    34689


Q ss_pred             EEEEecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++|+|.+++... .....+++..+..++.|++.||.|.
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L  150 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI  150 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999988642 1244589999999999999999864

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.63  E-value=3.1e-15  Score=108.39  Aligned_cols=110  Identities=21%  Similarity=0.285  Sum_probs=95.3

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ..++|...+.||+|+||.|      ..+..+|+|.+....   ......+.+|+.++..++||||+++++++...+..++
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            4467999999999999998      367899999986442   2346788999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||+.+|+|.+.+..   ...+++..+..++.|++.||.|.
T Consensus       104 v~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~l  142 (484)
T 3nyv_A          104 VGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYM  142 (484)
T ss_dssp             EECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999998865   23588999999999999999873

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.63  E-value=3.3e-15  Score=100.45  Aligned_cols=108  Identities=23%  Similarity=0.309  Sum_probs=88.9

Q ss_pred             ccCcccceeecccCceee----cCCcEEEEEEeccCCc----ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSS----QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ..+|...+.||+|+||.|    ..+..+|+|.+.....    .....+.+|+.++..++|+|++++++++...+..++++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            467899999999999998    4577899999864322    23567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++++|.+++..    ..+++..+..++.|++.||.|.
T Consensus        86 e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~l  121 (271)
T 3dtc_A           86 EFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYL  121 (271)
T ss_dssp             ECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999853    3588999999999999999874

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.63  E-value=1.8e-15  Score=109.89  Aligned_cols=110  Identities=21%  Similarity=0.288  Sum_probs=90.2

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ..+.|...+.||+|+||.|      ..+..+|+|.+....  ......+.+|+.++..++||||+++++++...+..++|
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  114 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV  114 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            3456999999999999999      357789999987542  23356788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+++|+|.+.+..   ...+++..+..++.|++.||.|.
T Consensus       115 ~e~~~~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~l  152 (494)
T 3lij_A          115 MECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYL  152 (494)
T ss_dssp             EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999998864   23488999999999999999873

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.63  E-value=1.8e-15  Score=102.63  Aligned_cols=111  Identities=16%  Similarity=0.245  Sum_probs=94.5

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      .++|...+.||+|+||.|      ..+..+++|.+.... ......+.+|+.++..++||||+++++++...+..++++|
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            356899999999999998      357789999986543 2346788999999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+++|+|.+.+... .....+++..+..++.|++.||.|
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~  139 (285)
T 3is5_A          101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY  139 (285)
T ss_dssp             CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHH
Confidence            99999999988542 123458899999999999999987

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.63  E-value=1.7e-15  Score=109.89  Aligned_cols=110  Identities=20%  Similarity=0.277  Sum_probs=94.6

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ..++|.+.+.||+|+||.|      ..+..+|+|.+...  .......+.+|+.++..++||||+++++++...+.++++
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   99 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence            4467999999999999998      35778999998532  223467789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+++|+|.+.+..   ...+++..+..++.|++.||.|.
T Consensus       100 ~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~l  137 (486)
T 3mwu_A          100 GELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYM  137 (486)
T ss_dssp             ECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999998864   23588999999999999999873

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.63  E-value=4.7e-16  Score=106.99  Aligned_cols=122  Identities=21%  Similarity=0.332  Sum_probs=99.6

Q ss_pred             ccChhHHHHHccCcccceeecccCceeecC-----------CcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeE
Q 048150           21 QFDFETIEDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRL   88 (146)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l   88 (146)
                      .+..++|....++|...+.||+|+||.|+.           +..+++|.+..... .....+.+|+.++..+.|+|++++
T Consensus        14 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   93 (322)
T 1p4o_A           14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL   93 (322)
T ss_dssp             CCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred             ccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeee
Confidence            445567777788999999999999999843           45689999864322 234568899999999999999999


Q ss_pred             eeEEEcCCceeEEEEecCCCCHHHhhcCCC-------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           89 LGFCLEREEKILVYEYVPNKRLDNFLYEPE-------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        89 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++...+..+++|||+++|+|.+++....       ....+++..+..++.|++.||.|.
T Consensus        94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l  154 (322)
T 1p4o_A           94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL  154 (322)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence            999998889999999999999999986421       123468899999999999999874

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.63  E-value=1.9e-15  Score=103.59  Aligned_cols=108  Identities=21%  Similarity=0.346  Sum_probs=90.7

Q ss_pred             ccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           31 TNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      .++|...+.||+|+||.|    ..+..+++|.+...  .....+..|+.++..++||||+++++++.  +..+++|||++
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~   82 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE   82 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred             HhHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence            357888999999999998    45778999998532  34677899999999999999999999875  45899999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|+|.+++........+++..+..++.|+++||.|.
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~L  118 (307)
T 2eva_A           83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL  118 (307)
T ss_dssp             TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHH
Confidence            999999997644444578889999999999999764

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.63  E-value=1e-15  Score=104.84  Aligned_cols=117  Identities=26%  Similarity=0.327  Sum_probs=96.8

Q ss_pred             HHHHHccCcccceeecccCceeec-----------CCcEEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCCeeeEeeEE
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVLP-----------NEHEIAVKRLSRSSS-QGAQEINNEVVVVAKL-QHINLVRLLGFC   92 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v~-----------~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~l~~~~   92 (146)
                      .+....++|...+.||+|+||.|+           .+..+++|.+..... .....+.+|+.++..+ +|||++++++++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~   96 (313)
T 1t46_A           17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC   96 (313)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEE
Confidence            455667889999999999999983           235799999875432 2356788999999999 999999999999


Q ss_pred             EcCCceeEEEEecCCCCHHHhhcCCCC---------------CCCCChHHHHHHHHHHHHHHhhh
Q 048150           93 LEREEKILVYEYVPNKRLDNFLYEPEK---------------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        93 ~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ...+..++++||+++|+|.+++.....               ...+++..+..++.|++.||.|.
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l  161 (313)
T 1t46_A           97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL  161 (313)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999975321               12488999999999999999864

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.63  E-value=4.6e-15  Score=100.32  Aligned_cols=108  Identities=19%  Similarity=0.323  Sum_probs=93.1

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc------ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS------QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ++|...+.||+|+||.|      ..+..+++|.+.....      .....+.+|+.++..++|||++++++++...+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            56889999999999998      3578899999864321      13677899999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++++|.+++..   ...+++..+..++.|++.||.|.
T Consensus        85 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~l  124 (283)
T 3bhy_A           85 LILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYL  124 (283)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999964   23588999999999999999874

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.62  E-value=3.5e-15  Score=100.69  Aligned_cols=110  Identities=19%  Similarity=0.293  Sum_probs=93.9

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      .++|.+.+.||+|+||.|      ..+..+++|.+....   ......+.+|+.++..++|||++++++++...+..+++
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            467999999999999998      367789999986331   12346788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+++++|.+++...  ...+++..+..++.|++.||.|.
T Consensus        90 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~l  128 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYL  128 (278)
T ss_dssp             EECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999753  34588999999999999999874

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.62  E-value=2.2e-15  Score=105.26  Aligned_cols=122  Identities=18%  Similarity=0.195  Sum_probs=101.2

Q ss_pred             cccccChhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC-----CCCee
Q 048150           18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ-----HINLV   86 (146)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~-----h~~i~   86 (146)
                      +...+++........+|.+.+.||+|+||.|      ..+..+|+|.+... ......+..|+.++..+.     |+||+
T Consensus        21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv   99 (360)
T 3llt_A           21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIV   99 (360)
T ss_dssp             GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred             cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence            4556677777778899999999999999998      36778999998632 233556778889998886     99999


Q ss_pred             eEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           87 RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        87 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++++...+..+++|||+ +++|.+++... ....+++..+..++.|++.||.|.
T Consensus       100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~L  153 (360)
T 3llt_A          100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYL  153 (360)
T ss_dssp             CEEEEEEETTEEEEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cccceeeECCeeEEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999 88999999753 233488999999999999999874

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.62  E-value=2e-15  Score=104.58  Aligned_cols=116  Identities=22%  Similarity=0.337  Sum_probs=94.5

Q ss_pred             HHHHccCcccceeecccCceeec-------------CCcEEEEEEeccCC-cccHHHHHHHHHHHhhC-CCCCeeeEeeE
Q 048150           27 IEDATNKFSTDNKLGEGGFGVLP-------------NEHEIAVKRLSRSS-SQGAQEINNEVVVVAKL-QHINLVRLLGF   91 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v~-------------~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~l~~~   91 (146)
                      |....++|.+.+.||+|+||.|+             .+..+|+|.+.... ......+..|+.++..+ +||||++++++
T Consensus        30 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  109 (334)
T 2pvf_A           30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA  109 (334)
T ss_dssp             TBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEE
Confidence            34456889999999999999983             23469999986542 22356788999999999 89999999999


Q ss_pred             EEcCCceeEEEEecCCCCHHHhhcCCCC-------------CCCCChHHHHHHHHHHHHHHhhh
Q 048150           92 CLEREEKILVYEYVPNKRLDNFLYEPEK-------------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        92 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +...+..++++||+++|+|.+++.....             ...+++..+..++.|++.||.|.
T Consensus       110 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  173 (334)
T 2pvf_A          110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL  173 (334)
T ss_dssp             ECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHH
T ss_pred             EccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999975321             12478899999999999999863

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.62  E-value=2e-15  Score=103.46  Aligned_cols=128  Identities=19%  Similarity=0.301  Sum_probs=100.9

Q ss_pred             ccccccccChhHHHHHccCcccceeecccCceeecC-----------CcEEEEEEeccCCc-ccHHHHHHHHHHHhhC-C
Q 048150           15 TTLESLQFDFETIEDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSSS-QGAQEINNEVVVVAKL-Q   81 (146)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l-~   81 (146)
                      .......+...++....++|.+.+.||+|+||.|+.           +..+|+|.+..... .....+.+|+.++..+ +
T Consensus        10 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~   89 (316)
T 2xir_A           10 EHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH   89 (316)
T ss_dssp             -CGGGSCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred             hhhhhccccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhccc
Confidence            334445566677778889999999999999999832           35799999865432 2345688999999999 7


Q ss_pred             CCCeeeEeeEEEcCC-ceeEEEEecCCCCHHHhhcCCCC-------------CCCCChHHHHHHHHHHHHHHhhh
Q 048150           82 HINLVRLLGFCLERE-EKILVYEYVPNKRLDNFLYEPEK-------------QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        82 h~~i~~l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||++++++++...+ ..++++||+++|+|.+++.....             ...+++..+..++.|++.||.|.
T Consensus        90 hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l  164 (316)
T 2xir_A           90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL  164 (316)
T ss_dssp             CTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHH
T ss_pred             CCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHH
Confidence            899999999987654 48999999999999999976322             12278899999999999999863

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.62  E-value=5.2e-15  Score=110.12  Aligned_cols=108  Identities=22%  Similarity=0.382  Sum_probs=88.6

Q ss_pred             cCcccce-eecccCceeec--------CCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           32 NKFSTDN-KLGEGGFGVLP--------NEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        32 ~~~~~~~-~lg~g~fg~v~--------~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      .++.+.+ .||+|+||.|+        .+..+|+|.+.... ......+.+|+.++..++|+||+++++++.. +.+++|
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv  413 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV  413 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence            3444444 79999999994        23469999997542 2346789999999999999999999999865 668999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus       414 ~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~L  452 (613)
T 2ozo_A          414 MEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYL  452 (613)
T ss_dssp             EECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999653  34589999999999999999873

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.62  E-value=7.5e-15  Score=100.53  Aligned_cols=108  Identities=23%  Similarity=0.268  Sum_probs=91.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ--GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ++|...+.||+|+||.|      ..+..+|+|.+......  ....+.+|+.++..++|+|++++++++...+..++++|
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            57899999999999998      34778999998644322  24567899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++++|.+++..   ...+++..+..++.|++.||.|.
T Consensus        83 ~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~l  118 (311)
T 4agu_A           83 YCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFC  118 (311)
T ss_dssp             CCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999988754   34488999999999999999873

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.62  E-value=4.2e-15  Score=109.06  Aligned_cols=111  Identities=19%  Similarity=0.207  Sum_probs=94.5

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|...+.||+|+||.|      ..|..+|+|.+....   ......+..|+.++..++||+|+++++++.....++++|
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            67889999999999998      357899999986431   223567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCC-CCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPE-KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++.... ....+++..+..++.||+.||.|.
T Consensus       265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~L  305 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL  305 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHH
Confidence            9999999999987532 244689999999999999999863

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.62  E-value=4.4e-15  Score=102.52  Aligned_cols=110  Identities=24%  Similarity=0.360  Sum_probs=93.1

Q ss_pred             ccCcccceeecccCceeec----------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc--CCce
Q 048150           31 TNKFSTDNKLGEGGFGVLP----------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLE--REEK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~----------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~--~~~~   98 (146)
                      .++|+..+.||+|+||.|+          .+..+++|.+..........+.+|+.++..++|+|++++++++..  .+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            3678999999999999982          456799999976655556778999999999999999999998874  4568


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++++|.+++...  ...+++..+..++.|++.||.|.
T Consensus       102 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~l  143 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYL  143 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999652  23488999999999999999863

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.62  E-value=4.2e-15  Score=101.37  Aligned_cols=109  Identities=17%  Similarity=0.273  Sum_probs=86.9

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcc--------------------------cHHHHHHHHHHH
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ--------------------------GAQEINNEVVVV   77 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~--------------------------~~~~~~~e~~~l   77 (146)
                      ...+|.+.+.||+|+||.|      ..+..+|+|.+......                          ....+.+|+.++
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            3478999999999999998      35678999998643211                          124578999999


Q ss_pred             hhCCCCCeeeEeeEEEc--CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           78 AKLQHINLVRLLGFCLE--REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        78 ~~l~h~~i~~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..++||||+++++++..  .+.++++|||+++++|.+++.    ...+++..+..++.|++.||.|.
T Consensus        91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~l  153 (298)
T 2zv2_A           91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYL  153 (298)
T ss_dssp             HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999986  457899999999999987653    23589999999999999999874

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.61  E-value=3.5e-15  Score=104.28  Aligned_cols=108  Identities=19%  Similarity=0.180  Sum_probs=93.4

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ..+|...+.||+|+||.|      ..+..+|+|.+.... ......+.+|+.++..++|+||+++++++...+..+++||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            467999999999999998      357789999987542 2335678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+++++|.+++..   ...+++..+..++.+++.||.|
T Consensus       112 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~  146 (360)
T 3eqc_A          112 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTY  146 (360)
T ss_dssp             CCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999964   2347889999999999999976

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.61  E-value=6.2e-15  Score=101.76  Aligned_cols=110  Identities=23%  Similarity=0.410  Sum_probs=92.3

Q ss_pred             ccCcccceeecccCceeec----------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC--ce
Q 048150           31 TNKFSTDNKLGEGGFGVLP----------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLERE--EK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~----------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~--~~   98 (146)
                      .++|.+.+.||+|+||.|+          .+..+|+|.+..........+.+|+.++..++|+|++++++++...+  .+
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            3568999999999999982          46689999997655555678899999999999999999999886543  68


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++++|.+++...  ...+++..+..++.|++.||.|.
T Consensus       120 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~L  161 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL  161 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999753  23488999999999999999863

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.61  E-value=2.2e-15  Score=105.36  Aligned_cols=111  Identities=19%  Similarity=0.132  Sum_probs=92.3

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCce
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEK   98 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~   98 (146)
                      ...++|...+.||+|+||.|      ..+..+|+|.+...   .......+..|..++..+ .||+++++++++...+.+
T Consensus        17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   96 (353)
T 2i0e_A           17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL   96 (353)
T ss_dssp             --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred             CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence            34578999999999999998      24567999998643   122456678899999887 899999999999999999


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        97 ~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~L  137 (353)
T 2i0e_A           97 YFVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFL  137 (353)
T ss_dssp             EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999964   23488999999999999999873

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.61  E-value=1.3e-14  Score=99.01  Aligned_cols=109  Identities=17%  Similarity=0.295  Sum_probs=94.2

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ..+.|...+.||+|+||.|      ..+..+++|.+.... ......+.+|+.++..+.|++++++++.+...+..++++
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   99 (303)
T 3a7i_A           20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM   99 (303)
T ss_dssp             GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence            4467999999999999998      346789999987543 334678899999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++++|.+++..    ..+++..+..++.|++.||.|.
T Consensus       100 e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~l  135 (303)
T 3a7i_A          100 EYLGGGSALDLLEP----GPLDETQIATILREILKGLDYL  135 (303)
T ss_dssp             ECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999853    3488999999999999999863

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.61  E-value=6.9e-15  Score=101.05  Aligned_cols=110  Identities=22%  Similarity=0.298  Sum_probs=91.1

Q ss_pred             HccCcccceeecccCceee-----cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ..++|...+.||+|+||.|     ..+..+|+|.+.....  .....+.+|+.++..++||||+++++++...+.++++|
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            4577999999999999998     3577899999864422  22467889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++ +|.+.+...  ...+++..+..++.|++.||.|.
T Consensus        99 e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~L  135 (311)
T 3niz_A           99 EFMEK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHC  135 (311)
T ss_dssp             ECCSE-EHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCC-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99985 788887652  34488999999999999999873

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.61  E-value=8.2e-15  Score=99.90  Aligned_cols=110  Identities=23%  Similarity=0.392  Sum_probs=90.2

Q ss_pred             ccCcccceeecccCceeec----------CCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--Cc
Q 048150           31 TNKFSTDNKLGEGGFGVLP----------NEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLER--EE   97 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~----------~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~   97 (146)
                      .+.|+..+.||+|+||.|+          .+..+|+|.+.... ......+.+|+.++..++|+|++++++++...  +.
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   99 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   99 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence            3558889999999999982          56689999987442 23457789999999999999999999999876  66


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus       100 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~l  142 (302)
T 4e5w_A          100 IKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYL  142 (302)
T ss_dssp             EEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHh
Confidence            89999999999999999542  33488999999999999999863

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.61  E-value=6.4e-15  Score=99.64  Aligned_cols=110  Identities=22%  Similarity=0.289  Sum_probs=93.6

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ..++|...+.||+|+||.|      ..+..+++|.+....  ......+.+|+.++..++|+|++++++++...+..+++
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   83 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   83 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence            3578999999999999998      347789999986432  22346688999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+++++|.+.+..   ...+++..+..++.|++.||.|.
T Consensus        84 ~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~l  121 (284)
T 3kk8_A           84 FDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYC  121 (284)
T ss_dssp             ECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999888864   23488999999999999999863

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.61  E-value=1.6e-15  Score=104.10  Aligned_cols=110  Identities=19%  Similarity=0.269  Sum_probs=91.3

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcc---cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc---
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ---GAQEINNEVVVVAKLQHINLVRLLGFCLEREE---   97 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~---   97 (146)
                      ..++|.+.+.||+|+||.|      ..+..+|+|.+......   ....+.+|+.++..++||||+++++++.....   
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~   89 (311)
T 3ork_A           10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   89 (311)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred             ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence            3467999999999999998      45678999999754322   24568899999999999999999999876543   


Q ss_pred             -eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 -KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       ++++|||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        90 ~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~l  132 (311)
T 3ork_A           90 LPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFS  132 (311)
T ss_dssp             EEEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence             4999999999999999964   23588999999999999999873

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.61  E-value=5.6e-15  Score=99.49  Aligned_cols=109  Identities=19%  Similarity=0.240  Sum_probs=93.6

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      .++|.+.+.||+|+||.|      ..+..+++|.+.... ......+.+|+.++..++|+|++++++++...+..++++|
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            467899999999999998      357789999986432 2335678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++++|.+++..   ...+++..+..++.|++.||.|.
T Consensus        86 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~l  121 (276)
T 2yex_A           86 YCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYL  121 (276)
T ss_dssp             CCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999864   34588999999999999999874

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.61  E-value=2.3e-15  Score=101.68  Aligned_cols=115  Identities=23%  Similarity=0.326  Sum_probs=95.0

Q ss_pred             hHHHHHccCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ++|....++|...+.||+|+||.|+     .+..+++|.+.... .....+.+|+.++..++|+|++++++++. .+..+
T Consensus         6 ~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~   83 (279)
T 1qpc_A            6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIY   83 (279)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred             hhcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcE
Confidence            4566677889999999999999983     35579999986432 34677899999999999999999999875 55689


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++++|.+++... ....+++..+..++.|++.||.|.
T Consensus        84 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~l  125 (279)
T 1qpc_A           84 IITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI  125 (279)
T ss_dssp             EEEECCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999652 122488999999999999999864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.61  E-value=9.5e-15  Score=99.32  Aligned_cols=108  Identities=20%  Similarity=0.312  Sum_probs=89.8

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ++|...+.||+|+||.|      ..+..+|+|.+.....  .....+.+|+.++..++|+|++++++++...+..+++||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            47889999999999998      3577899999975432  224678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++ ++.+.+..  ....+++..+..++.|++.||.|.
T Consensus        82 ~~~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~l  117 (292)
T 3o0g_A           82 FCDQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFC  117 (292)
T ss_dssp             CCSE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9987 55555543  234589999999999999999873

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.61  E-value=8.4e-16  Score=110.38  Aligned_cols=109  Identities=19%  Similarity=0.127  Sum_probs=84.9

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      .++|...+.||+|+||.|      ..+..+|+|.+...   .......+..|+.++..++||||+++++++...+.+++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            467999999999999998      45778999998642   222345677899999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus       227 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~L  264 (446)
T 4ejn_A          227 MEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYL  264 (446)
T ss_dssp             ECCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EeeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999998864   23588999999999999999764

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.61  E-value=3.7e-15  Score=102.87  Aligned_cols=114  Identities=22%  Similarity=0.350  Sum_probs=92.3

Q ss_pred             HHccCcccceeecccCceeecC-----------CcEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC
Q 048150           29 DATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLERE   96 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~   96 (146)
                      ...++|.+.+.||+|+||.|+.           +..+|+|.+... .......+..|+.++..+.|+||+++++++...+
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  106 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence            3557899999999999999833           346999998643 2233567889999999999999999999999888


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCC----CCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEK----QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..+++|||+++|+|.+++.....    ...+++..+..++.|++.||.|.
T Consensus       107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L  156 (327)
T 2yfx_A          107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL  156 (327)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999975321    23478889999999999999873

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.61  E-value=1.1e-14  Score=98.96  Aligned_cols=108  Identities=19%  Similarity=0.303  Sum_probs=91.5

Q ss_pred             cCcccceeecccCceee-----cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++|...+.||+|+||.|     ..+..+|+|.+.....  .....+.+|+.++..++||||+++++++...+..++++||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            46889999999999998     3477899999864432  2346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++ +|.+++...  ...+++..+..++.|++.||.|.
T Consensus        82 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l  116 (288)
T 1ob3_A           82 LDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYC  116 (288)
T ss_dssp             CSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            986 899888652  34588999999999999999873

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.61  E-value=2.2e-15  Score=102.66  Aligned_cols=116  Identities=17%  Similarity=0.254  Sum_probs=81.4

Q ss_pred             HHHHccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           27 IEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      +....++|.+.+.||+|+||.|      ..+..+|+|.+.... ......+.+|+.++..++||||+++++++...+..+
T Consensus        10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   89 (303)
T 2vwi_A           10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW   89 (303)
T ss_dssp             ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred             cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence            4566789999999999999988      356789999986432 223566788999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCC-----CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEP-----EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++++|.+++...     .....+++..+..++.|++.||.|.
T Consensus        90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l  137 (303)
T 2vwi_A           90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL  137 (303)
T ss_dssp             EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999998631     1234588999999999999999864

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.60  E-value=2.8e-15  Score=104.18  Aligned_cols=108  Identities=19%  Similarity=0.316  Sum_probs=91.4

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ..+|.+.+.||+|+||.|      ..+..+|+|.+...   .......+.+|+.++..++||||+++++++...+..+++
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            467999999999999998      46778999998632   122345788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+ +|+|.+.+..   ...+++..+..++.|++.||.|.
T Consensus        88 ~E~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~L  124 (336)
T 3h4j_B           88 IEYA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYC  124 (336)
T ss_dssp             ECCC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EECC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999 6789888864   23488999999999999999873

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.60  E-value=7.5e-15  Score=99.86  Aligned_cols=110  Identities=16%  Similarity=0.240  Sum_probs=93.2

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ..++|...+.||+|+||.|      ..+..+++|.+...   .......+..|+.++..+.|+|++++++++...+..++
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   92 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV   92 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence            3467899999999999998      34678999998643   22235678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||+++++|.+++..   ...+++..+..++.|++.||.|.
T Consensus        93 v~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~l  131 (294)
T 2rku_A           93 VLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYL  131 (294)
T ss_dssp             EEECCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999998864   23588999999999999999863

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.60  E-value=7.7e-15  Score=101.70  Aligned_cols=110  Identities=21%  Similarity=0.368  Sum_probs=91.9

Q ss_pred             ccCcccceeecccCceeecCC----------cEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           31 TNKFSTDNKLGEGGFGVLPNE----------HEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~~----------~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      .++|...+.||+|+||.|+.+          ..+|+|.+.... ......+.+|+.++..++|+||+++++++...+..+
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            466888899999999999322          248999986542 223556889999999999999999999999889999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus       123 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~L  163 (333)
T 1mqb_A          123 IITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYL  163 (333)
T ss_dssp             EEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999652  34588999999999999999873

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.60  E-value=3.2e-15  Score=101.11  Aligned_cols=112  Identities=16%  Similarity=0.218  Sum_probs=91.4

Q ss_pred             HHHccCcccceeecccCceeecC---------CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           28 EDATNKFSTDNKLGEGGFGVLPN---------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v~~---------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      ....++|.+.+.||+|+||.|+.         +..+++|.+.... ......+.+|+.++..++|||++++++++ ..+.
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~   89 (281)
T 1mp8_A           11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENP   89 (281)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSS
T ss_pred             EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCc
Confidence            34557899999999999999832         3358999886432 22356788999999999999999999987 5567


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+++|||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~l  132 (281)
T 1mp8_A           90 VWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYL  132 (281)
T ss_dssp             CEEEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999652  33588999999999999999873

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.60  E-value=1e-14  Score=99.86  Aligned_cols=113  Identities=15%  Similarity=0.225  Sum_probs=92.7

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ...+|.+.+.||+|+||.|      ..|..+|+|.+....   ......+.+|+.++..++|+|++++++++...+..++
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l  109 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI  109 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence            3467999999999999998      357789999986532   2235678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||+++++|.+++... .....+++..+..++.|++.||.|.
T Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  152 (310)
T 2wqm_A          110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM  152 (310)
T ss_dssp             EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999998642 1234588999999999999999863

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.60  E-value=7.4e-15  Score=102.27  Aligned_cols=106  Identities=17%  Similarity=0.232  Sum_probs=88.9

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ..++|.+.+.||+|+||.|      ..+..+|+|.+......    ...|+.++..+ .||||+++++++...+.++++|
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            4467999999999999998      35778999999754322    24577777776 7999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+.+..   ...+++..+..++.|++.||.|.
T Consensus        96 E~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~l  132 (342)
T 2qr7_A           96 ELMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYL  132 (342)
T ss_dssp             CCCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999865   23589999999999999999863

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.60  E-value=1e-14  Score=100.35  Aligned_cols=112  Identities=17%  Similarity=0.244  Sum_probs=78.9

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ..++|...+.||+|+||.|      ..+..+|+|.+.... ......+.+|+.++..++||||+++++++...+.+++++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   82 (317)
T 2pmi_A            3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF   82 (317)
T ss_dssp             ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred             cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence            3467899999999999998      357789999986543 223567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCC---CCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPE---KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||++ |+|.+++....   ....+++..+..++.|++.||.|.
T Consensus        83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~l  124 (317)
T 2pmi_A           83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC  124 (317)
T ss_dssp             ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence            9999 59999886421   223488899999999999999873

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.60  E-value=9.2e-15  Score=98.50  Aligned_cols=110  Identities=19%  Similarity=0.312  Sum_probs=93.8

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ...+|.+.+.||+|+||.|      ..+..+++|.+....   ......+.+|+.++..++|+|++++++++...+..++
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (276)
T 2h6d_A            9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM   88 (276)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence            4478999999999999998      357789999986431   2235678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||+++++|.+++...   ..+++..+..++.|++.||.|.
T Consensus        89 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~l  127 (276)
T 2h6d_A           89 VMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYC  127 (276)
T ss_dssp             EEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999642   3478899999999999999863

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.60  E-value=2.8e-15  Score=103.31  Aligned_cols=120  Identities=18%  Similarity=0.285  Sum_probs=97.2

Q ss_pred             ccChhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEE
Q 048150           21 QFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCL   93 (146)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~   93 (146)
                      .+.+.++.....+|.+.+.||+|+||.|      ..+..+++|.+.... .....+..|+.++..+ .|+|++++++++.
T Consensus        13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   91 (326)
T 2x7f_A           13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFI   91 (326)
T ss_dssp             ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred             hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence            3445555667788999999999999998      357789999986432 3456788999999988 8999999999997


Q ss_pred             c------CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           94 E------REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        94 ~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .      .+.+++++||+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~l  145 (326)
T 2x7f_A           92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHL  145 (326)
T ss_dssp             ECC--CCCCEEEEEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eccCccccceEEEEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHH
Confidence            6      45789999999999999999753 234588899999999999999874

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.60  E-value=3.1e-15  Score=103.91  Aligned_cols=113  Identities=18%  Similarity=0.224  Sum_probs=94.6

Q ss_pred             HccCcccceeecccCceee----cCCcEEEEEEeccCCccc-----------------HHHHHHHHHHHhhCCCCCeeeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQG-----------------AQEINNEVVVVAKLQHINLVRL   88 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~~i~~l   88 (146)
                      ..++|...+.||+|+||.|    ..+..+|+|.+.......                 ...+.+|+.++..++|+|++++
T Consensus        29 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           29 YINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             EETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             ccCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            3578999999999999998    467889999986331111                 1788999999999999999999


Q ss_pred             eeEEEcCCceeEEEEecCCCCHHHh------hcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150           89 LGFCLEREEKILVYEYVPNKRLDNF------LYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        89 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      ++++...+..+++|||+++|+|.++      +.. .....+++..+..++.|++.||.|.+
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH  168 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIH  168 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999998      543 22456899999999999999997643

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.60  E-value=1.1e-14  Score=99.16  Aligned_cols=111  Identities=20%  Similarity=0.213  Sum_probs=92.8

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccCCc---------ccHHHHHHHHHHHhhCC-CCCeeeEeeEE
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---------QGAQEINNEVVVVAKLQ-HINLVRLLGFC   92 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---------~~~~~~~~e~~~l~~l~-h~~i~~l~~~~   92 (146)
                      ...++|...+.||+|+||.|      ..+..+|+|.+.....         .....+.+|+.++..+. |||++++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            34578999999999999998      3567899999865421         11345778999999995 99999999999


Q ss_pred             EcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           93 LEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        93 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ...+..++++||+++++|.+++..   ...+++..+..++.|++.||.|.
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~l  140 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICAL  140 (298)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999964   23588999999999999999873

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.60  E-value=1.2e-14  Score=100.42  Aligned_cols=120  Identities=19%  Similarity=0.232  Sum_probs=97.7

Q ss_pred             cChhHHHHHccCcccc-eeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhC-CCCCeeeEeeE
Q 048150           22 FDFETIEDATNKFSTD-NKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKL-QHINLVRLLGF   91 (146)
Q Consensus        22 ~~~~~~~~~~~~~~~~-~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~   91 (146)
                      ..++........|.+. +.||+|+||.|      ..+..+|+|.+...  .......+.+|+.++..+ .|+++++++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~   97 (327)
T 3lm5_A           18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV   97 (327)
T ss_dssp             CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence            3445555666677776 88999999998      35789999998643  233467888999999998 56999999999


Q ss_pred             EEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           92 CLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        92 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +...+..++++||+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus        98 ~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~L  147 (327)
T 3lm5_A           98 YENTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYL  147 (327)
T ss_dssp             EECSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999998652 334589999999999999999874

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.60  E-value=7.3e-15  Score=101.85  Aligned_cols=110  Identities=16%  Similarity=0.240  Sum_probs=93.5

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ..++|...+.||+|+||.|      ..+..+++|.+...   .......+..|+.++..+.|+||+++++++...+..++
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            3467999999999999998      34678999998643   22335678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||+++++|.+++..   ...+++..+..++.|++.||.|.
T Consensus       119 v~e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~L  157 (335)
T 2owb_A          119 VLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYL  157 (335)
T ss_dssp             EECCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999998864   23588999999999999999873

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.60  E-value=1.9e-14  Score=97.55  Aligned_cols=109  Identities=27%  Similarity=0.445  Sum_probs=89.8

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCccc-------HHHHHHHHHHHhhCCCCCeeeEeeEEEcCC
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQG-------AQEINNEVVVVAKLQHINLVRLLGFCLERE   96 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~   96 (146)
                      ..++|...+.||+|+||.|      ..+..+|+|.+.......       ...+.+|+.++..++|+|++++++++....
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   96 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP   96 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred             hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence            3477999999999999998      357789999986432221       267889999999999999999999885544


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                        +++|||+++|+|.+.+...  ...+++..+..++.|++.||.|.
T Consensus        97 --~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~l  138 (287)
T 4f0f_A           97 --RMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYM  138 (287)
T ss_dssp             --EEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             --eEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHH
Confidence              7999999999999988653  34589999999999999999874

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.59  E-value=9.4e-15  Score=100.21  Aligned_cols=110  Identities=19%  Similarity=0.235  Sum_probs=93.2

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcc---cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ---GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ...+|.+.+.||+|+||.|      ..+..+++|.+......   ....+.+|+.++..++|||++++++++...+..++
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV  111 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence            4478999999999999998      35678999998644222   24678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||+++++|.+++..   ...+++..+..++.|++.||.|.
T Consensus       112 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~l  150 (309)
T 2h34_A          112 DMRLINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAA  150 (309)
T ss_dssp             EEECCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999964   23488999999999999999873

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.59  E-value=6e-15  Score=102.05  Aligned_cols=112  Identities=19%  Similarity=0.285  Sum_probs=90.2

Q ss_pred             HHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           27 IEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ--GAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      .....++|...+.||+|+||.|      ..+..+|+|.+......  ....+.+|+.++..++|+||+++++++...+.+
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (329)
T 3gbz_A           29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL  108 (329)
T ss_dssp             ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred             cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence            3445578999999999999998      45678999998644322  245677999999999999999999999999999


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|||+++ +|.+++..   ...+++..+..++.|++.||.|.
T Consensus       109 ~lv~e~~~~-~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~L  148 (329)
T 3gbz_A          109 HLIFEYAEN-DLKKYMDK---NPDVSMRVIKSFLYQLINGVNFC  148 (329)
T ss_dssp             EEEEECCSE-EHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCC-CHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999985 99999864   33488999999999999999873

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.59  E-value=8e-15  Score=104.62  Aligned_cols=110  Identities=15%  Similarity=0.197  Sum_probs=89.8

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccCCc--------ccHHHHHHHHHHHhhCCCCCeeeEeeEEEc
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--------QGAQEINNEVVVVAKLQHINLVRLLGFCLE   94 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~   94 (146)
                      ...++|...+.||+|+||.|      ..+..+|+|.+.....        .....+.+|+.++..++||||+++++++. 
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            45678999999999999998      3567899999864311        11224789999999999999999999875 


Q ss_pred             CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           95 REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        95 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+..+++|||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~L  255 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYL  255 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCceEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            4558999999999999998864   34589999999999999999873

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.59  E-value=2.7e-15  Score=103.31  Aligned_cols=118  Identities=19%  Similarity=0.324  Sum_probs=88.5

Q ss_pred             hHHHHHccCcccceeecccCceeecC------C---cEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEE
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVLPN------E---HEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCL   93 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v~~------~---~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~   93 (146)
                      +++....++|...+.||+|+||.|+.      +   ..+|+|.+...  .......+.+|+.++..++|+|++++++++.
T Consensus        16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   95 (323)
T 3qup_A           16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL   95 (323)
T ss_dssp             CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEE
T ss_pred             hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceee
Confidence            44455667899999999999999832      2   26899998654  2234577899999999999999999999998


Q ss_pred             cCCce------eEEEEecCCCCHHHhhcCCC---CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           94 EREEK------ILVYEYVPNKRLDNFLYEPE---KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        94 ~~~~~------~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .....      ++++||+++|+|.+++....   ....+++..+..++.|++.||.|.
T Consensus        96 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L  153 (323)
T 3qup_A           96 RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL  153 (323)
T ss_dssp             CC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHH
Confidence            76554      89999999999999986421   223588999999999999999873

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.59  E-value=1.1e-14  Score=99.92  Aligned_cols=111  Identities=17%  Similarity=0.289  Sum_probs=88.5

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ....++|...+.||+|+||.|      ..|..+++|.+...  .....+.+|+.++..+.|+|++++++.+...+..+++
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV  102 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence            445678999999999999998      34788999998643  2456788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+++++|.+++..  ....+++..+..++.+++.||.|.
T Consensus       103 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~l  141 (314)
T 3com_A          103 MEYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYL  141 (314)
T ss_dssp             EECCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999863  234588999999999999999874

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.59  E-value=1.6e-14  Score=99.86  Aligned_cols=100  Identities=21%  Similarity=0.288  Sum_probs=86.7

Q ss_pred             ceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC-CCCeeeEeeEEEcCCceeEEEEecCCCC
Q 048150           37 DNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ-HINLVRLLGFCLEREEKILVYEYVPNKR  109 (146)
Q Consensus        37 ~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~~~~lv~e~~~~g~  109 (146)
                      .+.||+|+||.|      ..+..+|+|.+..   .......+|+.++..+. ||||+++++++......+++|||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            478999999998      3577899999853   24566778999999996 9999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          110 LDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       110 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |.+++..   ...+++..+..++.|++.||.|.
T Consensus        93 L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~L  122 (325)
T 3kn6_A           93 LFERIKK---KKHFSETEASYIMRKLVSAVSHM  122 (325)
T ss_dssp             HHHHHHH---CSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999965   34589999999999999999873

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.59  E-value=3.8e-15  Score=104.90  Aligned_cols=110  Identities=20%  Similarity=0.180  Sum_probs=84.2

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHH-HhhCCCCCeeeEeeEEEcCCcee
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVV-VAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~-l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ..++|...+.||+|+||.|      ..+..+|+|.+.....   .....+..|..+ +..+.||||+++++++...+.++
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~  115 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY  115 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence            3467999999999999998      3567899999864321   223445566665 56689999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus       116 lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~L  155 (373)
T 2r5t_A          116 FVLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYL  155 (373)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999864   23478889999999999999873

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.59  E-value=9.7e-15  Score=101.88  Aligned_cols=108  Identities=26%  Similarity=0.325  Sum_probs=90.2

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcc---cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ---GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ..|...+.||+|+||.|      ..+..+|+|.+......   ....+.+|+.++..++|||++++++++...+..+++|
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            45888999999999998      45678999998654322   2456889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+. |++.+++...  ...+++..+..++.|++.||.|.
T Consensus       134 e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~L  170 (348)
T 1u5q_A          134 EYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYL  170 (348)
T ss_dssp             ECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9998 5888877532  34588999999999999999873

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.59  E-value=2.5e-14  Score=98.42  Aligned_cols=106  Identities=23%  Similarity=0.309  Sum_probs=89.6

Q ss_pred             CcccceeecccCceee----c------CCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC--Ccee
Q 048150           33 KFSTDNKLGEGGFGVL----P------NEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLER--EEKI   99 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v----~------~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~--~~~~   99 (146)
                      .|...+.||+|+||.|    +      .+..+|+|.+.... ......+.+|+.++..++|+|++++++++...  ..++
T Consensus        32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  111 (318)
T 3lxp_A           32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ  111 (318)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred             HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence            3589999999999998    2      56789999997542 23356788999999999999999999999874  5689


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|||+++|+|.+++...    .+++..+..++.|++.||.|.
T Consensus       112 lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~L  150 (318)
T 3lxp_A          112 LVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYL  150 (318)
T ss_dssp             EEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999642    388999999999999999873

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.59  E-value=2e-14  Score=99.17  Aligned_cols=111  Identities=26%  Similarity=0.434  Sum_probs=90.2

Q ss_pred             cCcccceeecccCceeec------CCcE--EEEEEeccC-CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEE
Q 048150           32 NKFSTDNKLGEGGFGVLP------NEHE--IAVKRLSRS-SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~------~~~~--~a~k~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ++|...+.||+|+||.|+      .+..  +++|.+... .......+..|+.++..+ +|||++++++++...+..+++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            678999999999999983      3443  488888643 222355688999999999 899999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCC-------------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPE-------------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+++|+|.+++....             ....+++..+..++.|++.||.|.
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  158 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL  158 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999997532             124589999999999999999874

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.58  E-value=7.6e-15  Score=99.04  Aligned_cols=112  Identities=17%  Similarity=0.246  Sum_probs=92.7

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEc--CCceeE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLE--REEKIL  100 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~--~~~~~l  100 (146)
                      .++|...+.||+|+||.|      ..+..+++|.+....  ......+..|+.++..++|+|++++++.+..  .+.+++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            467899999999999988      357789999987542  2235678899999999999999999998754  567899


Q ss_pred             EEEecCCCCHHHhhcCCC-CCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPE-KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||+++++|.+++.... ....+++..+..++.|++.||.|.
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l  127 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC  127 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999996522 233488999999999999999874

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.58  E-value=3.1e-14  Score=96.56  Aligned_cols=109  Identities=23%  Similarity=0.398  Sum_probs=89.7

Q ss_pred             ccCcccce-eecccCceeec--------CCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           31 TNKFSTDN-KLGEGGFGVLP--------NEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        31 ~~~~~~~~-~lg~g~fg~v~--------~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      .++|.+.+ .||+|+||.|+        .+..+|+|.+.... ......+.+|+.++..++|||++++++++ ..+..++
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l   86 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML   86 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence            35566666 99999999983        45579999997542 23466788999999999999999999998 5567899


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||+++++|.+++..  ....+++..+..++.|++.||.|.
T Consensus        87 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~l  126 (287)
T 1u59_A           87 VMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYL  126 (287)
T ss_dssp             EEECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999964  234588999999999999999874

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.58  E-value=7.4e-15  Score=99.19  Aligned_cols=109  Identities=24%  Similarity=0.374  Sum_probs=92.0

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      .++|.+.+.||+|+||.|      ..+..+++|.+....   ......+.+|+.++..++|+|++++++++...+..+++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            467899999999999998      345689999985321   12345688999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        88 ~e~~~~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~L  125 (279)
T 3fdn_A           88 LEYAPLGTVYRELQK---LSKFDEQRTATYITELANALSYC  125 (279)
T ss_dssp             ECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999864   23488999999999999999763

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.58  E-value=7e-15  Score=100.83  Aligned_cols=125  Identities=22%  Similarity=0.334  Sum_probs=93.1

Q ss_pred             cccccChhHHHHHccCcccceeecccCceeec---------CCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCee
Q 048150           18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVLP---------NEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLV   86 (146)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~lg~g~fg~v~---------~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~   86 (146)
                      +...-...++....++|...+.||+|+||.|+         .+..+|+|.+....  ......+.+|+.++..++|||++
T Consensus        20 eel~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv   99 (313)
T 3brb_A           20 EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI   99 (313)
T ss_dssp             ----CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBC
T ss_pred             HhhhhhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCee
Confidence            34444555666677889999999999999983         23379999986442  22346788999999999999999


Q ss_pred             eEeeEEEcCC-----ceeEEEEecCCCCHHHhhcCC---CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           87 RLLGFCLERE-----EKILVYEYVPNKRLDNFLYEP---EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        87 ~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++++...+     ..++++||+++|+|.+++...   .....+++..+..++.|++.||.|.
T Consensus       100 ~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  163 (313)
T 3brb_A          100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL  163 (313)
T ss_dssp             CCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHH
Confidence            9999987654     359999999999999998431   2334589999999999999999864

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.58  E-value=1.1e-14  Score=98.97  Aligned_cols=115  Identities=21%  Similarity=0.365  Sum_probs=92.1

Q ss_pred             hHHHHHccCcccceeecccCceeec---CCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVLP---NEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v~---~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ..++....+|.+.+.||+|+||.|+   ....+++|.+....  ......+.+|+.++..++|+|++.++++. ..+..+
T Consensus        17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~   95 (289)
T 3og7_A           17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA   95 (289)
T ss_dssp             -CCBCCTTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCE
T ss_pred             CCCccCccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccE
Confidence            3445566889999999999999993   34579999986543  22356788999999999999999999854 566789


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++++|.+++...  ...+++..+..++.|++.||.|.
T Consensus        96 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~l  136 (289)
T 3og7_A           96 IVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYL  136 (289)
T ss_dssp             EEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999653  34588999999999999999874

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.58  E-value=1.8e-14  Score=99.65  Aligned_cols=109  Identities=23%  Similarity=0.329  Sum_probs=91.9

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ--GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .++|...+.||+|+||.|      ..+..+|+|.+......  ....+.+|+.++..++|+|++++++++...+..+++|
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            367899999999999998      34778999998644322  2455779999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++++|.+++..   ...+++..+..++.|++.||.|.
T Consensus       104 e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~L  140 (331)
T 4aaa_A          104 EFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFC  140 (331)
T ss_dssp             ECCSEEHHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCcchHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999887654   33488999999999999999863

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.58  E-value=8.1e-15  Score=101.33  Aligned_cols=107  Identities=17%  Similarity=0.140  Sum_probs=90.6

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ..+|.+.+.||+|+||.|      ..+..+|+|.+....  ....+..|+.++..+ .|++++++++++...+..+++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            468999999999999998      456789999986432  234577899999999 99999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+ +++|.+++...  ...+++..+..++.|++.||.|.
T Consensus        86 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~L  121 (330)
T 2izr_A           86 LL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYV  121 (330)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99 89999999753  34589999999999999999873

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.58  E-value=2e-14  Score=97.52  Aligned_cols=111  Identities=20%  Similarity=0.267  Sum_probs=94.8

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ...++|.+.+.||+|+||.|      ..+..+++|.+...  .......+.+|+.++..++|+|++++++++...+..++
T Consensus        19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            34468999999999999998      35778999998643  23346788999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||+++++|.+.+...   ..+++..+..++.|++.||.|.
T Consensus        99 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~L  137 (287)
T 2wei_A           99 VGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYM  137 (287)
T ss_dssp             EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999988642   3488999999999999999873

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.58  E-value=3.7e-14  Score=96.56  Aligned_cols=107  Identities=16%  Similarity=0.206  Sum_probs=87.3

Q ss_pred             HccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhh--CCCCCeeeEeeEEEcC----Ccee
Q 048150           30 ATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAK--LQHINLVRLLGFCLER----EEKI   99 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~l~~~~~~~----~~~~   99 (146)
                      ..++|.+.+.||+|+||.|    ..+..+|+|.+..   .....+..|..++..  ++|||++++++.+...    ..++
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECG---GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEecc---ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            3568999999999999998    5677899999853   244555667666665  7999999999886543    4589


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      +++||+++|+|.+++..    ..+++..+..++.|++.||.|.+
T Consensus        83 lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH  122 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLH  122 (301)
T ss_dssp             EEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             EehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999953    34889999999999999998765

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.57  E-value=1.6e-14  Score=101.17  Aligned_cols=113  Identities=12%  Similarity=0.061  Sum_probs=92.7

Q ss_pred             HHHHccCcccceeecccCceeecC-----------CcEEEEEEeccCCcccHHHHHHHHHHHhhCC---CCCeeeEeeEE
Q 048150           27 IEDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ---HINLVRLLGFC   92 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~l~~~~   92 (146)
                      +....++|.+.+.||+|+||.|+.           +..+|+|.+...   ....+..|..++..+.   |++++.+++.+
T Consensus        60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~  136 (365)
T 3e7e_A           60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAH  136 (365)
T ss_dssp             EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred             EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence            344457799999999999999833           457999998643   4556778888888776   89999999999


Q ss_pred             EcCCceeEEEEecCCCCHHHhhcCCC--CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           93 LEREEKILVYEYVPNKRLDNFLYEPE--KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        93 ~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ...+..++||||+++|+|.+++....  ....+++..+..++.|++.||.|.
T Consensus       137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~l  188 (365)
T 3e7e_A          137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV  188 (365)
T ss_dssp             ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999996321  234589999999999999999864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.57  E-value=2.3e-14  Score=100.12  Aligned_cols=119  Identities=12%  Similarity=0.142  Sum_probs=96.0

Q ss_pred             ccChhHHHHHccCcccceeecccCceee-----cCCcEEEEEEeccCCcc-----------cHHHHHHHHHHHhhCCCCC
Q 048150           21 QFDFETIEDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQ-----------GAQEINNEVVVVAKLQHIN   84 (146)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~-----------~~~~~~~e~~~l~~l~h~~   84 (146)
                      .....++....++|.+.+.||+|+||.|     ..|..+|+|.+......           ....+.+|+.++..++|||
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   90 (362)
T 3pg1_A           11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN   90 (362)
T ss_dssp             HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred             HHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence            3445677888899999999999999998     45778999998532111           1367889999999999999


Q ss_pred             eeeEeeEEEcC-----CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           85 LVRLLGFCLER-----EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        85 i~~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++++++...     ..+++++||++ |+|.+.+..  ....+++..+..++.|++.||.|.
T Consensus        91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~l  150 (362)
T 3pg1_A           91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVL  150 (362)
T ss_dssp             BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHH
Confidence            99999998542     35799999998 588888865  234589999999999999999873

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.57  E-value=2.6e-15  Score=103.67  Aligned_cols=114  Identities=27%  Similarity=0.361  Sum_probs=92.3

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC-CCCeeeEeeEEEc------
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ-HINLVRLLGFCLE------   94 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~------   94 (146)
                      .....+|.+.+.||+|+||.|      ..+..+|+|.+..........+..|+.++..+. |+||+++++++..      
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~  103 (337)
T 3ll6_A           24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD  103 (337)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred             eccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence            344567999999999999998      367789999986555555677889999999995 9999999999842      


Q ss_pred             --CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           95 --REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        95 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                        ...+++++||+. |+|.+++........+++..+..++.|++.||.|.
T Consensus       104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~L  152 (337)
T 3ll6_A          104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM  152 (337)
T ss_dssp             TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence              334789999997 68999886533344589999999999999999874

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.57  E-value=1.1e-14  Score=98.60  Aligned_cols=109  Identities=23%  Similarity=0.405  Sum_probs=92.1

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      .++|...+.||+|+||.|      ..+..+++|.+....   ......+.+|+.++..++|+|++++++++...+..+++
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            367899999999999998      345679999985421   22346788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+++|+|.+++...   ..+++..+..++.|++.||.|.
T Consensus        93 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~l  130 (284)
T 2vgo_A           93 LEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYC  130 (284)
T ss_dssp             ECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999998652   3488999999999999999763

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.57  E-value=2e-14  Score=97.74  Aligned_cols=108  Identities=24%  Similarity=0.306  Sum_probs=88.1

Q ss_pred             CcccceeecccCceeecC------Cc---EEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce-eEE
Q 048150           33 KFSTDNKLGEGGFGVLPN------EH---EIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK-ILV  101 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v~~------~~---~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~-~lv  101 (146)
                      .|...+.||+|+||.|+.      +.   .+++|.+..... .....+.+|+.++..++|+|++++++++...+.. +++
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            355678999999999942      22   689999865332 3356788999999999999999999999876654 899


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+.+|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus       102 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~L  140 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYL  140 (298)
T ss_dssp             ECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHH
T ss_pred             EecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999753  34578899999999999999863

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.57  E-value=2.2e-14  Score=98.82  Aligned_cols=109  Identities=15%  Similarity=0.193  Sum_probs=87.6

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCc--------ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--------QGAQEINNEVVVVAKLQHINLVRLLGFCLER   95 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~   95 (146)
                      ..++|.+.+.||+|+||.|      ..+..+|+|.+.....        .....+..|+.++..+.|+||+++++++...
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   87 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE   87 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence            3467899999999999998      3467899999864321        1123478999999999999999999988655


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      + .++++||+++++|.+++..   ...+++..+..++.|++.||.|.
T Consensus        88 ~-~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~l  130 (322)
T 2ycf_A           88 D-YYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYL  130 (322)
T ss_dssp             S-EEEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             c-eEEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            4 8999999999999998864   34588999999999999999874

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.57  E-value=1.2e-14  Score=98.94  Aligned_cols=109  Identities=21%  Similarity=0.308  Sum_probs=90.1

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc----------
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLE----------   94 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~----------   94 (146)
                      .++|...+.||+|+||.|      ..+..+++|.+... ......+.+|+.++..++|||++++++.+..          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            467899999999999998      35778999998532 2335678899999999999999999998754          


Q ss_pred             ---CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           95 ---REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        95 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                         .+..++++||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~L  132 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYI  132 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHH
Confidence               34589999999999999999752  33477888999999999999874

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.57  E-value=1.2e-14  Score=98.86  Aligned_cols=111  Identities=22%  Similarity=0.327  Sum_probs=89.7

Q ss_pred             HHHccCcccce-eecccCceeecC--------CcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC
Q 048150           28 EDATNKFSTDN-KLGEGGFGVLPN--------EHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLERE   96 (146)
Q Consensus        28 ~~~~~~~~~~~-~lg~g~fg~v~~--------~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~   96 (146)
                      .....+|.+.+ .||+|+||.|+.        +..+++|.+.....  .....+..|+.++..++|+|++++++++ ..+
T Consensus        12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~   90 (291)
T 1xbb_A           12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE   90 (291)
T ss_dssp             BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESS
T ss_pred             eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCC
Confidence            33456788877 999999999843        35799999865422  2256788999999999999999999998 567


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..++++||+++++|.+++..   ...+++..+..++.|++.||.|.
T Consensus        91 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~L  133 (291)
T 1xbb_A           91 SWMLVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYL  133 (291)
T ss_dssp             SEEEEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999965   23488999999999999999874

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.57  E-value=2.6e-14  Score=97.04  Aligned_cols=109  Identities=18%  Similarity=0.171  Sum_probs=89.7

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc----CCce
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLE----REEK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~----~~~~   98 (146)
                      ...|.+.+.||+|+||.|      ..+..+++|.+...  .......+..|+.++..++|||++++++++..    ...+
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  104 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI  104 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence            345888899999999998      34567999998643  23335678899999999999999999998865    3458


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus       105 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~l  145 (290)
T 1t4h_A          105 VLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFL  145 (290)
T ss_dssp             EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999964   23488999999999999999874

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.56  E-value=5.2e-14  Score=97.48  Aligned_cols=116  Identities=16%  Similarity=0.194  Sum_probs=95.8

Q ss_pred             ccChhHHHHHccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhh--CCCCCeeeEeeEEEc
Q 048150           21 QFDFETIEDATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAK--LQHINLVRLLGFCLE   94 (146)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~l~~~~~~   94 (146)
                      ..+........++|.+.+.||+|+||.|    ..+..+|+|.+..   .....+..|..++..  ++|+|++++++++..
T Consensus        31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~  107 (342)
T 1b6c_B           31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNK  107 (342)
T ss_dssp             SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred             CCceeecccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence            4444445666788999999999999998    4577899999853   245567788888877  689999999999987


Q ss_pred             CC----ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150           95 RE----EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        95 ~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      .+    .+++++||+++|+|.+++..    ..+++..+..++.|++.||.|.+
T Consensus       108 ~~~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH  156 (342)
T 1b6c_B          108 DNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLH  156 (342)
T ss_dssp             CCSSCCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCccceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHH
Confidence            75    78999999999999999964    24889999999999999997754

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.56  E-value=3.3e-14  Score=96.78  Aligned_cols=109  Identities=19%  Similarity=0.285  Sum_probs=89.4

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ++|...+.||+|+||.|      ..+..+++|.+....  ......+.+|+.++..++|+|++++++++...+..++++|
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            57899999999999998      357889999986432  2234678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |++ ++|.+++... ....+++..+..++.|++.||.|.
T Consensus        83 ~~~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~l  119 (299)
T 2r3i_A           83 FLH-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFC  119 (299)
T ss_dssp             CCS-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccc-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHH
Confidence            998 5999988653 234578899999999999999873

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.56  E-value=3.1e-14  Score=99.88  Aligned_cols=111  Identities=17%  Similarity=0.248  Sum_probs=93.2

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccCCcc--------cHHHHHHHHHHHhhC-CCCCeeeEeeEE
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ--------GAQEINNEVVVVAKL-QHINLVRLLGFC   92 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~--------~~~~~~~e~~~l~~l-~h~~i~~l~~~~   92 (146)
                      .....+|...+.||+|+||.|      ..|..+|+|++......        ....+..|+.++..+ .||||+++++++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            444567999999999999998      35789999998654311        134577899999998 899999999999


Q ss_pred             EcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           93 LEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        93 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ......+++|||+++++|.+++..   ...+++..+..++.|++.||.|
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~  215 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSF  215 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHH
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999864   2358899999999999999976

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.56  E-value=3.7e-14  Score=97.20  Aligned_cols=107  Identities=21%  Similarity=0.294  Sum_probs=85.2

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEE-----------
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCL-----------   93 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~-----------   93 (146)
                      .++|...+.||+|+||.|      ..+..+|+|.+..........+.+|+.++..++|+|++++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            477999999999999998      347789999987665555678899999999999999999998873           


Q ss_pred             ---cCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           94 ---EREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        94 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                         ..+..++++||++ |+|.+++.+    ..+++..+..++.|++.||.|.
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~l  136 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYI  136 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHH
Confidence               3356899999998 599999853    3478899999999999999873

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.56  E-value=3.4e-14  Score=101.71  Aligned_cols=109  Identities=16%  Similarity=0.247  Sum_probs=91.4

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC-----C
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLER-----E   96 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~-----~   96 (146)
                      ..++|.+.+.||+|+||.|      ..+..+|+|.+....  ......+.+|+.++..++|+||+++++++...     +
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~  103 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD  103 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence            3578999999999999998      456789999996432  22356788999999999999999999998765     5


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+++|+||+++ +|.+++..   ...+++..+..++.|++.||.|.
T Consensus       104 ~~~lv~e~~~~-~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~L  145 (432)
T 3n9x_A          104 ELYIVLEIADS-DLKKLFKT---PIFLTEEHIKTILYNLLLGENFI  145 (432)
T ss_dssp             CEEEEEECCSE-EHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCc-CHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            68999999874 99999965   34589999999999999999873

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.56  E-value=2.3e-14  Score=103.18  Aligned_cols=108  Identities=14%  Similarity=0.260  Sum_probs=81.2

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC-----Cc
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLER-----EE   97 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~-----~~   97 (146)
                      .++|.+.+.||+|+||.|      ..+..+|+|.+....  ......+.+|+.++..++|+||+++++++...     ..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            367999999999999998      356789999986432  22356788999999999999999999998543     46


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++||+. |+|.+++..   ...+++..+..++.||+.||.|.
T Consensus       132 ~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~L  172 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYV  172 (458)
T ss_dssp             EEEEECCCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeccc-cchhhhccc---CCCCCHHHHHHHHHHHHHHHHHH
Confidence            899999875 689998865   34589999999999999999873

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.55  E-value=4.5e-14  Score=96.13  Aligned_cols=111  Identities=20%  Similarity=0.292  Sum_probs=89.6

Q ss_pred             HccCcccceeecccCceeecCC---------cEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEE-cCCce
Q 048150           30 ATNKFSTDNKLGEGGFGVLPNE---------HEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCL-EREEK   98 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~~~---------~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~-~~~~~   98 (146)
                      ...+|...+.||+|+||.|+.+         ..+++|.+.... ......+.+|+.++..++|+|++++++++. ..+..
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  102 (298)
T 3f66_A           23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP  102 (298)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred             cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence            3456888999999999999422         247899886432 233567889999999999999999999865 45678


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus       103 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~l  144 (298)
T 3f66_A          103 LVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYL  144 (298)
T ss_dssp             EEEEECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999753  34478899999999999999863

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.55  E-value=3.5e-14  Score=98.14  Aligned_cols=109  Identities=23%  Similarity=0.358  Sum_probs=86.2

Q ss_pred             ccCcccceeecccCceeecC------Cc----EEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           31 TNKFSTDNKLGEGGFGVLPN------EH----EIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~------~~----~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      .++|...+.||+|+||.|+.      +.    .+++|.+... .......+.+|+.++..++|+||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~   92 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence            36689999999999999932      22    3588877533 2334678899999999999999999999987654 78


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++++++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus        93 ~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~L  133 (327)
T 3poz_A           93 LITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYL  133 (327)
T ss_dssp             EEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999753  34588999999999999999874

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.55  E-value=1.8e-14  Score=97.33  Aligned_cols=108  Identities=19%  Similarity=0.304  Sum_probs=89.2

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc---------
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLE---------   94 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~---------   94 (146)
                      ...+|...+.||+|+||.|      ..+..+++|.+....    ..+.+|+.++..++|||++++++++..         
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            4467899999999999988      357889999986432    346689999999999999999998754         


Q ss_pred             -------CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           95 -------REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        95 -------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                             ...+++++||+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~l  138 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYI  138 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHH
Confidence                   34479999999999999999652 234588999999999999999863

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.55  E-value=1.7e-14  Score=101.56  Aligned_cols=108  Identities=20%  Similarity=0.295  Sum_probs=87.5

Q ss_pred             CcccceeecccCceeecCC---------cEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc-CCceeEE
Q 048150           33 KFSTDNKLGEGGFGVLPNE---------HEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLE-REEKILV  101 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v~~~---------~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~-~~~~~lv  101 (146)
                      .|...+.||+|+||.|+.+         ..+++|.+... .......+.+|+.++..++||||+++++++.. .+..+++
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            3667889999999999422         25789988643 22345778999999999999999999998754 4578999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus       170 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~L  208 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFL  208 (373)
T ss_dssp             EECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999753  33478889999999999999873

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.55  E-value=1.2e-15  Score=104.72  Aligned_cols=122  Identities=13%  Similarity=0.225  Sum_probs=99.2

Q ss_pred             ccccChhHHHHHccCcccceeecccCceeec---CCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEE
Q 048150           19 SLQFDFETIEDATNKFSTDNKLGEGGFGVLP---NEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCL   93 (146)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~lg~g~fg~v~---~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~   93 (146)
                      .......++....++|...+.||+|+||.|+   ....+++|.+....  ......+.+|+.++..++|+|++++++++.
T Consensus        20 ~~~~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   99 (319)
T 2y4i_B           20 QTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM   99 (319)
T ss_dssp             --CCCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE
T ss_pred             ccccccccccCCHHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe
Confidence            3345557777788999999999999999983   23468999986432  223455678899999999999999999999


Q ss_pred             cCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           94 EREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        94 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..+..++++||+++++|.+++...  ...+++..+..++.|++.||.|.
T Consensus       100 ~~~~~~iv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~l  146 (319)
T 2y4i_B          100 SPPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYL  146 (319)
T ss_dssp             CSSCEEEECBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             cCCceEEEeecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999653  33588899999999999999873

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.55  E-value=9.7e-15  Score=109.12  Aligned_cols=112  Identities=19%  Similarity=0.271  Sum_probs=91.0

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc------CCc
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLE------REE   97 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~------~~~   97 (146)
                      ..+|.+.+.||+|+||.|      ..|..+|+|.+... .......+.+|+.++..++||||+++++++..      .+.
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            378999999999999998      34678999998653 23335678899999999999999999988755      567


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .++++||+++|+|.+++........+++..+..++.+++.||.|.
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yL  137 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL  137 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            899999999999999998654444688899999999999999873

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.55  E-value=2.7e-14  Score=101.34  Aligned_cols=105  Identities=17%  Similarity=0.203  Sum_probs=83.5

Q ss_pred             cCcccc-eeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHh-hCCCCCeeeEeeEEEc----CCcee
Q 048150           32 NKFSTD-NKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVA-KLQHINLVRLLGFCLE----REEKI   99 (146)
Q Consensus        32 ~~~~~~-~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~-~l~h~~i~~l~~~~~~----~~~~~   99 (146)
                      .+|... +.||+|+||.|      ..+..+|+|.+..     ...+.+|+.++. ..+|+||+++++++..    ...++
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            455555 68999999998      4577899999852     245667887764 4589999999998865    55689


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||||+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus       136 lv~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~L  177 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYL  177 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999763 234589999999999999999874

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.55  E-value=1.2e-14  Score=100.80  Aligned_cols=110  Identities=20%  Similarity=0.272  Sum_probs=92.0

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcc--------cHHHHHHHHHHHhhCCCCCeeeEeeEEEcC
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ--------GAQEINNEVVVVAKLQHINLVRLLGFCLER   95 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~--------~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~   95 (146)
                      ...+|...+.||+|+||.|      ..+..+|+|.+......        ....+..|+.++..++|+||+++++++...
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            3467999999999999998      45678999998754211        233567899999999999999999999999


Q ss_pred             CceeEEEEecCCC-CHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNK-RLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +..++++||+..| +|.+++..   ...+++..+..++.|++.||.|.
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~L  146 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYL  146 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999998777 99999865   33589999999999999999874

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.55  E-value=1.1e-13  Score=95.48  Aligned_cols=103  Identities=17%  Similarity=0.240  Sum_probs=89.1

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC-CCCeeeEeeEEEc--CCceeEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ-HINLVRLLGFCLE--REEKILV  101 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~--~~~~~lv  101 (146)
                      .++|.+.+.||+|+||.|      ..+..+|+|.+..   .....+.+|+.++..+. |+|++++++++..  ....+++
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            367999999999999998      4567899999863   34577889999999996 9999999999987  5668999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+++++|.+++..      +++..+..++.|++.||.|.
T Consensus       112 ~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~l  146 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYC  146 (330)
T ss_dssp             EECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHH
T ss_pred             EeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHH
Confidence            999999999998843      78889999999999999873

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.55  E-value=3.3e-15  Score=100.90  Aligned_cols=112  Identities=23%  Similarity=0.279  Sum_probs=91.0

Q ss_pred             HHHccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC-CceeEEE
Q 048150           28 EDATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER-EEKILVY  102 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~-~~~~lv~  102 (146)
                      ....++|...+.||+|+||.|    ..|..+++|.+...  ...+.+.+|+.++..++|+|++++++++... +..++++
T Consensus        17 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~   94 (278)
T 1byg_A           17 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   94 (278)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             cCChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence            344578999999999999998    46778999998643  3567788999999999999999999987654 4789999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus        95 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~l  133 (278)
T 1byg_A           95 EYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYL  133 (278)
T ss_dssp             CCCTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999642 122378888999999999999863

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.55  E-value=7.1e-15  Score=102.75  Aligned_cols=108  Identities=18%  Similarity=0.192  Sum_probs=91.1

Q ss_pred             cCcccceeecccCceeec---------CCcEEEEEEeccCC----cccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCc
Q 048150           32 NKFSTDNKLGEGGFGVLP---------NEHEIAVKRLSRSS----SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREE   97 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~---------~~~~~a~k~~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~   97 (146)
                      .+|...+.||+|+||.|+         .+..+|+|.+....    ......+..|+.++..+ +|++|+++++++...+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            679999999999999983         57789999986431    12345567888899988 79999999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+++|||+++|+|.+++...   ..+++..+..++.|++.||.|.
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~L  175 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHL  175 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999652   3488999999999999999873

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.55  E-value=4e-14  Score=98.74  Aligned_cols=122  Identities=20%  Similarity=0.193  Sum_probs=82.0

Q ss_pred             ChhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC
Q 048150           23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLERE   96 (146)
Q Consensus        23 ~~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~   96 (146)
                      .-.......++|.+.+.||+|+||.|      ..+..+|+|.+.... ........++..+..++|+||+++++++...+
T Consensus        14 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~   92 (360)
T 3e3p_A           14 ADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLG   92 (360)
T ss_dssp             SSHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred             hhhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence            33455667789999999999999998      357789999885432 23345667777788889999999999987543


Q ss_pred             c-------eeEEEEecCCCCHHHhhcC-CCCCCCCChHHHHHHHHHHHHHHhhhccCC
Q 048150           97 E-------KILVYEYVPNKRLDNFLYE-PEKQGQWDCSRRYKIIGGRGRDCSRNFLFS  146 (146)
Q Consensus        97 ~-------~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~  146 (146)
                      .       ++++|||+++ +|...+.. ......+++..+..++.|++.||.|.|+|+
T Consensus        93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  149 (360)
T 3e3p_A           93 ERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS  149 (360)
T ss_dssp             SSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT
T ss_pred             cccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            3       7899999997 55444432 123445788899999999999998876543

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.55  E-value=4.5e-14  Score=97.53  Aligned_cols=114  Identities=14%  Similarity=0.208  Sum_probs=90.4

Q ss_pred             ChhHHHHHccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhh--CCCCCeeeEeeEEEcC-
Q 048150           23 DFETIEDATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAK--LQHINLVRLLGFCLER-   95 (146)
Q Consensus        23 ~~~~~~~~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~l~~~~~~~-   95 (146)
                      +........++|.+.+.||+|+||.|    ..+..+|+|.+...   .......+..++..  +.|+||+++++++... 
T Consensus        28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~  104 (337)
T 3mdy_A           28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGT  104 (337)
T ss_dssp             CHHHHTTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred             CcccccccccceEEEeEeecCCCeEEEEEEECCceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence            33444555678999999999999998    46788999998532   33444555555554  4899999999998876 


Q ss_pred             ---CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150           96 ---EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        96 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                         ..++++|||+++|+|.+++..    ..+++..+..++.|++.||.|.+
T Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH  151 (337)
T 3mdy_A          105 GSWTQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLH  151 (337)
T ss_dssp             GGGCEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH
Confidence               678999999999999999964    24889999999999999998743

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.54  E-value=1.9e-14  Score=98.85  Aligned_cols=108  Identities=19%  Similarity=0.093  Sum_probs=85.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhh-CCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAK-LQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~-l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|...+.||+|+||.|      ..+..+|+|.+.....  ........++..+.. ..|+|++++++++...+.+++++
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            57999999999999998      3578899999864322  223344555555544 49999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+ +++|.+++...  ...+++..+..++.|++.||.|.
T Consensus       137 e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~L  173 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHL  173 (311)
T ss_dssp             ECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            999 56898888653  34589999999999999999873

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.54  E-value=3.9e-14  Score=98.56  Aligned_cols=111  Identities=15%  Similarity=0.213  Sum_probs=85.6

Q ss_pred             HHccCcccceeecccCceee------cCCcEEEEEEeccCCcc-----cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           29 DATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ-----GAQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      ....+|...+.||+|+||.|      ..|..+|+|.+......     ....+.+|+.++..++|+||+++++++...+.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            34578999999999999998      34778999998643211     12467799999999999999999999998899


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .++++||+++ +|.+.+...  ...+++..+..++.|++.||.|.
T Consensus        87 ~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l  128 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYL  128 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999996 888888652  34578888999999999999873

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.54  E-value=1.9e-15  Score=104.75  Aligned_cols=110  Identities=16%  Similarity=0.188  Sum_probs=85.8

Q ss_pred             HccCcccceeecccCceee----cCCcEEEEEEeccCCc--------ccHHHHHHHHHHHhhCC---------CCCeeeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSS--------QGAQEINNEVVVVAKLQ---------HINLVRL   88 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~--------~~~~~~~~e~~~l~~l~---------h~~i~~l   88 (146)
                      ..++|.+.+.||+|+||.|    ..|..+|+|.+.....        .....+.+|+.++..++         |+|++++
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           18 PTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             CHHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             ccccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            3467889999999999998    4678899999975421        22477888998888775         7777777


Q ss_pred             eeEEE------------------------------cCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHH
Q 048150           89 LGFCL------------------------------EREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRD  138 (146)
Q Consensus        89 ~~~~~------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~  138 (146)
                      .+.+.                              ..+.+++||||+++|++.+.+.+    ..+++..+..++.|++.|
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a  173 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS  173 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence            66543                              15779999999999977666633    347899999999999999


Q ss_pred             Hhhhc
Q 048150          139 CSRNF  143 (146)
Q Consensus       139 l~~~~  143 (146)
                      |.|.+
T Consensus       174 L~~lH  178 (336)
T 2vuw_A          174 LAVAE  178 (336)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            97644

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.54  E-value=6.4e-14  Score=104.63  Aligned_cols=101  Identities=23%  Similarity=0.344  Sum_probs=84.4

Q ss_pred             eeecccCceeecC--------CcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVLPN--------EHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v~~--------~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|+.        +..+|+|.+....  ......+.+|+.++..++|+||+++++++. .+..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence            4799999999943        3579999986432  223578999999999999999999999886 4568899999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+|.+++..   ...+++..+..++.|++.||.|.
T Consensus       454 g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yL  485 (635)
T 4fl3_A          454 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYL  485 (635)
T ss_dssp             EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999964   34588999999999999999873

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.54  E-value=6.1e-14  Score=97.48  Aligned_cols=109  Identities=19%  Similarity=0.237  Sum_probs=91.3

Q ss_pred             HccCcccceeecccCceee-----cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCC--CCeeeEeeEEEcCCceeE
Q 048150           30 ATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQH--INLVRLLGFCLEREEKIL  100 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h--~~i~~l~~~~~~~~~~~l  100 (146)
                      ..+.|.+.+.||+|+||.|     ..+..+|+|.+.....  .....+.+|+.++..+.|  ++|+++++++...+.+++
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence            3467999999999999998     3567899999865432  234678899999999976  999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|| +.+|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        87 v~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~l  124 (343)
T 3dbq_A           87 VME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTI  124 (343)
T ss_dssp             EEC-CCSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEe-CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999 567899999965   33588899999999999999874

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.54  E-value=3.9e-14  Score=106.13  Aligned_cols=114  Identities=16%  Similarity=0.211  Sum_probs=92.1

Q ss_pred             HHHHHccCcccceeecccCceeecC---------CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVLPN---------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLER   95 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v~~---------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~   95 (146)
                      .+....++|.+.+.||+|+||.|+.         +..+|+|.+.... ......+..|+.++..++||||+++++++ ..
T Consensus       384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~  462 (656)
T 2j0j_A          384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TE  462 (656)
T ss_dssp             GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CS
T ss_pred             ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-ec
Confidence            3444557789999999999999832         3458899876432 22346788999999999999999999987 45


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +..+++|||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus       463 ~~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~L  507 (656)
T 2j0j_A          463 NPVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYL  507 (656)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999752  33588999999999999999874

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.54  E-value=4.7e-14  Score=96.26  Aligned_cols=110  Identities=19%  Similarity=0.323  Sum_probs=87.4

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCC----cccHHHHHHHHHHHhhCCCCCeeeEeeEEE--cCCce
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS----SQGAQEINNEVVVVAKLQHINLVRLLGFCL--EREEK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~--~~~~~   98 (146)
                      .++|.+.+.||+|+||.|      ..+..+++|.+....    ......+.+|+.++..++|+|++++++++.  ..+..
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            468999999999999998      356789999986431    223567889999999999999999999984  34578


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||++++ +.+++... ....+++..+..++.|++.||.|.
T Consensus        84 ~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~L  125 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYL  125 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHH
Confidence            9999999986 66766542 234588999999999999999873

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.54  E-value=6.7e-14  Score=95.52  Aligned_cols=105  Identities=17%  Similarity=0.213  Sum_probs=85.8

Q ss_pred             cCcccc-eeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHH-hhCCCCCeeeEeeEEEc----CCcee
Q 048150           32 NKFSTD-NKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVV-AKLQHINLVRLLGFCLE----REEKI   99 (146)
Q Consensus        32 ~~~~~~-~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~l~~~~~~----~~~~~   99 (146)
                      .+|... +.||+|+||.|      ..+..+|+|.+..     ......|+.++ ....|+|++++++++..    ...++
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            556665 78999999998      4577899999853     34566788777 55699999999999876    56789


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|||+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus        92 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~l  133 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYL  133 (299)
T ss_dssp             EEECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999753 233589999999999999999863

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.54  E-value=9.6e-15  Score=100.81  Aligned_cols=108  Identities=20%  Similarity=0.295  Sum_probs=87.4

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCccc-HHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++|...+.||+|+||.|      ..+..+|+|.+....... ...+.+|+.++..++|+|++++++++...+..+++|||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            57889999999999998      357789999986432211 12345789999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++ +|.+++...  ...+++..+..++.|++.||.|.
T Consensus        82 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~L  116 (324)
T 3mtl_A           82 LDK-DLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYC  116 (324)
T ss_dssp             CSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            985 898888653  33488899999999999999874

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.54  E-value=2.6e-14  Score=107.40  Aligned_cols=110  Identities=19%  Similarity=0.141  Sum_probs=92.1

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCcee
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~   99 (146)
                      ..++|.+.+.||+|+||.|      ..+..+|+|.+...   .......+..|..++..+ .|++|+.+++++...+.++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            4578999999999999998      35678999998642   122356678888888887 7999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||||+++|+|.+++...   ..+++..+..++.||+.||.|.
T Consensus       419 lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~L  458 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFL  458 (674)
T ss_dssp             EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999752   3589999999999999999873

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.53  E-value=4.1e-14  Score=99.73  Aligned_cols=111  Identities=22%  Similarity=0.343  Sum_probs=84.3

Q ss_pred             HHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC-----
Q 048150           27 IEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER-----   95 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~-----   95 (146)
                      +.....+|...+.||+|+||.|      ..|..+|+|.+.....    ...+|+.++..++|+||+++++++...     
T Consensus         2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~   77 (383)
T 3eb0_A            2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP   77 (383)
T ss_dssp             ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred             CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence            3456688999999999999998      4678899999864321    123799999999999999999988543     


Q ss_pred             ---------------------------------CceeEEEEecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhh
Q 048150           96 ---------------------------------EEKILVYEYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        96 ---------------------------------~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                                                       ..++++|||+++ +|.+.+... .....+++..+..++.|++.||.|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~  156 (383)
T 3eb0_A           78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF  156 (383)
T ss_dssp             --------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                                             338899999995 877776531 123458999999999999999986


Q ss_pred             h
Q 048150          142 N  142 (146)
Q Consensus       142 ~  142 (146)
                      .
T Consensus       157 L  157 (383)
T 3eb0_A          157 I  157 (383)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.53  E-value=4.9e-14  Score=95.24  Aligned_cols=110  Identities=20%  Similarity=0.276  Sum_probs=90.0

Q ss_pred             HccCcccceeecccCceeecCC---------cEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           30 ATNKFSTDNKLGEGGFGVLPNE---------HEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~~~---------~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ..++|...+.||+|+||.|+.+         ..+++|.+... .......+.+|+.++..++|||++++++++. .+..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-SSSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCCE
Confidence            4578999999999999998322         24899998654 2234567889999999999999999999875 45678


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++++|.+++...  ...+++..+..++.|++.||.|.
T Consensus        89 ~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~l  129 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYL  129 (281)
T ss_dssp             EEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999652  33488999999999999999874

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.53  E-value=3.5e-14  Score=106.76  Aligned_cols=108  Identities=17%  Similarity=0.232  Sum_probs=88.1

Q ss_pred             HccCcccceeecccCceeec-------CCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc----
Q 048150           30 ATNKFSTDNKLGEGGFGVLP-------NEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE----   97 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~-------~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~----   97 (146)
                      ...+|.+.+.||+|+||.|+       .+..|++|.+.... ......+..|+.++..++||||+++++++...+.    
T Consensus        78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred             eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence            34789999999999999981       46789999986432 2335568899999999999999999999987665    


Q ss_pred             -eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 -KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       .++||||+++++|.+++..     .+++..+..++.|++.||.|.
T Consensus       158 ~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~l  198 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYL  198 (681)
T ss_dssp             EEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHH
Confidence             7999999999999887643     589999999999999999874

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.52  E-value=4e-14  Score=95.95  Aligned_cols=112  Identities=17%  Similarity=0.215  Sum_probs=86.3

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcc-cHH-HHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ-GAQ-EINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~-~~~-~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ..++|...+.||+|+||.|      ..+..+|+|.+...... ... .+..+...+..+.|||++++++++...+..+++
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            4578999999999999998      36778999998654221 222 334444557778999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||+++ +|.+++... .....+++..+..++.|++.||.|.
T Consensus        85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~l  125 (290)
T 3fme_A           85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL  125 (290)
T ss_dssp             EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999985 887776531 1244589999999999999999763

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.52  E-value=1.1e-13  Score=97.88  Aligned_cols=107  Identities=20%  Similarity=0.235  Sum_probs=89.6

Q ss_pred             cCcccceeecccCceee-----cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCC--CCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQ--HINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~--h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      .+|.+.+.||+|+||.|     ..+..+|+|.+....  ......+.+|+.++..+.  |+||+++++++...+.++++|
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            45999999999999998     347789999986543  223567889999999986  599999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      | +.+++|.+++...   ..+++..+..++.|++.||.|.
T Consensus       136 E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~l  171 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTI  171 (390)
T ss_dssp             E-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHH
T ss_pred             e-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH
Confidence            9 6778999999752   3578888999999999999763

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.51  E-value=1.5e-13  Score=95.70  Aligned_cols=109  Identities=18%  Similarity=0.297  Sum_probs=88.8

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEc--------
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLE--------   94 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~--------   94 (146)
                      ..+|...+.||+|+||.|      ..|..+|+|.+.....  .....+.+|+.++..++|+|++++++++..        
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            467999999999999988      4577899999864422  235677899999999999999999999876        


Q ss_pred             CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           95 REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        95 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+.+++||||+++ +|.+.+...  ...+++..+..++.|++.||.|.
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~L  140 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYI  140 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            3458999999986 777777542  34589999999999999999873

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.51  E-value=1.1e-13  Score=94.00  Aligned_cols=108  Identities=19%  Similarity=0.247  Sum_probs=91.0

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ..++|...+.||+|+||.|      ..+..+|+|.+....  ....+.+|+.++..+ +|++++.+++++......++++
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   85 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   85 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence            3567999999999999998      457789999986432  334577889999998 7999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+ +++|.+++...  ...+++..+..++.|++.||.|.
T Consensus        86 e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~l  122 (298)
T 1csn_A           86 DLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSI  122 (298)
T ss_dssp             ECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             Eec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            999 89999999752  33489999999999999999863

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.51  E-value=8.1e-14  Score=100.66  Aligned_cols=106  Identities=20%  Similarity=0.303  Sum_probs=86.8

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC------
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLERE------   96 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~------   96 (146)
                      ..+|...+.||+|+||.|      ..+..+|+|.+...  .......+.+|+.++..++|+||+++++++....      
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            477999999999999998      45778999998643  2223567889999999999999999999986543      


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+++||||+++ ++.+.+..     .+++..+..++.|++.||.|.
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~l  180 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHL  180 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHH
Confidence            46999999987 46666642     378899999999999999873

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.51  E-value=4.3e-14  Score=95.79  Aligned_cols=109  Identities=26%  Similarity=0.321  Sum_probs=82.8

Q ss_pred             ccCcccceeecccCceeecCC-------c--EEEEEEeccCC---cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           31 TNKFSTDNKLGEGGFGVLPNE-------H--EIAVKRLSRSS---SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~~-------~--~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      .++|...+.||+|+||.|+.+       .  .+++|.+....   ......+.+|+.++..++|+|++++++++...+ .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            467999999999999988322       2  58999886432   233567889999999999999999999887654 8


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++++|.+++...  ...+++..+..++.|++.||.|.
T Consensus        96 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~l  137 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYL  137 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHH
T ss_pred             eeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999753  23488999999999999999873

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.51  E-value=2.6e-13  Score=92.85  Aligned_cols=111  Identities=22%  Similarity=0.332  Sum_probs=85.8

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC-----cccHHHHHHHHHHHhhC---CCCCeeeEeeEEEcC
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-----SQGAQEINNEVVVVAKL---QHINLVRLLGFCLER   95 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-----~~~~~~~~~e~~~l~~l---~h~~i~~l~~~~~~~   95 (146)
                      ..++|...+.||+|+||.|      ..+..+|+|.+....     ......+.+|+.++..+   .|+|++++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            4578999999999999998      456789999986322     11234566777777665   499999999999875


Q ss_pred             C-----ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 E-----EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .     .+++++|++. |+|.+++... ....+++..+..++.|++.||.|.
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~l  136 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKA-PPPGLPAETIKDLMRQFLRGLDFL  136 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTC-CTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHH
Confidence            5     4799999998 4999998763 233489999999999999999874

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.51  E-value=8.5e-14  Score=97.75  Aligned_cols=108  Identities=17%  Similarity=0.249  Sum_probs=83.5

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC-----
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLERE-----   96 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~-----   96 (146)
                      ...+|...+.||+|+||.|      ..|..+|+|.+....  ......+.+|+.++..++|+||+++++++...+     
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            3578999999999999998      457889999985432  223567889999999999999999999987653     


Q ss_pred             -ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 -EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       .+++++||+ +++|.+++..    ..+++..+..++.|++.||.|.
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~L  144 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYI  144 (367)
T ss_dssp             CCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH
Confidence             359999999 7799999864    3478899999999999999873

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.50  E-value=5.1e-14  Score=97.18  Aligned_cols=109  Identities=21%  Similarity=0.326  Sum_probs=87.1

Q ss_pred             ccCcccceeecccCceeec------CCc----EEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           31 TNKFSTDNKLGEGGFGVLP------NEH----EIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~------~~~----~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      .++|...+.||+|+||.|+      .+.    .+++|.+.... ......+..|+.++..++|+||+++++++. .+..+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~   90 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ   90 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence            4678999999999999993      233    37788775332 223455678899999999999999999875 56789


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus        91 ~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~l  131 (325)
T 3kex_A           91 LVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYL  131 (325)
T ss_dssp             EEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999753  33588889999999999999873

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.50  E-value=1.9e-13  Score=96.49  Aligned_cols=108  Identities=21%  Similarity=0.350  Sum_probs=81.9

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCC-CCCeeeEeeEEEcCC--ce
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQ-HINLVRLLGFCLERE--EK   98 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~--~~   98 (146)
                      ..++|...+.||+|+||.|      ..|..+|+|.+...  .........+|+.++..+. |+||+++++++...+  .+
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            4578999999999999998      45778999998543  2233566789999999996 999999999997654  68


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++||||++ |+|.+++..    ..+++..+..++.|++.||.|.
T Consensus        87 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~L  125 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYL  125 (388)
T ss_dssp             EEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHH
Confidence            99999998 589998864    2478889999999999999863

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.49  E-value=2.8e-13  Score=93.62  Aligned_cols=109  Identities=23%  Similarity=0.358  Sum_probs=89.2

Q ss_pred             ccCcccceeecccCceeec------CCc----EEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           31 TNKFSTDNKLGEGGFGVLP------NEH----EIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~------~~~----~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ..+|...+.||+|+||.|+      .+.    .+++|.+... .......+.+|+.++..++||||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            4679999999999999993      233    3577777533 3335678899999999999999999999987654 78


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++++++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus        93 ~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~L  133 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYL  133 (327)
T ss_dssp             EEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999753  33488999999999999999874

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.49  E-value=2.2e-13  Score=95.40  Aligned_cols=108  Identities=15%  Similarity=0.235  Sum_probs=89.4

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC-----Cc
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLER-----EE   97 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~-----~~   97 (146)
                      ...+|...+.||+|+||.|      ..+..+|+|.+..... .....+.+|+.++..++|+||+++++++...     ..
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence            3468999999999999998      3567899999864332 2346788999999999999999999998654     35


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .++++|++.+ +|.+++..    ..+++..+..++.|++.||.|.
T Consensus       105 ~~iv~e~~~~-~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~L  144 (364)
T 3qyz_A          105 VYIVQDLMET-DLYKLLKT----QHLSNDHICYFLYQILRGLKYI  144 (364)
T ss_dssp             EEEEEECCSE-EHHHHHHH----CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcccCc-CHHHHHHh----CCCCHHHHHHHHHHHHHHHHHH
Confidence            8999999985 89998854    2488999999999999999873

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.48  E-value=4.1e-13  Score=94.28  Aligned_cols=107  Identities=20%  Similarity=0.283  Sum_probs=88.4

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC-----
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLERE-----   96 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~-----   96 (146)
                      ...+|...+.||+|+||.|      ..+..+|+|.+....  ......+.+|+.++..++||||+++++++...+     
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~  102 (371)
T 2xrw_A           23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  102 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred             hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence            3478999999999999998      356789999986532  223466889999999999999999999987654     


Q ss_pred             -ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 -EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       ..+++|||+++ +|.+.+..     .+++..+..++.|++.||.|.
T Consensus       103 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~l  143 (371)
T 2xrw_A          103 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHL  143 (371)
T ss_dssp             CEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHH
Confidence             67999999985 78888753     378899999999999999873

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.47  E-value=8e-14  Score=95.60  Aligned_cols=118  Identities=19%  Similarity=0.243  Sum_probs=94.9

Q ss_pred             ccChhHHHHHccCcccceeecccCceee-----cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCC--CCCeeeEeeE
Q 048150           21 QFDFETIEDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQ--HINLVRLLGF   91 (146)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~--h~~i~~l~~~   91 (146)
                      .+.++.+....++|...+.||+|+||.|     ..+..+|+|.+....  ......+.+|+.++..+.  |+++++++++
T Consensus        17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~   96 (313)
T 3cek_A           17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY   96 (313)
T ss_dssp             ---CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred             CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence            3444555556678999999999999998     357789999986442  223567889999999986  5999999999


Q ss_pred             EEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           92 CLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        92 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +...+..+++|| +.+++|.+++..   ...+++..+..++.|++.||.|.
T Consensus        97 ~~~~~~~~lv~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~L  143 (313)
T 3cek_A           97 EITDQYIYMVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTI  143 (313)
T ss_dssp             EECSSEEEEEEC-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             eecCCEEEEEEe-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999 667899999965   23578889999999999999863

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.47  E-value=3e-13  Score=94.08  Aligned_cols=108  Identities=18%  Similarity=0.263  Sum_probs=89.3

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC-----Cc
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLER-----EE   97 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~-----~~   97 (146)
                      ..++|.+.+.||+|+||.|      ..|..+|+|.+.... ......+.+|+.++..++|+|++++++++...     ..
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            4578999999999999998      347789999986432 22355678999999999999999999987654     56


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .++++||+. |+|.+++..    ..+++..+..++.|++.||.|.
T Consensus        89 ~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~L  128 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVL  128 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHH
Confidence            899999998 589998864    2488999999999999999873

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.47  E-value=6e-13  Score=92.32  Aligned_cols=108  Identities=15%  Similarity=0.113  Sum_probs=83.0

Q ss_pred             HccCcccce-eecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc----CCce
Q 048150           30 ATNKFSTDN-KLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLE----REEK   98 (146)
Q Consensus        30 ~~~~~~~~~-~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~----~~~~   98 (146)
                      ..++|.+.+ .||+|+||.|      ..+..+|+|.+...    ..........+..+.|+|++++++++..    ...+
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            446788854 6999999998      35789999998532    1222222334566799999999999875    3458


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|||+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus       102 ~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~L  144 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFL  144 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999763 234589999999999999999873

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.47  E-value=5e-13  Score=93.87  Aligned_cols=107  Identities=17%  Similarity=0.285  Sum_probs=88.7

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce---
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK---   98 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~---   98 (146)
                      ...+|...+.||+|+||.|      ..|..+|+|.+.....  .....+.+|+.++..++|+|++++++++...+..   
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  119 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  119 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence            3478999999999999998      3577899999865422  2256788999999999999999999999876654   


Q ss_pred             ---eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ---ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ---~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                         ++++||+. ++|.+.+..     .+++..+..++.|++.||.|.
T Consensus       120 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~L  160 (371)
T 4exu_A          120 YDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYI  160 (371)
T ss_dssp             CCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHH
Confidence               99999998 588887732     388999999999999999873

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.47  E-value=5.1e-14  Score=96.47  Aligned_cols=114  Identities=23%  Similarity=0.348  Sum_probs=82.6

Q ss_pred             HHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcc------cHHHHHHHHHHHhhC----CCCCeeeEe
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ------GAQEINNEVVVVAKL----QHINLVRLL   89 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~------~~~~~~~e~~~l~~l----~h~~i~~l~   89 (146)
                      +.....++|.+.+.||+|+||.|      ..+..+|+|.+......      ....+..|+.++..+    .|+|+++++
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~  104 (312)
T 2iwi_A           25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL  104 (312)
T ss_dssp             --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred             chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence            44556678999999999999998      35678999998654221      122345688888877    899999999


Q ss_pred             eEEEcCCceeEEEEe-cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           90 GFCLEREEKILVYEY-VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        90 ~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++...+..++++|+ +.+++|.+++..   ...+++..+..++.|++.||.|.
T Consensus       105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~l  155 (312)
T 2iwi_A          105 DWFETQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHC  155 (312)
T ss_dssp             EEC-----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999988999999999 789999999965   23488999999999999999873

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.47  E-value=1.6e-13  Score=95.50  Aligned_cols=108  Identities=17%  Similarity=0.189  Sum_probs=82.0

Q ss_pred             ccCcccceeecccCceeec---------CCcEEEEEEeccCCccc-----------HHHHHHHHHHHhhCCCCCeeeEee
Q 048150           31 TNKFSTDNKLGEGGFGVLP---------NEHEIAVKRLSRSSSQG-----------AQEINNEVVVVAKLQHINLVRLLG   90 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~---------~~~~~a~k~~~~~~~~~-----------~~~~~~e~~~l~~l~h~~i~~l~~   90 (146)
                      .++|.+.+.||+|+||.|+         .+..+++|.........           ...+..|+..+..+.|+|++++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            4679999999999999982         45679999986543211           123567788888999999999999


Q ss_pred             EEEc----CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           91 FCLE----REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        91 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++..    ....+++|||+ +++|.+++...   ..+++..+..++.|++.||.|.
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~L  167 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYI  167 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH
Confidence            9987    67799999999 99999999652   2689999999999999999873

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.47  E-value=1.3e-13  Score=96.59  Aligned_cols=110  Identities=13%  Similarity=0.140  Sum_probs=84.4

Q ss_pred             HccCcccceeecccCceeecC-----------CcEEEEEEeccCCccc-----------HHHHHHHHHHHhhCCCCCeee
Q 048150           30 ATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSSSQG-----------AQEINNEVVVVAKLQHINLVR   87 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~~~~-----------~~~~~~e~~~l~~l~h~~i~~   87 (146)
                      ...+|.+.+.||+|+||.|+.           +..+|+|.+.......           ......++..+..+.|+||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            445899999999999999932           4679999986543211           112344555677788999999


Q ss_pred             EeeEEEcC----CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           88 LLGFCLER----EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        88 l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++...    ...+++|||+ +++|.+++..  ....+++..+..++.|++.||.|.
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~l  168 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYI  168 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHH
Confidence            99998764    4489999999 9999999965  234589999999999999999874

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.46  E-value=2.2e-13  Score=97.56  Aligned_cols=106  Identities=16%  Similarity=0.228  Sum_probs=85.6

Q ss_pred             ccCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ..+|...+.||+|+||.|     ..+..||+|.+.....   ....+|+.++..+ .||||+++++.+......+++|||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            356888999999999985     5788999999864332   2245789999998 899999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +. |+|.+++....  ...+...+..++.|++.||.|.
T Consensus       100 ~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~L  134 (432)
T 3p23_A          100 CA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHL  134 (432)
T ss_dssp             CS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHH
T ss_pred             CC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHH
Confidence            97 59999997633  2244455778999999999873

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.46  E-value=2.1e-13  Score=95.76  Aligned_cols=108  Identities=19%  Similarity=0.250  Sum_probs=81.7

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC------
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLER------   95 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~------   95 (146)
                      ..++|...+.||+|+||.|      ..|..+|+|.+....  ......+.+|+.++..++|+||+++++++...      
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            3478999999999999998      456789999986432  22356788999999999999999999998654      


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +..++++|++ +++|.+++..    ..+++..+..++.|++.||.|.
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~L  148 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYI  148 (367)
T ss_dssp             CCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH
Confidence            5579999998 5789888753    3588999999999999999873

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.46  E-value=3.4e-13  Score=93.24  Aligned_cols=106  Identities=25%  Similarity=0.323  Sum_probs=82.1

Q ss_pred             HccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHH--HhhCCCCCeeeEeeEEEc-----CCce
Q 048150           30 ATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVV--VAKLQHINLVRLLGFCLE-----REEK   98 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~--l~~l~h~~i~~l~~~~~~-----~~~~   98 (146)
                      ..++|.+.+.||+|+||.|    ..+..+|+|.+...   ....+..+..+  +..+.|+|++++++.+..     ...+
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             ChHHhheeeecccCCCeEEEEEEECCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            4578999999999999999    45778999998632   33444444444  445799999999875542     2247


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|||+++|+|.+++...    ..++..+..++.|++.||.|.
T Consensus        88 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~L  127 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYL  127 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHH
Confidence            8999999999999999642    247888999999999999863

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.45  E-value=6.9e-13  Score=92.43  Aligned_cols=106  Identities=17%  Similarity=0.285  Sum_probs=87.4

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc-----
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREE-----   97 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~-----   97 (146)
                      ..+|...+.||+|+||.|      ..|..+|+|.+.....  .....+.+|+.++..++|+|++++++++...+.     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            468999999999999998      3577899999865322  224678899999999999999999999876654     


Q ss_pred             -eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 -KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       .+++|||+. ++|.+++..     .+++..+..++.|++.||.|.
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~L  142 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYI  142 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHH
Confidence             499999998 588877632     388999999999999999874

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.45  E-value=3.8e-13  Score=92.78  Aligned_cols=111  Identities=17%  Similarity=0.237  Sum_probs=89.4

Q ss_pred             HHccCcccceeecccCceeec-------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCC------CeeeEeeEEEcC
Q 048150           29 DATNKFSTDNKLGEGGFGVLP-------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHI------NLVRLLGFCLER   95 (146)
Q Consensus        29 ~~~~~~~~~~~lg~g~fg~v~-------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~l~~~~~~~   95 (146)
                      ...++|.+.+.||+|+||.|+       .+..+|+|.+... ......+.+|+.++..+.|+      +++++++++...
T Consensus        11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~   89 (339)
T 1z57_A           11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   89 (339)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence            345789999999999999982       4568999998632 23356677888888877554      589999999999


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +..+++|||+ +++|.+++... ....+++..+..++.|++.||.|.
T Consensus        90 ~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~l  134 (339)
T 1z57_A           90 GHICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFL  134 (339)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHH
Confidence            9999999999 78999998753 233588999999999999999874

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.45  E-value=9e-13  Score=94.31  Aligned_cols=110  Identities=14%  Similarity=0.218  Sum_probs=88.1

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC------CCCCeeeEeeEEEcCCc
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL------QHINLVRLLGFCLEREE   97 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~l~~~~~~~~~   97 (146)
                      ...+|.+.+.||+|+||.|      ..+..+|+|.+... ......+..|+.++..+      .|+|++.+++.+...+.
T Consensus        95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  173 (429)
T 3kvw_A           95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH  173 (429)
T ss_dssp             ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred             ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence            3456999999999999999      34678999998643 22345566777777765      56799999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++||+. ++|.+++... ....+++..+..++.|++.||.|.
T Consensus       174 ~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~L  216 (429)
T 3kvw_A          174 ICMTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDAL  216 (429)
T ss_dssp             EEEEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999997 5899988753 233489999999999999999873

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.44  E-value=1.1e-12  Score=90.45  Aligned_cols=113  Identities=14%  Similarity=0.205  Sum_probs=87.9

Q ss_pred             HHHccCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHH-HHhhCCCCCeeeEeeEEEcCCcee
Q 048150           28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVV-VVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~-~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ....++|...+.||+|+||.|      ..+..+|+|.+..... .....+..|+. ++..+.|+||+++++++...+..+
T Consensus        18 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~   97 (327)
T 3aln_A           18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCW   97 (327)
T ss_dssp             CCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEE
T ss_pred             ccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceE
Confidence            345588999999999999998      3577899999975422 22344555655 677789999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCC--CCCCCCChHHHHHHHHHHHHHHhh
Q 048150          100 LVYEYVPNKRLDNFLYEP--EKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++||+++ +|.+++...  .....+++..+..++.|++.||.|
T Consensus        98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~  140 (327)
T 3aln_A           98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH  140 (327)
T ss_dssp             EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHH
Confidence            99999986 787777521  123458899999999999999976

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.44  E-value=4e-13  Score=94.62  Aligned_cols=111  Identities=15%  Similarity=0.168  Sum_probs=86.8

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC--------CCCeeeEeeEEE--
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ--------HINLVRLLGFCL--   93 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~--------h~~i~~l~~~~~--   93 (146)
                      ...+|.+.+.||+|+||.|      ..+..+|+|.+... ......+.+|+.++..+.        |++++++++.+.  
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~  113 (397)
T 1wak_A           35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS  113 (397)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred             cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence            4578999999999999998      34678999998633 234567888999988875        778999999887  


Q ss_pred             --cCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150           94 --EREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        94 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                        ....++++|||+. +++.+.+... ....+++..+..++.|++.||.|.+
T Consensus       114 ~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH  163 (397)
T 1wak_A          114 GVNGTHICMVFEVLG-HHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLH  163 (397)
T ss_dssp             ETTEEEEEEEECCCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCceEEEEEeccC-ccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHH
Confidence              4557999999995 4666655432 2345899999999999999997643

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.44  E-value=5e-14  Score=99.10  Aligned_cols=111  Identities=10%  Similarity=0.103  Sum_probs=82.9

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHH---HHhhCCCCCeeeEe-------eE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVV---VVAKLQHINLVRLL-------GF   91 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~---~l~~l~h~~i~~l~-------~~   91 (146)
                      .++|...+.||+|+||.|      ..|..+|+|.+...   .......+.+|+.   .+..+.||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            467888999999999998      34779999999743   2334577889994   55556899999887       55


Q ss_pred             EEcCC-----------------ceeEEEEecCCCCHHHhhcCCCC----CCCCChHHHHHHHHHHHHHHhhh
Q 048150           92 CLERE-----------------EKILVYEYVPNKRLDNFLYEPEK----QGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        92 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +...+                 ..+++|||+ +|+|.+++.....    ...+++..+..++.|++.||.|.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  222 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL  222 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            55443                 378999999 5799999974211    11233578888999999999873

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.43  E-value=5.1e-13  Score=91.91  Aligned_cols=111  Identities=23%  Similarity=0.299  Sum_probs=85.5

Q ss_pred             HccCcccceeecccCceeec-------CCcEEEEEEeccCC--cccHHHHHHHHHHHhhC---CCCCeeeEeeEEE----
Q 048150           30 ATNKFSTDNKLGEGGFGVLP-------NEHEIAVKRLSRSS--SQGAQEINNEVVVVAKL---QHINLVRLLGFCL----   93 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~-------~~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l---~h~~i~~l~~~~~----   93 (146)
                      ...+|.+.+.||+|+||.|+       .+..+|+|.+....  ......+.+|+.++..+   .|||++++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            45789999999999999982       35679999986421  11233455676666655   8999999999987    


Q ss_pred             -cCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           94 -EREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        94 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       .....++++||++ |+|.+++... ....+++..+..++.|++.||.|.
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~l  136 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFL  136 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHH
Confidence             4566899999998 5999998653 233488999999999999999874

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.43  E-value=5.1e-13  Score=95.72  Aligned_cols=107  Identities=14%  Similarity=0.122  Sum_probs=81.8

Q ss_pred             cCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEec
Q 048150           32 NKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      +.|...+.||+|+||.|     ..|..+|+|.+...   ....+.+|+.++..+ +||||+++++.+...+.+++++||+
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~   91 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC   91 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence            34556788999999987     56789999998532   345678899999876 8999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCC----CChHHHHHHHHHHHHHHhhh
Q 048150          106 PNKRLDNFLYEPEKQGQ----WDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~----~~~~~~~~i~~~i~~~l~~~  142 (146)
                      . |+|.+++........    .++..+..++.|++.||.|.
T Consensus        92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  131 (434)
T 2rio_A           92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL  131 (434)
T ss_dssp             S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHH
T ss_pred             C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHH
Confidence            6 599999975322110    13334678999999999763

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.41  E-value=8.9e-13  Score=92.90  Aligned_cols=117  Identities=17%  Similarity=0.184  Sum_probs=91.6

Q ss_pred             hhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC-CC-----CeeeEeeE
Q 048150           24 FETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ-HI-----NLVRLLGF   91 (146)
Q Consensus        24 ~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~-h~-----~i~~l~~~   91 (146)
                      ........++|.+.+.||+|+||.|      ..+..+|+|.+... ......+..|+.++..+. |+     +++.+.+.
T Consensus        46 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  124 (382)
T 2vx3_A           46 VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRH  124 (382)
T ss_dssp             CCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEE
T ss_pred             eecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeee
Confidence            3444445678999999999999998      35678999998632 223456677888877764 44     48999999


Q ss_pred             EEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150           92 CLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        92 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      +...+..++||||+++ +|.+++.... ...+++..+..++.|++.||.|.+
T Consensus       125 ~~~~~~~~lv~e~~~~-~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH  174 (382)
T 2vx3_A          125 FMFRNHLCLVFEMLSY-NLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLA  174 (382)
T ss_dssp             EEETTEEEEEEECCCC-BHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             eccCCceEEEEecCCC-CHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999975 9999987532 234889999999999999998754

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.41  E-value=1.9e-13  Score=95.24  Aligned_cols=105  Identities=11%  Similarity=0.086  Sum_probs=84.4

Q ss_pred             ccCcccceeecccCceeec--------------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeee---------
Q 048150           31 TNKFSTDNKLGEGGFGVLP--------------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR---------   87 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~--------------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~---------   87 (146)
                      .++|.+.+.||+|+||.|+              .+..+|+|.+...     ..+.+|+.++..+.|+|+++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            4689999999999999981              3678999998643     35778999999999988876         


Q ss_pred             ------EeeEEEc-CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           88 ------LLGFCLE-REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        88 ------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                            +++++.. .+..+++|||+ +++|.+++... ....+++..+..++.|++.||.|.
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~L  175 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFL  175 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHH
Confidence                  5666665 67789999999 99999999752 234589999999999999999873

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.41  E-value=2.7e-12  Score=87.09  Aligned_cols=108  Identities=14%  Similarity=0.189  Sum_probs=85.9

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeE-EEcCCceeEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGF-CLEREEKILVY  102 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~-~~~~~~~~lv~  102 (146)
                      ..++|...+.||+|+||.|      ..+..+|+|.+....  ....+..|+.++..+.|++++..+.. ....+..++++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            3578999999999999998      456789999986432  23457899999999988776554444 45667789999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+ +++|.+++...  ...+++..+..++.|++.||.|.
T Consensus        85 e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~l  121 (296)
T 3uzp_A           85 ELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYI  121 (296)
T ss_dssp             ECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             Eec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            999 88999999642  33589999999999999999874

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.40  E-value=1.8e-12  Score=88.82  Aligned_cols=110  Identities=17%  Similarity=0.183  Sum_probs=78.4

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcc-cH-HHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ-GA-QEINNEVVVVAKLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~-~~-~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ..++|...+.||+|+||.|      ..+..+|+|.+...... .. ..+..+..++..+.|+||+++++++...+..+++
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv  102 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA  102 (318)
T ss_dssp             CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence            3467889999999999988      35789999999754322 22 2334444567788999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+ ++.+..+...  ....+++..+..++.|++.||.|.
T Consensus       103 ~e~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~l  140 (318)
T 2dyl_A          103 MELM-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYL  140 (318)
T ss_dssp             ECCC-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             Eecc-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHH
Confidence            9999 4455555432  234588999999999999999763

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.39  E-value=1.5e-12  Score=88.35  Aligned_cols=108  Identities=14%  Similarity=0.175  Sum_probs=81.7

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEee-EEEcCCceeEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLG-FCLEREEKILVY  102 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~-~~~~~~~~~lv~  102 (146)
                      ..++|...+.||+|+||.|      ..+..+|+|.+....  ....+..|+.++..+.|++++..+. ++...+..++++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            4578999999999999998      456789999865332  2234778999999998777665544 445677789999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+ +++|.+++...  ...+++..+..++.|++.||.|.
T Consensus        85 e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~L  121 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYI  121 (296)
T ss_dssp             ECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             Ecc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999 88999998642  33489999999999999999874

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.39  E-value=1.1e-12  Score=92.87  Aligned_cols=109  Identities=20%  Similarity=0.226  Sum_probs=81.0

Q ss_pred             HccCcccceeecccCceeec-----CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc------e
Q 048150           30 ATNKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE------K   98 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~------~   98 (146)
                      ...+|...+.||+|+||.|+     .+..+++|.+.....    ...+|+.++..++|+||+++++++...+.      +
T Consensus        38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~  113 (394)
T 4e7w_A           38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL  113 (394)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred             ccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence            34569999999999999993     344588888753321    12368999999999999999999865433      7


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|||++++.+............+++..+..++.|++.||.|.
T Consensus       114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L  157 (394)
T 4e7w_A          114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI  157 (394)
T ss_dssp             EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            89999999754433322112244588999999999999999874

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.38  E-value=1.3e-12  Score=93.31  Aligned_cols=106  Identities=22%  Similarity=0.264  Sum_probs=81.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC------Ccee
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER------EEKI   99 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~------~~~~   99 (146)
                      .+|...+.||+|+||.|      ..+..+|+|.+.....    ...+|+.++..++|+||+++++++...      ..++
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            45899999999999998      3578899999864321    123689999999999999999888542      2367


Q ss_pred             EEEEecCCCCHHHhhcCC-CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEP-EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+++ ++.+.+... .....+++..+..++.|++.||.|.
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L  172 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI  172 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999986 666655421 1234588999999999999999864

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.38  E-value=4.4e-13  Score=92.36  Aligned_cols=117  Identities=19%  Similarity=0.296  Sum_probs=91.2

Q ss_pred             ChhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcc------cHHHHHHHHHHHhhCC--CCCeeeE
Q 048150           23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ------GAQEINNEVVVVAKLQ--HINLVRL   88 (146)
Q Consensus        23 ~~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~------~~~~~~~e~~~l~~l~--h~~i~~l   88 (146)
                      +..+.....++|.+.+.||+|+||.|      ..+..+|+|.+......      ....+..|+.++..+.  |++++++
T Consensus        34 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~  113 (320)
T 3a99_A           34 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL  113 (320)
T ss_dssp             ------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCE
T ss_pred             cccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEE
Confidence            33455666788999999999999998      35678999998643211      1234567888898885  5999999


Q ss_pred             eeEEEcCCceeEEEEecCC-CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           89 LGFCLEREEKILVYEYVPN-KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        89 ~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++...+..++++|++.+ ++|.+++..   ...+++..+..++.|++.||.|.
T Consensus       114 ~~~~~~~~~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~L  165 (320)
T 3a99_A          114 LDWFERPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHC  165 (320)
T ss_dssp             EEEEECSSEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCcEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999976 899999864   23588999999999999999863

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.37  E-value=1.2e-12  Score=91.59  Aligned_cols=110  Identities=14%  Similarity=0.177  Sum_probs=88.2

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC-----------CCCeeeEeeEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ-----------HINLVRLLGFC   92 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~i~~l~~~~   92 (146)
                      ...+|.+.+.||+|+||.|      ..+..+|+|.+... ......+..|+.++..+.           |+|++++++.+
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~   95 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   95 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence            3468999999999999998      35678999998632 223556778888888775           78999999998


Q ss_pred             EcCC----ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           93 LERE----EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        93 ~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ...+    .+++++|++ +++|.+++... ....+++..+..++.|++.||.|.
T Consensus        96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~l  147 (373)
T 1q8y_A           96 NHKGPNGVHVVMVFEVL-GENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYM  147 (373)
T ss_dssp             EEEETTEEEEEEEECCC-CEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             hccCCCCceEEEEEecC-CCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHH
Confidence            7643    689999999 88999998753 233488999999999999999764

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.37  E-value=7.1e-12  Score=90.97  Aligned_cols=107  Identities=18%  Similarity=0.229  Sum_probs=85.8

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCC-CCeeeEeeEEEcCCceeEEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQH-INLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      .++|.+.+.||+|+||.|      ..+..+|+|.+....  ....+..|+.++..+.| +++..+..++...+..+++||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            468999999999999998      347789999876432  22347789999999976 555666666677788999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+ +++|.+++...  ...+++..+..++.||+.||.|.
T Consensus        84 ~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yL  119 (483)
T 3sv0_A           84 LL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFV  119 (483)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99 88999999642  33589999999999999999873

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.36  E-value=3.3e-12  Score=88.63  Aligned_cols=110  Identities=15%  Similarity=0.185  Sum_probs=86.3

Q ss_pred             HccCcccceeecccCceeec------CC-cEEEEEEeccCCcccHHHHHHHHHHHhhCCCCC------eeeEeeEEEcCC
Q 048150           30 ATNKFSTDNKLGEGGFGVLP------NE-HEIAVKRLSRSSSQGAQEINNEVVVVAKLQHIN------LVRLLGFCLERE   96 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v~------~~-~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~l~~~~~~~~   96 (146)
                      ..++|.+.+.||+|+||.|+      .+ ..+|+|.+... ......+..|+.++..+.|++      ++.+.+++...+
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~   95 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG   95 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence            45789999999999999982      33 57999998632 233566778888888876554      888899999899


Q ss_pred             ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..+++|||+ ++++.+.+... ....+++..+..++.|++.||.|.
T Consensus        96 ~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~l  139 (355)
T 2eu9_A           96 HMCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFL  139 (355)
T ss_dssp             EEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999 55676766542 223588999999999999999763

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.36  E-value=1.3e-12  Score=92.77  Aligned_cols=106  Identities=17%  Similarity=0.234  Sum_probs=77.2

Q ss_pred             ccc-ceeecccCceeec--------CCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc--CCceeEEE
Q 048150           34 FST-DNKLGEGGFGVLP--------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLE--REEKILVY  102 (146)
Q Consensus        34 ~~~-~~~lg~g~fg~v~--------~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~--~~~~~lv~  102 (146)
                      |.. .+.||+|+||.|+        .+..+|+|.+...  .....+.+|+.++..++|+||+++++++..  ...+++++
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence            554 4579999999982        3567999998643  234567899999999999999999999954  56799999


Q ss_pred             EecCCCCHHHhhcCC------CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEP------EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+.+ +|.+++...      .....+++..+..++.|++.||.|.
T Consensus       100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L  144 (405)
T 3rgf_A          100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL  144 (405)
T ss_dssp             ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence            99985 788777521      1223488999999999999999873

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.31  E-value=1e-11  Score=91.29  Aligned_cols=97  Identities=11%  Similarity=0.195  Sum_probs=69.8

Q ss_pred             ccceeecccCceeec----CCcEEEEEEeccCCccc--------HHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           35 STDNKLGEGGFGVLP----NEHEIAVKRLSRSSSQG--------AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        35 ~~~~~lg~g~fg~v~----~~~~~a~k~~~~~~~~~--------~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ...+.||+|+||.|+    .+..+++|.........        .+.+.+|+.++..++|+|++.+..++...+..+++|
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            446789999999997    88889999875432111        344789999999999999996655666777889999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++++|.+++..           ...++.|++.||.|.
T Consensus       419 E~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~L  447 (540)
T 3en9_A          419 SYINGKLAKDVIED-----------NLDIAYKIGEIVGKL  447 (540)
T ss_dssp             ECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHH
T ss_pred             ECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHH
Confidence            99999999999853           457888888888763

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.29  E-value=1.2e-11  Score=91.40  Aligned_cols=89  Identities=18%  Similarity=0.175  Sum_probs=72.1

Q ss_pred             cCCcEEEEEEeccCCc----------ccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCC
Q 048150           49 PNEHEIAVKRLSRSSS----------QGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEP  117 (146)
Q Consensus        49 ~~~~~~a~k~~~~~~~----------~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  117 (146)
                      +.|..+++|++.....          .....+.+|+.+|.++ .|+|++++++++.+.+.+||||||++|++|.+.|...
T Consensus       257 ~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~  336 (569)
T 4azs_A          257 FFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAG  336 (569)
T ss_dssp             EECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTT
T ss_pred             cccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhC
Confidence            5677899999864311          1235688999999999 7999999999999999999999999999999999752


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          118 EKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       118 ~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                         ..++..   .|+.||+.||.|.|
T Consensus       337 ---~~l~~~---~I~~QIl~AL~ylH  356 (569)
T 4azs_A          337 ---EEIDRE---KILGSLLRSLAALE  356 (569)
T ss_dssp             ---CCCCHH---HHHHHHHHHHHHHH
T ss_pred             ---CCCCHH---HHHHHHHHHHHHHH
Confidence               335553   57889999998743

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.28  E-value=7.8e-12  Score=87.73  Aligned_cols=110  Identities=11%  Similarity=0.070  Sum_probs=70.8

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhC--CCCCeeeEe-------eE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKL--QHINLVRLL-------GF   91 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l--~h~~i~~l~-------~~   91 (146)
                      ...+|...+.||+|+||.|      ..+..+|+|.+.....   .....+..|+.++..+  .|||+++++       +.
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~  139 (371)
T 3q60_A           60 GERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDA  139 (371)
T ss_dssp             CEEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEE
T ss_pred             CceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehh
Confidence            3455899999999999998      3567899999976432   1244566775444433  699987744       44


Q ss_pred             EEcC-----------------CceeEEEEecCCCCHHHhhcCCCCCCCCChHHH------HHHHHHHHHHHhhh
Q 048150           92 CLER-----------------EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRR------YKIIGGRGRDCSRN  142 (146)
Q Consensus        92 ~~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~------~~i~~~i~~~l~~~  142 (146)
                      +...                 ..+++||||++ |+|.+++.....  .+++...      ..++.|++.||.|.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~L  210 (371)
T 3q60_A          140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANL  210 (371)
T ss_dssp             EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence            4332                 23799999999 899999975322  2445555      67889999999763

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.17  E-value=9.6e-11  Score=79.55  Aligned_cols=104  Identities=14%  Similarity=0.108  Sum_probs=74.5

Q ss_pred             hHHHHHccCcccceeecccCceeec-----CCcEEEEEEeccCCc------------------ccHHHHHHHHHHHhhCC
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVLP-----NEHEIAVKRLSRSSS------------------QGAQEINNEVVVVAKLQ   81 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v~-----~~~~~a~k~~~~~~~------------------~~~~~~~~e~~~l~~l~   81 (146)
                      ..+......|...+.||+|+||.|+     .|..+|+|.+.....                  .....+.+|+.++..++
T Consensus        83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~  162 (282)
T 1zar_A           83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ  162 (282)
T ss_dssp             HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence            3445555667778999999999982     577899999864321                  12456789999999998


Q ss_pred             CCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           82 HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        82 h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                        | +++.+++. .+..+++|||+++|+|.+ +..         .....++.|++.||.|.
T Consensus       163 --~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~l  209 (282)
T 1zar_A          163 --G-LAVPKVYA-WEGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKF  209 (282)
T ss_dssp             --T-SSSCCEEE-EETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHH
T ss_pred             --C-CCcCeEEe-ccceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHH
Confidence              4 55555443 356799999999999988 421         12446888888888763

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.72  E-value=2.7e-08  Score=66.57  Aligned_cols=101  Identities=12%  Similarity=0.085  Sum_probs=68.0

Q ss_pred             CcccceeecccCceee------cCCcE--EEEEEeccCCccc------------------------HHHHHHHHHHHhhC
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHE--IAVKRLSRSSSQG------------------------AQEINNEVVVVAKL   80 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~--~a~k~~~~~~~~~------------------------~~~~~~e~~~l~~l   80 (146)
                      -|.+.+.||+|+||.|      ..|..  +|+|+++......                        ..++.+|+..+..+
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            3668899999999998      25777  9999875431110                        13678899999988


Q ss_pred             CCCCe--eeEeeEEEcCCceeEEEEecCC-C----CHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150           81 QHINL--VRLLGFCLEREEKILVYEYVPN-K----RLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus        81 ~h~~i--~~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      .|+++  +.++..    +..++||||+.+ |    +|.+....      .++..+..++.|++.+|.|.|
T Consensus       128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH  187 (258)
T 1zth_A          128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLY  187 (258)
T ss_dssp             HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHH
Confidence            77653  333332    356899999942 4    66665422      234457788889999887644

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.70  E-value=3.5e-08  Score=70.24  Aligned_cols=112  Identities=12%  Similarity=0.073  Sum_probs=74.0

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCc---ccHHHHHHHHHHHhhCCC-CCe---------eeEee
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS---QGAQEINNEVVVVAKLQH-INL---------VRLLG   90 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~---~~~~~~~~e~~~l~~l~h-~~i---------~~l~~   90 (146)
                      ..+.|...+.||+|+||.|      ..|..+|+|++.....   .....+.+|+.++..+.| .+.         +....
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            3345888899999999999      3578999999873322   235678899999998876 211         10011


Q ss_pred             E------------EEc-----CCceeEEEEecCCCCHHHhhcC----CCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           91 F------------CLE-----REEKILVYEYVPNKRLDNFLYE----PEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        91 ~------------~~~-----~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .            +..     ....+++++. .+++|.+++..    ......+++..+..++.|++.||.|.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  227 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL  227 (413)
T ss_dssp             EEECCC---------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcccCCCCccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            1            111     1235566664 45799998841    11234477888999999999999874

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.37  E-value=2e-07  Score=65.94  Aligned_cols=105  Identities=10%  Similarity=0.046  Sum_probs=64.0

Q ss_pred             hhHHHHHccCcccceeecccCceee-----cCCcEEEEEEeccCCcc--------------cH--------HHHHHHHHH
Q 048150           24 FETIEDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQ--------------GA--------QEINNEVVV   76 (146)
Q Consensus        24 ~~~~~~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~--------------~~--------~~~~~e~~~   76 (146)
                      ...+.....-|.+...||+|+||.|     ..|..+|+|+++.....              ..        -+..+|...
T Consensus        87 L~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~n  166 (397)
T 4gyi_A           87 LHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAF  166 (397)
T ss_dssp             HHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH
Confidence            3445555555999999999999999     46789999987532100              00        112355666


Q ss_pred             HhhCCCCCe--eeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           77 VAKLQHINL--VRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        77 l~~l~h~~i--~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |.++.+..+  +..+..    +..+|||||+++++|.++...         .....+..|++.+|.+
T Consensus       167 L~rL~~~gv~vp~p~~~----~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~  220 (397)
T 4gyi_A          167 MKALYEEGFPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILR  220 (397)
T ss_dssp             HHHHHHTTCSCCCEEEE----ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCeeeec----cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHH
Confidence            666644333  222222    223699999999888765421         1234556677777765

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.11  E-value=2.5e-05  Score=51.97  Aligned_cols=85  Identities=8%  Similarity=0.018  Sum_probs=63.2

Q ss_pred             HccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC-CCCeeeEeeEEEcCCceeEEEEe
Q 048150           30 ATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ-HINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ...+|.....++.|+.+.|    ..+..+++|............+.+|+.++..+. +..++++++.+...+..+++||+
T Consensus        12 ~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~   91 (263)
T 3tm0_A           12 LIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE   91 (263)
T ss_dssp             HHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred             HhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence            3456777777787777766    346789999986421122345778888888874 56677888888888889999999


Q ss_pred             cCCCCHHHhh
Q 048150          105 VPNKRLDNFL  114 (146)
Q Consensus       105 ~~~g~L~~~l  114 (146)
                      ++|.+|.+.+
T Consensus        92 i~G~~l~~~~  101 (263)
T 3tm0_A           92 ADGVLCSEEY  101 (263)
T ss_dssp             CSSEEHHHHC
T ss_pred             cCCeehhhcc
Confidence            9999988764

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.73  E-value=0.0091  Score=41.41  Aligned_cols=103  Identities=14%  Similarity=0.166  Sum_probs=64.5

Q ss_pred             cccceeecccCceee----cCCcEEEEEEec--cCC-cccHHHHHHHHHHHhhCCC--CCeeeEeeEEEcC---CceeEE
Q 048150           34 FSTDNKLGEGGFGVL----PNEHEIAVKRLS--RSS-SQGAQEINNEVVVVAKLQH--INLVRLLGFCLER---EEKILV  101 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v----~~~~~~a~k~~~--~~~-~~~~~~~~~e~~~l~~l~h--~~i~~l~~~~~~~---~~~~lv  101 (146)
                      ....+.++.|.++.+    ..+..+++|...  ... ......+..|..++..+..  ..+++++..+...   +..+++
T Consensus        40 ~~~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v  119 (359)
T 3dxp_A           40 PLSVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI  119 (359)
T ss_dssp             CCEEEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred             CceEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence            334667888887765    345677787764  221 1123457788888888863  4567777777655   348899


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |||+++.++.+..     ...++......++.++++.|..
T Consensus       120 me~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~  154 (359)
T 3dxp_A          120 MEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAA  154 (359)
T ss_dssp             EECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHH
Confidence            9999998764321     1225666677778888877764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.37  E-value=0.023  Score=37.15  Aligned_cols=76  Identities=14%  Similarity=0.107  Sum_probs=49.4

Q ss_pred             CcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCC--eeeEeeEEEcCCceeEEEEec
Q 048150           33 KFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHIN--LVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      ++......+.|..+.|     ..|..+++|.....   ....+..|+.++..+.+.+  ++++++.....+..+++|||+
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i   97 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV   97 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred             CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence            3444333334444555     23567899987543   2234667888887774333  556788777777789999999


Q ss_pred             CCCCHH
Q 048150          106 PNKRLD  111 (146)
Q Consensus       106 ~~g~L~  111 (146)
                      +|.++.
T Consensus        98 ~G~~l~  103 (264)
T 1nd4_A           98 PGQDLL  103 (264)
T ss_dssp             SSEETT
T ss_pred             CCcccC
Confidence            998873

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=93.89  E-value=0.73  Score=31.18  Aligned_cols=98  Identities=16%  Similarity=0.095  Sum_probs=61.9

Q ss_pred             ceeecccCceee-cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCC---CeeeEeeEEE-cCCceeEEEEecCCCCHH
Q 048150           37 DNKLGEGGFGVL-PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHI---NLVRLLGFCL-EREEKILVYEYVPNKRLD  111 (146)
Q Consensus        37 ~~~lg~g~fg~v-~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~l~~~~~-~~~~~~lv~e~~~~g~L~  111 (146)
                      ...++.|....+ .-+..+.+|...  .......+..|..++..+.+.   .++....... ..+..+++|++++|.++.
T Consensus        24 v~~l~~G~~n~v~~vg~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~  101 (306)
T 3tdw_A           24 VESLGEGFRNYAILVNGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILG  101 (306)
T ss_dssp             EEEEEECSSEEEEEETTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECH
T ss_pred             eeecCCCcceeEEEECCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECc
Confidence            455666666554 336677888752  222356788999999988542   2445555553 345578999999998887


Q ss_pred             HhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          112 NFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       112 ~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +....     .++......++.++++.|.-
T Consensus       102 ~~~~~-----~l~~~~~~~~~~~lg~~La~  126 (306)
T 3tdw_A          102 EDGMA-----VLPDDAKDRLALQLAEFMNE  126 (306)
T ss_dssp             HHHHT-----TSCHHHHHHHHHHHHHHHHH
T ss_pred             hhhhh-----hCCHHHHHHHHHHHHHHHHH
Confidence            63311     14555666677777766653

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=93.31  E-value=0.36  Score=32.50  Aligned_cols=98  Identities=14%  Similarity=0.147  Sum_probs=61.1

Q ss_pred             ceeecccCceee-cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCC--eeeEeeEEEcCC---ceeEEEEecCCCC
Q 048150           37 DNKLGEGGFGVL-PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHIN--LVRLLGFCLERE---EKILVYEYVPNKR  109 (146)
Q Consensus        37 ~~~lg~g~fg~v-~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~--i~~l~~~~~~~~---~~~lv~e~~~~g~  109 (146)
                      .+.++.|....+ .-+..+++|....  ......+..|..++..+ .+..  ++.+.......+   ..+++|++++|.+
T Consensus        25 i~~~~~G~~n~v~~v~~~~vlR~~~~--~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~  102 (304)
T 3sg8_A           25 IEISGEGNDCIAYEINRDFIFKFPKH--SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVP  102 (304)
T ss_dssp             CCEEEECSSEEEEESTTSEEEEEESS--HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEE
T ss_pred             eEecCCCCcceEEEECCEEEEEecCC--cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeE
Confidence            455778888776 3345678887542  22356688899998876 3333  333443332222   3588999999988


Q ss_pred             HHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          110 LDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       110 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +.+...     ..++......++.+++..|..
T Consensus       103 l~~~~~-----~~l~~~~~~~~~~~l~~~la~  129 (304)
T 3sg8_A          103 LTPLLL-----NNLPKQSQNQAAKDLARFLSE  129 (304)
T ss_dssp             CCHHHH-----HTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCcccc-----ccCCHHHHHHHHHHHHHHHHH
Confidence            765331     125566677777777777654

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=93.23  E-value=0.76  Score=30.14  Aligned_cols=61  Identities=20%  Similarity=0.242  Sum_probs=44.8

Q ss_pred             CcEEEEEEeccCCcccHHHHHHHHHHHhhCC-CCCeeeEeeEEEcCCceeEEEEecCCCCHHHhh
Q 048150           51 EHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ-HINLVRLLGFCLEREEKILVYEYVPNKRLDNFL  114 (146)
Q Consensus        51 ~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l  114 (146)
                      +..+.+|....   .....+..|...+..+. +-.+++++..+...+..+++||++++.++.+..
T Consensus        50 ~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~  111 (272)
T 4gkh_A           50 APELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVL  111 (272)
T ss_dssp             CCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHH
T ss_pred             CeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccc
Confidence            45677887642   23456778888887763 344667788888888899999999998887765

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=93.19  E-value=0.39  Score=32.08  Aligned_cols=76  Identities=14%  Similarity=0.191  Sum_probs=50.2

Q ss_pred             HccCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCC---CeeeEeeEEEcCCceeEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHI---NLVRLLGFCLEREEKILV  101 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~l~~~~~~~~~~~lv  101 (146)
                      ..+.+.....+|.|..+.|     ..|..+.+|............+..|+..|..+...   .++..+..    +.-+++
T Consensus        13 ~G~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv   88 (288)
T 3f7w_A           13 TGREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLA   88 (288)
T ss_dssp             HCCCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEE
T ss_pred             cCCCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEE
Confidence            3455666788888888876     56889999987544433445678898888877422   23344432    234789


Q ss_pred             EEecCCCC
Q 048150          102 YEYVPNKR  109 (146)
Q Consensus       102 ~e~~~~g~  109 (146)
                      |||++.+.
T Consensus        89 ~e~l~~~~   96 (288)
T 3f7w_A           89 MEWVDERP   96 (288)
T ss_dssp             EECCCCCC
T ss_pred             EEeecccC
Confidence            99987654

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=90.86  E-value=2.2  Score=29.14  Aligned_cols=74  Identities=19%  Similarity=0.189  Sum_probs=51.7

Q ss_pred             cccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC---CCCeeeEeeEEEcCCceeEEEEecC
Q 048150           34 FSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ---HINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      ......++.|....+    ..+..+.+|....   .....+..|...|..+.   ...+++++......+..+++||+++
T Consensus        38 i~~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~---~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~  114 (312)
T 3jr1_A           38 IKHKEKLYSGEMNEIWLINDEVQTVFVKINER---SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN  114 (312)
T ss_dssp             CCEEEEECCSSSSEEEEEESSSCEEEEEEEEG---GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred             eeeeEEeCCccceeeeEEEECCCeEEEEeCCc---ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence            344566777877655    3456788887653   23566788888887763   3456777777776778999999999


Q ss_pred             CCCH
Q 048150          107 NKRL  110 (146)
Q Consensus       107 ~g~L  110 (146)
                      +..+
T Consensus       115 G~~~  118 (312)
T 3jr1_A          115 KSKN  118 (312)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8754

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=86.15  E-value=3.7  Score=28.10  Aligned_cols=90  Identities=6%  Similarity=0.052  Sum_probs=48.0

Q ss_pred             CcEEEEEEeccCC---cccHHHHHHHHHHHhhCC-C--CCeeeEeeEEEcC---CceeEEEEecCCCCHHHhhcCC---C
Q 048150           51 EHEIAVKRLSRSS---SQGAQEINNEVVVVAKLQ-H--INLVRLLGFCLER---EEKILVYEYVPNKRLDNFLYEP---E  118 (146)
Q Consensus        51 ~~~~a~k~~~~~~---~~~~~~~~~e~~~l~~l~-h--~~i~~l~~~~~~~---~~~~lv~e~~~~g~L~~~l~~~---~  118 (146)
                      +..+.+|......   ......+..|..++..+. +  ..+++++..+...   +..+++||+++|.++.+.+...   .
T Consensus        52 ~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~~~~~~~~~~  131 (357)
T 3ats_A           52 QQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDN  131 (357)
T ss_dssp             EEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCBTTBGGGSCS
T ss_pred             CceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChhhcCccccccc
Confidence            4567777654321   001234667777777663 2  3456666665444   3468999999997765432100   0


Q ss_pred             CCCCCChHHHHHHHHHHHHHHh
Q 048150          119 KQGQWDCSRRYKIIGGRGRDCS  140 (146)
Q Consensus       119 ~~~~~~~~~~~~i~~~i~~~l~  140 (146)
                      ....++......++.++++.|.
T Consensus       132 ~~~~~~~~~~~~~~~~l~~~La  153 (357)
T 3ats_A          132 WFADAPAERQRQLQDATVAALA  153 (357)
T ss_dssp             TTTTSCHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHH
Confidence            0012344444455566665554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	146
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-19
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-18
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-18
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-18
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	5e-18
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-18
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	8e-18
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	9e-18
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-17
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-17
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-17
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-17
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-17
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	7e-17
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-16
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-16
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-16
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-16
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-16
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-15
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-15
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-15
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-15
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-14
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-14
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-14
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-14
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-14
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-14
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	6e-14
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-13
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-13
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-13
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-13
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-13
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-13
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	7e-13
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-12
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-12
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	5e-12
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-11
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-11
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-11
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-11
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-11
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-10
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-10
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-10
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-10
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-09
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-09
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-09
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-09
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-09
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-08
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-08
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-08
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-08
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-07
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-07
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	6e-04

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.0 bits (194), Expect = 2e-19
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 32  NKFSTDNKLGEGGFGV-----LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLV 86
              +   +LG G FGV        ++++A+K +   S     E   E  V+  L H  LV
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
           +L G C ++    ++ EY+ N  L N+L E   + Q       
Sbjct: 63  QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 105

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.3 bits (190), Expect = 2e-18
 Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 7/111 (6%)

Query: 12  NDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQ 65
           +D   LE L+    ++ D   K++   K+G+G  G       +    E+A+++++     
Sbjct: 1   SDEEILEKLR-SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP 59

Query: 66  GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
             + I NE++V+ + ++ N+V  L   L  +E  +V EY+    L + + E
Sbjct: 60  KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 110

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.6 bits (188), Expect = 2e-18
 Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 32  NKFSTDNKLGEGGFGV-----LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLV 86
           ++ +   ++G G FG+       N+ ++A+K + R  +   ++   E  V+ KL H  LV
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 63

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
           +L G CLE+    LV+E++ +  L ++L         +     
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM 106

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.7 bits (188), Expect = 3e-18
 Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 10/102 (9%)

Query: 37  DNKLGEGGFGV--------LPNEHEIAVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVR 87
           D +LG G FG            + ++A+K L + + +   +E+  E  ++ +L +  +VR
Sbjct: 14  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 73

Query: 88  LLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
           L+G C + E  +LV E      L  FL    ++         
Sbjct: 74  LIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL 114

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 76.3 bits (187), Expect = 5e-18
 Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 19/127 (14%)

Query: 22  FDFETIEDATNKFST---------DNKLGEGGFGV-------LPNEHEI--AVKRLSRS- 62
           F FE   +A  +F+          +  +G G FG        LP + EI  A+K L    
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 63  SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQ 122
           + +  ++  +E  ++ +  H N++ L G   +    +++ E++ N  LD+FL + + Q  
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 126

Query: 123 WDCSRRY 129
                  
Sbjct: 127 VIQLVGM 133

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.2 bits (187), Expect = 5e-18
 Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 10/111 (9%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQG---AQEINNEVVVVA 78
           +D    FS   ++G G FG       + N   +A+K++S S  Q     Q+I  EV  + 
Sbjct: 11  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70

Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
           KL+H N ++  G  L      LV EY      D      +K  Q       
Sbjct: 71  KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAV 120

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 8e-18
 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 8/106 (7%)

Query: 32  NKFSTDNKLGEGGFGV-----LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLV 86
                  +LG G FG           ++AVK L +  S        E  ++ +LQH  LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 71

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKII 132
           RL     + E   ++ EY+ N  L +FL  P    +   ++   + 
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMA 115

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 75.9 bits (186), Expect = 9e-18
 Identities = 20/104 (19%), Positives = 41/104 (39%), Gaps = 6/104 (5%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINL 85
           + +    +LG G FGV          +  A K +        + +  E+  ++ L+H  L
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
           V L     +  E +++YE++    L   + +   +   D +  Y
Sbjct: 86  VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY 129

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.6 bits (183), Expect = 1e-17
 Identities = 18/103 (17%), Positives = 43/103 (41%), Gaps = 6/103 (5%)

Query: 32  NKFSTDNKLGEGGFGV-----LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLV 86
            + +   ++G G FG         +  + +  ++  + Q  Q   NEV V+ K +H+N++
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
             +G+     +  +V ++     L + L+  E + +       
Sbjct: 68  LFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 109

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.7 bits (183), Expect = 2e-17
 Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 7/100 (7%)

Query: 27  IEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGA-QEINNEVVVVAK 79
           +E   + F   ++LG G  GV       P+   +A K +          +I  E+ V+ +
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 80  LQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK 119
                +V   G      E  +  E++    LD  L +  +
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR 100

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (182), Expect = 2e-17
 Identities = 20/115 (17%), Positives = 43/115 (37%), Gaps = 9/115 (7%)

Query: 24  FETIE---DATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEV 74
           +E +    +  + +    +LG+G FG              A K +   S +  ++   E+
Sbjct: 1   YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 60

Query: 75  VVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
            ++A   H N+V+LL          ++ E+     +D  + E E+       +  
Sbjct: 61  DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 115

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.1 bits (179), Expect = 4e-17
 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)

Query: 32  NKFSTDNKLGEGGFG----VLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
            +      +G+G FG         +++AVK +   ++   Q    E  V+ +L+H NLV+
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQ 64

Query: 88  LLGFCLEREEKI-LVYEYVPNKRLDNFLYEPEKQG-QWDCSRRY 129
           LLG  +E +  + +V EY+    L ++L    +     DC  ++
Sbjct: 65  LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 108

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 73.1 bits (179), Expect = 6e-17
 Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 7/100 (7%)

Query: 24  FETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQE-INNEVVV 76
           ++  ED  + +   + LG G F           +  +A+K +++ + +G +  + NE+ V
Sbjct: 1   WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 60

Query: 77  VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
           + K++H N+V L           L+ + V    L + + E
Sbjct: 61  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE 100

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 73.0 bits (178), Expect = 7e-17
 Identities = 31/137 (22%), Positives = 48/137 (35%), Gaps = 12/137 (8%)

Query: 20  LQFDFETIEDATNKFSTDNKLGEGGFGV-----------LPNEHEIAVKRLSRSSSQGAQ 68
           L     ++E   N       +GEG FG                  +AVK L   +S   Q
Sbjct: 1   LNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ 60

Query: 69  -EINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSR 127
            +   E  ++A+  + N+V+LLG C   +   L++EY+    L+ FL           S 
Sbjct: 61  ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 120

Query: 128 RYKIIGGRGRDCSRNFL 144
                  R        L
Sbjct: 121 SDLSTRARVSSPGPPPL 137

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.1 bits (176), Expect = 1e-16
 Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 13/131 (9%)

Query: 17  LESLQFDFETIEDATNKFSTDNKLGEGGFGVL---------PNEHEIAVKRLSRSSSQG- 66
           ++++Q            F  +  +G G FG +           +   AVK L+R +  G 
Sbjct: 14  VQAVQHVVIGPSSLIVHF--NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 71

Query: 67  AQEINNEVVVVAKLQHINLVRLLGFCLEREEKI-LVYEYVPNKRLDNFLYEPEKQGQWDC 125
             +   E +++    H N++ LLG CL  E    +V  Y+ +  L NF+           
Sbjct: 72  VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 131

Query: 126 SRRYKIIGGRG 136
              + +   +G
Sbjct: 132 LIGFGLQVAKG 142

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 2e-16
 Identities = 33/129 (25%), Positives = 45/129 (34%), Gaps = 23/129 (17%)

Query: 23  DFETIEDATNKFSTDNKLGEGGFGV---------LPNEHEIAVKRLSR---SSSQGAQEI 70
           D   +E          KLG+G FGV               +AVK L     S  +   + 
Sbjct: 9   DLRLLE----------KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF 58

Query: 71  NNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYK 130
             EV  +  L H NL+RL G  L    K+ V E  P   L + L + +         RY 
Sbjct: 59  IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117

Query: 131 IIGGRGRDC 139
           +    G   
Sbjct: 118 VQVAEGMGY 126

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 72.0 bits (176), Expect = 2e-16
 Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 6/104 (5%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINL 85
           + +    +LG G FGV               K ++         + NE+ ++ +L H  L
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
           + L     ++ E +L+ E++    L + +   + +        Y
Sbjct: 89  INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY 132

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 70.9 bits (173), Expect = 3e-16
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 8/130 (6%)

Query: 17  LESLQFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEI 70
           ++    +++  E      +  +KLG G +G             +AVK L   + +  +E 
Sbjct: 2   MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEF 60

Query: 71  NNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQG-QWDCSRRY 129
             E  V+ +++H NLV+LLG C       ++ E++    L ++L E  +Q          
Sbjct: 61  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 120

Query: 130 KIIGGRGRDC 139
                   + 
Sbjct: 121 ATQISSAMEY 130

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 4e-16
 Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 13/119 (10%)

Query: 32  NKFSTDNKLGEGGFGV-----------LPNEHEIAVKRLSRSSSQG-AQEINNEVVVVAK 79
           N+ S    LG G FG                  +AVK L  S+     + + +E+ V++ 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 80  L-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGR 137
           L  H+N+V LLG C      +++ EY     L NFL           +    +      
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.6 bits (167), Expect = 3e-15
 Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 7/107 (6%)

Query: 32  NKFSTDNKLGEGGFGV-----LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLV 86
                + KLG+G FG            +A+K L +  +   +    E  V+ KL+H  LV
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 75

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIG 133
           +L       E   +V EY+    L +FL     +             
Sbjct: 76  QLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 121

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 3e-15
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 11/93 (11%)

Query: 37  DNKLGEGGFGV--------LPNEHEIAVKRLSRSSSQGA--QEINNEVVVVAKLQHINLV 86
           D +LG G FG               +AVK L   ++  A   E+  E  V+ +L +  +V
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK 119
           R++G C E E  +LV E      L+ +L +   
Sbjct: 72  RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH 103

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 3e-15
 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 14/133 (10%)

Query: 9   NADNDITTLESLQFDFETI-EDATNKFSTDNKLGEGGFGV-----------LPNEHEIAV 56
           ++DN+   ++  +++++   E           LG G FG                 ++AV
Sbjct: 13  SSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAV 72

Query: 57  KRLSRSSSQGAQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
           K L   +    +E + +E+ ++ +L  H N+V LLG C       L++EY     L N+L
Sbjct: 73  KMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 132

Query: 115 YEPEKQGQWDCSR 127
               ++   D   
Sbjct: 133 RSKREKFSEDEIE 145

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 5e-15
 Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 8/105 (7%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQE-INNEVVVVAKLQHIN 84
             +     LGEG +G          E  +AVK +    +    E I  E+ +   L H N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 85  LVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
           +V+  G   E   + L  EY     L + + EP+       ++R+
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRF 108

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 1e-14
 Identities = 18/114 (15%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 26  TIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQG-AQEINNEVVVVA 78
            + D   +++  + +GEG +G+        N+  +A+K++S    Q   Q    E+ ++ 
Sbjct: 2   QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 61

Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKII 132
           + +H N++ +         + +   Y+    +   LY+  K            +
Sbjct: 62  RFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL 115

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (160), Expect = 2e-14
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 9/96 (9%)

Query: 33  KFSTDNKLGEGGFGV------LPNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHI 83
            F     LGEG F        L    E A+K L +           +  E  V+++L H 
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68

Query: 84  NLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK 119
             V+L     + E+      Y  N  L  ++ +   
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 104

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 3e-14
 Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 10/101 (9%)

Query: 33  KFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGA--QEINNEVVVVAKLQHIN 84
            +     +G G +G         +   +  K L   S   A  Q + +EV ++ +L+H N
Sbjct: 5   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64

Query: 85  LVRLLGFCLEREEKI--LVYEYVPNKRLDNFLYEPEKQGQW 123
           +VR     ++R      +V EY     L + + +  K+ Q+
Sbjct: 65  IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 105

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.3 bits (158), Expect = 5e-14
 Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 12/105 (11%)

Query: 32  NKFSTDNKLGEGGFGV-----------LPNEHEIAVKRLSRSSSQGA-QEINNEVVVVAK 79
            K +   +LG+G FG+              E  +A+K ++ ++S     E  NE  V+ +
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 80  LQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWD 124
               ++VRLLG   + +  +++ E +    L ++L         +
Sbjct: 80  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 124

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 5e-14
 Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 13/114 (11%)

Query: 28  EDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGA------QEINNEVV 75
           E+  + + T  +LG G F V           + A K + +  ++ +      ++I  EV 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65

Query: 76  VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
           ++ ++QH N++ L      + + IL+ E V    L +FL E E     + +  +
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL-TEEEATEF 118

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 5e-14
 Identities = 15/103 (14%), Positives = 37/103 (35%), Gaps = 7/103 (6%)

Query: 33  KFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLV 86
           K+     LG G FG+        ++     K +    +     +  E+ ++   +H N++
Sbjct: 6   KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNIL 64

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
            L       EE ++++E++    +   +     +        Y
Sbjct: 65  HLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSY 107

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 6e-14
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 34  FSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
           ++    +G G FGV        +   +A+K++ +      +  N E+ ++ KL H N+VR
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVR 77

Query: 88  LLGFCLEREEK------ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKII 132
           L  F     EK       LV +YVP        +    +           +
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (154), Expect = 1e-13
 Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 11/115 (9%)

Query: 26  TIEDATNKFSTDNKLGEGGFGV----------LPNEHEIAVKRLSRSSSQGAQ-EINNEV 74
           T E   +  +    +G G FG              E  +A+K L    ++  + +   E 
Sbjct: 1   TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 60

Query: 75  VVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
            ++ +  H N++RL G   + +  +++ EY+ N  LD FL E + +         
Sbjct: 61  GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGM 115

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 1e-13
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 10/95 (10%)

Query: 32  NKFSTDNKLGEGGFGV--------LPNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKL-Q 81
           N     + +GEG FG              + A+KR+   +S    ++   E+ V+ KL  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 82  HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
           H N++ LLG C  R    L  EY P+  L +FL +
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK 104

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 63.6 bits (154), Expect = 2e-13
 Identities = 19/102 (18%), Positives = 33/102 (32%), Gaps = 13/102 (12%)

Query: 31  TNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGA---QEINNEVVVVAKLQ 81
           ++++     LG GG         L    ++AVK L    ++          E    A L 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 82  HINLVRLLGFCLEREEKI----LVYEYVPNKRLDNFLYEPEK 119
           H  +V +               +V EYV    L + ++    
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP 107

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 63.2 bits (153), Expect = 3e-13
 Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 12/113 (10%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQ- 81
           N FS    +G GGFG              A+K L +      QG     NE ++++ +  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 82  --HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKII 132
                +V +       ++   + + +    L   L +     + D       I
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 116

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (150), Expect = 6e-13
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 13/103 (12%)

Query: 26  TIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQ---EINNEVVV 76
            +ED    F     LG+G FG         ++  +A+K L ++  + A    ++  EV +
Sbjct: 4   ALED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 59

Query: 77  VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK 119
            + L+H N++RL G+  +     L+ EY P   +   L +  K
Sbjct: 60  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 102

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.0 bits (150), Expect = 6e-13
 Identities = 19/116 (16%), Positives = 47/116 (40%), Gaps = 13/116 (11%)

Query: 26  TIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRS---SSQGAQEINNEVVV 76
           +++D    F     LG G FG         N    A+K L +      +  +  N+E ++
Sbjct: 2   SLQD----FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM 57

Query: 77  VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKII 132
           ++ + H  ++R+ G   + ++  ++ +Y+    L + L + ++            +
Sbjct: 58  LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV 113

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (149), Expect = 7e-13
 Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 12/92 (13%)

Query: 37  DNKLGEGGFGV------LPNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRL 88
           D ++G G F             E+A   L     +    Q    E  ++  LQH N+VR 
Sbjct: 14  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73

Query: 89  LGFCLEREEK----ILVYEYVPNKRLDNFLYE 116
                   +     +LV E + +  L  +L  
Sbjct: 74  YDSWESTVKGKKCIVLVTELMTSGTLKTYLKR 105

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 1e-12
 Identities = 18/110 (16%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 38  NKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQE-----INNEVVVVAKLQHINLV 86
           + LGEG F              +A+K++       A++        E+ ++ +L H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 87  RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRG 136
            LL     +    LV++++        + +          + Y ++  +G
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEV-IIKDNSLVLTPSHIKAYMLMTLQG 112

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 59.9 bits (144), Expect = 4e-12
 Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 8/122 (6%)

Query: 32  NKFSTDNKLGEGGFGV-----LPNEHEIAVK--RLSRSSSQGAQEINNEVVVVAKLQHIN 84
            K+    K+GEG +GV            A+K  RL +           E+ ++ +L+H N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 85  LVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRR-YKIIGGRGRDCSRNF 143
           +V+L      ++  +LV+E++                         +++ G      R  
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121

Query: 144 LF 145
           L 
Sbjct: 122 LH 123

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (143), Expect = 5e-12
 Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 11/108 (10%)

Query: 32  NKFSTDNKLGEGGFGVL---------PNEHEIAVKRLSRSSSQGAQE-INNEVVVVAKLQ 81
            +      +GEG FG +              +A+K     +S   +E    E + + +  
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 82  HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
           H ++V+L+G   E     ++ E      L +FL   +          Y
Sbjct: 67  HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY 113

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 1e-11
 Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 9/84 (10%)

Query: 39  KLGEGGFGV----LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLE 94
            +G+G FG          E+AVK  S    + +     E+     L+H N++  +    +
Sbjct: 10  SIGKGRFGEVWRGKWRGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNK 68

Query: 95  REEKI----LVYEYVPNKRLDNFL 114
                    LV +Y  +  L ++L
Sbjct: 69  DNGTWTQLWLVSDYHEHGSLFDYL 92

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 1e-11
 Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 8/105 (7%)

Query: 33  KFSTDNKLGEGGFGV------LPNEHEIAVK--RLSRSSSQGAQEINNEVVVVAKLQHIN 84
            F    K+GEG +GV            +A+K  RL   +         E+ ++ +L H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 85  LVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
           +V+LL       +  LV+E++                     + Y
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 107

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 2e-11
 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 12/107 (11%)

Query: 34  FSTDNKLGEGGFGV------LPNEHE----IAVKRLSRSSS-QGAQEINNEVVVVAKLQH 82
           F     LG G FG       +P   +    +A+K L  ++S +  +EI +E  V+A + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 83  INLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
            ++ RLLG CL      L+ + +P   L +++ E +          +
Sbjct: 71  PHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 116

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 2e-11
 Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 15/119 (12%)

Query: 32  NKFSTDNKLGEGGFGV-------------LPNEHEIAVKRLSRSSSQ-GAQEINNEVVVV 77
           ++      LGEG FG                   ++AVK L   +++    ++ +E+ ++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 78  AKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGR 135
             + +H N++ LLG C +     ++ EY     L  +L      G             +
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 131

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.8 bits (136), Expect = 4e-11
 Identities = 13/104 (12%), Positives = 36/104 (34%), Gaps = 8/104 (7%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINL 85
           N++    K+G G FG       +    E+A+K     +     +++ E  +   +Q    
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVG 64

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
           +  + +C    +  ++   +    L++      ++         
Sbjct: 65  IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLL 108

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 6e-11
 Identities = 21/112 (18%), Positives = 44/112 (39%), Gaps = 14/112 (12%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINN------EVVVVAK 79
           +++     LG GGFG       + +   +A+K + +       E+ N      EVV++ K
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63

Query: 80  LQ--HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
           +      ++RLL +    +  +L+ E     +            Q + +R +
Sbjct: 64  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 115

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (133), Expect = 2e-10
 Identities = 18/98 (18%), Positives = 30/98 (30%), Gaps = 10/98 (10%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEI----NNEVVVVAKLQ 81
             F     LG+G FG              A+K L +       ++      + V+    +
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 82  HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK 119
           H  L  +      +E    V EY+    L   +    K
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK 99

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 3e-10
 Identities = 21/120 (17%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 29  DATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEIN--NEVVVVAKL 80
           D  +K+    K+G+G FG            ++A+K++   + +    I    E+ ++  L
Sbjct: 7   DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 66

Query: 81  QHINLVRLLGFCLEREEKI--------LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKII 132
           +H N+V L+  C  +            LV+++  +           K    +  R  +++
Sbjct: 67  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 126

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 4e-10
 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 14/103 (13%)

Query: 32  NKFSTDNKLGEGGFGV-----------LPNEHEIAVKRLSRSSSQGAQE--INNEVVVVA 78
           ++      LG G FG                  +AVK L   ++       ++   +++ 
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 79  KLQHINLVRLLGFCLEREEKI-LVYEYVPNKRLDNFLYEPEKQ 120
              H+N+V LLG C +    + ++ E+     L  +L     +
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 115

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 6e-10
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 14/101 (13%)

Query: 25  ETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRS--SSQGAQEINNEVVV 76
           +T  +    +     +G G +G            ++A+K+L R   S   A+    E+ +
Sbjct: 11  KTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRL 70

Query: 77  VAKLQHINLVRLLGFCLERE------EKILVYEYVPNKRLD 111
           +  ++H N++ LL      E      +  LV  ++      
Sbjct: 71  LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGK 111

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.0 bits (126), Expect = 1e-09
 Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 9/106 (8%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVK--RLSRSSSQGAQEINNEVVVVAKLQHI 83
            K+    K+GEG +G             +A+K  RL             E+ ++ +L+H 
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 84  NLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
           N+VRL       ++  LV+E+        F          +  + +
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYF-DSCNGDLDPEIVKSF 106

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (124), Expect = 2e-09
 Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 16/118 (13%)

Query: 25  ETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRS--SSQGAQEINNEVVV 76
           +TI +   ++   + +G G +G             +AVK+LSR   S   A+    E+ +
Sbjct: 11  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70

Query: 77  VAKLQHINLVRLLGFCLERE-----EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
           +  ++H N++ LL              + +  ++    L+N     + Q   D   ++
Sbjct: 71  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI---VKCQKLTDDHVQF 125

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (124), Expect = 2e-09
 Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 17/124 (13%)

Query: 30  ATNKFSTDNKLGEGGFGV-------LPNEHEIAVKRLSRSSSQGAQEIN--NEVVVVAKL 80
           A  ++    ++GEG +G              +A+KR+   + +    ++   EV V+  L
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 81  ---QHINLVRLLGFCLEREEK-----ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKII 132
              +H N+VRL   C            LV+E+V           PE     +  +     
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124

Query: 133 GGRG 136
             RG
Sbjct: 125 LLRG 128

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 51.7 bits (123), Expect = 2e-09
 Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 8/111 (7%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINL 85
             +    ++GEG FGV      L N  ++A+K   R S   A ++ +E      L     
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTG 62

Query: 86  VRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRG 136
           +  + +  +     ++   +    L++ L    ++                
Sbjct: 63  IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLAR 113

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 51.6 bits (123), Expect = 3e-09
 Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 16/100 (16%)

Query: 33  KFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGA---------QEINNEVVVV 77
            +     LG G   V       P   E AVK +  +              +    EV ++
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 78  AKLQ-HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
            K+  H N+++L           LV++ +    L ++L E
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE 103

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 1e-08
 Identities = 24/122 (19%), Positives = 35/122 (28%), Gaps = 10/122 (8%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEIN---NEVVVVAKLQH 82
           N F     LG+G FG              A+K L +       E+     E  V+   +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 83  INLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSR-RYKIIGGRGRDCSR 141
             L  L       +    V EY     L   L       +        +I+       SR
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124

Query: 142 NF 143
           + 
Sbjct: 125 DV 126

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (118), Expect = 1e-08
 Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 14/103 (13%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHI 83
            ++     +G G  G+         +  +A+K+LSR   +   A+    E+V++  + H 
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76

Query: 84  NLVRLLGFCL------EREEKILVYEYVPNKRLDNFLYEPEKQ 120
           N++ LL          E ++  LV E +          E + +
Sbjct: 77  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE 119

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.6 bits (117), Expect = 2e-08
 Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 9/112 (8%)

Query: 25  ETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVA 78
           E  +D   ++    KLG G F        + N   +A+K + R      +   +E+ ++ 
Sbjct: 8   EPYKD--ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQ 64

Query: 79  KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYK 130
           ++   +  +          K+L +         + +   E  G+   +   K
Sbjct: 65  RVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK 116

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 49.5 bits (117), Expect = 2e-08
 Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 16/106 (15%)

Query: 18  ESLQFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEIN 71
           ES   ++   +D    +    KLG G +        + N  ++ VK L        ++I 
Sbjct: 25  ESHVVEWGNQDD----YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIK 77

Query: 72  NEVVVVAKLQ-HINLVRLLGFCLEREEK--ILVYEYVPNKRLDNFL 114
            E+ ++  L+   N++ L     +   +   LV+E+V N       
Sbjct: 78  REIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY 123

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 1e-07
 Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 15/129 (11%)

Query: 32  NKFSTDNKLGEGGFGV---------LPNEHEIAVKRLSRSS----SQGAQEINNEVVVVA 78
             F     LG G +G                 A+K L +++    ++  +    E  V+ 
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 79  KLQHI-NLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRR-YKIIGGRG 136
            ++    LV L        +  L+ +Y+    L   L + E+  + +      +I+    
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 143

Query: 137 RDCSRNFLF 145
                  ++
Sbjct: 144 HLHKLGIIY 152

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.7 bits (110), Expect = 2e-07
 Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 9/97 (9%)

Query: 32  NKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEIN---NEVVVVAKLQH 82
           ++F     LG G FG         + +  A+K L +      ++I    NE  ++  +  
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 83  INLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK 119
             LV+L     +     +V EYV    + + L    +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 2e-07
 Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 16/97 (16%)

Query: 36  TDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRL 88
           T   LG G  G          + + A+K L         +   EV +  +  Q  ++VR+
Sbjct: 16  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRI 70

Query: 89  LGFC----LEREEKILVYEYVPNKRLDNFLYEPEKQG 121
           +         R+  ++V E +    L + + +   Q 
Sbjct: 71  VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 107

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 36.3 bits (83), Expect = 6e-04
 Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 19/90 (21%)

Query: 38  NKLGEGGFGV-----LPNEHEIAVK--RLSRSSSQ--------GAQEINNEVVVVAKLQH 82
             +GEG              E  VK  ++  +S +        G    +   +  A+ + 
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 83  INLVRLLGFC----LEREEKILVYEYVPNK 108
             L +L G         E   ++ E +  K
Sbjct: 66  RALQKLQGLAVPKVYAWEGNAVLMELIDAK 95

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	146
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.88
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.86
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.86
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.85
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.85
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.84
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.84
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.84
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.84
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.84
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.84
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.84
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.83
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.83
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.83
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.83
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.83
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.82
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.82
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.82
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.82
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.81
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.81
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.8
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.8
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.8
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.79
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.79
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.79
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.79
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.79
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.78
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.78
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.78
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.78
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.76
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.75
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.75
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.75
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.75
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.74
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.74
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.74
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.73
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.73
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.72
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.71
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.7
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.7
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.68
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.67
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.67
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.67
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.67
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.66
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.65
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.62
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.6
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.59
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.52
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.16
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.86
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.44
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	80.17

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=8.6e-23  Score=137.61  Aligned_cols=122  Identities=20%  Similarity=0.312  Sum_probs=103.3

Q ss_pred             ccccChhHHHHHccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEE
Q 048150           19 SLQFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC   92 (146)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~   92 (146)
                      +.+-.+++|+...++|.+.+.||+|+||.|      ..+..||+|.+... ....+.+.+|+.++..++||||+++++++
T Consensus         4 p~~p~~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~   82 (287)
T d1opja_           4 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVC   82 (287)
T ss_dssp             TTSTTCCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCCCCCcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccE
Confidence            344455667777789999999999999999      34668999998643 33567799999999999999999999999


Q ss_pred             EcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           93 LEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        93 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ...+.++++|||+++|+|.+++... ....+++..+..++.|++.||.|.
T Consensus        83 ~~~~~~~iv~E~~~~g~l~~~l~~~-~~~~~~~~~~~~i~~qi~~gL~yL  131 (287)
T d1opja_          83 TREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYL  131 (287)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             eeCCeeEEEeecccCcchHHHhhhc-cccchHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998652 344689999999999999999873

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.1e-21  Score=130.18  Aligned_cols=108  Identities=20%  Similarity=0.281  Sum_probs=95.8

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ..+|...+.||+|+||.|      ..|..+|+|.+........+.+.+|+.++..++||||+++++++...+.+++||||
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            357999999999999999      45789999998765445567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|+|.+++.+    ..+++..+..++.|++.||.|.
T Consensus        99 ~~gg~L~~~~~~----~~l~~~~~~~i~~qi~~aL~yL  132 (293)
T d1yhwa1          99 LAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFL  132 (293)
T ss_dssp             CTTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHH
Confidence            999999998854    2489999999999999999873

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.86  E-value=3e-21  Score=133.21  Aligned_cols=110  Identities=16%  Similarity=0.317  Sum_probs=96.9

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      -++|.+.+.||+|+||.|      ..|..+|+|.+........+.+.+|+.++..++||||+++++++...+.+++||||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            357999999999999999      45788999999765555567788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|+|.+++.+.  ...+++..+..++.||+.||.|.
T Consensus       105 ~~gg~L~~~l~~~--~~~l~e~~~~~i~~qi~~aL~yl  140 (350)
T d1koaa2         105 MSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHM  140 (350)
T ss_dssp             CCSCBHHHHHTCT--TSCBCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999998642  34589999999999999999873

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.4e-21  Score=131.72  Aligned_cols=110  Identities=17%  Similarity=0.214  Sum_probs=96.7

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      .+.|++.+.||+|+||.|      ..+..+|+|.+........+.+.+|+.++..++||||+++++++...+.+++||||
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence            356899999999999999      45678999999766555677889999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|+|.+++.+.  ...+++..+..++.|++.||.|.
T Consensus        91 ~~~g~L~~~~~~~--~~~l~e~~~~~i~~qi~~gL~yl  126 (288)
T d2jfla1          91 CAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYL  126 (288)
T ss_dssp             CTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999987642  33589999999999999999874

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.85  E-value=5.1e-21  Score=132.11  Aligned_cols=109  Identities=16%  Similarity=0.265  Sum_probs=95.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      ++|++.+.||+|+||.|      ..|..+|+|.+..........+.+|+.++..++||||+++++++...+.+++||||+
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            56999999999999999      457899999997655445667889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|+|.+.+..  ....+++..+..++.||+.||.|.
T Consensus       109 ~gg~L~~~~~~--~~~~l~e~~~~~i~~qi~~aL~yl  143 (352)
T d1koba_         109 SGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHM  143 (352)
T ss_dssp             CCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHH
T ss_pred             CCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999998864  234589999999999999999874

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2e-21  Score=129.82  Aligned_cols=109  Identities=19%  Similarity=0.247  Sum_probs=92.6

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      .++|++.+.||+|+||.|      ..|..+|+|.+..... ...+.+.+|+.++..++||||+++++++...+.+++|||
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            367999999999999998      4578899999875432 234568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        84 y~~gg~L~~~l~~---~~~l~e~~~~~i~~qi~~al~yl  119 (271)
T d1nvra_          84 YCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYL  119 (271)
T ss_dssp             CCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCcHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999964   34589999999999999999863

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.5e-20  Score=128.33  Aligned_cols=109  Identities=13%  Similarity=0.203  Sum_probs=94.6

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      .++|.+.+.||+|+||.|      ..+..+|+|.+.... .....+.+|+.+|..++||||+++++++.+.+.+++||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            467999999999999999      457789999996543 2345678999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |++|+|.+++...  ...+++..+..++.||+.||.|.
T Consensus        83 ~~gg~L~~~i~~~--~~~l~e~~~~~i~~qi~~al~yL  118 (321)
T d1tkia_          83 ISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFL  118 (321)
T ss_dssp             CCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999652  33589999999999999999874

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.3e-20  Score=125.44  Aligned_cols=109  Identities=23%  Similarity=0.436  Sum_probs=94.4

Q ss_pred             ccCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEec
Q 048150           31 TNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV  105 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~  105 (146)
                      .++|+..+.||+|+||.|     ..+..||+|.+... ......+.+|+.++..++||||+++++++...+.++++|||+
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~   82 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   82 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence            367899999999999999     34567999998643 334677999999999999999999999999999999999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus        83 ~~g~L~~~l~~~--~~~~~~~~~~~i~~qia~gl~~l  117 (263)
T d1sm2a_          83 EHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYL  117 (263)
T ss_dssp             TTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHhh
Confidence            999999998753  34588999999999999999873

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.5e-21  Score=128.48  Aligned_cols=114  Identities=20%  Similarity=0.327  Sum_probs=94.6

Q ss_pred             HHHHHccCcccceeecccCceeec---CCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVLP---NEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v~---~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      +|....++|.+.+.||+|+||.|+   ....+|+|++...  .....+.+.+|+.++..++||||+++++++. .+.+++
T Consensus         2 dwei~~~~~~~~~~lG~G~fg~Vy~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~l   80 (276)
T d1uwha_           2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAI   80 (276)
T ss_dssp             CCBCCTTCCCCCSEEEECSSCEEEEEESSSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             CcccccccEEEEEEEeeCCCcEEEEEEECCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEE
Confidence            345567889999999999999993   3346999998644  2334678899999999999999999999764 566899


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus        81 v~Ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~gl~yL  120 (276)
T d1uwha_          81 VTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYL  120 (276)
T ss_dssp             EEECCCEEEHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999653  33589999999999999999873

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=7.6e-21  Score=126.53  Aligned_cols=108  Identities=24%  Similarity=0.381  Sum_probs=93.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|.+.+.||+|+||.|      ..+..+|+|.+...   .......+.+|+.++..++||||+++++++.+.+.+++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            57899999999999999      45778999998643   2234567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        86 Ey~~~g~L~~~l~~---~~~l~e~~~~~i~~qi~~al~~l  122 (263)
T d2j4za1          86 EYAPLGTVYRELQK---LSKFDEQRTATYITELANALSYC  122 (263)
T ss_dssp             ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             eecCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999964   33589999999999999999874

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.7e-20  Score=126.53  Aligned_cols=109  Identities=21%  Similarity=0.322  Sum_probs=94.7

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCc------ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS------QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      .+.|.+.+.||+|+||.|      ..|..+|+|.+.....      ...+.+.+|+.++..++||||+++++++.+.+.+
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            467999999999999999      4578999999864321      2357789999999999999999999999999999


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++|||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        89 ~iv~E~~~gg~L~~~i~~---~~~l~~~~~~~~~~qi~~al~yL  129 (293)
T d1jksa_          89 ILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYL  129 (293)
T ss_dssp             EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCccccchhcc---ccccchhHHHHHHHHHHHHHHhh
Confidence            999999999999999965   23589999999999999999863

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=3e-21  Score=131.10  Aligned_cols=110  Identities=18%  Similarity=0.260  Sum_probs=90.9

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ..+.|.+.+.||+|+||.|      ..+..+|+|.+...... ....+.+|+.++..++||||+++++++.+.+.++++|
T Consensus         7 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvm   86 (307)
T d1a06a_           7 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM   86 (307)
T ss_dssp             GGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            4466999999999999998      35778999999754322 2456779999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        87 E~~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~al~yl  123 (307)
T d1a06a_          87 QLVSGGELFDRIVE---KGFYTERDASRLIFQVLDAVKYL  123 (307)
T ss_dssp             CCCCSCBHHHHHHT---CSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eccCCCcHHHhhhc---ccCCCHHHHHHHHHHHHHHHHhh
Confidence            99999999999965   34589999999999999999874

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.7e-21  Score=128.66  Aligned_cols=115  Identities=23%  Similarity=0.338  Sum_probs=96.1

Q ss_pred             hHHHHHccCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ++|.++.++|++.+.||+|+||.|     ..+..||+|.+... ....+.+.+|+.++.+++||||+++++++. .+.++
T Consensus         6 ~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~   83 (272)
T d1qpca_           6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIY   83 (272)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred             CCeecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeE
Confidence            456667788999999999999999     34567999998643 335678999999999999999999999774 56789


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||||+++|+|.+++... ....+++..+..++.||++||.|.
T Consensus        84 iv~Ey~~~g~L~~~~~~~-~~~~l~~~~~~~i~~qi~~gl~~l  125 (272)
T d1qpca_          84 IITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI  125 (272)
T ss_dssp             EEEECCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999988653 233489999999999999999874

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=7.2e-21  Score=127.03  Aligned_cols=112  Identities=17%  Similarity=0.242  Sum_probs=92.8

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEc--CCceeE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLE--REEKIL  100 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~--~~~~~l  100 (146)
                      .++|.+.+.||+|+||.|      ..|..+|+|.+.....  ...+.+.+|+.++.+++||||+++++++.+  .+.+++
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            467999999999999998      4577899999865432  235668899999999999999999999864  456899


Q ss_pred             EEEecCCCCHHHhhcCCC-CCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPE-KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|||+++|+|.+++.+.. ....+++..+..++.|++.||.|.
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~yl  125 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC  125 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999986421 234589999999999999999875

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1e-20  Score=129.26  Aligned_cols=110  Identities=19%  Similarity=0.167  Sum_probs=95.4

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ..++|.+.+.||+|+||.|      ..|..+|+|.+.... ......+.+|+.++..++||||+++++++...+.+++||
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm   83 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   83 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            3568999999999999999      457789999997543 233567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++.+   ...+++..+..++.|++.||.|.
T Consensus        84 Ey~~gg~L~~~l~~---~~~l~~~~~~~~~~qil~aL~yL  120 (322)
T d1s9ja_          84 EHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYL  120 (322)
T ss_dssp             ECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EcCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999964   23589999999999999999763

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=3.3e-20  Score=123.10  Aligned_cols=108  Identities=24%  Similarity=0.403  Sum_probs=93.9

Q ss_pred             cCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecC
Q 048150           32 NKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP  106 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~  106 (146)
                      ++|++.+.||+|+||.|     ..+..||+|.++... .....+.+|+.++..++||||+++++++...+.++++|||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            68999999999999999     345589999987543 346789999999999999999999999999999999999999


Q ss_pred             CCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          107 NKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       107 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|+|.+++...  ...+++..+..++.|+++||.|.
T Consensus        83 ~g~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~~L  116 (258)
T d1k2pa_          83 NGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYL  116 (258)
T ss_dssp             TEEHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcHHHhhhcc--ccCCcHHHHHHHHHHHHHHHHHH
Confidence            99999998653  34578899999999999999873

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=4.9e-20  Score=123.88  Aligned_cols=109  Identities=22%  Similarity=0.366  Sum_probs=89.2

Q ss_pred             ccCccccee-ecccCceeecC--------CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           31 TNKFSTDNK-LGEGGFGVLPN--------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        31 ~~~~~~~~~-lg~g~fg~v~~--------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      .+++...+. ||+|+||.|+.        +..||+|.+.... ......+.+|+.++.+++||||+++++++. .+.+++
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~~l   85 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALML   85 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEE
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec-cCeEEE
Confidence            356677774 99999999933        3369999986543 334677999999999999999999999886 456899


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||||+++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus        86 vmE~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~gL~yl  125 (285)
T d1u59a_          86 VMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYL  125 (285)
T ss_dssp             EEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCcHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999988643  34589999999999999999873

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.3e-20  Score=126.93  Aligned_cols=108  Identities=20%  Similarity=0.252  Sum_probs=94.1

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|.+.+.||+|+||.|      ..+..+|+|.+...   .......+.+|+.++..++||||+++++++...+.++++|
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            57999999999999998      45778999998642   2234567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        88 Ey~~gg~L~~~~~~---~~~l~e~~~~~~~~qi~~al~yl  124 (288)
T d1uu3a_          88 SYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL  124 (288)
T ss_dssp             CCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EccCCCCHHHhhhc---cCCCCHHHHHHHHHHHHHHHHhh
Confidence            99999999998864   34589999999999999999873

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=3.1e-20  Score=125.66  Aligned_cols=110  Identities=19%  Similarity=0.364  Sum_probs=92.2

Q ss_pred             ccCcccceeecccCceeecCC---------cEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           31 TNKFSTDNKLGEGGFGVLPNE---------HEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~~---------~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      .++|++.+.||+|+||.|+.+         ..+|+|.+... .....+.+.+|+.++.+++||||+++++++...+.+++
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~i  104 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMI  104 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            356888899999999999322         24788887643 23345679999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|||+++|+|.+++...  ...+++..+..++.||+.||.|.
T Consensus       105 v~Ey~~~g~L~~~~~~~--~~~l~~~~~~~i~~qia~gl~yL  144 (299)
T d1jpaa_         105 ITEFMENGSLDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYL  144 (299)
T ss_dssp             EEECCTTEEHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCcceeeeccc--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999988753  34589999999999999999874

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.1e-20  Score=127.83  Aligned_cols=127  Identities=21%  Similarity=0.311  Sum_probs=97.8

Q ss_pred             cccccccChh-HHHHHccCcccceeecccCceeecCC-----------cEEEEEEeccC-CcccHHHHHHHHHHHhhC-C
Q 048150           16 TLESLQFDFE-TIEDATNKFSTDNKLGEGGFGVLPNE-----------HEIAVKRLSRS-SSQGAQEINNEVVVVAKL-Q   81 (146)
Q Consensus        16 ~~~~~~~~~~-~~~~~~~~~~~~~~lg~g~fg~v~~~-----------~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l-~   81 (146)
                      ..++..++++ .|..+.++|.+.+.||+|+||.|+.+           ..||+|.+... .......+.+|+.++..+ +
T Consensus        20 ~~~~~~~~~~~kwei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~   99 (325)
T d1rjba_          20 YVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS   99 (325)
T ss_dssp             ECCGGGSCCCGGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCC
T ss_pred             ecChhhcCCCccccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcC
Confidence            3344444443 45567789999999999999999322           25899988543 233456788999999988 8


Q ss_pred             CCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCCC--------------------CCCCChHHHHHHHHHHHHHHhh
Q 048150           82 HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK--------------------QGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        82 h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||||+++++++...+.++++|||+++|+|.+++.....                    ...+++..+..++.|++.||.|
T Consensus       100 HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~y  179 (325)
T d1rjba_         100 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEF  179 (325)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHH
T ss_pred             CCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999975321                    2347899999999999999987


Q ss_pred             h
Q 048150          142 N  142 (146)
Q Consensus       142 ~  142 (146)
                      .
T Consensus       180 L  180 (325)
T d1rjba_         180 L  180 (325)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.82  E-value=5.6e-20  Score=123.13  Aligned_cols=108  Identities=20%  Similarity=0.223  Sum_probs=93.1

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcc---------cHHHHHHHHHHHhhCC-CCCeeeEeeEEEcC
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ---------GAQEINNEVVVVAKLQ-HINLVRLLGFCLER   95 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~---------~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~   95 (146)
                      ++|.+.+.||+|+||.|      ..|..+|+|.+......         ....+.+|+.++..++ ||||+++++++.+.
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            68999999999999999      46778999998654221         1235789999999996 99999999999999


Q ss_pred             CceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           96 EEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        96 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +.++++|||+++|+|.+++..   ...+++..+..++.||+.||.|.
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~~l  126 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICAL  126 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEEEcCCCchHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999964   33589999999999999999873

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.82  E-value=3.8e-20  Score=125.70  Aligned_cols=108  Identities=26%  Similarity=0.317  Sum_probs=92.1

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcc---cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ---GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      +.|...+.||+|+||.|      ..+..+|+|.+......   ..+.+.+|+.++..++||||+++++++.+.+.++++|
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            45889999999999999      45678999998754322   2456889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||++|++..++..   ...+++..+..++.||+.||.|.
T Consensus        95 E~~~~g~l~~~~~~---~~~l~e~~~~~i~~qi~~aL~yL  131 (309)
T d1u5ra_          95 EYCLGSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYL  131 (309)
T ss_dssp             ECCSEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCchHHHHHh---CCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999998766643   34589999999999999999874

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.2e-20  Score=124.79  Aligned_cols=115  Identities=22%  Similarity=0.299  Sum_probs=95.0

Q ss_pred             hHHHHHccCcccceeecccCceee-----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ++|.+..++|++.+.||+|+||.|     ..+..||+|.+... ....+.+.+|+.++..++|+||+++++++ ..+..+
T Consensus        10 ~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~-~~~~~~   87 (285)
T d1fmka3          10 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIY   87 (285)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSCE
T ss_pred             cceEcCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEE-ecCCeE
Confidence            344455678999999999999999     34457999998643 33567899999999999999999999988 456689


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|||+++|+|..++... ....+++..+..++.||+.||.|.
T Consensus        88 lv~Ey~~~g~l~~~~~~~-~~~~l~~~~~~~i~~~i~~gl~~L  129 (285)
T d1fmka3          88 IVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYV  129 (285)
T ss_dssp             EEECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCchhhhhhhc-ccccchHHHHHHHHHHHHHHHHHH
Confidence            999999999999888652 233589999999999999999863

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=9.3e-20  Score=125.06  Aligned_cols=108  Identities=19%  Similarity=0.135  Sum_probs=94.3

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|.+.+.||+|+||.|      ..|..+|+|++...   .......+.+|+.+|..++||||+++++++.+.+.+++||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            57999999999999998      56789999999643   2234567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|.
T Consensus        85 ey~~gg~L~~~~~~---~~~~~e~~~~~~~~qil~al~yl  121 (337)
T d1o6la_          85 EYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYL  121 (337)
T ss_dssp             ECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eccCCCchhhhhhc---ccCCcHHHHHHHHHHHhhhhhhh
Confidence            99999999999865   34588999999999999999873

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=8.2e-21  Score=126.31  Aligned_cols=112  Identities=23%  Similarity=0.289  Sum_probs=92.0

Q ss_pred             HHHHccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc-CCceeEE
Q 048150           27 IEDATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLE-REEKILV  101 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~-~~~~~lv  101 (146)
                      |....++|+..+.||+|+||.|    ..|..+|+|.++..  ...+.+.+|+.++.+++||||+++++++.. .+.+++|
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv   79 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   79 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEE
Confidence            3345567889999999999998    56789999998643  346778999999999999999999998865 4568999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |||+++|+|.+++... ....+++..+..++.||+.||.|
T Consensus        80 ~ey~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~al~y  118 (262)
T d1byga_          80 TEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEY  118 (262)
T ss_dssp             ECCCTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             EeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHhhccc
Confidence            9999999999999652 22347899999999999999976

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=8.7e-20  Score=124.02  Aligned_cols=130  Identities=24%  Similarity=0.334  Sum_probs=104.9

Q ss_pred             ccccccccccChh-HHHHHccCcccceeecccCceeecCC-----------cEEEEEEeccCC-cccHHHHHHHHHHHhh
Q 048150           13 DITTLESLQFDFE-TIEDATNKFSTDNKLGEGGFGVLPNE-----------HEIAVKRLSRSS-SQGAQEINNEVVVVAK   79 (146)
Q Consensus        13 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~g~fg~v~~~-----------~~~a~k~~~~~~-~~~~~~~~~e~~~l~~   79 (146)
                      +....++.+++++ .|....++|.+.+.||+|+||.|+.+           ..+|+|.+.... ......+.+|+.++..
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~   82 (311)
T d1t46a_           3 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY   82 (311)
T ss_dssp             TTCCCCTTTSCCCGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHH
T ss_pred             CceeeCcccCCCcccccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHh
Confidence            4455667777754 57777789999999999999999432           369999997543 2235578899999999


Q ss_pred             C-CCCCeeeEeeEEEcCCceeEEEEecCCCCHHHhhcCCC---------------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           80 L-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE---------------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        80 l-~h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      + +||||+++++++...+.++++|||+++|+|.++++...               ....+++..+..++.||+.||.|.
T Consensus        83 l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~L  161 (311)
T d1t46a_          83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL  161 (311)
T ss_dssp             HCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence            8 69999999999999999999999999999999986421               223588999999999999999873

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.1e-19  Score=119.91  Aligned_cols=106  Identities=19%  Similarity=0.188  Sum_probs=88.1

Q ss_pred             cccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc----CCceeEE
Q 048150           34 FSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLE----REEKILV  101 (146)
Q Consensus        34 ~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~----~~~~~lv  101 (146)
                      |+..+.||+|+||.|      ..+..+|+|.+...  .......+.+|+.++.+++||||+++++++..    .+.++++
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            467778999999999      35678999998643  22235678899999999999999999999865    3458999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+++|+|.+++.+   ...+++..+..++.|++.||.|.
T Consensus        91 mE~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~gl~yL  128 (270)
T d1t4ha_          91 TELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFL  128 (270)
T ss_dssp             EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCCcHHHHHhc---cccccHHHHHHHHHHHHHHHHHH
Confidence            999999999999964   34588999999999999999864

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=2.1e-19  Score=122.32  Aligned_cols=107  Identities=17%  Similarity=0.270  Sum_probs=92.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|++.+.||+|+||.|      ..|..+|+|++...   .....+.+.+|+.++..++||||+++++++...+.+++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            57899999999999998      45789999998642   2234677889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      ||+++|+|..++..   ...+++..+..++.|++.||.|
T Consensus        84 E~~~gg~l~~~~~~---~~~~~~~~~~~~~~qi~~al~~  119 (316)
T d1fota_          84 DYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEY  119 (316)
T ss_dssp             CCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHH
T ss_pred             eecCCccccccccc---cccccccHHHHHHHHHHHhhhh
Confidence            99999999998864   3347888899999999999976

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.4e-19  Score=120.92  Aligned_cols=112  Identities=17%  Similarity=0.230  Sum_probs=91.7

Q ss_pred             HHHccCcccceeecccCceeecC---------CcEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc
Q 048150           28 EDATNKFSTDNKLGEGGFGVLPN---------EHEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREE   97 (146)
Q Consensus        28 ~~~~~~~~~~~~lg~g~fg~v~~---------~~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~   97 (146)
                      ++..++|.+.+.||+|+||.|+.         +..+|+|.+..... .....+.+|+.++..++||||+++++++. .+.
T Consensus         3 ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~   81 (273)
T d1mp8a_           3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP   81 (273)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred             CcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCe
Confidence            34567899999999999999932         23588888864432 23567899999999999999999999884 567


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++|||+++|+|.+++..  ....+++..+..++.|++.||.|.
T Consensus        82 ~~iv~E~~~~g~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~yl  124 (273)
T d1mp8a_          82 VWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYL  124 (273)
T ss_dssp             CEEEEECCTTEEHHHHHHH--TTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeccCCcHHhhhhc--cCCCCCHHHHHHHHHHHHHHhhhh
Confidence            8999999999999998764  234589999999999999999873

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.79  E-value=4e-19  Score=118.90  Aligned_cols=109  Identities=19%  Similarity=0.259  Sum_probs=92.0

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcc---cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc----
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ---GAQEINNEVVVVAKLQHINLVRLLGFCLEREE----   97 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~----   97 (146)
                      .++|.+.+.||+|+||.|      ..|..+|+|.+......   ....+.+|+.++..++||||+++++++...+.    
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            467999999999999999      45778999999754332   24568899999999999999999999876543    


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||||+++|+|.+.+..   ...+++..+..++.|++.||.|.
T Consensus        86 ~~lvmE~~~g~~L~~~~~~---~~~l~~~~~~~i~~qi~~al~~l  127 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFS  127 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEECCCCCEehhhhcc---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            7899999999999998864   33589999999999999999873

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.9e-19  Score=120.71  Aligned_cols=110  Identities=26%  Similarity=0.449  Sum_probs=90.2

Q ss_pred             cCcccceeecccCceeecC------Cc--EEEEEEeccC-CcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcCCceeEE
Q 048150           32 NKFSTDNKLGEGGFGVLPN------EH--EIAVKRLSRS-SSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~~------~~--~~a~k~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ++|++.+.||+|+||.|+.      +.  .||+|.+... .....+.+.+|+.++..+ +||||+++++++...+.+++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            6788899999999999933      22  4778887533 233456789999999998 799999999999999999999


Q ss_pred             EEecCCCCHHHhhcCC-------------CCCCCCChHHHHHHHHHHHHHHhh
Q 048150          102 YEYVPNKRLDNFLYEP-------------EKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |||+++|+|.++++..             .....+++..+..++.||+.||.|
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~  142 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDY  142 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHh
Confidence            9999999999999753             224568999999999999999986

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=4.1e-19  Score=118.87  Aligned_cols=101  Identities=23%  Similarity=0.344  Sum_probs=82.8

Q ss_pred             eeecccCceeecC--------CcEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEecCC
Q 048150           38 NKLGEGGFGVLPN--------EHEIAVKRLSRSS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPN  107 (146)
Q Consensus        38 ~~lg~g~fg~v~~--------~~~~a~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~~~~  107 (146)
                      +.||+|+||.|+.        +..||+|.++...  ......+.+|+.++.+++||||+++++++. .+..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~-~~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEec-cCCEEEEEEcCCC
Confidence            4699999999933        2469999986432  223567999999999999999999999885 4567899999999


Q ss_pred             CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          108 KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       108 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+|.+++.+   ...+++..+..++.||+.||.|.
T Consensus        92 g~L~~~l~~---~~~l~~~~~~~i~~qi~~gl~yl  123 (277)
T d1xbba_          92 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYL  123 (277)
T ss_dssp             EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHhh---ccCCCHHHHHHHHHHHHHHHhhH
Confidence            999999864   34589999999999999999874

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=4.6e-19  Score=118.99  Aligned_cols=110  Identities=21%  Similarity=0.372  Sum_probs=92.4

Q ss_pred             ccCcccceeecccCceeecCC----------cEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           31 TNKFSTDNKLGEGGFGVLPNE----------HEIAVKRLSRSSS-QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~~----------~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      .++|...+.||+|+||.|+.+          ..||+|.+..... .....+.+|+.++..++||||+++++++...+.++
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            367889999999999999432          2689999865432 23456889999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||+.+|++.+.+...  ...+++..+..++.|++.||.|.
T Consensus        86 ~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~~i~~gl~~l  126 (283)
T d1mqba_          86 IITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYL  126 (283)
T ss_dssp             EEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecccCcchhhhhcc--cccccHHHHHHHHHHHHHhhhhc
Confidence            999999999999988653  34589999999999999999874

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=3.3e-19  Score=120.60  Aligned_cols=117  Identities=24%  Similarity=0.384  Sum_probs=96.6

Q ss_pred             HHHHHccCcccceeecccCceeecC-----------CcEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCCeeeEeeEEE
Q 048150           26 TIEDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSSSQ-GAQEINNEVVVVAKLQHINLVRLLGFCL   93 (146)
Q Consensus        26 ~~~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~l~~~~~   93 (146)
                      +++.+.++|.+.+.||+|+||.|+.           +..||+|.+...... ....+.+|+.++..++|+|++++++++.
T Consensus         7 ~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~   86 (301)
T d1lufa_           7 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA   86 (301)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             hccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeec
Confidence            4455678899999999999999932           257999998654322 3567999999999999999999999999


Q ss_pred             cCCceeEEEEecCCCCHHHhhcCCC---------------------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           94 EREEKILVYEYVPNKRLDNFLYEPE---------------------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        94 ~~~~~~lv~e~~~~g~L~~~l~~~~---------------------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..+..++++||+++|+|.+++....                     ....+++..+..++.|++.||.|.
T Consensus        87 ~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yl  156 (301)
T d1lufa_          87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL  156 (301)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhc
Confidence            9999999999999999999986321                     123478899999999999999873

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=4.9e-19  Score=120.69  Aligned_cols=108  Identities=19%  Similarity=0.207  Sum_probs=90.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHh-hCCCCCeeeEeeEEEcCCceeEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVA-KLQHINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~-~l~h~~i~~l~~~~~~~~~~~lv  101 (146)
                      ++|.+.+.||+|+||.|      ..+..+|+|.+...   .......+..|..++. .++||||+++++++...+.+++|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            57899999999999999      46788999999642   1233556677777655 68999999999999999999999


Q ss_pred             EEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          102 YEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       102 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |||+++|+|.+++..   ...+++..+..++.||+.||.|.
T Consensus        82 mEy~~~g~L~~~i~~---~~~~~e~~~~~~~~qi~~al~yl  119 (320)
T d1xjda_          82 MEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFL  119 (320)
T ss_dssp             EECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EeecCCCcHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999964   33478899999999999999874

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.2e-18  Score=117.66  Aligned_cols=109  Identities=19%  Similarity=0.285  Sum_probs=88.7

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ++|++.+.||+|+||.|      ..|..+|+|++.....  .....+.+|+.++..++||||+++++++.+.+.++++||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            57999999999999998      4578899999964422  235678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      |+.++ +.+++.. .....+++..+..++.|++.||.|.
T Consensus        82 ~~~~~-~~~~~~~-~~~~~l~e~~~~~~~~qil~~L~yL  118 (298)
T d1gz8a_          82 FLHQD-LKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFC  118 (298)
T ss_dssp             CCSEE-HHHHHHH-TTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCc-hhhhhhh-hcccCCCHHHHHHHHHHHHHHHHHh
Confidence            99875 4444432 2344589999999999999999873

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=1.7e-18  Score=119.29  Aligned_cols=108  Identities=19%  Similarity=0.200  Sum_probs=93.7

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~  102 (146)
                      ++|.+.+.||+|+||.|      ..|..+|+|.+...   .......+.+|+.++..++||||+++++++...+.+++++
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            46999999999999999      45789999998632   2234567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+.+|+|...+..   ...+++..+..++.||+.||.|.
T Consensus       121 e~~~~g~l~~~l~~---~~~l~e~~~~~i~~qi~~aL~yL  157 (350)
T d1rdqe_         121 EYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYL  157 (350)
T ss_dssp             ECCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhhHhh---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999864   23589999999999999999873

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.2e-18  Score=117.68  Aligned_cols=115  Identities=21%  Similarity=0.346  Sum_probs=89.8

Q ss_pred             HHHHccCcccceeecccCceeecCC-------------cEEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCCeeeEeeE
Q 048150           27 IEDATNKFSTDNKLGEGGFGVLPNE-------------HEIAVKRLSRSSS-QGAQEINNEVVVVAKL-QHINLVRLLGF   91 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v~~~-------------~~~a~k~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~l~~~   91 (146)
                      |..+.++|.+.+.||+|+||.|+.+             ..||+|.+..... .....+..|...+.++ +||||++++++
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~   87 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA   87 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccc
Confidence            4566788999999999999998322             3689999865432 2356788888888877 89999999999


Q ss_pred             EEcCCceeEEEEecCCCCHHHhhcCCCC-------------CCCCChHHHHHHHHHHHHHHhh
Q 048150           92 CLEREEKILVYEYVPNKRLDNFLYEPEK-------------QGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        92 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +...+.++++|||+++|+|.+++.....             ...+++..+..++.|++.||.|
T Consensus        88 ~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~y  150 (299)
T d1fgka_          88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY  150 (299)
T ss_dssp             ECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999975321             2348999999999999999987

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.5e-18  Score=115.94  Aligned_cols=109  Identities=26%  Similarity=0.318  Sum_probs=83.2

Q ss_pred             ccCcccceeecccCceeecCC---------cEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCce
Q 048150           31 TNKFSTDNKLGEGGFGVLPNE---------HEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK   98 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v~~~---------~~~a~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~   98 (146)
                      .++|++.+.||+|+||.|+.+         ..||+|.+...   .......+.+|+.++..++||||+++++++.. +.+
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~   85 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM   85 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence            367899999999999999322         26899998643   22235678999999999999999999999965 567


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++||+++|++.+.+...  ...+++..+..++.|++.||.|.
T Consensus        86 ~lv~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~qi~~gl~yl  127 (273)
T d1u46a_          86 KMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYL  127 (273)
T ss_dssp             EEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHH
T ss_pred             heeeeeecCcchhhhhhcc--cCCCCHHHHHHHHHHHHHHHHHh
Confidence            8999999999999887642  33589999999999999999873

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=6.3e-18  Score=115.03  Aligned_cols=108  Identities=23%  Similarity=0.363  Sum_probs=87.9

Q ss_pred             cCcccceeecccCceeecC------Cc----EEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeE
Q 048150           32 NKFSTDNKLGEGGFGVLPN------EH----EIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKIL  100 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~~------~~----~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~l  100 (146)
                      ++|+..+.||+|+||.|+.      |.    .||+|.+... .....+.+.+|+.++..++||||+++++++.. +..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeeE
Confidence            5699999999999999933      22    5888888643 33446789999999999999999999999875 45678


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++++.+|+|.+.+...  ...+++..+..++.||+.||.|.
T Consensus        88 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~yL  127 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYL  127 (317)
T ss_dssp             EEECCTTCBHHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeccCCccccccccc--ccCCCHHHHHHHHHHHHHHHHHH
Confidence            89999999999988653  44589999999999999999874

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.6e-18  Score=117.58  Aligned_cols=118  Identities=21%  Similarity=0.339  Sum_probs=96.8

Q ss_pred             hHHHHHccCcccceeecccCceeecC-----------CcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEE
Q 048150           25 ETIEDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFC   92 (146)
Q Consensus        25 ~~~~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~   92 (146)
                      ++|....++|.+.+.||+|+||.|+.           +..||+|.+.... ......+.+|+.++.+++||||+++++.+
T Consensus        13 ~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~   92 (308)
T d1p4oa_          13 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV   92 (308)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             cceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEE
Confidence            35666678899999999999999942           3578999986432 22345688999999999999999999999


Q ss_pred             EcCCceeEEEEecCCCCHHHhhcCC-------CCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           93 LEREEKILVYEYVPNKRLDNFLYEP-------EKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        93 ~~~~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ...+..++++||+++|+|.+++...       .....+++..+..++.|+++||.|.
T Consensus        93 ~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~L  149 (308)
T d1p4oa_          93 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL  149 (308)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999988631       1223468889999999999999874

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.74  E-value=3.6e-18  Score=118.25  Aligned_cols=108  Identities=18%  Similarity=0.173  Sum_probs=88.2

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCC---cccHHHHHH---HHHHHhhCCCCCeeeEeeEEEcCCcee
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS---SQGAQEINN---EVVVVAKLQHINLVRLLGFCLEREEKI   99 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~---~~~~~~~~~---e~~~l~~l~h~~i~~l~~~~~~~~~~~   99 (146)
                      ++|.+.+.||+|+||.|      ..|..+|+|++....   ......+..   ++.++..+.||||+++++++...+.++
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            57999999999999999      457899999985321   112233333   466777788999999999999999999


Q ss_pred             EEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          100 LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       100 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +||||+++|+|.+++.+   ...+++..+..++.||+.||.|.
T Consensus        84 ivmE~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~yl  123 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHM  123 (364)
T ss_dssp             EEECCCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCcHHHHHHh---cccccHHHHHHHHHHHHHHHHHH
Confidence            99999999999999965   34578899999999999999873

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=7.2e-18  Score=114.46  Aligned_cols=104  Identities=21%  Similarity=0.320  Sum_probs=86.0

Q ss_pred             ceeecccCceeecCC---------cEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc-CCceeEEEEec
Q 048150           37 DNKLGEGGFGVLPNE---------HEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLLGFCLE-REEKILVYEYV  105 (146)
Q Consensus        37 ~~~lg~g~fg~v~~~---------~~~a~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~-~~~~~lv~e~~  105 (146)
                      .++||+|+||.|+.+         ..||+|.+... .......+.+|+.++.+++||||+++++++.. .+..++||||+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            678999999999432         25899998643 33346779999999999999999999999875 45789999999


Q ss_pred             CCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          106 PNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       106 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++|+|.+++...  ...+++..+..++.|++.||.|.
T Consensus       112 ~~g~l~~~~~~~--~~~~~~~~~~~i~~qia~gL~~l  146 (311)
T d1r0pa_         112 KHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFL  146 (311)
T ss_dssp             TTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHH
T ss_pred             ecCchhhhhccc--cccchHHHHHHHHHHHHHhhhhh
Confidence            999999998753  34477888999999999999873

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.7e-18  Score=116.46  Aligned_cols=106  Identities=17%  Similarity=0.210  Sum_probs=86.8

Q ss_pred             ccCcccce-eecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhh-CCCCCeeeEeeEEEc----CCce
Q 048150           31 TNKFSTDN-KLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAK-LQHINLVRLLGFCLE----REEK   98 (146)
Q Consensus        31 ~~~~~~~~-~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~l~~~~~~----~~~~   98 (146)
                      .++|.+.. .||+|+||.|      ..+..+|+|.+..     ...+.+|+.++.+ .+||||+++++++.+    ...+
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            35787764 6999999999      4578999999852     3456789988655 589999999999865    3568


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +++||||++|+|.+++.+. ....+++..+..++.|++.||.|.
T Consensus        85 ~ivmEy~~gg~L~~~i~~~-~~~~l~e~~~~~i~~qi~~al~yl  127 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYL  127 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSC-SCCCEEHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCcHHHHHHhc-CCCCcCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999753 234589999999999999999873

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.73  E-value=1.7e-17  Score=111.33  Aligned_cols=108  Identities=18%  Similarity=0.255  Sum_probs=92.1

Q ss_pred             cCcccceeecccCceee-----cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVL-----PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++|.+.+.||+|+||.|     ..|..+|+|.+.....  .....+.+|+.+|..++||||+++++.+...+..++++++
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            57899999999999999     4567899999965432  2357789999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +.++.+..+...   ...+++..+..++.|++.||.|.
T Consensus        82 ~~~~~~~~~~~~---~~~l~~~~~~~i~~qi~~~L~~L  116 (286)
T d1ob3a_          82 LDQDLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYC  116 (286)
T ss_dssp             CSEEHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ehhhhHHHHHhh---cCCcchhhhHHHHHHHHHHHHHh
Confidence            998777666543   34589999999999999999873

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1e-17  Score=113.01  Aligned_cols=104  Identities=15%  Similarity=0.131  Sum_probs=83.7

Q ss_pred             cceeecccCceee------cCCcEEEEEEeccCCcc-----cHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEEe
Q 048150           36 TDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ-----GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        36 ~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ..++||+|+||.|      ..|..+|+|++......     ....+.+|+.++..++||||+++++++...+.+++||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            4678999999999      45778999998643221     134688999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +.++++..+..   ....+++..+..++.||+.||.|.
T Consensus        82 ~~~~~~~~~~~---~~~~l~~~~~~~~~~qil~aL~~l  116 (299)
T d1ua2a_          82 METDLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYL  116 (299)
T ss_dssp             CSEEHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHH
T ss_pred             hcchHHhhhhh---cccCCCHHHHHHHHHHHHHHHHHh
Confidence            99987766653   234588889999999999999873

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.1e-17  Score=112.98  Aligned_cols=121  Identities=18%  Similarity=0.291  Sum_probs=91.9

Q ss_pred             cChhHHHHHccCcccceeecccCceeecC-----------CcEEEEEEeccCC-cccHHHHHHHHHHHhhC-CCCCeeeE
Q 048150           22 FDFETIEDATNKFSTDNKLGEGGFGVLPN-----------EHEIAVKRLSRSS-SQGAQEINNEVVVVAKL-QHINLVRL   88 (146)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~lg~g~fg~v~~-----------~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~l   88 (146)
                      +....|..+.++|.+.+.||+|+||.|+.           +..||+|.+.... ......+..|...+.++ +|++++.+
T Consensus         3 ~~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~   82 (299)
T d1ywna1           3 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   82 (299)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEe
Confidence            45567777778999999999999999932           2469999986432 22345677777777766 78999999


Q ss_pred             eeEEEcC-CceeEEEEecCCCCHHHhhcCCC-------------CCCCCChHHHHHHHHHHHHHHhhh
Q 048150           89 LGFCLER-EEKILVYEYVPNKRLDNFLYEPE-------------KQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        89 ~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+++... +.++++|||+++|+|.+++....             ....+++..+..++.||+.||.|.
T Consensus        83 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~yl  150 (299)
T d1ywna1          83 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL  150 (299)
T ss_dssp             EEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHH
T ss_pred             eeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHH
Confidence            9887654 46899999999999999996422             123478999999999999999873

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.6e-17  Score=112.40  Aligned_cols=106  Identities=18%  Similarity=0.212  Sum_probs=85.6

Q ss_pred             ccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHH--HHHHHhhCCCCCeeeEeeEEEcCC----ceeE
Q 048150           31 TNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINN--EVVVVAKLQHINLVRLLGFCLERE----EKIL  100 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~--e~~~l~~l~h~~i~~l~~~~~~~~----~~~l  100 (146)
                      +++|.+.+.||+|+||.|    ..|..||+|.+...   ....+..  |+..+..++||||+++++++...+    .+++
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            467888999999999999    56779999998532   3333444  444455779999999999998654    4799


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF  143 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~~  143 (146)
                      ||||+++|+|.+++++    ..+++..+..++.+++.||.|.+
T Consensus        79 v~Ey~~~g~L~~~l~~----~~l~~~~~~~~~~~ia~gl~~lH  117 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLH  117 (303)
T ss_dssp             EEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecccCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999964    24889999999999999998764

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=8e-17  Score=108.10  Aligned_cols=108  Identities=20%  Similarity=0.271  Sum_probs=93.0

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCceeEEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ++|++.+.||+|+||.|      ..+..+|+|+++....  .....+.+|+.++..++|+|++++.+++...+..+++++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            47899999999999999      4567899999865432  235778899999999999999999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++.++++..++..   ...+++..+..++.|++.||.|.
T Consensus        82 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~q~~~aL~~l  117 (292)
T d1unla_          82 FCDQDLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFC  117 (292)
T ss_dssp             CCSEEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ecccccccccccc---ccccchhHHHHHHHHHHHHHHHh
Confidence            9999998888754   34578899999999999999863

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.70  E-value=9.7e-17  Score=109.47  Aligned_cols=102  Identities=18%  Similarity=0.234  Sum_probs=86.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCCeeeEeeEEEcC--CceeEEE
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLER--EEKILVY  102 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~l~~~~~~~--~~~~lv~  102 (146)
                      ++|++.+.||+|+||.|      ..|..||+|+++..   ....+.+|+.+|..+ .||||+++++++...  ..++++|
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            57999999999999999      45778999998643   456788999999998 499999999998754  4689999


Q ss_pred             EecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          103 EYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       103 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ||+.+++|....+      .+++..+..++.||+.||.|.
T Consensus       112 e~~~~~~L~~~~~------~l~e~~i~~i~~qil~aL~~L  145 (328)
T d3bqca1         112 EHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYC  145 (328)
T ss_dssp             ECCCSCBGGGTTT------SCCHHHHHHHHHHHHHHHHHH
T ss_pred             eecCCCcHHHHhc------CCCHHHHHHHHHHHHHHHHHH
Confidence            9999999876642      388999999999999999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=4.9e-17  Score=111.96  Aligned_cols=106  Identities=22%  Similarity=0.253  Sum_probs=82.3

Q ss_pred             CcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC------CceeE
Q 048150           33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER------EEKIL  100 (146)
Q Consensus        33 ~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~------~~~~l  100 (146)
                      +|...++||+|+||.|      ..|..+|+|.+......    ..+|+.+|..++|+|++++++++...      .++++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            5788899999999999      35788999999654321    23799999999999999999998543      34789


Q ss_pred             EEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150          101 VYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus       101 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      +|||++++.+..+.........+++..+..++.|++.||.|.
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yL  138 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI  138 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            999998764444332222344689999999999999999863

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.4e-16  Score=109.50  Aligned_cols=108  Identities=14%  Similarity=0.210  Sum_probs=85.2

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCCc----e
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREE----K   98 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~~----~   98 (146)
                      .+++|.+++.||+|+||.|      ..|..+|+|++.... ......+.+|+.+|..++||+++++++.+.....    .
T Consensus         6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~   85 (345)
T d1pmea_           6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD   85 (345)
T ss_dssp             CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence            3467999999999999998      467889999996543 2335678899999999999999999999875432    3


Q ss_pred             eEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           99 ILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        99 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++++.+|+|.+++..    ..+++..+..++.|++.||.|
T Consensus        86 ~~l~~~~~~g~L~~~l~~----~~l~~~~i~~i~~qil~al~y  124 (345)
T d1pmea_          86 VYLVTHLMGADLYKLLKT----QHLSNDHICYFLYQILRGLKY  124 (345)
T ss_dssp             EEEEEECCCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeecCCchhhhhhc----CCCCHHHHHHHHHHHHHHHHH
Confidence            455567789999999964    248999999999999999987

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.9e-16  Score=108.72  Aligned_cols=108  Identities=18%  Similarity=0.225  Sum_probs=88.9

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcC-----Cc
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLER-----EE   97 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~-----~~   97 (146)
                      .++|++.+.||+|+||.|      ..|..||+|++.....  .....+.+|+.++..++|+|++++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            467999999999999998      4578899999975432  2345688999999999999999999988643     23


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+++++++.+|+|.+++..    ..+++..+..++.||+.||.|.
T Consensus        97 ~~~i~~~~~gg~L~~~~~~----~~l~e~~~~~i~~qil~aL~~L  137 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYI  137 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeecCCchhhhccc----ccccHHHHHHHHHHHHHHHHHH
Confidence            4667788899999999853    2489999999999999999873

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.7e-16  Score=109.43  Aligned_cols=105  Identities=19%  Similarity=0.268  Sum_probs=83.9

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEc------CCc
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLE------REE   97 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~------~~~   97 (146)
                      .+|++.+.||+|+||.|      ..|..+|+|++.....  .....+.+|+.++..++||||+++++++..      ...
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            67999999999999998      4578999999975432  234568899999999999999999999864      357


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ++++|||+.++.+ +.+.     ..+++..+..++.|++.||.|.
T Consensus        97 ~~iv~Ey~~~~l~-~~~~-----~~~~~~~i~~~~~qil~gl~~L  135 (355)
T d2b1pa1          97 VYLVMELMDANLC-QVIQ-----MELDHERMSYLLYQMLCGIKHL  135 (355)
T ss_dssp             EEEEEECCSEEHH-HHHT-----SCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeccchHHH-Hhhh-----cCCCHHHHHHHHHHHHHHHHHh
Confidence            8999999987544 4442     2378999999999999999873

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.5e-16  Score=109.31  Aligned_cols=108  Identities=17%  Similarity=0.249  Sum_probs=82.9

Q ss_pred             HccCcccceeecccCceee------cCCcEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCCeeeEeeEEEcCC-----
Q 048150           30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSS--QGAQEINNEVVVVAKLQHINLVRLLGFCLERE-----   96 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~~~-----   96 (146)
                      ..++|...+.||+|+||.|      ..|..+|+|.+.....  ...+.+.+|+.+|..++|||++++++++...+     
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~   95 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF   95 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence            3578999999999999999      4578899999965322  23567889999999999999999999987654     


Q ss_pred             -ceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 -EKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                       .++++|||+ +++|..++..    ..+++..+..++.|++.||.|.
T Consensus        96 ~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~~~~qi~~aL~~L  137 (346)
T d1cm8a_          96 TDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYI  137 (346)
T ss_dssp             CCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEecc-cccHHHHHHh----ccccHHHHHHHHHHHHHHHHHH
Confidence             479999999 4577777643    3489999999999999999873

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=4.6e-17  Score=110.96  Aligned_cols=107  Identities=17%  Similarity=0.204  Sum_probs=90.4

Q ss_pred             cCcccceeecccCceeec---------CCcEEEEEEeccCC----cccHHHHHHHHHHHhhCCC-CCeeeEeeEEEcCCc
Q 048150           32 NKFSTDNKLGEGGFGVLP---------NEHEIAVKRLSRSS----SQGAQEINNEVVVVAKLQH-INLVRLLGFCLEREE   97 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v~---------~~~~~a~k~~~~~~----~~~~~~~~~e~~~l~~l~h-~~i~~l~~~~~~~~~   97 (146)
                      ++|.+.+.||+|+||.|+         .|..+|+|.+....    ....+.+.+|+.++.+++| |||+++++.+.+.+.
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            669999999999999982         36789999986431    2235668899999999965 899999999999999


Q ss_pred             eeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150           98 KILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus        98 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +++++||+.+|+|.+.+...   ..+++..+..++.|++.||.|
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~---~~~~e~~~~~~~~Qi~~al~~  144 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEH  144 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHH
T ss_pred             eeeeeecccccHHHHHHHhc---ccccHHHHHHHHHHHHHHHHH
Confidence            99999999999999998652   346788899999999999987

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=6.4e-17  Score=107.89  Aligned_cols=109  Identities=19%  Similarity=0.334  Sum_probs=88.9

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcc------cHHHHHHHHHHHhhCC--CCCeeeEeeEEEcCC
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ------GAQEINNEVVVVAKLQ--HINLVRLLGFCLERE   96 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~------~~~~~~~e~~~l~~l~--h~~i~~l~~~~~~~~   96 (146)
                      .++|.+.+.||+|+||.|      ..|..+|+|.+......      ....+.+|+.++..++  ||||+++++++...+
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            467999999999999999      45789999998643111      1233568999999885  899999999999999


Q ss_pred             ceeEEEEecCC-CCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           97 EKILVYEYVPN-KRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        97 ~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      ..+++|||+.+ +++.+++..   ...+++..+..++.|++.||.|.
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~---~~~l~e~~~~~~~~qi~~al~~l  126 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHC  126 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEEeccCcchHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999976 677777754   34589999999999999999863

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.4e-15  Score=103.23  Aligned_cols=109  Identities=17%  Similarity=0.246  Sum_probs=86.0

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCCeeeEeeEEEc--------
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLE--------   94 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~l~~~~~~--------   94 (146)
                      .++|++.+.||+|+||.|      ..|..||+|++...  .......+.+|+.+|..++|+|++++.+.+..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            578999999999999999      45788999998643  22335678899999999999999999988854        


Q ss_pred             CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           95 REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        95 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .+.+++++|++.++.+.....   ....++...+..++.|++.||.|.
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~---~~~~~~~~~~~~i~~qil~~l~~l  133 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYI  133 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTC---TTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEeccCCCccchhhh---cccccccHHHHHHHHHHHHHHHHh
Confidence            345899999999876655443   234578889999999999999873

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=6.9e-16  Score=104.18  Aligned_cols=111  Identities=21%  Similarity=0.234  Sum_probs=83.3

Q ss_pred             HccCcccceeecccCceee------c-CCcEEEEEEeccC--CcccHHHHHHHHHHHhhC---CCCCeeeEeeEEEc---
Q 048150           30 ATNKFSTDNKLGEGGFGVL------P-NEHEIAVKRLSRS--SSQGAQEINNEVVVVAKL---QHINLVRLLGFCLE---   94 (146)
Q Consensus        30 ~~~~~~~~~~lg~g~fg~v------~-~~~~~a~k~~~~~--~~~~~~~~~~e~~~l~~l---~h~~i~~l~~~~~~---   94 (146)
                      ..++|++.+.||+|+||.|      . .+..||+|.+...  .......+.+|+.++..+   +||||+++++++..   
T Consensus         5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~   84 (305)
T d1blxa_           5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   84 (305)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence            4578999999999999999      1 2456899998643  222233455677766654   79999999998853   


Q ss_pred             --CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           95 --REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        95 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                        ...+++++|++.++.+......  ....+++..+..++.|++.||.|.
T Consensus        85 ~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~yL  132 (305)
T d1blxa_          85 DRETKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFL  132 (305)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCceEEEEEEeccCCchhhhhhc--cCCCCCHHHHHHHHHHHHHHHHHH
Confidence              2458999999998776554433  344588999999999999999873

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.59  E-value=6e-15  Score=99.11  Aligned_cols=106  Identities=19%  Similarity=0.262  Sum_probs=87.3

Q ss_pred             ccCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCC-CCeeeEeeEEEcCCceeEEEE
Q 048150           31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQH-INLVRLLGFCLEREEKILVYE  103 (146)
Q Consensus        31 ~~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~l~~~~~~~~~~~lv~e  103 (146)
                      ..+|.+.+.||+|+||.|      ..|..+|+|.+....  ....+..|++.+..++| ++++.+.+++......+++||
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme   81 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   81 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence            467999999999999998      456789999885432  23346678888888865 899999999999999999999


Q ss_pred             ecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          104 YVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       104 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      |+ +++|.+++...  ...+++..+..++.|++.||.|
T Consensus        82 ~~-~~~l~~~~~~~--~~~~~~~~~~~i~~q~~~~l~~  116 (293)
T d1csna_          82 LL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQS  116 (293)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHH
T ss_pred             ec-CCCHHHHHHhh--ccchhhHHHHHHHHHHHHHHHH
Confidence            98 57999988653  3358899999999999999986

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.52  E-value=7.7e-14  Score=93.78  Aligned_cols=105  Identities=14%  Similarity=0.183  Sum_probs=81.6

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCCCCC-eeeEeeEEEcCCceeEEEEe
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHIN-LVRLLGFCLEREEKILVYEY  104 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~l~~~~~~~~~~~lv~e~  104 (146)
                      ++|++.+.||+|+||.|      ..|..||+|.+....  ....+..|+.++..++|++ ++.+..++...+..+++|||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            56999999999999999      346789999986432  2234678999999997765 45556666777888999999


Q ss_pred             cCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhh
Q 048150          105 VPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSR  141 (146)
Q Consensus       105 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  141 (146)
                      +.+ ++.+.+..  ....+++..+..++.|++.||.|
T Consensus        85 ~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~  118 (299)
T d1ckia_          85 LGP-SLEDLFNF--CSRKFSLKTVLLLADQMISRIEY  118 (299)
T ss_dssp             CCC-BHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHH
T ss_pred             cCC-chhhhhhh--ccCCCcHHHHHHHHHHHHHHHHH
Confidence            855 66666543  23458999999999999999987

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.16  E-value=6.6e-11  Score=81.04  Aligned_cols=110  Identities=13%  Similarity=0.068  Sum_probs=79.6

Q ss_pred             cCcccceeecccCceee------cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC-----------CCCeeeEeeEEEc
Q 048150           32 NKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ-----------HINLVRLLGFCLE   94 (146)
Q Consensus        32 ~~~~~~~~lg~g~fg~v------~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~i~~l~~~~~~   94 (146)
                      .+|++++.||+|+||.|      ..|..||+|++.... .....+.+|+.++..+.           |+|++++++++..
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~   91 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   91 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence            35999999999999999      457889999996432 23456677888777654           5789998888754


Q ss_pred             --CCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           95 --REEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        95 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                        ....++++.++..+..............+++..+..++.|++.||.|.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~l  141 (362)
T d1q8ya_          92 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYM  141 (362)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHH
Confidence              345667777765554333333223455688899999999999999763

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.86  E-value=9.3e-09  Score=64.27  Aligned_cols=94  Identities=15%  Similarity=0.172  Sum_probs=64.7

Q ss_pred             ccceeecccCceee-----cCCcEEEEEEeccCCcc------------------cHHHHHHHHHHHhhCCCCCeeeEeeE
Q 048150           35 STDNKLGEGGFGVL-----PNEHEIAVKRLSRSSSQ------------------GAQEINNEVVVVAKLQHINLVRLLGF   91 (146)
Q Consensus        35 ~~~~~lg~g~fg~v-----~~~~~~a~k~~~~~~~~------------------~~~~~~~e~~~l~~l~h~~i~~l~~~   91 (146)
                      .+.+.||+|+||.|     ..|..+|+|.++.....                  .......|...+..+.|.+++..++.
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            46789999999999     46778999987532110                  01234467788888999988887654


Q ss_pred             EEcCCceeEEEEecCCCCHHHhhcCCCCCCCCChHHHHHHHHHHHHHHhhh
Q 048150           92 CLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN  142 (146)
Q Consensus        92 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~~  142 (146)
                      .    ..+++|||+++..+.+          ++......++.|+++++.|.
T Consensus        83 ~----~~~lvme~~~~~~~~~----------l~~~~~~~i~~ql~~~l~~l  119 (191)
T d1zara2          83 E----GNAVLMELIDAKELYR----------VRVENPDEVLDMILEEVAKF  119 (191)
T ss_dssp             E----TTEEEEECCCCEEGGG----------CCCSCHHHHHHHHHHHHHHH
T ss_pred             c----CCEEEEEeeccccccc----------hhhHHHHHHHHHHHHHHHHH
Confidence            2    2369999999865533          23334567888888888763

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.44  E-value=0.013  Score=36.97  Aligned_cols=88  Identities=8%  Similarity=0.035  Sum_probs=54.6

Q ss_pred             HHHHccCcccceeecccCceee----cCCcEEEEEEeccCCcccHHHHHHHHHHHhhCC-CCCeeeEeeEEEcCCceeEE
Q 048150           27 IEDATNKFSTDNKLGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ-HINLVRLLGFCLEREEKILV  101 (146)
Q Consensus        27 ~~~~~~~~~~~~~lg~g~fg~v----~~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~l~~~~~~~~~~~lv  101 (146)
                      +....+.|+.....+.++-+.|    ..+..+.+|............+..|...+..+. +-.+++++.....++..+++
T Consensus         9 l~~~~~~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv   88 (263)
T d1j7la_           9 LKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL   88 (263)
T ss_dssp             HHHHHTTSEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             HHHhhhceEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEE
Confidence            3334455665554433332333    455667788875433223344667777766553 44456777777778889999


Q ss_pred             EEecCCCCHHHhh
Q 048150          102 YEYVPNKRLDNFL  114 (146)
Q Consensus       102 ~e~~~~g~L~~~l  114 (146)
                      |+++++.++.+..
T Consensus        89 ~~~l~G~~~~~~~  101 (263)
T d1j7la_          89 MSEADGVLCSEEY  101 (263)
T ss_dssp             EECCSSEEHHHHT
T ss_pred             EEecccccccccc
Confidence            9999998887655

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=80.17  E-value=4.4  Score=24.51  Aligned_cols=59  Identities=19%  Similarity=0.191  Sum_probs=38.3

Q ss_pred             CCcEEEEEEeccCCcccHHHHHHHHHHHhhCC--CCCeeeEeeEEEcCCceeEEEEecCCCCHH
Q 048150           50 NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ--HINLVRLLGFCLEREEKILVYEYVPNKRLD  111 (146)
Q Consensus        50 ~~~~~a~k~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~l~~~~~~~~~~~lv~e~~~~g~L~  111 (146)
                      .+..+.+|......   ...+..|...+..+.  ...+++++.....++..+++|+++++.++.
T Consensus        34 ~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          34 GRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             TSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             CCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence            45557778765432   223556666666542  334566777777778889999999986653