Citrus Sinensis ID: 048170

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140--
Protein Sequence
EVEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTVHVNIC
Secondary Structure (PSIPRED)
ccccccccHHHHccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccccccccccHHHHHcccccccccHHHHcccccHHHHHHHHHHHcccccccccHHHHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEHccHHHHccccEccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccccccccccccccccccccccccHHHHcccccHHHHHHHHHHHcccHHHcccHHHHHccccHcccccccccccccHEcccc
Coil and Loop (DISEMBL)
evefpykapesricssvymtphdvWAVGCIFAemvsgkplfpcgkkdhLSLIVRLfgnptketwpgaNYISELlhslpqcepadlaekthglepsGVELLSQmlcldpdhrvtandalcigtSEKLLAHAHLYVKTVHVNIC
Flexible Loop (DISEMBL)
evefpykapesricssvYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTVHVNIC
Low Complexity Region (SEG)
EVEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTVHVNIC
Disordered region (IsUnstruct)
***********RICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEPADL******LEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTVHVNI*
Disordered Region (DISOPRED)
EVEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVK*VHVNIC
Disordered Region (DISEMBL)
*********ESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTVHVNIC
Disordered Region (DISPRO)
EVEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTV****C
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
EVEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTVHVNIC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	142	2.2.26 [Sep-21-2011]
P93101	294	Cell division control pro	N/A	no	0.795	0.384	0.491	6e-26
Q41639	294	Cell division control pro	N/A	no	0.795	0.384	0.482	4e-25
P29618	294	Cyclin-dependent kinase A	yes	no	0.795	0.384	0.447	1e-23
P24100	294	Cyclin-dependent kinase A	yes	no	0.795	0.384	0.456	1e-23
P23111	294	Cell division control pro	N/A	no	0.795	0.384	0.447	1e-23
Q05006	294	Cell division control pro	N/A	no	0.795	0.384	0.464	1e-23
P24923	291	Cell division control pro	N/A	no	0.795	0.388	0.456	2e-23
Q38772	294	Cell division control pro	N/A	no	0.795	0.384	0.464	2e-23
Q38773	280	Cell division control pro	N/A	no	0.795	0.403	0.464	1e-22
P43063	317	Cyclin-dependent kinase 1	N/A	no	0.802	0.359	0.426	3e-22

>sp|P93101|CDC2_CHERU Cell division control protein 2 homolog OS=Chenopodium rubrum GN=CDC2 PE=2 SV=1

 Score =  115 bits (289), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP DVW+VGCIFAEMV+ KPLFP   + D L  I R  G P +ETW
Sbjct: 169 YRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRTLGTPNEETW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   S P+    DL+     L+P+G++LL++MLCLDP  R+TA +AL
Sbjct: 229 PGVTSLPDFKSSFPKWISKDLSAVVPNLDPAGIDLLNKMLCLDPSKRITARNAL 282

Plays a key role in the control of the eukaryotic cell cycle. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.
Chenopodium rubrum (taxid: 3560)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 3

>sp|Q41639|CDC2_VIGAC Cell division control protein 2 homolog OS=Vigna aconitifolia GN=CDC2 PE=2 SV=1

 Score =  113 bits (282), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 55/114 (48%), Positives = 72/114 (63%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP DVW+VGCIFAEMV+ +PLFP   + D L  I R+ G P +ETW
Sbjct: 169 YRAPEILLGSRHYSTPVDVWSVGCIFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEETW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+  P DLA     L+ +G+ LLS MLCLDP  R+TA  A+
Sbjct: 229 PGVTALPDFKSTFPKWPPKDLATVVPNLDAAGLNLLSSMLCLDPSKRITARIAV 282

Plays a key role in the control of the eukaryotic cell cycle. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Vigna aconitifolia (taxid: 3918)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P29618|CDKA1_ORYSJ Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/114 (44%), Positives = 75/114 (65%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP D+W+VGCIFAEMV+ KPLFP   + D L  I R+ G P +++W
Sbjct: 169 YRAPEILLGSRQYSTPVDMWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRVLGTPNEQSW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG + + +   + P+ +  DLA     L+P+G++LLS+ML  +P+ R+TA  AL
Sbjct: 229 PGVSSLPDYKSAFPKWQAQDLATIVPTLDPAGLDLLSKMLRYEPNKRITARQAL 282

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P24100|CDKA1_ARATH Cyclin-dependent kinase A-1 OS=Arabidopsis thaliana GN=CDKA-1 PE=1 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 71/114 (62%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP D+W+VGCIFAEM+S KPLFP   + D L  I R+ G P ++TW
Sbjct: 169 YRAPEILLGSHHYSTPVDIWSVGCIFAEMISQKPLFPGDSEIDQLFKIFRIMGTPYEDTW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
            G   + +   + P+ +P DL      L+P GV+LLS+ML +DP  R+ A  AL
Sbjct: 229 RGVTSLPDYKSAFPKWKPTDLETFVPNLDPDGVDLLSKMLLMDPTKRINARAAL 282

Involved in the control of the cell cycle. Essential for both G1/S and G2/M (mitosis) phase transitions. Functions in cell morphogenesis as well as cell proliferation. Required for cell division (entry into mitosis) of the generative cell in male gametogenesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P23111|CDC2_MAIZE Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/114 (44%), Positives = 74/114 (64%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + +  Y TP DVW+VGCIFAEMV+ KPLFP   + D L  I R+ G P +++W
Sbjct: 169 YRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQSW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG + + +   + P+ +  DLA     L+P+G++LLS+ML  +P  R+TA  AL
Sbjct: 229 PGVSCLPDFKTAFPRWQAQDLATVVPNLDPAGLDLLSKMLRYEPSKRITARQAL 282

Plays a key role in the control of the eukaryotic cell cycle. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Zea mays (taxid: 4577)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q05006|CDC22_MEDSA Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP DVW+VGCIFAEM++ +PLFP   + D L  I R+ G P +ETW
Sbjct: 169 YRAPEILLGSRHYSTPVDVWSVGCIFAEMINQRPLFPGDSEIDELFKIFRITGTPNEETW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+    DLA +   LEP+G++LLS    LDP  R+TA  AL
Sbjct: 229 PGVTSLPDFKSAFPKWPAKDLATQVPNLEPAGLDLLSSTCRLDPTRRITARGAL 282

Plays a key role in the control of the eukaryotic cell cycle. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Medicago sativa (taxid: 3879)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|P24923|CDC21_MEDSA Cell division control protein 2 homolog 1 (Fragment) OS=Medicago sativa GN=CDC2A PE=2 SV=1

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 71/114 (62%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP DVW+VGCIFAEM + +PL P   + D L  I R+ G P ++TW
Sbjct: 166 YRAPEILLGSRHYSTPVDVWSVGCIFAEMANRRPLSPGDSEIDELFKIFRILGTPNEDTW 225

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+    DLA     LEP+G++LL+ MLCLDP  R+TA  A+
Sbjct: 226 PGVTSLPDFKSTFPRWPSKDLATVVPNLEPAGLDLLNSMLCLDPTKRITARSAV 279

Plays a key role in the control of the eukaryotic cell cycle. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Medicago sativa (taxid: 3879)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q38772|CDC2A_ANTMA Cell division control protein 2 homolog A OS=Antirrhinum majus GN=CDC2A PE=2 SV=2

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 72/114 (63%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP DVW+VGCIFAEMV+ +PLFP   + D L  I R+ G P +ETW
Sbjct: 169 YRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVMGTPNEETW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+    +LA     L+ SG++LL +ML LDP  R+TA +AL
Sbjct: 229 PGVTSLPDFKSAFPKWPAKELAAVVPNLDASGLDLLDKMLRLDPSKRITARNAL 282

Plays a key role in the control of the eukaryotic cell cycle.

Antirrhinum majus (taxid: 4151)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q38773|CDC2B_ANTMA Cell division control protein 2 homolog B (Fragment) OS=Antirrhinum majus GN=CDC2B PE=2 SV=1

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP DVW+VGCIFAEMV+ KPLFP   + D L  I R+ G P ++ W
Sbjct: 156 YRAPEVLLGSRHYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELHKIFRIIGTPNEDIW 215

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   S P+  P +LA     L  +G++LL +ML LDP  R+TA  AL
Sbjct: 216 PGVTSLPDFKSSFPKWPPKELATIVPNLGATGLDLLCKMLQLDPSKRITAKKAL 269

Plays a key role in the control of the eukaryotic cell cycle.

Antirrhinum majus (taxid: 4151)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P43063|CDK1_CANAL Cyclin-dependent kinase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CDC28 PE=2 SV=1

 Score =  103 bits (258), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 1/115 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W+VGCIFAEM + KPLFP   + D +  I R+ G P +E W
Sbjct: 174 YRAPEILLGGKQYSTGVDMWSVGCIFAEMCNRKPLFPGDSEIDEIFRIFRILGTPNEEIW 233

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           P  NY+ +   S PQ +   L+E    L+ +G++LL QML  DP  R++A  AL 
Sbjct: 234 PDVNYLPDFKSSFPQWKKKPLSEAVPSLDANGIDLLDQMLVYDPSRRISAKRALI 288

This protein is essential for the completion of the start, the controlling event, in the cell cycle.

Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
86611379	294	cyclin-dependent kinase type A [Prunus d	0.795	0.384	0.517	2e-25
449465537	294	PREDICTED: cell division control protein	0.795	0.384	0.5	4e-25
374349346	294	cyclin-dependent kinase A [Persea americ	0.795	0.384	0.5	4e-25
8671339	294	cdc2Pnc [Pinus contorta]	0.795	0.384	0.491	5e-25
454980	294	cdc2Pa [Picea abies] gi|116778762|gb|ABK	0.795	0.384	0.5	6e-25
120561160	206	cdc2 protein [Larix x marschlinsii]	0.795	0.548	0.5	1e-24
359489125	294	PREDICTED: cell division control protein	0.795	0.384	0.491	2e-24
358348197	294	Cyclin-dependent kinase A [Medicago trun	0.795	0.384	0.491	2e-24
302753412	308	hypothetical protein SELMODRAFT_139306 [	0.795	0.366	0.5	2e-24
413926678	292	putative cyclin-dependent kinase A famil	0.795	0.386	0.517	3e-24

>gi|86611379|gb|ABD14373.1| cyclin-dependent kinase type A [Prunus dulcis]

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/114 (51%), Positives = 75/114 (65%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP DVW+VGCIFAEMV+ +PLFP   + D L  I R+ G PT++TW
Sbjct: 169 YRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRIMGTPTEDTW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG N + +   S P+    DLA     LE +GV+LLS+MLCLDP  R+TA  AL
Sbjct: 229 PGVNSLPDFKSSFPKWLAKDLATAVPNLESAGVDLLSKMLCLDPSKRITARTAL 282

Source: Prunus dulcis

Species: Prunus dulcis

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465537|ref|XP_004150484.1| PREDICTED: cell division control protein 2 homolog A-like [Cucumis sativus]

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP DVW+VGCIFAEMV+ +PLFP   + D L  I R+ G P ++TW
Sbjct: 169 YRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+  P DLA     LE +G++LLS+MLCLDP  RVTA +AL
Sbjct: 229 PGVTSLPDFKSTFPKWSPKDLASVVPNLEAAGIDLLSKMLCLDPTKRVTARNAL 282

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|374349346|gb|AEZ35253.1| cyclin-dependent kinase A [Persea americana]

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP DVW+VGCIFAEMV+ KPLFP   + D L  I R+ G P +ETW
Sbjct: 169 YRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG + + +   + P+  P DL     GLEP+G++LL +MLCL+P  R+TA  AL
Sbjct: 229 PGVSSLPDFKSAFPKWPPKDLTTVVPGLEPAGIDLLCKMLCLEPSRRITAKSAL 282

Source: Persea americana

Species: Persea americana

Genus: Persea

Family: Lauraceae

Order: Laurales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8671339|emb|CAA56815.2| cdc2Pnc [Pinus contorta]

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/114 (49%), Positives = 75/114 (65%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP DVW+VGCIFAEMV+ +PLFP   + D L  I R+ G P +ETW
Sbjct: 169 YRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEETW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+    DLA    GLEP+G+++LS+MLCL+P  R+TA  AL
Sbjct: 229 PGVTSLPDFKSAFPKWPAKDLATVVSGLEPAGIDILSKMLCLEPSRRITARSAL 282

Source: Pinus contorta

Species: Pinus contorta

Genus: Pinus

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|454980|emb|CAA54746.1| cdc2Pa [Picea abies] gi|116778762|gb|ABK20983.1| unknown [Picea sitchensis]

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP DVW+VGCIFAEMV+ +PLFP   + D L  I R+ G P +ETW
Sbjct: 169 YRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEETW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+    DLA    GLEP+G++LLS+MLCL+P  R+TA  AL
Sbjct: 229 PGVTSLPDFKSAFPKWPAKDLATVVPGLEPAGIDLLSKMLCLEPSKRITARSAL 282

Source: Picea abies

Species: Picea abies

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|120561160|gb|ABM26975.1| cdc2 protein [Larix x marschlinsii]

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP DVW+VGCIFAEMV+ +PLFP   + D L  I R+ G P +ETW
Sbjct: 85  YRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEETW 144

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+    DLA    GLEP+G++LLS+MLCL+P  R+TA  AL
Sbjct: 145 PGVTSLPDFKSAFPKWPAKDLATVVPGLEPAGIDLLSKMLCLEPSKRITARSAL 198

Source: Larix x marschlinsii

Species: Larix x marschlinsii

Genus: Larix

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489125|ref|XP_002266125.2| PREDICTED: cell division control protein 2 homolog [Vitis vinifera] gi|297744790|emb|CBI38058.3| unnamed protein product [Vitis vinifera]

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP DVW+VGCIFAEMV+ +PLFP   + D L  I R+ G P ++TW
Sbjct: 169 YRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+  P DLA     LE +G++LLS+MLCLDP  R+TA  AL
Sbjct: 229 PGVTSLPDFKSAFPKWPPKDLATVVPNLESAGIDLLSKMLCLDPSRRITARSAL 282

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358348197|ref|XP_003638135.1| Cyclin-dependent kinase A [Medicago truncatula] gi|355504070|gb|AES85273.1| Cyclin-dependent kinase A [Medicago truncatula]

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP DVW+VGCIFAEM++ +PLFP   + D L  I R+ G P +ETW
Sbjct: 169 YRAPEILLGSRHYSTPVDVWSVGCIFAEMINQRPLFPGDSEIDELFKIFRITGTPNEETW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+    DLA +   LEP+G++LLS MLCLDP  R+TA  AL
Sbjct: 229 PGVTSLPDFKSAFPKWPAKDLATQVPNLEPAGLDLLSNMLCLDPTRRITARGAL 282

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302753412|ref|XP_002960130.1| hypothetical protein SELMODRAFT_139306 [Selaginella moellendorffii] gi|302804516|ref|XP_002984010.1| hypothetical protein SELMODRAFT_271676 [Selaginella moellendorffii] gi|300148362|gb|EFJ15022.1| hypothetical protein SELMODRAFT_271676 [Selaginella moellendorffii] gi|300171069|gb|EFJ37669.1| hypothetical protein SELMODRAFT_139306 [Selaginella moellendorffii]

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP D+W+VGCIFAEM++ +PLFP   + D L  I R+ G P +ETW
Sbjct: 169 YRAPEILLGSRHYSTPVDMWSVGCIFAEMINQRPLFPGDSEIDELFKIFRILGTPNEETW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+  P DLA    GLE +GV+LLS+MLCLDP  R+TA  AL
Sbjct: 229 PGVTSLPDFKSAFPKWLPKDLATLVPGLEHAGVDLLSKMLCLDPSSRITARAAL 282

Source: Selaginella moellendorffii

Species: Selaginella moellendorffii

Genus: Selaginella

Family: Selaginellaceae

Order: Selaginellales

Class: Isoetopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413926678|gb|AFW66610.1| putative cyclin-dependent kinase A family protein [Zea mays]

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/114 (51%), Positives = 74/114 (64%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + +  Y TP DVW+VGCIFAEMV+ K LFP   + D L  I R+ G PTKETW
Sbjct: 168 YRAPEILLGARHYSTPVDVWSVGCIFAEMVNQKALFPGDSEIDELFKIFRILGTPTKETW 227

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+  P DLA     LEPSG++LLS+ML LDP  R+TA  AL
Sbjct: 228 PGVASLPDYKSTFPKWPPVDLATVVPTLEPSGIDLLSKMLRLDPSKRITARAAL 281

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
TAIR|locus:2099478	294	CDC2 "cell division control 2"	0.795	0.384	0.456	1e-22
UNIPROTKB|P29618	294	CDKA-1 "Cyclin-dependent kinas	0.795	0.384	0.447	2.1e-22
DICTYBASE|DDB_G0288677	292	cdk5 "cyclin-dependent kinase	0.788	0.383	0.452	1.5e-21
CGD|CAL0002090	317	CDC28 [Candida albicans (taxid	0.795	0.356	0.429	1.9e-21
UNIPROTKB|P43063	317	CDC28 "Cyclin-dependent kinase	0.795	0.356	0.429	1.9e-21
UNIPROTKB|Q00526	305	CDK3 "Cyclin-dependent kinase	0.795	0.370	0.438	1e-20
GENEDB_PFALCIPARUM|MAL13P1.279	288	PfPK5 "P. falciparum Protein K	0.795	0.392	0.429	2.1e-20
UNIPROTKB|P61075	288	CRK2 "Cell division control pr	0.795	0.392	0.429	2.1e-20
POMBASE|SPCC16C4.11	288	pef1 "Pho85/PhoA-like cyclin-d	0.795	0.392	0.429	3.5e-20
TAIR|locus:2064087	311	CDKB1;2 "cyclin-dependent kina	0.781	0.356	0.434	4.4e-20

TAIR|locus:2099478 CDC2 "cell division control 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 52/114 (45%), Positives = 71/114 (62%)

Query:     6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
             Y+APE  + S  Y TP D+W+VGCIFAEM+S KPLFP   + D L  I R+ G P ++TW
Sbjct:   169 YRAPEILLGSHHYSTPVDIWSVGCIFAEMISQKPLFPGDSEIDQLFKIFRIMGTPYEDTW 228

Query:    65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
              G   + +   + P+ +P DL      L+P GV+LLS+ML +DP  R+ A  AL
Sbjct:   229 RGVTSLPDYKSAFPKWKPTDLETFVPNLDPDGVDLLSKMLLMDPTKRINARAAL 282

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS;IMP

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0042023 "DNA endoreduplication" evidence=RCA;IMP

GO:0009555 "pollen development" evidence=IMP

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0040020 "regulation of meiosis" evidence=IMP

GO:0048229 "gametophyte development" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0010048 "vernalization response" evidence=RCA

GO:0010440 "stomatal lineage progression" evidence=RCA

GO:0045736 "negative regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=RCA

GO:0008356 "asymmetric cell division" evidence=IGI

GO:0000910 "cytokinesis" evidence=IMP

GO:0009409 "response to cold" evidence=IEP

GO:0009574 "preprophase band" evidence=TAS

GO:0010005 "cortical microtubule, transverse to long axis" evidence=IDA

UNIPROTKB|P29618 CDKA-1 "Cyclin-dependent kinase A-1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 51/114 (44%), Positives = 75/114 (65%)

Query:     6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
             Y+APE  + S  Y TP D+W+VGCIFAEMV+ KPLFP   + D L  I R+ G P +++W
Sbjct:   169 YRAPEILLGSRQYSTPVDMWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRVLGTPNEQSW 228

Query:    65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
             PG + + +   + P+ +  DLA     L+P+G++LLS+ML  +P+ R+TA  AL
Sbjct:   229 PGVSSLPDYKSAFPKWQAQDLATIVPTLDPAGLDLLSKMLRYEPNKRITARQAL 282

GO:0005515 "protein binding" evidence=IPI

DICTYBASE|DDB_G0288677 cdk5 "cyclin-dependent kinase 5" [Dictyostelium discoideum (taxid:44689)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 52/115 (45%), Positives = 69/115 (60%)

Query:     6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
             Y+AP+  + S  Y TP D+W+ GCIFAEM SG+PLFP  G  D L  I ++ G P +E+W
Sbjct:   167 YRAPDVLMGSRKYSTPIDIWSAGCIFAEMASGRPLFPGSGTSDQLFRIFKILGTPNEESW 226

Query:    65 PGANYISELLHSLPQCEPA-DLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
             P    + E     P   PA  L+   HGL+  G+ LLS+ML  DP+ R+TA  AL
Sbjct:   227 PSITELPEYKTDFP-VHPAHQLSSIVHGLDEKGLNLLSKMLQYDPNQRITAAAAL 280

GO:0031157 "regulation of aggregate size involved in sorocarp development" evidence=IMP

GO:0031152 "aggregation involved in sorocarp development" evidence=IMP

GO:0030435 "sporulation resulting in formation of a cellular spore" evidence=IMP

GO:0008283 "cell proliferation" evidence=IMP

GO:0006909 "phagocytosis" evidence=IMP

GO:0006907 "pinocytosis" evidence=IMP

GO:0007049 "cell cycle" evidence=IEA;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0005622 "intracellular" evidence=IDA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0072686 "mitotic spindle" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005654 "nucleoplasm" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IPI

GO:0044351 "macropinocytosis" evidence=RCA

CGD|CAL0002090 CDC28 [Candida albicans (taxid:5476)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 49/114 (42%), Positives = 68/114 (59%)

Query:     6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
             Y+APE  +    Y T  D+W+VGCIFAEM + KPLFP   + D +  I R+ G P +E W
Sbjct:   174 YRAPEILLGGKQYSTGVDMWSVGCIFAEMCNRKPLFPGDSEIDEIFRIFRILGTPNEEIW 233

Query:    65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
             P  NY+ +   S PQ +   L+E    L+ +G++LL QML  DP  R++A  AL
Sbjct:   234 PDVNYLPDFKSSFPQWKKKPLSEAVPSLDANGIDLLDQMLVYDPSRRISAKRAL 287

GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IGI;ISS

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IGI;IDA

GO:0006468 "protein phosphorylation" evidence=IGI;ISS;IDA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IGI;ISS;IDA

GO:0051726 "regulation of cell cycle" evidence=IGI

GO:0030448 "hyphal growth" evidence=IMP

GO:0005840 "ribosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005816 "spindle pole body" evidence=IEA

GO:0005935 "cellular bud neck" evidence=IEA

GO:0000307 "cyclin-dependent protein kinase holoenzyme complex" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0000235 "astral microtubule" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0010898 "positive regulation of triglyceride catabolic process" evidence=IEA

GO:0006338 "chromatin remodeling" evidence=IEA

GO:0045930 "negative regulation of mitotic cell cycle" evidence=IEA

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IEA

GO:0051446 "positive regulation of meiotic cell cycle" evidence=IEA

GO:0010569 "regulation of double-strand break repair via homologous recombination" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0010696 "positive regulation of spindle pole body separation" evidence=IEA

GO:0051447 "negative regulation of meiotic cell cycle" evidence=IEA

GO:0010571 "positive regulation of DNA replication involved in S phase" evidence=IEA

GO:0010568 "regulation of budding cell apical bud growth" evidence=IEA

GO:0070317 "negative regulation of G0 to G1 transition" evidence=IEA

GO:0010570 "regulation of filamentous growth" evidence=IEA

GO:0042393 "histone binding" evidence=IEA

UNIPROTKB|P43063 CDC28 "Cyclin-dependent kinase 1" [Candida albicans SC5314 (taxid:237561)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 49/114 (42%), Positives = 68/114 (59%)

Query:     6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
             Y+APE  +    Y T  D+W+VGCIFAEM + KPLFP   + D +  I R+ G P +E W
Sbjct:   174 YRAPEILLGGKQYSTGVDMWSVGCIFAEMCNRKPLFPGDSEIDEIFRIFRILGTPNEEIW 233

Query:    65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
             P  NY+ +   S PQ +   L+E    L+ +G++LL QML  DP  R++A  AL
Sbjct:   234 PDVNYLPDFKSSFPQWKKKPLSEAVPSLDANGIDLLDQMLVYDPSRRISAKRAL 287

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IGI;IDA

GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IGI;ISS

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IGI;ISS;IDA

GO:0006468 "protein phosphorylation" evidence=IGI;ISS;IDA

GO:0030448 "hyphal growth" evidence=IMP

GO:0051726 "regulation of cell cycle" evidence=IGI

UNIPROTKB|Q00526 CDK3 "Cyclin-dependent kinase 3" [Homo sapiens (taxid:9606)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 50/114 (43%), Positives = 67/114 (58%)

Query:     6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
             Y+APE  + S  Y T  D+W++GCIFAEMV+ K LFP   + D L  I R+ G P+++TW
Sbjct:   168 YRAPEILLGSKFYTTAVDIWSIGCIFAEMVTRKALFPGDSEIDQLFRIFRMLGTPSEDTW 227

Query:    65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
             PG   + +   S P+     L E    LEP G +LL Q+L  DP  R+TA  AL
Sbjct:   228 PGVTQLPDYKGSFPKWTRKGLEEIVPNLEPEGRDLLMQLLQYDPSQRITAKTAL 281

GO:0005524 "ATP binding" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IEA

GO:0045023 "G0 to G1 transition" evidence=TAS

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS

GO:0008283 "cell proliferation" evidence=TAS

GENEDB_PFALCIPARUM|MAL13P1.279 PfPK5 "P. falciparum Protein Kinase 5" [Plasmodium falciparum (taxid:5833)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 49/114 (42%), Positives = 67/114 (58%)

Query:     6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
             Y+AP+  + S  Y T  D+W+VGCIFAEMV+G PLFP   + D L  I R+ G P  + W
Sbjct:   166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW 225

Query:    65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
             P    + +   +    EP        GL+ SG++LLS+ML LDP+ R+TA  AL
Sbjct:   226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

GO:0007049 "cell cycle" evidence=ISS

UNIPROTKB|P61075 CRK2 "Cell division control protein 2 homolog" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 49/114 (42%), Positives = 67/114 (58%)

Query:     6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
             Y+AP+  + S  Y T  D+W+VGCIFAEMV+G PLFP   + D L  I R+ G P  + W
Sbjct:   166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW 225

Query:    65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
             P    + +   +    EP        GL+ SG++LLS+ML LDP+ R+TA  AL
Sbjct:   226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

GO:0007049 "cell cycle" evidence=ISS

POMBASE|SPCC16C4.11 pef1 "Pho85/PhoA-like cyclin-dependent kinase Pef1" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 49/114 (42%), Positives = 69/114 (60%)

Query:     6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
             Y+AP+  + S VY T  D+W+VGCI AEM +G+PLF     +D L  I RL G PT+++W
Sbjct:   167 YRAPDVLLGSRVYSTSIDIWSVGCIMAEMATGRPLFAGSNNEDQLLKIFRLLGTPTEQSW 226

Query:    65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
             PG + + E   + P  +  DLA      +P G++LL +ML L P+ R T  DAL
Sbjct:   227 PGISLLPEYKPTFPIYKAQDLAYLFPTFDPLGLDLLRRMLRLQPELRTTGQDAL 280

GO:0000083 "regulation of transcription involved in G1/S phase of mitotic cell cycle" evidence=IGI

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007089 "traversing start control point of mitotic cell cycle" evidence=IGI

GO:0007165 "signal transduction" evidence=IC

TAIR|locus:2064087 CDKB1;2 "cyclin-dependent kinase B1;2" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 50/115 (43%), Positives = 70/115 (60%)

Query:     6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
             Y+APE  + S+ Y T  D+W+VGCIFAEM+  + LFP G  +   L  I RL G PT++ 
Sbjct:   186 YRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFP-GDSEFQQLLHIFRLLGTPTEQQ 244

Query:    64 WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
             WPG   + +  H  P+ EP DL+     L P G++LL+QML  +P  R++A  AL
Sbjct:   245 WPGVMALRDW-HVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAAL 298

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=TAS

GO:0000307 "cyclin-dependent protein kinase holoenzyme complex" evidence=ISS

GO:0030332 "cyclin binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	142
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	4e-37
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-36
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	5e-34
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	4e-31
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	3e-30
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	8e-29
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	9e-29
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	3e-28
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	3e-28
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	9e-28
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-27
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-25
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-25
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	4e-25
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	4e-25
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-25
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	6e-25
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	9e-25
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-24
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	5e-24
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-22
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-22
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	1e-21
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-21
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	8e-21
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-20
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-20
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-20
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-20
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	9e-20
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-19
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-19
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	1e-19
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	4e-19
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	5e-19
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-18
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	9e-18
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-17
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	5e-17
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-17
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-16
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	9e-16
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	5e-15
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	6e-15
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-14
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	5e-14
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-13
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-13
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	6e-13
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	2e-12
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	2e-12
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	3e-12
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-11
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	2e-11
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	6e-09
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	3e-07
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	6e-07
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-06
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	4e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-05
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-04
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	3e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-04
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-04
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	5e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	0.001
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	0.002
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	0.002
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	0.002
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	0.003
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	0.003

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score =  128 bits (322), Expect = 4e-37
 Identities = 58/114 (50%), Positives = 74/114 (64%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP D+W+VGCIFAEMV+ KPLFP   + D L  I R+ G P +ETW
Sbjct: 169 YRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETW 228

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+  P DLA     LEP+GV+LLS+ML LDP  R+TA  AL
Sbjct: 229 PGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAAL 282

Length = 294

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  125 bits (316), Expect = 3e-36
 Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y T  D+W+VGCIFAEM++GKPLFP   + D L  I ++ G PT+E+W
Sbjct: 164 YRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESW 223

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+  P DL +    L+P G++LLS+ML  +P  R++A +AL
Sbjct: 224 PGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEAL 277

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  119 bits (301), Expect = 5e-34
 Identities = 47/114 (41%), Positives = 69/114 (60%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP D+W++GCIFAEMV+ +PLFP   + D L  I R  G P ++ W
Sbjct: 165 YRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVW 224

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   + P+    DL++    L+  G++LLS+ML  DP  R++A  AL
Sbjct: 225 PGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAAL 278

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  112 bits (281), Expect = 4e-31
 Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 2/114 (1%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S+ Y TP D+W+VGCIFAEM   +PLFP   +   L  I +L G PT++ W
Sbjct: 177 YRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW 236

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG + + +  H  PQ +P DL+     L P G++LL +ML  DP  R++A  AL
Sbjct: 237 PGVSKLRD-WHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAAL 289

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  109 bits (275), Expect = 3e-30
 Identities = 48/114 (42%), Positives = 74/114 (64%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
           Y+AP+  + S  Y T  D+W+VGCI AEM++G+PLFP    +D L  I R+ G PT+ TW
Sbjct: 166 YRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTW 225

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG + + E   + P+  P DL +     +P G++LL ++L L+P+ R++A+DAL
Sbjct: 226 PGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDAL 279

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  106 bits (268), Expect = 8e-29
 Identities = 55/141 (39%), Positives = 79/141 (56%), Gaps = 24/141 (17%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKE- 62
           Y+APE  + SS Y    D+W+VGCIFAE+++ KPLFP G+   D L+LIV + G P++E 
Sbjct: 172 YRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFP-GRDYIDQLNLIVEVLGTPSEED 230

Query: 63  ----TWPGA-NYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
               T   A NY+     SLP+     L++   G  P  ++LL +ML  DP  R+TA++A
Sbjct: 231 LKFITSEKARNYLK----SLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEA 286

Query: 118 LCIGTSEKLLAHAHLYVKTVH 138
           L           AH Y+  +H
Sbjct: 287 L-----------AHPYLAQLH 296

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  105 bits (265), Expect = 9e-29
 Identities = 49/116 (42%), Positives = 62/116 (53%), Gaps = 4/116 (3%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE  +    Y TP D+W+VGCIFAE++S +PLFP GK   D L  I R  G P  E 
Sbjct: 164 YRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFP-GKSEIDQLFKIFRTLGTPDPEV 222

Query: 64  WPG-ANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WP   +       S P+     L +      P  ++LLSQML  DP  R+TA  AL
Sbjct: 223 WPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQAL 278

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  104 bits (262), Expect = 3e-28
 Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 20/125 (16%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE  + +  Y T  D+W+VGCIFAE+++ KPLFP GK   D L+ I +L G PT++ 
Sbjct: 172 YRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFP-GKSEIDQLNKIFKLLGTPTEKI 230

Query: 64  WPGANYISELLHSLPQCEPADLAEKTH----------GLEPSGVELLSQMLCLDPDHRVT 113
           WPG          LP  +     +  +           L  +G +LL+++L  DP  R++
Sbjct: 231 WPG-------FSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRIS 283

Query: 114 ANDAL 118
           A DAL
Sbjct: 284 AEDAL 288

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  104 bits (261), Expect = 3e-28
 Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y TP D+W++G IFAEM + KPLF    + D L  I R+ G PT++ W
Sbjct: 167 YRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVW 226

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +  ++ P+ +   L      L+  G++LL +ML  DP  R++A  AL
Sbjct: 227 PGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKAL 280

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score =  103 bits (258), Expect = 9e-28
 Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 166 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 225

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   S P+    D ++    L+  G +LLSQML  DP+ R++A  AL
Sbjct: 226 PGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAAL 279

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  102 bits (256), Expect = 2e-27
 Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 4/114 (3%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
           Y+APE  + SS Y TP D+W+VGCIFAE+   +PLF    + D L  I  + G P++E W
Sbjct: 172 YRAPEVLLQSS-YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEW 230

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P  N +S    S P   P         +   G++LL +ML  +P  R++A +AL
Sbjct: 231 P-RN-VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL 282

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 98.5 bits (246), Expect = 1e-25
 Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 20/139 (14%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+APE  + S  Y    D+W+VGCI AEM+S +PLFP GK     L+LI+ + G P++E 
Sbjct: 175 YRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFP-GKDYLHQLNLILGVLGTPSQED 233

Query: 64  WPGANYIS----ELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
                 IS      + SLP        +     +P  ++LL +ML  +P  R+T  +AL 
Sbjct: 234 L--NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEAL- 290

Query: 120 IGTSEKLLAHAHLYVKTVH 138
                     AH Y++  H
Sbjct: 291 ----------AHPYLEQYH 299

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 97.1 bits (242), Expect = 2e-25
 Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 11/121 (9%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+ P+  + S+ Y T  D+W VGCIF EM +G+PLFP     +D L  I R+ G PT+ET
Sbjct: 169 YRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEET 228

Query: 64  WPGANYISELL----HSLPQCEPADLAEKTHGLE--PSGVELLSQMLCLDPDHRVTANDA 117
           WPG   +S       +S P   P  L      L+  P G EL  + L  +P  R++A +A
Sbjct: 229 WPG---VSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEA 285

Query: 118 L 118
           +
Sbjct: 286 M 286

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 96.1 bits (240), Expect = 4e-25
 Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 2/115 (1%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + S+ Y +P D+WA+GCI AE+ + +PLFP   + D L  I  + G PTK+ W
Sbjct: 164 YRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDW 223

Query: 65  P-GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P G    S+L    PQ  P  L +      P  ++L+  ML  DP  R TA+ AL
Sbjct: 224 PEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQAL 278

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 97.2 bits (242), Expect = 4e-25
 Identities = 53/139 (38%), Positives = 73/139 (52%), Gaps = 20/139 (14%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL---SLIVRLFGNPTKE 62
           Y+APE  +    Y    D+W+ GCIFAEM+ GKPLFP   KDH+   S+I  L G P  +
Sbjct: 171 YRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFP--GKDHVNQFSIITDLLGTPPDD 228

Query: 63  ---TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
              T    N +   + SLP+ EP   +EK    +PS ++LL +ML  DP  R++A +AL 
Sbjct: 229 VINTICSENTL-RFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEAL- 286

Query: 120 IGTSEKLLAHAHLYVKTVH 138
                     AH Y+   H
Sbjct: 287 ----------AHPYLAPYH 295

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 96.2 bits (240), Expect = 4e-25
 Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 18/124 (14%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD--HLSLIVRLFGNPTKET 63
           Y+APE    +  Y    D+WAVGCIFAE+++G PLFP G+ D   L+++ R  G P +ET
Sbjct: 166 YRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFP-GENDIEQLAIVFRTLGTPNEET 224

Query: 64  WPGANYISELLHSLP--------QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           WPG       L SLP        + +P  L E      P  ++LL  +L  DP  R++A 
Sbjct: 225 WPG-------LTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAA 277

Query: 116 DALC 119
           +AL 
Sbjct: 278 EALR 281

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 95.7 bits (239), Expect = 6e-25
 Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 11/121 (9%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+ PE  + ++ Y    D+W+VGCI AE+  GKP+F  G    + L  I  L G+PT E 
Sbjct: 167 YRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQ-GSTELEQLEKIFELCGSPTDEN 225

Query: 64  WPGANYISELLH----SLPQCEPADLAEK-THGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WPG   +S+L         +     L E   H ++PS ++LL ++L LDP  R++A+ AL
Sbjct: 226 WPG---VSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQAL 282

Query: 119 C 119
            
Sbjct: 283 Q 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 95.8 bits (239), Expect = 9e-25
 Identities = 50/117 (42%), Positives = 69/117 (58%), Gaps = 6/117 (5%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD--HLSLIVRLFGNPTKET 63
           Y+ PE  +    Y T  D+W +GC+FAEM + +P+   GK D   L LI +L G PT+ET
Sbjct: 192 YRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQ-GKSDIDQLHLIFKLCGTPTEET 250

Query: 64  WPGANYI--SELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WPG   +   E +HS        L E+   L P G++LLS++L LDP  R+TA+DAL
Sbjct: 251 WPGWRSLPGCEGVHSFTNYPRT-LEERFGKLGPEGLDLLSKLLSLDPYKRLTASDAL 306

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 95.1 bits (236), Expect = 2e-24
 Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 2/115 (1%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETW 64
           Y+ P+  + SS Y T  D+W VGCIF EM SG+PLFP    +D L LI RL G PT+ETW
Sbjct: 170 YRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETW 229

Query: 65  PGANYISELL-HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG +   E   ++ P+ +P  L      L+  G+ELL++ L  +   R++A +A+
Sbjct: 230 PGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAM 284

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 93.5 bits (232), Expect = 5e-24
 Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 2/115 (1%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETW 64
           Y+ P+  + S+ Y TP D+W VGCI  EM +G+P+FP    K+ L LI RL G PT+ETW
Sbjct: 169 YRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETW 228

Query: 65  PGANYISEL-LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG     E   +  PQ     L      L+  G++LLS +L  +   R++A  AL
Sbjct: 229 PGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAAL 283

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 89.7 bits (222), Expect = 2e-22
 Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 2/115 (1%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETW 64
           Y+ P+  + S+ Y T  D+W VGCIF EM +G+PLFP    ++ L  I R+ G PT+ETW
Sbjct: 170 YRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETW 229

Query: 65  PGANYISELL-HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG     E   ++ P+     L      L+  G ELLS++L  +   R++A +A+
Sbjct: 230 PGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAM 284

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 89.7 bits (223), Expect = 3e-22
 Identities = 49/123 (39%), Positives = 63/123 (51%), Gaps = 15/123 (12%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH---LSLIVRLFGNPTKE 62
           Y+APE  +  S Y T  DVW+VGCIFAE++  KPLFP   KD+   L LI  L G+P++E
Sbjct: 174 YRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFP--GKDYVHQLKLITELLGSPSEE 231

Query: 63  -----TWPGA-NYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAND 116
                    A  YI     SLP       A       P  ++LL +ML  DP  R+T  +
Sbjct: 232 DLGFIRNEKARRYI----RSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEE 287

Query: 117 ALC 119
           AL 
Sbjct: 288 ALA 290

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 88.1 bits (219), Expect = 1e-21
 Identities = 54/141 (38%), Positives = 69/141 (48%), Gaps = 24/141 (17%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE  +    Y    D+W+VGCI AE+++GK LFP G    D L  I+ L G P +E 
Sbjct: 181 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFP-GSDHIDQLKRIMNLVGTPDEEL 239

Query: 64  WPG------ANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NYI     SLPQ    D  E   G  P  ++LL +ML LDPD R+TA +A
Sbjct: 240 LQKISSESARNYIQ----SLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEA 295

Query: 118 LCIGTSEKLLAHAHLYVKTVH 138
           L           AH Y+   H
Sbjct: 296 L-----------AHPYLAEYH 305

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 87.1 bits (216), Expect = 1e-21
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 4/116 (3%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMV-SGKPLFPCGK--KDHLSLIVRLFGNPTKE 62
           Y+ P+    + +Y T  D+W+ GCIFAE+  +G+PLFP G    D L  I RL G PT+E
Sbjct: 165 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP-GNDVDDQLKRIFRLLGTPTEE 223

Query: 63  TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           +WPG + + +            L      L  +G +LL  +L  +P  R++A +AL
Sbjct: 224 SWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEAL 279

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 84.9 bits (211), Expect = 8e-21
 Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 20/123 (16%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE    +  Y    D+W+VGCIFAE++   P  P G    D L  I    G PT+E 
Sbjct: 168 YRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLP-GDSDIDQLGKIFEALGTPTEEN 226

Query: 64  WPGA----NYISELLH----SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           WPG     +Y+ E        L Q  PA   +         ++LL ++L L+P+ R+TA 
Sbjct: 227 WPGVTSLPDYV-EFKPFPPTPLKQIFPAASDD--------ALDLLQRLLTLNPNKRITAR 277

Query: 116 DAL 118
            AL
Sbjct: 278 QAL 280

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 85.5 bits (212), Expect = 1e-20
 Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 5/118 (4%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE 62
            Y+APE  +    Y T  D+W+VGCIFAEM+  + LFP GK     L LI+ + G+P++E
Sbjct: 176 WYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFP-GKNYVHQLKLILSVLGSPSEE 234

Query: 63  TWP--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                G++ + + + +LP+ +P   ++      P  ++LLSQML  DP+ R+T   AL
Sbjct: 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQAL 292

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 84.7 bits (210), Expect = 1e-20
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 10/119 (8%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+APE  +  + Y T  D+WAVGCI AE+++ KPL P GK   + L LI++L G P +  
Sbjct: 174 YRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLP-GKSEIEQLDLIIQLLGTPNESI 232

Query: 64  WPGANYISELLH----SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WPG    S+L      +LP+    +L  K   L  +G+ LL+ +L  DP  R TA +AL
Sbjct: 233 WPG---FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEAL 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 84.5 bits (210), Expect = 2e-20
 Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 16/137 (11%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE  + S+ Y    D+W+VGCI  EM+ GKPLFP G    + L  I+ + G P+ E 
Sbjct: 178 YRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFP-GTSTLNQLEKIIEVIGPPSAED 236

Query: 64  WP--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIG 121
                + + + +L SLP      L E         ++LL ++L  +P+ R+TA +AL   
Sbjct: 237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEAL--- 293

Query: 122 TSEKLLAHAHLYVKTVH 138
                    H YV   H
Sbjct: 294 --------EHPYVAQFH 302

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 84.3 bits (209), Expect = 2e-20
 Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 18/135 (13%)

Query: 2   VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK----------DHLSL 51
           V   Y+APE  + +  Y    D+WA+GCIFAE+++ +P+F   +           D L  
Sbjct: 177 VTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236

Query: 52  IVRLFGNPTKETWPG--------ANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQM 103
           I  + G PT++ WP                  + P    A   EK    +  G +LL ++
Sbjct: 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKL 296

Query: 104 LCLDPDHRVTANDAL 118
           L  DP  R+TA +AL
Sbjct: 297 LEYDPTKRITAEEAL 311

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 82.9 bits (205), Expect = 9e-20
 Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 8/117 (6%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + +  Y    D+W+VGCIFAE+++GKPLFP   + D L  I  L G P ++ W
Sbjct: 199 YRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNW 258

Query: 65  PGANYI---SELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P A  +   +E     P+    DL           ++LL  +L L+P  R++A +AL
Sbjct: 259 PQAKKLPLYTEFTPRKPK----DLKTIFPNASDDAIDLLQSLLKLNPLERISAKEAL 311

Length = 335

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 82.8 bits (205), Expect = 1e-19
 Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE  +    Y    DVW+VGCI AE++  KP+F  GK   D L+ I+++ G P +ET
Sbjct: 175 YRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFK-GKDYVDQLNQILQVLGTPDEET 233

Query: 64  WP--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               G+      + SLP               P  ++LL ++L  DP  R++  +AL
Sbjct: 234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL 290

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 81.9 bits (202), Expect = 1e-19
 Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           Y+APE  +  S Y TP D+W+VGCIFAEM   KPLF CG  + D L  I  L G P ++ 
Sbjct: 173 YRAPEV-LLQSTYATPVDMWSVGCIFAEMFRRKPLF-CGNSEADQLGKIFDLIGLPPEDD 230

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WP    +     +     P  +      +E SG +LL +ML  +P  R++A  AL
Sbjct: 231 WPRDVTLPR--GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRAL 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 82.7 bits (204), Expect = 1e-19
 Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 22/140 (15%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AEM++GKPLF      D L  I+++ G P+KE  
Sbjct: 181 YRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV 240

Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NY+      LP+    D         P  V +L +ML LD + R+TA +AL
Sbjct: 241 QKLQSEDAKNYVK----KLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEAL 296

Query: 119 CIGTSEKLLAHAHLYVKTVH 138
                      AH Y +  H
Sbjct: 297 -----------AHPYFEEFH 305

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 81.0 bits (200), Expect = 4e-19
 Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 10/120 (8%)

Query: 6   YKAPESRICSSVY--MTPH-DVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPT 60
           Y+APE  +C S +   TP  D+W++GCIFAE+++GKPLFP GK     L LI  L G P+
Sbjct: 172 YRAPE--LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFP-GKNVVHQLDLITDLLGTPS 228

Query: 61  KETWPGANYIS--ELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
            ET            L S+ + +P   ++K    +P  + LL ++L  DP  R TA +AL
Sbjct: 229 PETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEAL 288

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 80.9 bits (199), Expect = 5e-19
 Identities = 48/120 (40%), Positives = 62/120 (51%), Gaps = 11/120 (9%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 183 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 242

Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 243 KKISSESARNYIQ----SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 298

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 80.1 bits (197), Expect = 1e-18
 Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 3/117 (2%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y    D+W+VGCI AE++ GK LFP     D L  I+ + G P+ E  
Sbjct: 181 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVL 240

Query: 65  P--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
               + +  + + SLP     DL +   G  P  ++LL +ML LD D R++A++AL 
Sbjct: 241 KKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 76.9 bits (190), Expect = 9e-18
 Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 3/115 (2%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE  +    Y    D+WAVGC+F E++S  PLFP G    D ++ I  + G P  E 
Sbjct: 164 YRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFP-GTNELDQIAKIHDVLGTPDAEV 222

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                    + ++ P  +   L +        G++LL ++L  DPD R+TA  AL
Sbjct: 223 LKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQAL 277

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 77.0 bits (190), Expect = 1e-17
 Identities = 41/121 (33%), Positives = 58/121 (47%), Gaps = 12/121 (9%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETW 64
           Y+ PE  +    Y  P D+W  GCI AEM +  P+     + H L+LI +L G+ T E W
Sbjct: 189 YRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVW 248

Query: 65  PGA-NYISELLHS--LPQC----EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
           PG      EL     LPQ         L       +P  ++L+ ++L LDP  R+ A+ A
Sbjct: 249 PGVDKL--ELFKKMELPQGQKRKVKERLKPYVK--DPHALDLIDKLLVLDPAKRIDADTA 304

Query: 118 L 118
           L
Sbjct: 305 L 305

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 75.0 bits (184), Expect = 5e-17
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 7/119 (5%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP--CGKKDHLSLIVRLFGNPTKET 63
           Y+ P+  + ++ Y +  D+W  GCIF EM+ G+P FP      + L  I  + G PT++T
Sbjct: 169 YRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDT 228

Query: 64  WPGA----NYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WPG     NY  E      + +   +  K     P   +L SQML + P  R++A DAL
Sbjct: 229 WPGVSKLPNYKPEWF-LPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDAL 286

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 74.1 bits (183), Expect = 6e-17
 Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 25/113 (22%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
           Y APE  +    Y    D+W++G I  E+++GKP FP    D L  + +  G P     P
Sbjct: 162 YMAPE-VLLGKGYGKAVDIWSLGVILYELLTGKPPFPG--DDQLLELFKKIGKPKPPFPP 218

Query: 66  GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               IS                      P   +L+ ++L  DP+ R+TA +AL
Sbjct: 219 PEWDIS----------------------PEAKDLIRKLLVKDPEKRLTAEEAL 249

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 72.4 bits (178), Expect = 5e-16
 Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 20/125 (16%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH--LSLIVRLFGNPTKET 63
           Y+APE  +  + Y  P DVWA+GCI AE++ G+PLFP G  D   L LI +  G      
Sbjct: 167 YRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFP-GDSDIDQLYLIQKCLGPLPPSH 225

Query: 64  WPGANYISELLHSLPQ---------CEPADLAEKTHG-LEPSGVELLSQMLCLDPDHRVT 113
                   EL  S P+          +P  L  +  G +    ++ L   L +DP  R+T
Sbjct: 226 -------QELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLT 278

Query: 114 ANDAL 118
            ++ L
Sbjct: 279 CDELL 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 71.9 bits (176), Expect = 9e-16
 Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 17/123 (13%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE  +    Y    D+W+VGCI AEM++GK LF  GK   D L+ I+++ G      
Sbjct: 180 YRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFK-GKDYLDQLTQILKVTGV----- 233

Query: 64  WPGANYISEL--------LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
            PG  ++ +L        + SLP+    D +       P  V+LL +ML LD D R+TA 
Sbjct: 234 -PGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTAT 292

Query: 116 DAL 118
           +AL
Sbjct: 293 EAL 295

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 70.2 bits (172), Expect = 5e-15
 Identities = 44/122 (36%), Positives = 59/122 (48%), Gaps = 14/122 (11%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRLFGNPTKETW 64
           Y+APE  + S  Y +  D+W+VGCIFAE++  + LF        L LI  L G P+ E  
Sbjct: 170 YRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAM 229

Query: 65  PGA-----NYISELLHSLPQCEPA---DLAEKTHGLEPSGVELLSQMLCLDPDHRVTAND 116
             A      +I    H  P   P      ++ TH      V LL +ML  DPD R++A D
Sbjct: 230 RSACEGARAHILRGPHK-PPSLPVLYTLSSQATH----EAVHLLCRMLVFDPDKRISAAD 284

Query: 117 AL 118
           AL
Sbjct: 285 AL 286

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 69.0 bits (169), Expect = 6e-15
 Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 4/116 (3%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+ PE  +    Y    DVW+ GCI  E+ + KP+F   ++   L LI RL G+P    W
Sbjct: 183 YRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVW 242

Query: 65  PGANYISELLHSLPQCEPAD--LAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P    +    +++   +     L E+   +    ++LL  ML LDP  R TA +AL
Sbjct: 243 PDVIKLP-YFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEAL 297

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 66.7 bits (163), Expect = 4e-14
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 17/123 (13%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +  + Y    D+WAVGC+  EM++G+PLFP     D L  I++  GN      
Sbjct: 166 YRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRH- 224

Query: 65  PGANYISELLH--------SLPQCEPADLAEKTH-GLEPSGVELLSQMLCLDPDHRVTAN 115
                  E+           LP+ +  +  EK    L    ++L  Q L +DPD R +++
Sbjct: 225 ------QEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSS 278

Query: 116 DAL 118
             L
Sbjct: 279 QLL 281

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 66.6 bits (163), Expect = 5e-14
 Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 18/132 (13%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGN--PTK 61
           Y+APE  +  + Y  P DVWA+GC+FAE+++G+PL+P GK   D L LI +  G+  P  
Sbjct: 166 YRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWP-GKSDVDQLYLIRKTLGDLIPRH 224

Query: 62  ETWPGAN-YISELLHSLPQCEPA-DLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           +     N +   L  S+P+ E    L  K   +    +  L   L +DP  R+       
Sbjct: 225 QQIFSTNQFFKGL--SIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERL------- 275

Query: 120 IGTSEKLLAHAH 131
             + E+LL H +
Sbjct: 276 --SCEELLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 65.4 bits (160), Expect = 1e-13
 Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 23/116 (19%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKET 63
            Y APE  +  + Y    DVW++G I  E+++GKP F      D L LI R+ G P +  
Sbjct: 163 WYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFD 222

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
            P  +  SE                         +L+ + L  DP  R TA + L 
Sbjct: 223 EPKWSSGSE----------------------EAKDLIKKCLNKDPSKRPTAEEILQ 256

Length = 260

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 65.1 bits (158), Expect = 2e-13
 Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 19/125 (15%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+ P+  + S+ Y T  D+W VGCIF EM+ G   FP  K  +D L  I  + G P ++T
Sbjct: 169 YRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDT 228

Query: 64  WPGANYISELLHSLPQCEP--------ADLAEKTHGLE--PSGVELLSQMLCLDPDHRVT 113
           WPG       +HSLP  +P         +L +  + L       +L S++L   P +R++
Sbjct: 229 WPG-------VHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLS 281

Query: 114 ANDAL 118
           A  AL
Sbjct: 282 AQAAL 286

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 64.0 bits (156), Expect = 6e-13
 Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 34/137 (24%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL---SLIVRLFGNPTKE 62
           Y+APE  I    Y    D+W+VGCI  EM+ G  LFP    DH+   + I+   G P+ E
Sbjct: 183 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIRGTVLFP--GTDHIDQWNKIIEQLGTPSDE 239

Query: 63  TWPGANYISEL-------LHSLPQCE-------------PADLAEKTHGLEPSGV-ELLS 101
                 ++S L       + + P+               P D +E  + L+ S   +LLS
Sbjct: 240 ------FMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPD-SESHNKLKASQARDLLS 292

Query: 102 QMLCLDPDHRVTANDAL 118
           +ML +DP+ R++ +DAL
Sbjct: 293 KMLVIDPEKRISVDDAL 309

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 62.3 bits (151), Expect = 2e-12
 Identities = 45/119 (37%), Positives = 62/119 (52%), Gaps = 14/119 (11%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + SS Y TP D+W+VGCIFAEM   KPLF      D L  I+ + G P +E W
Sbjct: 175 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233

Query: 65  PGANYISELLHSLPQC----EPADLAEK-THGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P          +LP+     + A   EK    ++  G +LL + L  +P  R++A  AL
Sbjct: 234 PRDV-------ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 62.4 bits (151), Expect = 2e-12
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 21/137 (15%)

Query: 2   VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK----------DHLSL 51
           V F Y+APE  + +  Y    D+WA+GCIFAE+++ +P+F C ++          D L  
Sbjct: 177 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 236

Query: 52  IVRLFGNPTKETWPGANYISE--------LLHSLPQCEPADLAEKTHGLEP--SGVELLS 101
           I  + G P  + W     + E          ++   C      EK H ++P      LL 
Sbjct: 237 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEK-HKVKPDSKAFHLLQ 295

Query: 102 QMLCLDPDHRVTANDAL 118
           ++L +DP  R+T+  A+
Sbjct: 296 KLLTMDPIKRITSEQAM 312

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 62.1 bits (151), Expect = 3e-12
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 18/124 (14%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y++P   +  + Y    D+WA GCIFAEM++GKPLF    + + + LI+        E+ 
Sbjct: 184 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL--------ESV 235

Query: 65  P--GANYISELLHSLPQCEPADLAEKTH-------GLEPSGVELLSQMLCLDPDHRVTAN 115
           P       +ELL+ +P     D  E          G+ P  ++ L Q+L  +P  R+TA 
Sbjct: 236 PVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAE 295

Query: 116 DALC 119
           +AL 
Sbjct: 296 EALM 299

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 60.0 bits (145), Expect = 2e-11
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + ++ Y T  D+W++GCI AEM+ G P+F      D L  I+++ G PT++  
Sbjct: 236 YRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQL 295

Query: 65  P--GANYISELLHSLPQCEPADLAEK-THGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                NY        P  +P DL +    G     +  +SQ L  +P  R+   +AL
Sbjct: 296 KEMNPNYADI---KFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEAL 349

Length = 440

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 59.7 bits (144), Expect = 2e-11
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 19/136 (13%)

Query: 2   VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK----------DHLSL 51
           V F Y+APE  + +  Y    D+WA+GCIFAE+++ +P+F C ++          D L  
Sbjct: 177 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDR 236

Query: 52  IVRLFGNPTKETWPGANYISE---LLHSLPQCEPADLA----EKTHGLEPSG--VELLSQ 102
           I  + G P  + W     + E   L     +   A+ +     + H ++P      LL +
Sbjct: 237 IFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQK 296

Query: 103 MLCLDPDHRVTANDAL 118
           +L +DP  R+T+  AL
Sbjct: 297 LLTMDPTKRITSEQAL 312

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 52.8 bits (126), Expect = 6e-09
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 17/128 (13%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 184 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 241

Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 301

Query: 111 RVTANDAL 118
           R++ ++AL
Sbjct: 302 RISVDEAL 309

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 47.7 bits (113), Expect = 3e-07
 Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 23/131 (17%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  I    Y    D+W+VGCI  E+V G  +F      D  + ++   G P+ E  
Sbjct: 188 YRAPEV-ILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 246

Query: 63  ---------------TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLD 107
                           +PG ++  EL    P       +E+         +LLS+ML +D
Sbjct: 247 NRLQPTVRNYVENRPQYPGISF-EELF---PDWIFPSESERDKLKTSQARDLLSKMLVID 302

Query: 108 PDHRVTANDAL 118
           PD R++ ++AL
Sbjct: 303 PDKRISVDEAL 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 47.0 bits (111), Expect = 6e-07
 Identities = 41/132 (31%), Positives = 57/132 (43%), Gaps = 25/132 (18%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL---SLIVRLFGNPTKE 62
           Y+APE  I    Y    D+W+VGCI  EM+ G  LFP    DH+   + ++   G P  E
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFP--GTDHIDQWNKVIEQLGTPCPE 247

Query: 63  TWPG---------------ANYISELLHSLPQCE-PADLAEKTHGLEPSGVELLSQMLCL 106
                              A Y  E L   P    PAD +E          +LLS+ML +
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPAD-SEHNKLKASQARDLLSKMLVI 304

Query: 107 DPDHRVTANDAL 118
           D   R++ ++AL
Sbjct: 305 DASKRISVDEAL 316

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 45.6 bits (109), Expect = 1e-06
 Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 35/124 (28%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
           + APE  I    Y    D+W++GC   EM +GKP +     + ++ + ++          
Sbjct: 169 WMAPEV-IRGEEYGRAADIWSLGCTVIEMATGKPPWSE-LGNPMAALYKIG--------- 217

Query: 66  GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK 125
                S     +P+            L     + L + L  DP  R TA         ++
Sbjct: 218 ----SSGEPPEIPEH-----------LSEEAKDFLRKCLRRDPKKRPTA---------DE 253

Query: 126 LLAH 129
           LL H
Sbjct: 254 LLQH 257

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 44.2 bits (104), Expect = 4e-06
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 7/118 (5%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y++PE  +  + Y    D+W+VGCI  E+  G+PLFP   + D L  I ++ G P     
Sbjct: 167 YRSPE-LLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLG-PLPAEQ 224

Query: 65  PGANYISELLHSL--PQC-EPADLAEKTHG-LEPSGVELLSQMLCLDPDHRVTANDAL 118
               Y +   H L  P    P  L  +  G L    ++L+  +L L+P  R      L
Sbjct: 225 MKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCL 282

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 42.8 bits (99), Expect = 2e-05
 Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 17/117 (14%)

Query: 5   PYKAPE-SRICSSVYMTPH-DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKE 62
            Y APE     S  Y +   D+W++G    E+++G P F   K            + T +
Sbjct: 173 GYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS----------SATSQ 222

Query: 63  TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           T      I EL    P             +  +  +LL ++L  DP +R++++  L 
Sbjct: 223 TL---KIILELPT--PSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274

Length = 384

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 32/117 (27%)

Query: 6   YKAPESRICSSV-YMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVR-LFGNPTKET 63
           Y +PE  +C +  Y    D+W++GC+  E+ + K  F    ++ L L ++ L G      
Sbjct: 169 YLSPE--LCQNKPYNYKSDIWSLGCVLYELCTLKHPF--EGENLLELALKILKGQYPP-- 222

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI 120
                        +P    ++L             L+S +L  DP+ R +    L  
Sbjct: 223 -------------IPSQYSSELR-----------NLVSSLLQKDPEERPSIAQILQS 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 29/112 (25%), Positives = 42/112 (37%), Gaps = 29/112 (25%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKE--T 63
           Y APE+ I         D W++GC+  E + G P F     D       +F N       
Sbjct: 159 YLAPET-ILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD------AVFDNILSRRIN 211

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           WP                     E      P  V+L++++LC+DP  R+ AN
Sbjct: 212 WP--------------------EEVKEFCSPEAVDLINRLLCMDPAKRLGAN 243

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 10/94 (10%)

Query: 8   APESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGA 67
           APE  +  + Y    D+W++GC+  EM++GK  FP      L  I ++  N + E    +
Sbjct: 180 APEV-VKQTSYTRKADIWSLGCLVVEMLTGKHPFP--DCTQLQAIFKIGENASPE--IPS 234

Query: 68  NYISELLHSLPQCEPADLAEKTHGLEPSGVELLS 101
           N  SE +  L +    D     H   P+  ELL 
Sbjct: 235 NISSEAIDFLEKTFEID-----HNKRPTAAELLK 263

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 39.1 bits (91), Expect = 3e-04
 Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 28/113 (24%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
           Y +PE+ +    Y +  D+W++GCI  EM      F    ++ LS+++R+   PT     
Sbjct: 171 YMSPEA-LKHQGYDSKSDIWSLGCILYEMCCLAHAFE--GQNFLSVVLRIVEGPTP---- 223

Query: 66  GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                     SLP+     L             ++  ML  DP  R +A + L
Sbjct: 224 ----------SLPETYSRQLN-----------SIMQSMLNKDPSLRPSAAEIL 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 28/114 (24%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
            Y +PE ++    Y    D+W++GC+  E+ +  P  P   ++ L L  ++     +   
Sbjct: 175 YYMSPE-QLNHMSYDEKSDIWSLGCLIYELCALSP--PFTARNQLQLASKIKEGKFRR-I 230

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P   Y SEL                        E++  ML +DPD R +  + L
Sbjct: 231 P-YRYSSELN-----------------------EVIKSMLNVDPDKRPSTEELL 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 38.5 bits (89), Expect = 4e-04
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 27/115 (23%)

Query: 5   PY-KAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKET 63
           PY  APE  I  + Y T  D+W++G +  EMV G+P  P      +  + RL        
Sbjct: 181 PYWMAPEV-ISRTPYGTEVDIWSLGIMVIEMVDGEP--PYFSDSPVQAMKRL-------- 229

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                          +  P    +  H + P   + L +ML  +P  R TA + L
Sbjct: 230 ---------------RDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELL 269

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 38.2 bits (89), Expect = 5e-04
 Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 32/115 (27%)

Query: 6   YKAPESRICSSV-YMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
           Y +PE  +C  V Y    D+WA+GC+  E+              L+L         K T+
Sbjct: 167 YMSPE--LCQGVKYNFKSDIWALGCVLYEL--------------LTL---------KRTF 201

Query: 65  PGANYISELLHSLPQCEPADLAEK-THGLEPSGVELLSQMLCLDPDHRVTANDAL 118
              N    L+  + Q     +    +  L    + L+  +L  DP+ R TA++ L
Sbjct: 202 DATN-PLNLVVKIVQGNYTPVVSVYSSEL----ISLVHSLLQQDPEKRPTADEVL 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 37.2 bits (87), Expect = 0.001
 Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 33/107 (30%)

Query: 23  DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP 82
           D+WA+GCI  +M++GKP F  G  ++L      F             I +L +S P   P
Sbjct: 204 DLWALGCIIYQMLTGKPPF-RGSNEYL-----TFQK-----------ILKLEYSFPPNFP 246

Query: 83  ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH 129
            D             +L+ ++L LDP  R+  N+       ++L AH
Sbjct: 247 PDA-----------KDLIEKLLVLDPQDRLGVNE-----GYDELKAH 277

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 17/68 (25%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKP----------LFPCGKK-------DH 48
           + APE       Y    D+W++GC   EM +GKP          +F  G+        DH
Sbjct: 167 WMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDH 226

Query: 49  LSLIVRLF 56
           LS   + F
Sbjct: 227 LSDEAKDF 234

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 9/98 (9%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
           PY      I    Y    DVW++GC   EM++ KP  P  + + ++ I ++   PT    
Sbjct: 173 PYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKP--PWAEYEAMAAIFKIATQPTNPQL 230

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQ 102
           P  ++ISE       C      E  H   PS  ELL  
Sbjct: 231 P--SHISEHARDFLGC---IFVEARH--RPSAEELLRH 261

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 36.4 bits (84), Expect = 0.002
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 52
           Y APE RI    Y    DVW++G  F E+  G+  +P  +K+  SL+
Sbjct: 159 YMAPE-RISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM 204

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 36.0 bits (84), Expect = 0.003
 Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 29/115 (25%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
           Y APE  +    Y    D W++G +  EM++GKP F              +    KE + 
Sbjct: 159 YLAPEV-LLGKGYGKAVDWWSLGVLLYEMLTGKPPF--------------YAEDRKEIY- 202

Query: 66  GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI 120
               I +     P+            L P   +L+S +L  DP  R+ +  A  I
Sbjct: 203 --EKILKDPLRFPEF-----------LSPEARDLISGLLQKDPTKRLGSGGAEEI 244

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 36.1 bits (84), Expect = 0.003
 Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 31/128 (24%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
            Y APE RI  + Y    D+W++G    E+ +G+  FP             +        
Sbjct: 164 SYMAPE-RIQGNDYSVKSDIWSLGLSLIELATGR--FP-------------YPPEND-PP 206

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE 124
            G   I ELL  +    P  L   +    P   + ++   CL  D R          + +
Sbjct: 207 DG---IFELLQYIVNEPPPRLP--SGKFSPDFQDFVNL--CLIKDPRERP-------SYK 252

Query: 125 KLLAHAHL 132
           +LL H  +
Sbjct: 253 ELLEHPFI 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	142
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.97
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.95
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.95
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.95
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.94
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.94
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.94
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.93
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.91
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.91
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.91
PTZ00036	440	glycogen synthase kinase; Provisional	99.9
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.9
KOG0578	550	consensus p21-activated serine/threonine protein k	99.9
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.9
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.9
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.9
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.89
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.89
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.89
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.89
PTZ00284	467	protein kinase; Provisional	99.89
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.89
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.89
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.89
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.89
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.88
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.88
KOG0605	550	consensus NDR and related serine/threonine kinases	99.88
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.88
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.88
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.88
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.88
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.88
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.87
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.87
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.87
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.87
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.87
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.87
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.87
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.87
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.87
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.87
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.86
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.86
PLN00009	294	cyclin-dependent kinase A; Provisional	99.86
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.86
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.86
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.86
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.86
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.86
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.86
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.86
PHA03212	391	serine/threonine kinase US3; Provisional	99.86
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.85
KOG0610	459	consensus Putative serine/threonine protein kinase	99.85
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.85
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.85
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.85
KOG0198	313	consensus MEKK and related serine/threonine protei	99.85
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.85
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.85
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.85
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.85
PHA03207	392	serine/threonine kinase US3; Provisional	99.84
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.84
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.84
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.84
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.84
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.84
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.84
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.84
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.84
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.84
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.84
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.83
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.83
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.83
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.83
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.83
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.83
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.83
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.83
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.83
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.83
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.83
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.82
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.82
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.82
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.82
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.82
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.82
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.82
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.82
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.82
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.82
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.82
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.82
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.82
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.82
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.81
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.81
PHA03209	357	serine/threonine kinase US3; Provisional	99.81
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.81
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.81
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.81
PHA03211	461	serine/threonine kinase US3; Provisional	99.81
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.81
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.81
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.81
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.81
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.81
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.81
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.81
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.81
PHA03210	501	serine/threonine kinase US3; Provisional	99.81
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.8
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.8
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.8
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.8
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.8
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.8
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.8
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.8
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.8
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.8
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.8
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.8
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.79
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.79
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.79
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.79
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.79
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.79
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.79
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.79
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.79
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.79
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.79
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.79
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.79
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.78
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.78
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.78
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.78
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.78
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.78
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.78
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.78
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.78
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.78
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.78
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.78
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.78
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.78
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.78
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.78
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.78
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.78
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.78
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.78
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.78
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.78
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.78
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.77
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.77
PTZ00283	496	serine/threonine protein kinase; Provisional	99.77
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.77
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.77
PHA02988	283	hypothetical protein; Provisional	99.77
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.77
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.77
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.77
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.77
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.77
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.77
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.77
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.77
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.77
PTZ00267	478	NIMA-related protein kinase; Provisional	99.76
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.76
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.76
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.76
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.76
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.76
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.76
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.76
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.76
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.76
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.76
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.76
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.76
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.76
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.76
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.75
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.75
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.75
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.75
KOG0589	426	consensus Serine/threonine protein kinase [General	99.75
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.75
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.75
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.75
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.75
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.75
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.74
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.74
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.74
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.74
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.74
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.74
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.74
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.74
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.74
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.74
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.74
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.74
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.74
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.74
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.74
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.73
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.73
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.73
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.73
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.73
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.73
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.73
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.73
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.73
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.73
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.73
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.73
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.73
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.73
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.73
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.73
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.73
PLN00181	793	protein SPA1-RELATED; Provisional	99.73
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.73
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.72
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.72
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.72
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.72
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.72
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.72
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.72
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.72
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.72
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.71
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.71
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.71
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.71
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.71
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.71
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.71
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.71
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.71
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.7
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.7
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.7
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.69
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.69
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.69
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.69
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.68
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.68
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.68
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.68
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.67
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.67
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.67
KOG0584	632	consensus Serine/threonine protein kinase [General	99.67
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.67
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.67
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.67
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.66
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.66
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.66
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.66
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.66
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.66
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.66
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.65
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.65
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.65
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.65
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.65
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.65
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.65
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.65
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.65
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.65
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.65
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.65
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.64
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.64
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.64
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.64
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.64
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.64
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.64
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.63
PHA02882	294	putative serine/threonine kinase; Provisional	99.63
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.63
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.63
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.63
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.63
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.63
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.63
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.63
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.63
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.63
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.63
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.63
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.62
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.62
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.62
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.62
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.62
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.62
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.62
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.62
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.62
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.61
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.61
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.61
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.61
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.61
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.61
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.6
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.6
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.6
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.6
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.6
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.6
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.6
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.6
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.6
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.6
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.59
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.59
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.59
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.59
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.58
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.58
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.58
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.58
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.58
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.58
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.57
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.57
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.56
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.56
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.56
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.56
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.55
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.55
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.55
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.55
KOG0586	596	consensus Serine/threonine protein kinase [General	99.55
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.55
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.55
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.54
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.54
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.53
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.53
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.53
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.53
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.53
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.53
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.52
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.52
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.51
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.51
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.51
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.5
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.5
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.49
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.49
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.49
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.49
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.48
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.48
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.47
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.46
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.46
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.45
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.45
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.4
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.29
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.28
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.27
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.24
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.24
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.23
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.15
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.1
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.1
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.09
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.09
KOG3653	534	consensus Transforming growth factor beta/activin	99.06
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.02
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.0
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.95
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	98.94
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.92
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.9
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.63
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.62
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.59
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.5
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.42
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	98.37
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.37
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.29
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.06
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.88
KOG1266	458	consensus Protein kinase [Signal transduction mech	97.33
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.52
KOG1093	725	consensus Predicted protein kinase (contains TBC a	95.95
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	95.39
COG4248	637	Uncharacterized protein with protein kinase and he	89.93
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	88.29

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.6e-30  Score=170.41  Aligned_cols=135  Identities=34%  Similarity=0.539  Sum_probs=120.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCc--cchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGA--NYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (142)
                      .|++|+|||+++....|+.++||||+||++.||++|++.|.+. ..+++..+...+|.++.......  .....+..+++
T Consensus       189 aTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp  268 (359)
T KOG0660|consen  189 ATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLP  268 (359)
T ss_pred             eeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCC
Confidence            4899999999988889999999999999999999999999988 66889999999999876655432  33556889999


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcccccccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKT  136 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~~~~~  136 (142)
                      +.+..++...++..++.+.+|+.+||..||.+|+|++|+|+|||+....+....++..
T Consensus       269 ~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~~~  326 (359)
T KOG0660|consen  269 QIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPVCQ  326 (359)
T ss_pred             CCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCCCC
Confidence            9999999999999999999999999999999999999999999999888877766443

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.95  E-value=1.5e-28  Score=157.44  Aligned_cols=125  Identities=36%  Similarity=0.561  Sum_probs=111.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|++|+|||.++|...|+..+|+||+||++.||+.+.+.|.+. +.+++..+++.+|.|.+..|++....+.+...- +.
T Consensus       163 ~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~-~~  241 (318)
T KOG0659|consen  163 VTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ-QF  241 (318)
T ss_pred             eeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh-cC
Confidence            5899999999999999999999999999999999998888877 889999999999999999999998888876443 44


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      +......++...+.++.+|+.+|+.+||.+|++|.|+++|+||....
T Consensus       242 P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P  288 (318)
T KOG0659|consen  242 PKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP  288 (318)
T ss_pred             CCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence            44444558888999999999999999999999999999999999643

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.95  E-value=8.5e-28  Score=158.41  Aligned_cols=126  Identities=35%  Similarity=0.647  Sum_probs=113.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHh-hcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELL-HSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   79 (142)
                      +|++|+|||.+++...|+.++|+||+|||+.||+.+++.|.+. +.+++..|+..+|.|....|+......... ..+..
T Consensus       239 VTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~  318 (419)
T KOG0663|consen  239 VTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSE  318 (419)
T ss_pred             EEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCC
Confidence            6899999999999999999999999999999999999999988 789999999999999999999888777663 66677


Q ss_pred             CCCchhHhhhcCCC--chHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTHGLE--PSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~~~~--~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      .+...+...+...+  +...+|+.++|.+||.+|.||++.|+|.||.+..
T Consensus       319 ~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P  368 (419)
T KOG0663|consen  319 HPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP  368 (419)
T ss_pred             CCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence            77777777775554  8889999999999999999999999999999854

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=4.1e-27  Score=160.85  Aligned_cols=126  Identities=34%  Similarity=0.579  Sum_probs=114.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccc-hHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANY-ISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (142)
                      .|+||+|||+++....|+.++|+|++||+++|+++-++.|.+. +.+++.+|-+.+|.|....++.... ...+.-.+++
T Consensus       171 STRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~  250 (538)
T KOG0661|consen  171 STRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQ  250 (538)
T ss_pred             hcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCc
Confidence            5899999999998889999999999999999999999999988 7799999999999999998887543 3445678889


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ....++..+.+..+.++.++|.+|+.+||.+||||+++++||||..-.
T Consensus       251 ~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~  298 (538)
T KOG0661|consen  251 VKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR  298 (538)
T ss_pred             CCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence            999999999999999999999999999999999999999999999543

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.94  E-value=9.6e-27  Score=154.01  Aligned_cols=135  Identities=37%  Similarity=0.696  Sum_probs=120.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|.+|+|||++++...|+..+||||+||+++||++++..|.+. +..++..|...++.|....|+.......+...++..
T Consensus       182 vTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~  261 (323)
T KOG0594|consen  182 VTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKW  261 (323)
T ss_pred             EEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCC
Confidence            6899999999999999999999999999999999999999888 778999999999999999999999888888777665


Q ss_pred             C-CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcccccccc
Q 048170           81 E-PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKT  136 (142)
Q Consensus        81 ~-~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~~~~~  136 (142)
                      . ...+....+....+..+++.+||+.+|.+|.+|+.++.|+||.....+...+..+
T Consensus       262 ~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~~~~~~  318 (323)
T KOG0594|consen  262 PGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKSSQLLLQ  318 (323)
T ss_pred             CCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccchhhhhcc
Confidence            5 6677777777778999999999999999999999999999999886665554443

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.94  E-value=4.5e-27  Score=153.41  Aligned_cols=128  Identities=29%  Similarity=0.484  Sum_probs=105.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHh-hcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELL-HSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   79 (142)
                      .|+||+|||.+.+..+|+.++|||++||++.||++|++.|.+. +.+++..|...+|...+....-....+.|. ..++.
T Consensus       163 ATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~  242 (396)
T KOG0593|consen  163 ATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPE  242 (396)
T ss_pred             hhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCC
Confidence            4899999999999889999999999999999999999999888 789999999998876655433333333332 33333


Q ss_pred             -CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           80 -CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        80 -~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                       ....+++..++..+.-..+|+++||.+||.+|+++++++.|++|.+..+.
T Consensus       243 ~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~er  293 (396)
T KOG0593|consen  243 PEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFIER  293 (396)
T ss_pred             CCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHHHH
Confidence             33567778888899999999999999999999999999999999876544

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=1.7e-26  Score=158.80  Aligned_cols=123  Identities=34%  Similarity=0.570  Sum_probs=107.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC-C
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLP-Q   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   79 (142)
                      +|+||+|||++++...|+.++|+||.||||.||+.|++.|++. +.++++.|++.+|.|....|+ ....+.+...-+ +
T Consensus       281 vTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~-~~kLP~~~~~kp~~  359 (560)
T KOG0600|consen  281 VTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP-VSKLPHATIFKPQQ  359 (560)
T ss_pred             EEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc-cccCCcccccCCCC
Confidence            5899999999999999999999999999999999999999998 779999999999999999988 444443322222 2


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                      .....+.+.++.++..+.+|+..||..||.+|.||.++|+|.||..
T Consensus       360 ~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t  405 (560)
T KOG0600|consen  360 PYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT  405 (560)
T ss_pred             cccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence            3356667889999999999999999999999999999999999953

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.93  E-value=5.1e-27  Score=155.79  Aligned_cols=127  Identities=31%  Similarity=0.527  Sum_probs=107.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|++|+|||.+++.+.|+.++||||.|||+.||+.|++.|.+. ..+++..+++.+|.|..+......... ....+++.
T Consensus       187 cSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y-~~~~~p~i  265 (364)
T KOG0658|consen  187 CSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNY-TEFKFPQI  265 (364)
T ss_pred             EeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccc-ccccCccc
Confidence            4789999999999999999999999999999999999999988 778999999999998877655433322 13444555


Q ss_pred             CCchhHh-hhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           81 EPADLAE-KTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        81 ~~~~~~~-~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ....+.+ ..+..+.+..+|+.++|.++|.+|.++.+++.||||+...+.
T Consensus       266 k~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  266 KAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             ccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence            5555544 457789999999999999999999999999999999988766

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.91  E-value=4.3e-24  Score=143.17  Aligned_cols=122  Identities=39%  Similarity=0.719  Sum_probs=93.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhh-cCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLH-SLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   79 (142)
                      +|..|+|||++.+...++.++|+||+||++|+|++|+.||.+. .......+....+.++...++.......+.. .++.
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (288)
T cd07871         165 VTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQ  244 (288)
T ss_pred             ecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCc
Confidence            5778999999776667899999999999999999999999876 3455566777777777766655444333322 2223


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ....+........+.++++||.+||.+||++|+|++++++||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         245 YRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             cCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            33333444456678899999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.91  E-value=2.4e-24  Score=141.44  Aligned_cols=126  Identities=33%  Similarity=0.555  Sum_probs=104.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC----------ChhHHHHHHHHhCCCCCCCCCCccchH
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG----------KKDHLSLIVRLFGNPTKETWPGANYIS   71 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (142)
                      +|.+|+|||.+++...|+.++|+|++||++.||++-++.|.+.          ..+++..|.+.+|.|..+.|+.....+
T Consensus       201 VTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~P  280 (438)
T KOG0666|consen  201 VTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMP  280 (438)
T ss_pred             EEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCc
Confidence            5899999999999999999999999999999999999999765          225788899999999999998776665


Q ss_pred             HHh---hcCC-----CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           72 ELL---HSLP-----QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        72 ~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ++.   .++.     +.....+......-++...+|+.+||.+||.+|.|++++++|+||....
T Consensus       281 e~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~  344 (438)
T KOG0666|consen  281 EYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP  344 (438)
T ss_pred             chHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence            552   2222     2224445555565666789999999999999999999999999999764

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.91  E-value=3.7e-25  Score=155.78  Aligned_cols=123  Identities=29%  Similarity=0.471  Sum_probs=93.1

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC---C
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSL---P   78 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~   78 (142)
                      +++|+|||++++. .|+.++||||+|||++||.+|.+.|.+. ..++++.|++.+|.|+............+....   +
T Consensus       351 SRfYRAPEVILGl-pY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~  429 (586)
T KOG0667|consen  351 SRFYRAPEVILGL-PYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFP  429 (586)
T ss_pred             ccccccchhhccC-CCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCce
Confidence            5789999998876 9999999999999999999999999888 668999999999988877655444443333320   0


Q ss_pred             C-----------------------------C-CCchhHhhhc-CCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           79 Q-----------------------------C-EPADLAEKTH-GLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        79 ~-----------------------------~-~~~~~~~~~~-~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                      .                             . ....+..... .-...+.+||.+||.+||.+|+|+.++++|||+...
T Consensus       430 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~  508 (586)
T KOG0667|consen  430 RLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT  508 (586)
T ss_pred             eeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence            0                             0 0111111112 223456899999999999999999999999999954

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.90  E-value=6.2e-24  Score=149.78  Aligned_cols=126  Identities=29%  Similarity=0.514  Sum_probs=90.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHH-hhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISEL-LHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   79 (142)
                      ||+.|+|||++.+...++.++|+||+||++|+|++|.+||.+. ....+..++..++.+.........  ..+ ...++.
T Consensus       232 ~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~--~~~~~~~~~~  309 (440)
T PTZ00036        232 CSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMN--PNYADIKFPD  309 (440)
T ss_pred             CCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhc--hhhhcccCCc
Confidence            5788999999777668999999999999999999999999876 445666677766654433211110  001 011222


Q ss_pred             CCCchhHhhh-cCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           80 CEPADLAEKT-HGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        80 ~~~~~~~~~~-~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      .....+...+ ...+.++++||.+||.+||.+|+|+.++++||||..+...
T Consensus       310 ~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~  360 (440)
T PTZ00036        310 VKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDP  360 (440)
T ss_pred             cCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhcc
Confidence            2222222222 3467889999999999999999999999999999987653

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.90  E-value=3.6e-24  Score=142.59  Aligned_cols=103  Identities=22%  Similarity=0.328  Sum_probs=78.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC--Ch-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KK-DHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||..|||||.+.+. .|+.++||||+|++++|+++|+.||...  .. .....+-.....+++.. +.            
T Consensus       239 GT~~YMsPERi~g~-~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~l-P~------------  304 (364)
T KOG0581|consen  239 GTSAYMSPERISGE-SYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRL-PE------------  304 (364)
T ss_pred             ccccccChhhhcCC-cCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCC-Cc------------
Confidence            89999999995544 9999999999999999999999999754  11 22222222222222222 11            


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                                 ..+++++++|+..||++||.+|++++|+++|||++.....
T Consensus       305 -----------~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~  344 (364)
T KOG0581|consen  305 -----------GEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDP  344 (364)
T ss_pred             -----------ccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcccc
Confidence                       1389999999999999999999999999999999966543

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=5.2e-24  Score=148.06  Aligned_cols=99  Identities=22%  Similarity=0.325  Sum_probs=80.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||++|||||+ ...+.|+.++||||+|++..||+.|++||.....-..-.++...+.+.....                 
T Consensus       431 GTPYWMAPEV-vtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~-----------------  492 (550)
T KOG0578|consen  431 GTPYWMAPEV-VTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNP-----------------  492 (550)
T ss_pred             CCCCccchhh-hhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCc-----------------
Confidence            8999999999 5567999999999999999999999999986644343334444444333332                 


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                              ..++.++++||.+||+.|+.+|++|.++|+||||...
T Consensus       493 --------~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a  529 (550)
T KOG0578|consen  493 --------EKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMA  529 (550)
T ss_pred             --------cccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence                    3489999999999999999999999999999999644

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.90  E-value=2.9e-23  Score=140.02  Aligned_cols=128  Identities=30%  Similarity=0.544  Sum_probs=87.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC--hhHHHHHHHHhCCCCCCCCCCccchHHHh-hcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKETWPGANYISELL-HSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   78 (142)
                      +|+.|+|||++.+...++.++|+||+||++|+|++|..||.+..  ...+..+....+.+....++.......+. ..+.
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (303)
T cd07869         165 VTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFT  244 (303)
T ss_pred             ccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccccccc
Confidence            57889999997666678999999999999999999999997652  23445555555554444333222111111 1111


Q ss_pred             CCCCchhHhhh--cCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           79 QCEPADLAEKT--HGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        79 ~~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ..........+  ...+.++.+|+.+||+.||++|+|++++++||||.++...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~~  297 (303)
T cd07869         245 LYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPPR  297 (303)
T ss_pred             ccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCChh
Confidence            11112222222  1245788999999999999999999999999999987543

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.90  E-value=1.5e-23  Score=133.87  Aligned_cols=99  Identities=24%  Similarity=0.331  Sum_probs=79.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhC-CCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFG-NPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.||+||++. ...|+..+|||+.|++||-|+.|.+||-+.+.+.+..-+.... ..+...                 
T Consensus       174 GtP~fmaPEvvr-kdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~-----------------  235 (355)
T KOG0033|consen  174 GTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPE-----------------  235 (355)
T ss_pred             CCCcccCHHHhh-cCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcc-----------------
Confidence            899999999954 5599999999999999999999999998765555544332211 112222                 


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                              +..+++++++|+++||..||.+|.|+.|+|+|||+.+-
T Consensus       236 --------w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  236 --------WDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR  273 (355)
T ss_pred             --------cCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence                    24589999999999999999999999999999999853

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=1.4e-23  Score=146.99  Aligned_cols=102  Identities=21%  Similarity=0.297  Sum_probs=82.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|.|||++. ...++--+||||+||++|.|+.|++||+..........+......-+                    
T Consensus       180 GTPNYIAPEVl~-k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P--------------------  238 (592)
T KOG0575|consen  180 GTPNYIAPEVLN-KSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMP--------------------  238 (592)
T ss_pred             CCCcccChhHhc-cCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccc--------------------
Confidence            899999999965 55899999999999999999999999998866666555554332222                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcccc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHL  132 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~  132 (142)
                              ...+.++++||.++|..||.+||++++++.|+||..-.-+..+
T Consensus       239 --------~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~~l  281 (592)
T KOG0575|consen  239 --------SHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFTPARL  281 (592)
T ss_pred             --------cccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCcCCCC
Confidence                    2378999999999999999999999999999999543333333

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=7e-24  Score=145.71  Aligned_cols=126  Identities=28%  Similarity=0.437  Sum_probs=101.3

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-------ChhHHHHHHHHhCCCCCCCCCCccchHHHh-
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-------KKDHLSLIVRLFGNPTKETWPGANYISELL-   74 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   74 (142)
                      |+.|+|||++++. .|+.++||||++|+.|||+||.+.|...       +.++++.|++.++..|....-.......|+ 
T Consensus       414 TRQYRapEVllGs-gY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFn  492 (590)
T KOG1290|consen  414 TRQYRAPEVLLGS-GYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFN  492 (590)
T ss_pred             hhhccCcceeecC-CCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhc
Confidence            7899999998877 9999999999999999999999999544       557899999999998887766666666664 


Q ss_pred             -----hcCCCCCCchhHhhh-------cCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           75 -----HSLPQCEPADLAEKT-------HGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        75 -----~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                           .++.+..+.++.+.+       ..-..++.+||.-||+++|++|+||+++++|||+..+...
T Consensus       493 r~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~~  559 (590)
T KOG1290|consen  493 RRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAGP  559 (590)
T ss_pred             cccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCCCC
Confidence                 445555555554443       1133556799999999999999999999999999976543

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.89  E-value=1.1e-22  Score=135.94  Aligned_cols=122  Identities=37%  Similarity=0.696  Sum_probs=92.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|+|||.+.+...++.++|+||+|+++++|++|+.||.+. .......+...++.+....++.......+...++..
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
T cd07861         163 VTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKW  242 (285)
T ss_pred             ccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhcccc
Confidence            4678999999766666889999999999999999999999866 334444555555555555555444445555555544


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ............+.++.++|.+||..||.+|||++++++||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         243 KKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             CcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            4444445556688999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.89  E-value=7.5e-23  Score=138.35  Aligned_cols=128  Identities=39%  Similarity=0.720  Sum_probs=95.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHh-hcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELL-HSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   79 (142)
                      +|..|+|||.+.+...++.++|+||+|+++++|++|+.||.+.. ......+...++.+....++.......+. ..++.
T Consensus       166 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (309)
T cd07872         166 VTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPK  245 (309)
T ss_pred             ccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCc
Confidence            57789999997666678999999999999999999999997763 34555666666666555544333222221 22233


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ............++.++++||.+||..||.+|+|++++++||||+.....
T Consensus       246 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~  295 (309)
T cd07872         246 YKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTR  295 (309)
T ss_pred             cCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcccc
Confidence            33333444556688899999999999999999999999999999986544

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.89  E-value=6.4e-23  Score=137.39  Aligned_cols=119  Identities=34%  Similarity=0.597  Sum_probs=88.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||.+.+ ..++.++|+||+||++|+|++|.+||.+. ..+....+....+.+.+..++.......  ..+...
T Consensus       171 ~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~  247 (290)
T cd07862         171 VTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR--QAFHSK  247 (290)
T ss_pred             ccccccChHHHhC-CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccc--hhccCC
Confidence            6788999999654 47889999999999999999999999876 4456666666666555444332211111  112222


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ...........++..+++|+.+||..||++||++.++++||||
T Consensus       248 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         248 SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             CCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            3344445556788899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PTZ00284 protein kinase; Provisional

Probab=99.89  E-value=4.4e-23  Score=146.48  Aligned_cols=128  Identities=23%  Similarity=0.320  Sum_probs=84.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCcc--chHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGAN--YISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+. .++.++||||+||++|||++|+.||.+. ....+..+...++..+........  ....+.....
T Consensus       307 gt~~Y~APE~~~~~-~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~  385 (467)
T PTZ00284        307 STRHYRSPEVVLGL-GWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAG  385 (467)
T ss_pred             CCccccCcHHhhcC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcc
Confidence            68899999996544 8999999999999999999999999876 445555666666655433211100  0011111111


Q ss_pred             CC----CCchhHhhh-------cCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           79 QC----EPADLAEKT-------HGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        79 ~~----~~~~~~~~~-------~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                      ..    .........       ......+.+||.+||++||.+|+|++|+++||||......+
T Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~~  448 (467)
T PTZ00284        386 QLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYPEC  448 (467)
T ss_pred             cccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCCcc
Confidence            10    000000000       01235678999999999999999999999999999865433

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.89  E-value=4.3e-23  Score=139.88  Aligned_cols=122  Identities=29%  Similarity=0.618  Sum_probs=81.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC----------hhHHHHHHHHhCCCCCCCCCCccchH
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK----------KDHLSLIVRLFGNPTKETWPGANYIS   71 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (142)
                      ||+.|+|||++.+...++.++|+||+||++++|++|++||....          ...+..++..++.+....+.......
T Consensus       177 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (317)
T cd07868         177 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMP  256 (317)
T ss_pred             ccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhcc
Confidence            57889999997776678999999999999999999999996542          23455566666655444333221111


Q ss_pred             HH---hhc-----CCCCCCch-hHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           72 EL---LHS-----LPQCEPAD-LAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        72 ~~---~~~-----~~~~~~~~-~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ..   ...     ........ ........+.++.+||.+||.+||.+|+|++++++||||
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         257 EHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             chhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            10   000     00111111 111112245678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.89  E-value=8.4e-23  Score=139.46  Aligned_cols=129  Identities=34%  Similarity=0.561  Sum_probs=91.6

Q ss_pred             ccCcccchhhhcCC-CCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCc--cchHHHhhcC
Q 048170            2 VEFPYKAPESRICS-SVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGA--NYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~-~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   77 (142)
                      ||..|+|||++.+. ..++.++||||+||++|+|++|+.||.+.. ......+....+.++.......  .....+...+
T Consensus       168 ~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  247 (338)
T cd07859         168 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSM  247 (338)
T ss_pred             CCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhh
Confidence            67889999996542 578899999999999999999999997663 3444445555554433322111  1112223333


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                      ...........+...+.++.+++.+||..||++||+++++++||||.......
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~  300 (338)
T cd07859         248 RKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVE  300 (338)
T ss_pred             cccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCccc
Confidence            33344444555567788899999999999999999999999999998765543

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=1.4e-24  Score=146.42  Aligned_cols=101  Identities=23%  Similarity=0.329  Sum_probs=76.1

Q ss_pred             ccCcccchhhhcCC--CCCChhhhHHHHHHHHHHHHhCCCCcCCC-Chh-HHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICS--SVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKD-HLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~--~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||+.|.|||++.+.  ..++.++|+||+||+||-+++|.+||... ... ...++.+ ..   -..              
T Consensus       340 GTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~-G~---y~f--------------  401 (475)
T KOG0615|consen  340 GTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK-GR---YAF--------------  401 (475)
T ss_pred             CCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc-Cc---ccc--------------
Confidence            89999999997643  23556899999999999999999999755 222 2222211 11   000              


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                             -...+..+++++++||.+||..||++|++++++|+||||+...
T Consensus       402 -------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  402 -------GPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             -------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence                   1122355899999999999999999999999999999999543

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.89  E-value=3.3e-24  Score=143.30  Aligned_cols=124  Identities=26%  Similarity=0.399  Sum_probs=89.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC--C
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSL--P   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   78 (142)
                      .|.+|+|||++++- +++..+||||+||||+|+.+|...|++. +.++++-+...+|+.|........ ..+++...  .
T Consensus       271 sTRHYRAPEViLgL-GwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~-~~Kyf~~~rld  348 (415)
T KOG0671|consen  271 STRHYRAPEVILGL-GWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTR-KEKYFRRGRLD  348 (415)
T ss_pred             eccccCCchheecc-CcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhh-hHhhhhccccc
Confidence            48899999998766 9999999999999999999999999887 667888888888876666544332 22221111  1


Q ss_pred             CCC-------------CchhHhhhcC---CCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           79 QCE-------------PADLAEKTHG---LEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        79 ~~~-------------~~~~~~~~~~---~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ..+             ..++......   ...++.|||++||.+||.+|+|+.|++.||||....
T Consensus       349 w~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  349 WPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             CccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence            000             0111111111   223457999999999999999999999999998753

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.88  E-value=2.1e-22  Score=134.51  Aligned_cols=122  Identities=38%  Similarity=0.677  Sum_probs=95.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|+|||.+.+...++.++|+||+|+++++|++|+.||... .......++...+.+....++...........++..
T Consensus       162 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd07860         162 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKW  241 (284)
T ss_pred             ccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccc
Confidence            4567999998665556788999999999999999999999766 445556666777766665555555555555555555


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ...........++.+++++|.+||..||.+||+++++++||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         242 ARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             cccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            5555555556688899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.88  E-value=2.3e-22  Score=137.75  Aligned_cols=128  Identities=33%  Similarity=0.555  Sum_probs=92.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCc--cchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGA--NYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|..||.+.. ...+..+....+.+........  .....+...++
T Consensus       177 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (343)
T cd07878         177 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLP  256 (343)
T ss_pred             ccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccc
Confidence            67889999997765678999999999999999999999997663 3444444444444333221111  11222333444


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ..............+..+.+|+.+||..||++|||+.++++||||.....+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~  307 (343)
T cd07878         257 HMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDP  307 (343)
T ss_pred             cccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCC
Confidence            444455555566678889999999999999999999999999999876543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.88  E-value=1.3e-22  Score=140.52  Aligned_cols=95  Identities=25%  Similarity=0.411  Sum_probs=77.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhC----CCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFG----NPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||+-|+|||++++. +|+..+|.||+|||+|||+.|.+||.+.........+....    .|..                
T Consensus       350 GTPDYiAPEVll~k-gY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~----------------  412 (550)
T KOG0605|consen  350 GTPDYIAPEVLLGK-GYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE----------------  412 (550)
T ss_pred             CCccccchHHHhcC-CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc----------------
Confidence            89999999997766 79999999999999999999999999886655544333221    1111                


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCC---HHHHhcCCCccch
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT---ANDALCIGTSEKL  126 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t---~~~~l~~~~~~~~  126 (142)
                                  ...+.++.|||.++|+ ||++|+.   ++||.+||||+.+
T Consensus       413 ------------~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v  451 (550)
T KOG0605|consen  413 ------------VDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV  451 (550)
T ss_pred             ------------CcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence                        1266899999999999 9999986   8899999999964

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.88  E-value=2.9e-22  Score=133.80  Aligned_cols=122  Identities=30%  Similarity=0.544  Sum_probs=82.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC--ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      +|..|+|||.+.+...++.++|+||+||++++|++|..|+...  .......+...++.+....++..............
T Consensus       161 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd07839         161 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMY  240 (284)
T ss_pred             cccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCC
Confidence            4678999999776666889999999999999999998876433  23344445555544433332221111111101111


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      .....+.+.....+.++++|+.+||..||.+|||++++++||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         241 PATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             CCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            11122234445688899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.88  E-value=4e-22  Score=133.38  Aligned_cols=119  Identities=37%  Similarity=0.621  Sum_probs=86.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++.+ ..++.++|+||+||++|+|++|.++|... .......+....+.+....++......  ...+...
T Consensus       169 ~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  245 (288)
T cd07863         169 VTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP--RGAFSPR  245 (288)
T ss_pred             ccccccCchHhhC-CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc--ccccCCC
Confidence            5778999999654 47899999999999999999999999766 444555666665554444333211110  1122223


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ............+.++.+|+.+||+.||++||++.+++.||||
T Consensus       246 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         246 GPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             CCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            3344455566788899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=1.4e-22  Score=143.68  Aligned_cols=98  Identities=27%  Similarity=0.294  Sum_probs=83.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+++|.|||+++|....+.++||||.|+|||.|++|+.||.+.+...+-..++....                       
T Consensus       173 GSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f-----------------------  229 (786)
T KOG0588|consen  173 GSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF-----------------------  229 (786)
T ss_pred             CCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc-----------------------
Confidence            789999999999888888999999999999999999999997777666555543221                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                           +..+.++.++++||++||..||++|+|.++|++|||+....
T Consensus       230 -----~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~  270 (786)
T KOG0588|consen  230 -----EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT  270 (786)
T ss_pred             -----cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence                 11244899999999999999999999999999999988543

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.88  E-value=2.3e-22  Score=134.54  Aligned_cols=121  Identities=24%  Similarity=0.348  Sum_probs=78.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHh-hcCC-
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELL-HSLP-   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-   78 (142)
                      ||..|+|||++.+. .++.++|+||+||++|+|++|+.||.+.. ......+....+..+............+. ...+ 
T Consensus       163 ~~~~y~aPE~~~~~-~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (287)
T cd07848         163 ATRWYRSPELLLGA-PYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPA  241 (287)
T ss_pred             cccccCCcHHHcCC-CCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCc
Confidence            57889999996544 68899999999999999999999998663 33334444433332221111000000000 0000 


Q ss_pred             -CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           79 -QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        79 -~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                       ..............+.++.+|+.+||.+||++|+|++++++||||
T Consensus       242 ~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         242 VNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             ccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence             000111112234478889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.88  E-value=2.5e-22  Score=139.45  Aligned_cols=96  Identities=23%  Similarity=0.393  Sum_probs=79.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||-.|.+||++ .....+.++|+|+|||++|.|+.|++||.+.+...+-+.+..+...-+                    
T Consensus       249 GTAeYVSPElL-~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp--------------------  307 (604)
T KOG0592|consen  249 GTAEYVSPELL-NDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP--------------------  307 (604)
T ss_pred             eeecccCHHHh-cCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC--------------------
Confidence            78899999994 455889999999999999999999999998866655444443332222                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                              .++++.+++|++++|..||++|+|+.||.+||||..+
T Consensus       308 --------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V  344 (604)
T KOG0592|consen  308 --------EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV  344 (604)
T ss_pred             --------CCCCHHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence                    3367899999999999999999999999999999965

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=5.8e-23  Score=139.41  Aligned_cols=98  Identities=23%  Similarity=0.314  Sum_probs=76.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||++|||||++. +..|+.++||||+|++.+||++|.+|+....+-                        ...-.+++..
T Consensus       173 GTPfwMAPEVI~-~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm------------------------rvlflIpk~~  227 (467)
T KOG0201|consen  173 GTPFWMAPEVIK-QSGYDTKADIWSLGITAIELAKGEPPHSKLHPM------------------------RVLFLIPKSA  227 (467)
T ss_pred             ccccccchhhhc-cccccchhhhhhhhHHHHHHhcCCCCCcccCcc------------------------eEEEeccCCC
Confidence            899999999966 559999999999999999999999999644321                        1111122222


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      +..+.   ..++..+++|+..||..||+.||+|.++++|+|++...
T Consensus       228 PP~L~---~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~  270 (467)
T KOG0201|consen  228 PPRLD---GDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK  270 (467)
T ss_pred             CCccc---cccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence            22222   24888999999999999999999999999999999743

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.87  E-value=8.8e-22  Score=132.65  Aligned_cols=126  Identities=36%  Similarity=0.644  Sum_probs=87.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHH-hhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISEL-LHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   79 (142)
                      +|..|++||.+.+...++.++|+||+|+++|+|++|+.||.... ......+...++.+....++.......+ ....+.
T Consensus       166 ~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (301)
T cd07873         166 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPK  245 (301)
T ss_pred             eeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCc
Confidence            46789999997666678899999999999999999999997663 3444455555555444443322111111 011111


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ............++.++++||.+||..||.+|||++++++||||....
T Consensus       246 ~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         246 YRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             cccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            111222233356788899999999999999999999999999998764

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=7.3e-22  Score=126.75  Aligned_cols=126  Identities=30%  Similarity=0.526  Sum_probs=104.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhc----
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHS----   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   76 (142)
                      +|++|++||.+++...|+++.|+|..||++.||+++.+.+++. +.+++..|...+|....+.||.....+-+...    
T Consensus       190 vTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~eP  269 (376)
T KOG0669|consen  190 VTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEP  269 (376)
T ss_pred             eeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCC
Confidence            4899999999999999999999999999999999999999888 66788888899999999999988777665433    


Q ss_pred             CCCCCCchhHhhhc--CCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           77 LPQCEPADLAEKTH--GLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        77 ~~~~~~~~~~~~~~--~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      +++.......+..+  .-.+++.+|+.++|..||.+|+++.++++|.||+.-.
T Consensus       270 l~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp  322 (376)
T KOG0669|consen  270 LPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP  322 (376)
T ss_pred             CCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence            33344444443332  2345788999999999999999999999999998543

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.87  E-value=5.2e-22  Score=121.95  Aligned_cols=126  Identities=30%  Similarity=0.582  Sum_probs=111.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      +|++|++|.++++.+-|+.+.|+||.||++.|+.. |.+.|.+. -.+++..|...++.+..+.|+.....+.+....-.
T Consensus       163 vtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~y  242 (292)
T KOG0662|consen  163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIY  242 (292)
T ss_pred             eeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCc
Confidence            58999999999999899999999999999999985 66777766 55788999999999999999998888887765556


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ..-..+.+..+......++|+.++|.-+|.+|.+|+++++||||.+..
T Consensus       243 pattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s  290 (292)
T KOG0662|consen  243 PATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS  290 (292)
T ss_pred             cccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence            666777888888999999999999999999999999999999998753

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.87  E-value=3.4e-22  Score=133.14  Aligned_cols=96  Identities=23%  Similarity=0.264  Sum_probs=77.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhC-CCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFG-NPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|||||++++. .|+.++|.||+|+++|+|++|.+||.+.+.......+.... ..++                   
T Consensus       187 GT~eYmAPEil~~~-gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p-------------------  246 (357)
T KOG0598|consen  187 GTPEYMAPEILLGK-GYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP-------------------  246 (357)
T ss_pred             CCccccChHHHhcC-CCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC-------------------
Confidence            89999999997655 99999999999999999999999998776544433332211 1111                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCC----CHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRV----TANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~----t~~~~l~~~~~~~~  126 (142)
                               ...+.++++|++++|..||++|+    ++.++.+||||..+
T Consensus       247 ---------~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i  287 (357)
T KOG0598|consen  247 ---------GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGI  287 (357)
T ss_pred             ---------ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence                     12788999999999999999997    58889999999965

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.87  E-value=5.9e-22  Score=134.23  Aligned_cols=122  Identities=29%  Similarity=0.566  Sum_probs=80.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC----------hhHHHHHHHHhCCCCCCCCCCccchH
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK----------KDHLSLIVRLFGNPTKETWPGANYIS   71 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (142)
                      ||..|+|||++.+...++.++|+||+||++|+|++|++||....          ......+...++.+....+.......
T Consensus       177 ~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (317)
T cd07867         177 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMP  256 (317)
T ss_pred             ecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence            57789999997666678999999999999999999999996542          23445555655655444433221111


Q ss_pred             HH---hhcCC-----CCCCc-hhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           72 EL---LHSLP-----QCEPA-DLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        72 ~~---~~~~~-----~~~~~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      .+   ...+.     +.... .........+..+.+|+.+||..||.+|||++|+++||||
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         257 EYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             cchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            11   00000     00000 0011112245668899999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.87  E-value=5.6e-22  Score=137.26  Aligned_cols=125  Identities=34%  Similarity=0.508  Sum_probs=86.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCcc-chHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGAN-YISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   79 (142)
                      +|..|+|||.+.+...++.++|+||+||++++|++|+.||.+. ....+..+...++.+......... ...........
T Consensus       166 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  245 (372)
T cd07853         166 VTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPH  245 (372)
T ss_pred             cCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCC
Confidence            5778999999777667899999999999999999999999877 445556666666654433221111 01111111111


Q ss_pred             CCC--chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           80 CEP--ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        80 ~~~--~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                      ...  ..........+.++.+||.+||..||++|||+.++++||||...
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         246 KPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             CCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence            111  11112234467889999999999999999999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.87  E-value=1.2e-21  Score=133.49  Aligned_cols=138  Identities=36%  Similarity=0.591  Sum_probs=102.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCC--CccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWP--GANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~   78 (142)
                      +|..|+|||.+.+...++.++|+||+|+++++|++|..||.+.. ......+....+.+....+.  .......+.....
T Consensus       168 ~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (330)
T cd07834         168 VTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLP  247 (330)
T ss_pred             cccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcc
Confidence            46779999996655478899999999999999999999998773 34445555555555444332  1222333444455


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccccccccccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTVHV  139 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~~~~~~~~  139 (142)
                      ..............+.++.+|+.+||..+|++||+++++++||||.+..+...........
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~~~~~~~~  308 (330)
T cd07834         248 KKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEPVAKPPF  308 (330)
T ss_pred             cCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccCCCCCCcc
Confidence            5555666666777899999999999999999999999999999999887776655554443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.87  E-value=1e-21  Score=131.10  Aligned_cols=122  Identities=39%  Similarity=0.747  Sum_probs=90.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|+|||++.+...++.++|+||+|+++|+|++|+.||...+. .....+....+.+....++.......+...++..
T Consensus       161 ~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T cd07835         161 VTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKW  240 (283)
T ss_pred             cccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccc
Confidence            366799999866655678899999999999999999999976633 3334444544544444444444444444555554


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ............+.++.+++.+||+.+|.+||+++++++|+||
T Consensus       241 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         241 ARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             cccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            4445555566788899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.87  E-value=1.3e-21  Score=133.77  Aligned_cols=139  Identities=34%  Similarity=0.511  Sum_probs=98.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCc--cchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGA--NYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (142)
                      +|..|+|||.+.....++.++|+||+|+++++|++|+.||.+.+. .....+....+.+........  .....+....+
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (337)
T cd07858         170 VTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLP  249 (337)
T ss_pred             cccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcC
Confidence            567899999966555688999999999999999999999976633 344445555555444332111  11122223333


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcccccccccccC
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTVHVN  140 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~~~~~~~~~  140 (142)
                      ..............+.++.+|+.+||+.+|++||+++++++||||..+.+.......+..+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~~~~~~~~~  311 (337)
T cd07858         250 YTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEPVCQTPFS  311 (337)
T ss_pred             cccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccCccCCCccc
Confidence            33333444455678899999999999999999999999999999998877766666555443

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.86  E-value=1.3e-21  Score=135.14  Aligned_cols=127  Identities=26%  Similarity=0.434  Sum_probs=83.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccc-hHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANY-ISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (142)
                      ||..|+|||++.+ ..++.++|+||+||++|+|++|+.||.+. .......++..++.+.+........ ...+....+.
T Consensus       187 ~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (364)
T cd07875         187 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK  265 (364)
T ss_pred             ccCCcCCHHHHhC-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCC
Confidence            6788999999654 47899999999999999999999999776 3344555555555544332211110 0111111111


Q ss_pred             CCCchhH------------hhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           80 CEPADLA------------EKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        80 ~~~~~~~------------~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      .......            ......+.++++||.+||..||++|||++++++||||..+.+.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~  327 (364)
T cd07875         266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP  327 (364)
T ss_pred             cCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCc
Confidence            1111111            1112245678999999999999999999999999999864433

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.86  E-value=1.4e-21  Score=130.55  Aligned_cols=123  Identities=35%  Similarity=0.663  Sum_probs=90.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHh-hcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELL-HSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   79 (142)
                      ||..|+|||.+.+...++.++|+||+|+++++|++|.++|.+. .......+....+.+....++......... ..+..
T Consensus       162 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T cd07832         162 ATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPE  241 (286)
T ss_pred             CcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCC
Confidence            5678999999766666789999999999999999998888665 445555666666655544444333222221 12233


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                      .....+.+.....+.++.+|+.+||..+|++||+++++++||||.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         242 SKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             CCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence            333344555567788999999999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.86  E-value=2.5e-21  Score=129.97  Aligned_cols=126  Identities=48%  Similarity=0.797  Sum_probs=95.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|++||.+.+...++.++|+||+|+++++|++|..||... .......+....+.+....+........+....+..
T Consensus       165 ~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (294)
T PLN00009        165 VTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKW  244 (294)
T ss_pred             eeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccC
Confidence            4577999998766667889999999999999999999999766 344555555666665555554444444444444433


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ............+.++.+++.+||..+|++||++.++++|+||.++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~  291 (294)
T PLN00009        245 PPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG  291 (294)
T ss_pred             CCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence            33444444566888999999999999999999999999999999875

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.86  E-value=2.8e-21  Score=132.09  Aligned_cols=131  Identities=31%  Similarity=0.516  Sum_probs=91.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCcc--chHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGAN--YISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   78 (142)
                      ||..|+|||.+.+...++.++|+||+|+++++|++|+.||.+... .....+...++.+.........  ....+....+
T Consensus       171 ~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (336)
T cd07849         171 ATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLP  250 (336)
T ss_pred             cCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcC
Confidence            577899999866666789999999999999999999999976633 3444455555544333221111  1111222333


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHL  132 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~  132 (142)
                      ..............+.++.+++.+||+.+|++||++.++++||||....+....
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~~  304 (336)
T cd07849         251 FKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDE  304 (336)
T ss_pred             cCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCCc
Confidence            333333444455678899999999999999999999999999999987665443

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.86  E-value=2.5e-21  Score=130.65  Aligned_cols=122  Identities=39%  Similarity=0.632  Sum_probs=86.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhh-cCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLH-SLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   79 (142)
                      +|..|+|||.+.+...++.++|+||+|+++++|++|++||.+. .......+....+.+.+..++.......... ....
T Consensus       188 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (311)
T cd07866         188 VTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFT  267 (311)
T ss_pred             eccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCC
Confidence            3667999998766667889999999999999999999999766 4444555666555554444332222222111 1112


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      .........+.....++.+|+.+||..||.+|||+.+++.||||
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         268 NYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             CCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            22233344455667889999999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.86  E-value=3e-21  Score=128.90  Aligned_cols=122  Identities=40%  Similarity=0.770  Sum_probs=90.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|++||.+.+...++.++|+||+|+++++|++|+.||.+. .......+......+....+........+...++..
T Consensus       162 ~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd07836         162 VTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRY  241 (284)
T ss_pred             ccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCC
Confidence            4677999999766666889999999999999999999999876 444455555555554444333333333333444444


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ............+..+++++.+||+.||.+||+++++++||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         242 PPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             ChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            4444444555678899999999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.86  E-value=1.4e-21  Score=130.32  Aligned_cols=122  Identities=30%  Similarity=0.500  Sum_probs=81.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||.+.....++.++|+||+||++++|++|..||.+.+. .....+....+.+.................++..
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (282)
T cd07831         160 STRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSK  239 (282)
T ss_pred             CCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCccc
Confidence            467899999866665788899999999999999999999976633 3334444433332221100000000001112222


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ............+.++++++.+||.++|++||+++++++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         240 KGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             ccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            2223334445678999999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.86  E-value=3.3e-21  Score=130.32  Aligned_cols=125  Identities=35%  Similarity=0.620  Sum_probs=87.2

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHH-hhcCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISEL-LHSLPQC   80 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   80 (142)
                      +..|+|||.+.+...++.++|+||+|+++|+|++|..||.... ......+....+.+....++........ ...+...
T Consensus       171 ~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (309)
T cd07845         171 TLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQ  250 (309)
T ss_pred             cccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCC
Confidence            5679999997666678999999999999999999999998663 3455556665555544443322111110 0011111


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ............+.++.+||.+||+.||++|||++++++||||.+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~  297 (309)
T cd07845         251 PYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP  297 (309)
T ss_pred             CCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence            12222333444688899999999999999999999999999998654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.86  E-value=3.3e-21  Score=131.63  Aligned_cols=134  Identities=31%  Similarity=0.517  Sum_probs=100.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCc--cchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGA--NYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (142)
                      +|..|++||.+.+...++.++|+||+|+++++|++|+.||.+.. ...+..+....+.++.......  ....+....++
T Consensus       173 ~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  252 (334)
T cd07855         173 ATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLP  252 (334)
T ss_pred             ccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcc
Confidence            46789999996655568899999999999999999999997763 3445555666666554443221  22233344455


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccccccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVK  135 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~~~~  135 (142)
                      ......+.......+.++.++|.+||+.+|.+||++++++.||||............
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~~~~~  309 (334)
T cd07855         253 RKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDDEPTC  309 (334)
T ss_pred             cCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcccccC
Confidence            555555556667789999999999999999999999999999999987766655444

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.86  E-value=2.2e-21  Score=133.68  Aligned_cols=126  Identities=27%  Similarity=0.471  Sum_probs=82.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCcc-chHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGAN-YISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   79 (142)
                      ||..|+|||++. ...++.++|+||+||++|+|++|..||.+. ....+..+...++.+......... ....+....+.
T Consensus       184 ~t~~y~aPE~~~-~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (359)
T cd07876         184 VTRYYRAPEVIL-GMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQ  262 (359)
T ss_pred             ccCCCCCchhcc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCC
Confidence            578899999965 447889999999999999999999999866 334445555554443322111100 01111111111


Q ss_pred             CCCchhH------------hhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           80 CEPADLA------------EKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        80 ~~~~~~~------------~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                      .......            ......+.++++||.+||..||++|||++++++||||....+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~  323 (359)
T cd07876         263 YPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYD  323 (359)
T ss_pred             CCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcC
Confidence            1111111            111234677899999999999999999999999999985443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.86  E-value=4.9e-21  Score=133.34  Aligned_cols=127  Identities=21%  Similarity=0.232  Sum_probs=84.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC--------ChhHHHHHHHHhCCCCCCCCCCc-cchHH
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--------KKDHLSLIVRLFGNPTKETWPGA-NYISE   72 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   72 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||...        ....+..++...+..+....... .....
T Consensus       245 gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~  323 (391)
T PHA03212        245 GTIATNAPELLA-RDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDE  323 (391)
T ss_pred             CccCCCChhhhc-CCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHH
Confidence            789999999954 457899999999999999999998776432        22455666666665543322111 11111


Q ss_pred             Hh----h-cCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           73 LL----H-SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        73 ~~----~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ..    . .................+.++.+||.+||.+||++|||++++++||||..+...
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~  385 (391)
T PHA03212        324 IYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP  385 (391)
T ss_pred             HHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence            10    0 011111111112223456788999999999999999999999999999987544

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.85  E-value=6.3e-21  Score=127.98  Aligned_cols=122  Identities=41%  Similarity=0.777  Sum_probs=87.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +++.|+|||.+.+...++.++|+||+|+++|+|++|..||.+. .......+....+.+....++......... ..+..
T Consensus       173 ~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  251 (295)
T cd07837         173 VTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWH-EFPQW  251 (295)
T ss_pred             cccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchh-hcCcc
Confidence            3567999998766667889999999999999999999999766 334444455555544444433222222111 12233


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                      ............+.++.+||.+||.+||.+||++++++.||||.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         252 KPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             cchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence            33334444566889999999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.85  E-value=1.5e-21  Score=131.95  Aligned_cols=98  Identities=23%  Similarity=0.245  Sum_probs=78.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||-.|.|||++.+. +.+.++|.|+||+++|||+.|..||.+. ....+..++..--..+..                  
T Consensus       297 GThEYlAPEvI~G~-GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~------------------  357 (459)
T KOG0610|consen  297 GTHEYLAPEVIRGE-GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE------------------  357 (459)
T ss_pred             cccccccceeeecC-CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC------------------
Confidence            78899999996544 8999999999999999999999999988 444555554321111111                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCC----HHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT----ANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t----~~~~l~~~~~~~~~  127 (142)
                               +.++..++|||+++|.+||++|+.    |++|.+||||..+.
T Consensus       358 ---------~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVn  399 (459)
T KOG0610|consen  358 ---------PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVN  399 (459)
T ss_pred             ---------CcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCC
Confidence                     136789999999999999999998    99999999999753

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=3.8e-21  Score=132.45  Aligned_cols=96  Identities=25%  Similarity=0.269  Sum_probs=76.3

Q ss_pred             ccCcccchhhhcCCC-CCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSS-VYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~-~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+.. ..+.++||||+|++||.|++|..||...+...+...+.......+                   
T Consensus       183 Gsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p-------------------  243 (370)
T KOG0583|consen  183 GSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIP-------------------  243 (370)
T ss_pred             CCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCC-------------------
Confidence            899999999976654 345899999999999999999999987654444433322111111                   


Q ss_pred             CCchhHhhhcCC-CchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           81 EPADLAEKTHGL-EPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        81 ~~~~~~~~~~~~-~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                               ..+ +.++++|+++||..||.+|+++.++++|+||+.
T Consensus       244 ---------~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  244 ---------SYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             ---------CCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence                     125 889999999999999999999999999999996

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.85  E-value=3.9e-21  Score=131.73  Aligned_cols=128  Identities=34%  Similarity=0.483  Sum_probs=89.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCcc--chHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGAN--YISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   78 (142)
                      +|..|+|||.+.+...++.++|+||+|+++++|++|+.||.+.. ...+..+....+.+.+.......  ....+....+
T Consensus       176 ~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (342)
T cd07879         176 VTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLP  255 (342)
T ss_pred             eeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcC
Confidence            46779999997665568899999999999999999999998663 34444455444433222111110  1112222333


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ..............+.++.+||.+||+.||++||++++++.||||......
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~  306 (342)
T cd07879         256 KYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA  306 (342)
T ss_pred             CcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence            333444444555678889999999999999999999999999999987654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.85  E-value=8.2e-21  Score=130.19  Aligned_cols=131  Identities=35%  Similarity=0.564  Sum_probs=93.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCc--cchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGA--NYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (142)
                      +|..|++||.+.+...++.++|+||+|+++++|++|+.||.... ......+....+.+++......  .....+.....
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (343)
T cd07851         177 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLP  256 (343)
T ss_pred             ccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhcc
Confidence            46789999996655578899999999999999999999997663 3344444444443332221111  11223334444


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHL  132 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~  132 (142)
                      ..............+.++.+|+.+||..+|.+|||+.++++||||.+...+...
T Consensus       257 ~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~  310 (343)
T cd07851         257 QMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDE  310 (343)
T ss_pred             ccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCccc
Confidence            444445555556678999999999999999999999999999999987766543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.85  E-value=3.6e-22  Score=133.55  Aligned_cols=101  Identities=23%  Similarity=0.302  Sum_probs=74.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|||||++..+......+||||+||++.||++|+.||... ......+.........+                   
T Consensus       183 Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~~~~~~~ig~~~~~P-------------------  242 (313)
T KOG0198|consen  183 GTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FEEAEALLLIGREDSLP-------------------  242 (313)
T ss_pred             CCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cchHHHHHHHhccCCCC-------------------
Confidence            7999999999765323445999999999999999999999642 11111122221111111                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                           .....++.++++||.+|+.++|++||||+++|+|||.....
T Consensus       243 -----~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  243 -----EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS  283 (313)
T ss_pred             -----CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence                 22244889999999999999999999999999999997644

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.85  E-value=1.6e-21  Score=136.67  Aligned_cols=96  Identities=26%  Similarity=0.288  Sum_probs=78.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|||||++. +..|+..+|.||+||++||++.|++||......++...+..-...++                    
T Consensus       162 GtPlYmAPElv~-e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p--------------------  220 (808)
T KOG0597|consen  162 GTPLYMAPELVE-EQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP--------------------  220 (808)
T ss_pred             CcccccCHHHHc-CCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc--------------------
Confidence            899999999955 56999999999999999999999999986655555443331111111                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                              ..++..++.|+.++|.+||.+|++..+++.|||++..
T Consensus       221 --------~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  221 --------STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             --------ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence                    1378899999999999999999999999999999853

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.85  E-value=1.4e-20  Score=129.03  Aligned_cols=132  Identities=27%  Similarity=0.431  Sum_probs=85.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCc-cchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGA-NYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (142)
                      +|..|+|||.+.+...++.++|+||+||++|+|++|+.||..... .....+............... ............
T Consensus       180 ~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (342)
T cd07854         180 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGG  259 (342)
T ss_pred             ccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhccc
Confidence            467899999866666788999999999999999999999976633 222222222111111110000 000111111111


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccccc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLY  133 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~~  133 (142)
                      ....+........+.++.+|+.+||+.||.+||++.++++||||+.+..+....
T Consensus       260 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~~~~~  313 (342)
T cd07854         260 EPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCPFDEP  313 (342)
T ss_pred             ccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccCCcccc
Confidence            222333444566888999999999999999999999999999998765554433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=2.9e-21  Score=131.72  Aligned_cols=116  Identities=22%  Similarity=0.228  Sum_probs=84.0

Q ss_pred             ccCcccchhhhcC-CCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRIC-SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~-~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||++|||||+++. ..+|+.++||||||++..||+.|..||....+ ..+.  ....+.++........           
T Consensus       192 gtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl--~tLqn~pp~~~t~~~~-----------  258 (516)
T KOG0582|consen  192 GTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLL--LTLQNDPPTLLTSGLD-----------  258 (516)
T ss_pred             CcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHH--HHhcCCCCCcccccCC-----------
Confidence            7899999999654 46799999999999999999999999975532 2221  2222332211111000           


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcccccccc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKT  136 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~~~~~  136 (142)
                            .+..+..+..+++++..||..||.+||||+++++|+||+....+...+...
T Consensus       259 ------~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~~~~~~~~  309 (516)
T KOG0582|consen  259 ------KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSKEYLVKKL  309 (516)
T ss_pred             ------hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccchhhcchhh
Confidence                  011233566899999999999999999999999999999987776665443

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.85  E-value=6.3e-21  Score=131.24  Aligned_cols=126  Identities=28%  Similarity=0.446  Sum_probs=82.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCcc-chHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGAN-YISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   79 (142)
                      ||..|+|||++. ...++.++|+||+||++|+|++|+.||.+.. ......++..++.+......... ....+....+.
T Consensus       180 ~t~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (355)
T cd07874         180 VTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK  258 (355)
T ss_pred             ccCCccCHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCc
Confidence            678899999965 4478999999999999999999999997763 34445555555544332211111 01111111111


Q ss_pred             CCCch------------hHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           80 CEPAD------------LAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        80 ~~~~~------------~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                      .....            ........+.++++||.+||..||++|||+.++++||||....+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~  319 (355)
T cd07874         259 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYD  319 (355)
T ss_pred             cccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccC
Confidence            00000            01111224567899999999999999999999999999985543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.84  E-value=1.8e-20  Score=130.66  Aligned_cols=127  Identities=18%  Similarity=0.222  Sum_probs=84.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC----ChhHHHHHHHHhCCCCCCCCCCcc-chHHHhhc
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG----KKDHLSLIVRLFGNPTKETWPGAN-YISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   76 (142)
                      ||..|+|||++. ...++.++|+||+||++|+|++|+.||.+.    ....+..++..++..+........ ........
T Consensus       249 gt~~y~aPE~~~-~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~  327 (392)
T PHA03207        249 GTLETNSPELLA-LDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQ  327 (392)
T ss_pred             cccCccCHhHhc-CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHh
Confidence            688999999954 457899999999999999999999999765    234555666665554433222111 11111111


Q ss_pred             CCC--CCCchhHhh--hcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           77 LPQ--CEPADLAEK--THGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        77 ~~~--~~~~~~~~~--~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      +..  .........  ...++.++.+||.+||..||++||++.++++||||......
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~  384 (392)
T PHA03207        328 YAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPIN  384 (392)
T ss_pred             hcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccchh
Confidence            110  000011111  12456788999999999999999999999999999875443

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=4.4e-21  Score=136.26  Aligned_cols=96  Identities=20%  Similarity=0.338  Sum_probs=77.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|||||++. +..|+.++|.|++|+++|||+.|++||.+.+. +....|...     ...+                
T Consensus       530 GTpey~aPEil~-e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d-----~~~y----------------  587 (694)
T KOG0694|consen  530 GTPEFLAPEVLT-EQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND-----EVRY----------------  587 (694)
T ss_pred             CChhhcChhhhc-cCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC-----CCCC----------------
Confidence            899999999954 55999999999999999999999999998844 445555431     1111                


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCH-----HHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA-----NDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~-----~~~l~~~~~~~~~  127 (142)
                              ...++.++.++++++|.++|++|+.+     ++|.+||||+.+.
T Consensus       588 --------P~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~  631 (694)
T KOG0694|consen  588 --------PRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID  631 (694)
T ss_pred             --------CCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCC
Confidence                    12388999999999999999999964     6899999999753

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.84  E-value=5.8e-21  Score=119.52  Aligned_cols=102  Identities=16%  Similarity=0.174  Sum_probs=70.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh--hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.....  .....+............               
T Consensus        66 g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------------  129 (176)
T smart00750       66 VDPYFMAPEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDR---------------  129 (176)
T ss_pred             CcccccChHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcccc---------------
Confidence            6889999999654 4789999999999999999999999964421  122222221111000000               


Q ss_pred             CCCchhHhhhcCCC--chHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           80 CEPADLAEKTHGLE--PSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        80 ~~~~~~~~~~~~~~--~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                         ...    ....  .++.+++.+||..+|.+||++.++++|+|+...
T Consensus       130 ---~~~----~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~  171 (176)
T smart00750      130 ---SNL----ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA  171 (176)
T ss_pred             ---ccH----HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence               000    0122  368999999999999999999999999987643

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.84  E-value=7e-21  Score=130.16  Aligned_cols=137  Identities=30%  Similarity=0.491  Sum_probs=94.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCc--cchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGA--NYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (142)
                      ||..|++||.+.+...++.++|+||+|+++++|++|+.||.+. .......+....+.+........  ...........
T Consensus       174 ~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (337)
T cd07852         174 ATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLP  253 (337)
T ss_pred             ccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcc
Confidence            5678999998666667889999999999999999999999766 33444444444443332211110  01111222333


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcccccccccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTVH  138 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~~~~~~~  138 (142)
                      ..............+.++.+++.+||+.+|++||++.++++|+|+..............+
T Consensus       254 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~~~~~~~~  313 (337)
T cd07852         254 SRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSDEPVLPYP  313 (337)
T ss_pred             cccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCCCCCCCCC
Confidence            344444555556688999999999999999999999999999999987665544433333

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.84  E-value=2.6e-20  Score=127.27  Aligned_cols=125  Identities=34%  Similarity=0.603  Sum_probs=90.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|++||.+.+...++.++|+||+||++++|++|..||.+. .......+....+.+....++.......+.. +...
T Consensus       195 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~  273 (335)
T PTZ00024        195 VTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTE-FTPR  273 (335)
T ss_pred             cccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccc-cCcC
Confidence            4677999999766656889999999999999999999999766 3445555666666655544433222211111 1112


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ............+.++.+++.+||..+|++||++++++.|+||+...
T Consensus       274 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~  320 (335)
T PTZ00024        274 KPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP  320 (335)
T ss_pred             CcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence            22333344456788899999999999999999999999999999664

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=5.9e-21  Score=133.21  Aligned_cols=100  Identities=21%  Similarity=0.299  Sum_probs=70.6

Q ss_pred             ccCcccchhhhcCCC----------CCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchH
Q 048170            2 VEFPYKAPESRICSS----------VYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYIS   71 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~----------~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (142)
                      ||+.||+||.+....          ..+.++||||+||+||+|+.|+.||... ...++.+....++.....++..    
T Consensus       523 GT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-~n~~aKl~aI~~P~~~Iefp~~----  597 (677)
T KOG0596|consen  523 GTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-INQIAKLHAITDPNHEIEFPDI----  597 (677)
T ss_pred             CcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-HHHHHHHHhhcCCCccccccCC----
Confidence            899999999875321          2567899999999999999999999533 1123333222222111111110    


Q ss_pred             HHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           72 ELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                               .          -..++.++++.||.+||++|+++.++|+|||+.-
T Consensus       598 ---------~----------~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  598 ---------P----------ENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             ---------C----------CchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence                     0          1224899999999999999999999999999885

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.84  E-value=3.7e-21  Score=130.92  Aligned_cols=96  Identities=23%  Similarity=0.312  Sum_probs=75.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||...........+.....                       
T Consensus       157 gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-----------------------  212 (323)
T cd05571         157 GTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-----------------------  212 (323)
T ss_pred             cCccccChhhhc-CCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence            788999999954 45789999999999999999999999976654433332211000                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                           .....++.++.+||.+||..||++|+     ++.++++|+||..+
T Consensus       213 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         213 -----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             -----CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence                 00123678899999999999999999     89999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.84  E-value=2.9e-20  Score=123.96  Aligned_cols=122  Identities=39%  Similarity=0.636  Sum_probs=89.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccc-hHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANY-ISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (142)
                      ++..|++||.+.+...++.++|+||+|+++|+|++|+.+|... ..+....+...++.+....+..... .......++.
T Consensus       160 ~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd05118         160 VTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPK  239 (283)
T ss_pred             CcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhcc
Confidence            4567999999765557889999999999999999999999766 3344555555555554444333322 1222233333


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      .............+.++.+||.+||.+||.+||++.++++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         240 KAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             ccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            34444455556788999999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.84  E-value=1.6e-20  Score=125.11  Aligned_cols=121  Identities=41%  Similarity=0.787  Sum_probs=88.6

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+.+...++.++|+||+|++++++++|..||... .......+.+..+.+....+........+...++...
T Consensus       161 ~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (282)
T cd07829         161 TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFP  240 (282)
T ss_pred             CcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccC
Confidence            567999999665557889999999999999999999999766 3445555666655554444333322222233333333


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      .......++..+..+.+++.+||..||++||++++++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         241 PKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             ccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            444445555668889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=1.6e-20  Score=126.08  Aligned_cols=96  Identities=23%  Similarity=0.195  Sum_probs=73.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|+.||...........+.....                       
T Consensus       160 gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-----------------------  215 (291)
T cd05612         160 GTPEYLAPEVIQ-SKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL-----------------------  215 (291)
T ss_pred             CChhhcCHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc-----------------------
Confidence            688999999954 45789999999999999999999999976644333222211000                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~  126 (142)
                           ......+..+++|+++||..||.+|++     ++++++|+||..+
T Consensus       216 -----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  260 (291)
T cd05612         216 -----EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV  260 (291)
T ss_pred             -----CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence                 001235778899999999999999995     9999999999854

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.84  E-value=1.8e-20  Score=125.73  Aligned_cols=122  Identities=37%  Similarity=0.668  Sum_probs=81.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHh-hcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELL-HSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   79 (142)
                      ++..|+|||.+.+...++.++|+||+|+++++|++|..||... .......+....+.+....++......... .....
T Consensus       168 ~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (293)
T cd07843         168 VTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTK  247 (293)
T ss_pred             ccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhccccccc
Confidence            4667999999766656789999999999999999999999866 333444455555544433322211111111 11111


Q ss_pred             CCCchhHhhhcC--CCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           80 CEPADLAEKTHG--LEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        80 ~~~~~~~~~~~~--~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      .........+..  ++....++|.+||+.+|++||+++++++|+||
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         248 YPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             ccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence            112222222333  47888999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.83  E-value=1.1e-20  Score=126.52  Aligned_cols=101  Identities=20%  Similarity=0.278  Sum_probs=75.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH-HHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++. ...++.++||||+||++|+|++|+.||....... ...+........                    
T Consensus       163 g~~~y~aPE~~~-~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------------  221 (285)
T cd05631         163 GTVGYMAPEVIN-NEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ--------------------  221 (285)
T ss_pred             CCCCccCHhhhc-CCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc--------------------
Confidence            688999999965 4488999999999999999999999997653221 111111111000                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccchhh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKLLA  128 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~~~  128 (142)
                           .......+.++.+|+.+||..||.+|++     ++++++||||.++..
T Consensus       222 -----~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~  269 (285)
T cd05631         222 -----EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF  269 (285)
T ss_pred             -----ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence                 0112346788999999999999999997     899999999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.83  E-value=2.4e-20  Score=126.23  Aligned_cols=122  Identities=34%  Similarity=0.606  Sum_probs=80.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh----------hHHHHHHHHhCCCCCCCCCCccchH
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK----------DHLSLIVRLFGNPTKETWPGANYIS   71 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~   71 (142)
                      +|..|+|||.+.+...++.++|+||+|+++++|++|..||.+...          ..+..+...++.+....+.......
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  256 (316)
T cd07842         177 VTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMP  256 (316)
T ss_pred             ccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcc
Confidence            467799999877666789999999999999999999999975522          2334444444443333221111111


Q ss_pred             HHhh---c-----CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           72 ELLH---S-----LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        72 ~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      .+..   .     +.........+.....+.++.+++.+||..||++|||+.++++||||
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         257 EYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             cchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            1111   0     11111111122223577889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.83  E-value=1.5e-20  Score=127.77  Aligned_cols=96  Identities=23%  Similarity=0.280  Sum_probs=74.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||...........+.....   .                   
T Consensus       158 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~---~-------------------  214 (320)
T cd05590         158 GTPDYIAPEILQ-EMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV---V-------------------  214 (320)
T ss_pred             cCccccCHHHHc-CCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC---C-------------------
Confidence            688999999954 45788999999999999999999999976654433222211000   0                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH------HHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA------NDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~------~~~l~~~~~~~~  126 (142)
                            .....+.++.+|+.+||..||.+|+++      +++++||||..+
T Consensus       215 ------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         215 ------YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             ------CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence                  012267789999999999999999998      899999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.83  E-value=4.8e-20  Score=123.58  Aligned_cols=122  Identities=39%  Similarity=0.711  Sum_probs=84.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC--hhHHHHHHHHhCCCCCCCCCCccchHHHh-hcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKETWPGANYISELL-HSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   78 (142)
                      ++..|+|||.+.+...++.++|+||+|+++++|++|..||....  ......+....+.+....++.......+. ....
T Consensus       165 ~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (291)
T cd07844         165 VTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFP  244 (291)
T ss_pred             cccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccccc
Confidence            45679999997666678899999999999999999999996553  34445555555554444433222211111 1112


Q ss_pred             CCCCchhHhhhcCCC--chHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           79 QCEPADLAEKTHGLE--PSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~--~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ...............  .++.+++.+||..+|.+||++.++++|+||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         245 FYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             ccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            222233334444455  788999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.83  E-value=4e-20  Score=126.24  Aligned_cols=128  Identities=28%  Similarity=0.480  Sum_probs=91.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCc--cchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGA--NYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (142)
                      ||..|+|||.+.+...++.++|+||+|+++++|++|.+||... ....+..+...++.++.......  .....+.....
T Consensus       171 g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (332)
T cd07857         171 ATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLP  250 (332)
T ss_pred             cCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhcc
Confidence            5778999998666567889999999999999999999999766 34455556666665443221111  11112222233


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ..............+..+.+|+.+||+.||++||++.+++.|||++.+.++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~  301 (332)
T cd07857         251 NIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDP  301 (332)
T ss_pred             ccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCc
Confidence            333334444445578889999999999999999999999999999877654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=2.2e-20  Score=132.99  Aligned_cols=103  Identities=17%  Similarity=0.248  Sum_probs=77.9

Q ss_pred             ccCcccchhhhcC----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRIC----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||++|||||+.++    ...|+..+||||+|++|.||+.+.+|.+.-+.  ...++.....-++...             
T Consensus       192 GTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp--MRVllKiaKSePPTLl-------------  256 (1187)
T KOG0579|consen  192 GTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP--MRVLLKIAKSEPPTLL-------------  256 (1187)
T ss_pred             CCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch--HHHHHHHhhcCCCccc-------------
Confidence            8999999999765    34799999999999999999999998864433  2222222221111110             


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                                ..+.++..+.||+.+||..||..||+++++++||||.++..+
T Consensus       257 ----------qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~Sn  298 (1187)
T KOG0579|consen  257 ----------QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSN  298 (1187)
T ss_pred             ----------CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcc
Confidence                      123478899999999999999999999999999999976443

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.83  E-value=4.6e-20  Score=126.63  Aligned_cols=132  Identities=34%  Similarity=0.517  Sum_probs=91.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCcc--chHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGAN--YISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   78 (142)
                      +|..|+|||.+.+...++.++|+||+||++++|++|+.||.... ......+....+.+.........  ....+...++
T Consensus       179 ~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (345)
T cd07877         179 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT  258 (345)
T ss_pred             cCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhc
Confidence            56789999996665578889999999999999999999997653 33344444444433332221111  1122223333


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLY  133 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~~  133 (142)
                      ..............+.++.+||.+||+.||.+|+++.++++||||.+...+....
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~~~  313 (345)
T cd07877         259 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEP  313 (345)
T ss_pred             ccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCccc
Confidence            3333333344445788899999999999999999999999999999876665554

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.83  E-value=3e-20  Score=126.20  Aligned_cols=97  Identities=21%  Similarity=0.291  Sum_probs=74.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++. ...++.++|+||+||++|+|++|..||...........+.......                     
T Consensus       158 gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~---------------------  215 (316)
T cd05619         158 GTPDYIAPEILL-GQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCY---------------------  215 (316)
T ss_pred             CCccccCHHHHc-CCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC---------------------
Confidence            688999999955 4478999999999999999999999997665443332222111000                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHH-HHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN-DALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~-~~l~~~~~~~~~  127 (142)
                             ....+.++.+|+.+||..||++|+++. ++++||||..+.
T Consensus       216 -------~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~  255 (316)
T cd05619         216 -------PRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID  255 (316)
T ss_pred             -------CccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence                   012677889999999999999999996 899999998753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.83  E-value=4.6e-20  Score=125.95  Aligned_cols=120  Identities=20%  Similarity=0.262  Sum_probs=76.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCC----CCCc----------
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKET----WPGA----------   67 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----------   67 (142)
                      ||..|+|||++. ...++.++|+||+||++|+|++|+.||.......+..++.   .+....    ....          
T Consensus       164 g~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  239 (331)
T cd06649         164 GTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFG---RPVVDGEEGEPHSISPRPRPPGRP  239 (331)
T ss_pred             CCcCcCCHhHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhc---ccccccccCCccccCccccccccc
Confidence            678999999955 4478999999999999999999999997665444333221   111000    0000          


Q ss_pred             -----------cchHHHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           68 -----------NYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        68 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                                 .........+.+......  .....+.++++||.+||..||++|||++++++||||....
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  308 (331)
T cd06649         240 VSGHGMDSRPAMAIFELLDYIVNEPPPKL--PNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE  308 (331)
T ss_pred             ccccccccccchhHHHHHHHHHhCCCcCC--CCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence                       000000000000000000  0123677899999999999999999999999999998654

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.83  E-value=4.9e-21  Score=125.92  Aligned_cols=122  Identities=29%  Similarity=0.482  Sum_probs=90.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCc-cchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGA-NYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (142)
                      +|++|+|||++.+- .+...+||||+||++.||+.|...|.+. ..+++-++++.+|.+.+...... .....+....++
T Consensus       179 vtRyyrapevil~~-~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~  257 (369)
T KOG0665|consen  179 VTRYYRAPEVILGM-GYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQ  257 (369)
T ss_pred             heeeccCchheecc-CCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChH
Confidence            57899999997655 5999999999999999999999999877 67888899999998776643321 111222222222


Q ss_pred             CCCchhH------------hhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           80 CEPADLA------------EKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        80 ~~~~~~~------------~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                      .......            +..+.-..-+++++.+||..||++|.+++++|+|||++
T Consensus       258 y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  258 YQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             hhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence            2222222            22223445678999999999999999999999999997

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.83  E-value=4.4e-20  Score=124.11  Aligned_cols=126  Identities=31%  Similarity=0.545  Sum_probs=87.2

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+.+...++.++|+||+||++++|++|.++|... .......+...++.+....++......... ......
T Consensus       165 ~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  243 (298)
T cd07841         165 TRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV-EFKPFP  243 (298)
T ss_pred             ceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc-cccccC
Confidence            567999998766667889999999999999999998888655 334444444444444333332221111111 111222


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      .......+...+.++.+|+.+||..+|++||+++++++|+||.+....
T Consensus       244 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~  291 (298)
T cd07841         244 PTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAP  291 (298)
T ss_pred             CcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCC
Confidence            233344456678899999999999999999999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.82  E-value=3.1e-20  Score=126.10  Aligned_cols=96  Identities=20%  Similarity=0.262  Sum_probs=73.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++. ...++.++|+||+||++|+|++|..||...........+.....   .                   
T Consensus       158 gt~~y~aPE~~~-~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~---~-------------------  214 (316)
T cd05620         158 GTPDYIAPEILQ-GLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTP---H-------------------  214 (316)
T ss_pred             CCcCccCHHHHc-CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---C-------------------
Confidence            688999999955 44789999999999999999999999976654433332221110   0                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH-HHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA-NDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~-~~~l~~~~~~~~  126 (142)
                            .....+.++++|+.+||..||++|+++ +++++||||...
T Consensus       215 ------~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         215 ------YPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             ------CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence                  011267789999999999999999997 588899999865

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.82  E-value=2.3e-20  Score=131.73  Aligned_cols=91  Identities=25%  Similarity=0.381  Sum_probs=73.7

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      |..|.|||++ ....|+.++|+||+|++||+|++|+.||......  ..+...++.+.-.                    
T Consensus       476 t~~y~APEvl-~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~~~i~~~~~s--------------------  532 (612)
T KOG0603|consen  476 TLQYVAPEVL-AIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIHTRIQMPKFS--------------------  532 (612)
T ss_pred             hhcccChhhh-ccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHHHhhcCCccc--------------------
Confidence            6789999995 4779999999999999999999999999877333  2222222221111                    


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                             ..++.++++||.+||+.||.+|+++.++..|+|+
T Consensus       533 -------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  533 -------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             -------cccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence                   2389999999999999999999999999999999

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.82  E-value=4.9e-20  Score=125.57  Aligned_cols=125  Identities=19%  Similarity=0.168  Sum_probs=75.3

Q ss_pred             ccCcccchhhhcCC-CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHH--------
Q 048170            2 VEFPYKAPESRICS-SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISE--------   72 (142)
Q Consensus         2 ~t~~y~~PE~~~~~-~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------   72 (142)
                      ++..|+|||++.+. ..++.++|+||+||++++|++|+.||............ ..+..+............        
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (327)
T cd08227         170 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK-LNGTVPCLLDTTTIPAEELTMKPSRS  248 (327)
T ss_pred             ceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHH-hcCCccccccccchhhhhcccCCccc
Confidence            34569999996543 46889999999999999999999999755322211111 111110000000000000        


Q ss_pred             -----Hhh------cCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           73 -----LLH------SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        73 -----~~~------~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                           ...      ..+..............+.++.+|+.+||+.||++|||++++++||||+++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~  314 (327)
T cd08227         249 GANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  314 (327)
T ss_pred             CCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence                 000      0000000111112234677889999999999999999999999999998764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=3.5e-21  Score=137.99  Aligned_cols=103  Identities=21%  Similarity=0.284  Sum_probs=78.4

Q ss_pred             ccCcccchhhhc-CCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRI-CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~-~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|||||++- |..+|+.++|||||||++.||++|++||..-.. +.....+..+..-++                  
T Consensus       738 GTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~------------------  799 (1226)
T KOG4279|consen  738 GTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPP------------------  799 (1226)
T ss_pred             cchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCC------------------
Confidence            899999999964 346799999999999999999999999965533 222222222111111                  


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                              ...+++.+++.||.+|+.+||..||+|.++|.+||+..-..+.
T Consensus       800 --------iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~kk~  842 (1226)
T KOG4279|consen  800 --------IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNNKKP  842 (1226)
T ss_pred             --------CcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCCCCC
Confidence                    1134788999999999999999999999999999998764443

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.82  E-value=1.9e-20  Score=127.75  Aligned_cols=96  Identities=18%  Similarity=0.124  Sum_probs=73.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||.+.........+....   ..                   
T Consensus       177 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~---~~-------------------  233 (329)
T PTZ00263        177 GTPEYLAPEVIQ-SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGR---LK-------------------  233 (329)
T ss_pred             CChhhcCHHHHc-CCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC---cC-------------------
Confidence            688999999954 4478899999999999999999999997654433322221100   00                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~  126 (142)
                            ....++.++++|+.+||..||.+|++     ++++++||||.+.
T Consensus       234 ------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        234 ------FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             ------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence                  01225678899999999999999997     7999999999864

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.82  E-value=4.2e-20  Score=127.14  Aligned_cols=129  Identities=28%  Similarity=0.471  Sum_probs=83.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccc-hHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANY-ISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (142)
                      +|..|+|||.+.+ ..++.++|+||+||++++|++|+.||...+ ......+...++.++......... ...+...-+.
T Consensus       179 ~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (353)
T cd07850         179 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPK  257 (353)
T ss_pred             ccccccCHHHHhC-CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCC
Confidence            5678999999654 478999999999999999999999997663 344555555555543322111100 0011111111


Q ss_pred             CCCchhHhh-------------hcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccc
Q 048170           80 CEPADLAEK-------------THGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAH  131 (142)
Q Consensus        80 ~~~~~~~~~-------------~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~  131 (142)
                      .........             ....+.++++||.+||..||++||++.++++||||+.+.....
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~~~  322 (353)
T cd07850         258 YAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDPSE  322 (353)
T ss_pred             CCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCCcc
Confidence            111111111             1234567899999999999999999999999999986555433

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=2.4e-20  Score=126.38  Aligned_cols=96  Identities=23%  Similarity=0.330  Sum_probs=73.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||...........+.  .. +.                    
T Consensus       155 gt~~y~aPE~~~-~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~--~~-~~--------------------  210 (312)
T cd05585         155 GTPEYLAPELLL-GHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKIL--QE-PL--------------------  210 (312)
T ss_pred             CCcccCCHHHHc-CCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHH--cC-CC--------------------
Confidence            788999999955 4478999999999999999999999997664433222211  10 00                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC---CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV---TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~---t~~~~l~~~~~~~~  126 (142)
                           ......+.++++|+.+||..||++|+   ++.++++||||.+.
T Consensus       211 -----~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         211 -----RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             -----CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence                 01123678899999999999999997   58999999999975

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.82  E-value=4.1e-20  Score=125.60  Aligned_cols=96  Identities=22%  Similarity=0.260  Sum_probs=74.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++. ...++.++|+||+||++|+|++|+.||...........+.....   .                   
T Consensus       158 g~~~y~aPE~~~-~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~---~-------------------  214 (318)
T cd05570         158 GTPDYIAPEILS-YQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV---R-------------------  214 (318)
T ss_pred             cCccccCHHHhc-CCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC---C-------------------
Confidence            678899999965 44788999999999999999999999976654333222211000   0                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH-----HHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA-----NDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~-----~~~l~~~~~~~~  126 (142)
                            .....+.++.+||.+||..||++|+++     .++++||||..+
T Consensus       215 ------~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         215 ------YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             ------CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence                  012367789999999999999999999     999999999864

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.82  E-value=1.7e-19  Score=121.76  Aligned_cols=122  Identities=32%  Similarity=0.592  Sum_probs=80.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHh-hcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELL-HSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   79 (142)
                      ++..|+|||.+.+...++.++|+||+|+++|+|++|..+|.+... .....+....+..+...++.......+. ..++.
T Consensus       185 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (310)
T cd07865         185 VTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQ  264 (310)
T ss_pred             cCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCC
Confidence            356799999866655678899999999999999999999976633 3444455555544444333222111111 01111


Q ss_pred             CCCchhHhhh--cCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           80 CEPADLAEKT--HGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        80 ~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ..........  ...+..+.+||.+||..||.+||+++++++||||
T Consensus       265 ~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         265 GQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             ccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            1111111111  1245677899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.82  E-value=2.8e-20  Score=127.50  Aligned_cols=96  Identities=18%  Similarity=0.090  Sum_probs=73.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+ ..++.++|+||+||++|+|++|..||...........+.....                       
T Consensus       190 gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~-----------------------  245 (340)
T PTZ00426        190 GTPEYIAPEILLN-VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII-----------------------  245 (340)
T ss_pred             CChhhcCHHHHhC-CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC-----------------------
Confidence            6889999999654 4788999999999999999999999976644332222211000                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                           ......+.++.+++++||..||.+|+     +++++++||||.++
T Consensus       246 -----~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        246 -----YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             -----CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence                 00123677889999999999999996     89999999999865

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.82  E-value=8.1e-20  Score=126.09  Aligned_cols=100  Identities=25%  Similarity=0.302  Sum_probs=79.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||+ .....|+..+|+||+|+++|.|++|.+||.+.........+.....                       
T Consensus       200 Gtp~y~APEv-l~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~-----------------------  255 (382)
T KOG0032|consen  200 GTPEYVAPEV-LGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF-----------------------  255 (382)
T ss_pred             CCccccCchh-hcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC-----------------------
Confidence            8999999999 4455999999999999999999999999987754443332221111                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                       .-..+.+..++..+++|+.++|..||.+|++++++|+|||+...
T Consensus       256 -~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  256 -DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             -CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence             01112235589999999999999999999999999999999875

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=3.6e-20  Score=120.43  Aligned_cols=86  Identities=22%  Similarity=0.310  Sum_probs=73.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||++||+||++. ..+|+.++||||+||++|||..-++||.+.+...+...+...+.++...                  
T Consensus       190 GTPyYMSPE~i~-~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~------------------  250 (375)
T KOG0591|consen  190 GTPYYMSPERIH-ESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPD------------------  250 (375)
T ss_pred             CCCcccCHHHHh-cCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcH------------------
Confidence            899999999955 4499999999999999999999999999988888888777665543332                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA  114 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~  114 (142)
                              ...++++..|+..|+..||+.||+.
T Consensus       251 --------~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  251 --------EHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             --------HHhhhHHHHHHHHHccCCcccCCCc
Confidence                    2378899999999999999999985

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.82  E-value=1.4e-19  Score=120.75  Aligned_cols=122  Identities=34%  Similarity=0.602  Sum_probs=85.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC-CC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSL-PQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   79 (142)
                      ++..|++||.+.+...++.++|+||+|+++++|++|+.||... .......+....+.+....++............ ..
T Consensus       163 ~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (287)
T cd07840         163 ITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKK  242 (287)
T ss_pred             cccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccc
Confidence            3567999998666667889999999999999999999999766 334455556655555555444332221111111 11


Q ss_pred             CCCchhHhhhcCC-CchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           80 CEPADLAEKTHGL-EPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        80 ~~~~~~~~~~~~~-~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ............. +.++.+++.+||..+|.+||+++++++|+||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         243 PYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             cchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence            1112222333443 8899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.82  E-value=1.5e-19  Score=120.76  Aligned_cols=121  Identities=28%  Similarity=0.501  Sum_probs=79.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHhh--cCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELLH--SLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~   78 (142)
                      ++..|++||.+.+...++.++|+||+|+++++|++|..||.+.. ......+....+........ ......+..  ..+
T Consensus       162 ~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  240 (286)
T cd07847         162 ATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQ-IFSTNQFFKGLSIP  240 (286)
T ss_pred             cccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhh-hcccccccccccCC
Confidence            45789999997666678899999999999999999999997663 23333333332221110000 000000000  011


Q ss_pred             -CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           79 -QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        79 -~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                       .....+........+..+.+|+.+||..+|++||++.+++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         241 EPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             CcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence             111222334456678899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.81  E-value=9.1e-20  Score=124.15  Aligned_cols=96  Identities=19%  Similarity=0.283  Sum_probs=73.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||.+. ...++.++|+||+||++|+|++|+.||.+.........+......                      
T Consensus       163 g~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~----------------------  219 (324)
T cd05589         163 GTPEFLAPEVLT-ETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVR----------------------  219 (324)
T ss_pred             cCccccCHhHhc-CCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC----------------------
Confidence            688999999955 447889999999999999999999999766443332221110000                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                            ....++.++.++|.+||..||.+||     ++.++++||||..+
T Consensus       220 ------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         220 ------YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             ------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence                  0123678889999999999999999     69999999999875

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.81  E-value=1.2e-19  Score=121.73  Aligned_cols=122  Identities=33%  Similarity=0.611  Sum_probs=80.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC--hhHHHHHHHHhCCCCCCCCCCccchHHHhhcC-C
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKETWPGANYISELLHSL-P   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   78 (142)
                      ++..|+|||.+.+...++.++|+||+|+++++|++|..||....  ...+..+....+.+....++.......+.... .
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (291)
T cd07870         165 VTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFL  244 (291)
T ss_pred             ccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhcc
Confidence            46789999996655568889999999999999999999997652  23444445555544433322222111111111 1


Q ss_pred             CCCCchhHhhhc--CCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           79 QCEPADLAEKTH--GLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        79 ~~~~~~~~~~~~--~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ............  ..+.++.+++.+||..||++|||+++++.||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         245 PCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             ccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            111111222121  135678999999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=1.3e-19  Score=124.85  Aligned_cols=124  Identities=22%  Similarity=0.283  Sum_probs=76.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCC-CCcCCCC----------hhHHHHHHHHhCCCCCCCC--CCcc
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK-PLFPCGK----------KDHLSLIVRLFGNPTKETW--PGAN   68 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~-~~~~~~~----------~~~~~~~~~~~~~~~~~~~--~~~~   68 (142)
                      ||..|+|||++.+ ..++.++|+||+||++|+|+++. .+|....          ...+..++..++..+....  +...
T Consensus       218 gt~~y~aPE~~~~-~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  296 (357)
T PHA03209        218 GTVETNAPEVLAR-DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSR  296 (357)
T ss_pred             ccccccCCeecCC-CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccH
Confidence            6889999999554 47899999999999999999754 4443321          1123333344443332221  1111


Q ss_pred             chHHHhhc--CCCCCCch-hHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           69 YISELLHS--LPQCEPAD-LAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        69 ~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                      ....+...  ........ ........+.++.+||.+||+.||.+|||++++++||||+++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~  357 (357)
T PHA03209        297 LVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL  357 (357)
T ss_pred             HHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence            11111110  00000000 001113467788899999999999999999999999999863

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.81  E-value=4.5e-20  Score=125.98  Aligned_cols=100  Identities=21%  Similarity=0.235  Sum_probs=72.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|..||..... .....+.........                   
T Consensus       168 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-------------------  228 (332)
T cd05614         168 GTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP-------------------  228 (332)
T ss_pred             CCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC-------------------
Confidence            688999999976555688899999999999999999999964311 111111111000000                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                            ......+..+++++.+||..||++|+     +++++++||||...
T Consensus       229 ------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         229 ------PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             ------CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence                  01123677899999999999999999     78899999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.81  E-value=5.2e-20  Score=125.18  Aligned_cols=96  Identities=22%  Similarity=0.273  Sum_probs=73.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++. ...++.++|+||+||++|+|++|+.||...........+......                      
T Consensus       158 gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~----------------------  214 (321)
T cd05591         158 GTPDYIAPEILQ-ELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVL----------------------  214 (321)
T ss_pred             cCccccCHHHHc-CCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------------------
Confidence            688999999954 447899999999999999999999999866443332222110000                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-------CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-------TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-------t~~~~l~~~~~~~~  126 (142)
                            .....+.++.+|+.+||..||++|+       +++++++||||..+
T Consensus       215 ------~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         215 ------YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             ------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence                  0012577899999999999999999       89999999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.81  E-value=2.2e-19  Score=119.97  Aligned_cols=122  Identities=30%  Similarity=0.418  Sum_probs=79.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHh-hcCC-
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELL-HSLP-   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-   78 (142)
                      ++..|++||.+.+...++.++|+||+|+++++|++|.++|.... ......+....+................. ...+ 
T Consensus       162 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T cd07846         162 ATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPE  241 (286)
T ss_pred             ceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcccccc
Confidence            45679999997665567889999999999999999999997553 33444444433322111100000000000 0011 


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ..............+..+.+|+.+||..+|++||+++++++|+||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         242 VKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             ccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            111222334456688899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=2.5e-19  Score=126.81  Aligned_cols=122  Identities=18%  Similarity=0.183  Sum_probs=78.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC--------ChhHHHHHHHHhCCCCCCCCCCc--cchH
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--------KKDHLSLIVRLFGNPTKETWPGA--NYIS   71 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~--~~~~   71 (142)
                      ||..|++||++.+ ..++.++||||+||++|||++|..++...        ....+..++...+..........  ....
T Consensus       324 GT~~Y~APE~~~~-~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~  402 (461)
T PHA03211        324 GTVDTNAPEVLAG-DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVS  402 (461)
T ss_pred             CCcCCcCHHHHcC-CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHH
Confidence            7899999999654 47899999999999999999887544222        12344555554443222211110  1111


Q ss_pred             HHhh-----cCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           72 ELLH-----SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        72 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                      .+..     ..+......+ ..+..++.++.+||.+||..||++|||++|+|+||||+.
T Consensus       403 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        403 QYRHRAARNRRPAYTRPAW-TRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             HHHhhhhcccCCccCCcch-hhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            1111     0111111112 222356778999999999999999999999999999975

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.81  E-value=1.5e-19  Score=120.65  Aligned_cols=122  Identities=36%  Similarity=0.635  Sum_probs=85.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHH-HhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISE-LLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   79 (142)
                      ++..|+|||.+.....++.++|+||+|+++++|++|+.+|... .......+...++.+....+........ ....++.
T Consensus       160 ~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd07830         160 STRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQ  239 (283)
T ss_pred             CcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccc
Confidence            4677999998666667889999999999999999999999766 4445555566666555443332211111 1112222


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      .............+.++.+++.+||..+|++||++++++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         240 FAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             cccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            22223334444457889999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.81  E-value=1.1e-19  Score=133.76  Aligned_cols=98  Identities=20%  Similarity=0.286  Sum_probs=74.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|||||++.+. .++.++||||+||++|||++|..||.+...... ..+..   ..  ..+                
T Consensus       542 GT~~Y~APE~l~~~-~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~---~~--~~~----------------  599 (669)
T cd05610         542 GTPDYLAPELLLGK-PHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILN---RD--IPW----------------  599 (669)
T ss_pred             eCccccCHHHcCCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh---cC--CCC----------------
Confidence            68999999997654 789999999999999999999999976643322 22211   00  000                


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                           ......++.++.+++.+||..||.+||++.++++|+||..+
T Consensus       600 -----p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~~~~  640 (669)
T cd05610         600 -----PEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHGV  640 (669)
T ss_pred             -----CcccccCCHHHHHHHHHHcccChhHCcCHHHHHhCHhhcCC
Confidence                 00012357788999999999999999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.81  E-value=5.6e-20  Score=125.44  Aligned_cols=96  Identities=23%  Similarity=0.306  Sum_probs=73.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|+.||...........+.....                       
T Consensus       157 gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~-----------------------  212 (328)
T cd05593         157 GTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI-----------------------  212 (328)
T ss_pred             CCcCccChhhhc-CCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCc-----------------------
Confidence            688999999954 44789999999999999999999999976544332222110000                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                           ......+.++.+||.+||..||++|+     ++.++++|+||...
T Consensus       213 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         213 -----KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             -----cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence                 01123678899999999999999997     89999999999753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.81  E-value=1.4e-19  Score=120.90  Aligned_cols=99  Identities=17%  Similarity=0.205  Sum_probs=73.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh-HHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD-HLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||.+.+ ..++.++|+||+|+++|+|++|+.||...... ............+.                   
T Consensus       159 g~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------  218 (280)
T cd05608         159 GTPGFMAPELLQG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV-------------------  218 (280)
T ss_pred             CCcCccCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC-------------------
Confidence            6788999999654 47889999999999999999999999755221 11111111000000                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                            ......+.++.+|+.+||..||++|+     +++++++||||++.
T Consensus       219 ------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~  263 (280)
T cd05608         219 ------TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL  263 (280)
T ss_pred             ------CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence                  01123678899999999999999999     88999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.81  E-value=1.2e-19  Score=123.65  Aligned_cols=96  Identities=23%  Similarity=0.305  Sum_probs=74.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||...........+.....                       
T Consensus       157 gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-----------------------  212 (323)
T cd05595         157 GTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-----------------------  212 (323)
T ss_pred             CCcCcCCccccc-CCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-----------------------
Confidence            688999999954 44789999999999999999999999976644332222111000                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                           .....++.++.+||.+||..||++|+     ++.++++|+||...
T Consensus       213 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         213 -----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             -----CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence                 01123678899999999999999998     89999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.81  E-value=2.7e-19  Score=122.06  Aligned_cols=131  Identities=34%  Similarity=0.608  Sum_probs=92.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCc--cchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGA--NYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (142)
                      ++..|++||.+.+...++.++|+||+|+++++|++|+.||..... .....+...++.++.......  ....++.....
T Consensus       167 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (328)
T cd07856         167 STRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLP  246 (328)
T ss_pred             ccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhcc
Confidence            466799999865556789999999999999999999999976643 334445555555443322111  11122223333


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHL  132 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~  132 (142)
                      .....+..+.....+.++++++.+||+.+|++||++++++.|+||....++...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~  300 (328)
T cd07856         247 KREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDE  300 (328)
T ss_pred             ccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCccc
Confidence            334444455556688899999999999999999999999999999876665433

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.81  E-value=1.7e-20  Score=122.80  Aligned_cols=104  Identities=16%  Similarity=0.244  Sum_probs=77.2

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      |++|.|||+ ++...|+.++|+||+|+++|-|+.|.+||-+.....+                    .+.+...+.....
T Consensus       226 TPyYvaPev-lg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai--------------------spgMk~rI~~gqy  284 (400)
T KOG0604|consen  226 TPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI--------------------SPGMKRRIRTGQY  284 (400)
T ss_pred             cccccCHHH-hCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC--------------------ChhHHhHhhccCc
Confidence            789999999 6666899999999999999999999999964422110                    0011111111111


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      .-..+-+..++++++++|+++|..+|.+|+|+++++.|||+.+..
T Consensus       285 ~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  285 EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE  329 (400)
T ss_pred             cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence            222233466899999999999999999999999999999998654

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.81  E-value=9.7e-20  Score=123.96  Aligned_cols=96  Identities=20%  Similarity=0.255  Sum_probs=74.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|+.||...........+......                      
T Consensus       163 gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~----------------------  219 (323)
T cd05616         163 GTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA----------------------  219 (323)
T ss_pred             CChhhcCHHHhc-CCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC----------------------
Confidence            688999999955 457899999999999999999999999876544433222211100                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH-----HHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA-----NDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~-----~~~l~~~~~~~~  126 (142)
                            .....+.++.+++.+||..||++|+++     .++++|+||..+
T Consensus       220 ------~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~  263 (323)
T cd05616         220 ------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  263 (323)
T ss_pred             ------CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence                  012367889999999999999999974     789999999854

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=2e-19  Score=128.77  Aligned_cols=129  Identities=18%  Similarity=0.116  Sum_probs=80.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCC-CcCCCC---hhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKP-LFPCGK---KDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||..|+|||++.+ ..++.++||||+||++|+|++|.. |+....   ...+..++..++...............+....
T Consensus       330 gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~  408 (501)
T PHA03210        330 GTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSA  408 (501)
T ss_pred             CCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhh
Confidence            7889999999554 479999999999999999999874 443332   23344444443332222111111122222111


Q ss_pred             CC-CCCchhHhhh--cCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccc
Q 048170           78 PQ-CEPADLAEKT--HGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAH  131 (142)
Q Consensus        78 ~~-~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~  131 (142)
                      .. ..........  ...+.++.++|.+||.+||++||++.|++.||||........
T Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~~~~  465 (501)
T PHA03210        409 EIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEEEEI  465 (501)
T ss_pred             hcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCchHH
Confidence            11 0111111111  236677899999999999999999999999999987544433

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.80  E-value=1.4e-19  Score=123.23  Aligned_cols=96  Identities=23%  Similarity=0.308  Sum_probs=73.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++.+ ..++.++|+||+||++|+|++|+.||.+.........+.....                       
T Consensus       163 gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~-----------------------  218 (324)
T cd05587         163 GTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV-----------------------  218 (324)
T ss_pred             CCccccChhhhcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence            6889999999654 4788999999999999999999999976644333222211000                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH-----HHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA-----NDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~-----~~~l~~~~~~~~  126 (142)
                           ......+.++.+++.+||..||.+|+++     +++++||||..+
T Consensus       219 -----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         219 -----SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI  263 (324)
T ss_pred             -----CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence                 0012367789999999999999999976     799999999864

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.80  E-value=2.1e-19  Score=123.65  Aligned_cols=102  Identities=17%  Similarity=0.164  Sum_probs=72.1

Q ss_pred             ccCcccchhhhcC----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRIC----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||..|+|||++..    ....+.++||||+||++|+|++|+.||.......+.............               
T Consensus       230 gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------  294 (353)
T PLN00034        230 GTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPP---------------  294 (353)
T ss_pred             cCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCC---------------
Confidence            6889999998532    223456899999999999999999999744222222211111000000               


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                               ......+.++++||.+||..||++||++.++++||||..-.
T Consensus       295 ---------~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~  335 (353)
T PLN00034        295 ---------EAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ  335 (353)
T ss_pred             ---------CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence                     01123678899999999999999999999999999999753

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.80  E-value=5.6e-19  Score=118.93  Aligned_cols=121  Identities=31%  Similarity=0.532  Sum_probs=83.5

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC-CC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLP-QC   80 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   80 (142)
                      +..|++||.+.+...++.++|+||+|+++++|++|++||... .......+....+.+....++.......+..... ..
T Consensus       180 ~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (302)
T cd07864         180 TLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQ  259 (302)
T ss_pred             ccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccc
Confidence            456999998665556788999999999999999999999766 3344455555555555444433222111111000 01


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ...........++..+.+++.+||..+|.+||++++++.||||
T Consensus       260 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         260 YRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             cccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            1122233344578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.80  E-value=1.3e-19  Score=123.45  Aligned_cols=96  Identities=21%  Similarity=0.283  Sum_probs=73.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++||||+|+++|+|++|+.||...........+.....                       
T Consensus       162 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~-----------------------  217 (323)
T cd05584         162 GTIEYMAPEILM-RSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL-----------------------  217 (323)
T ss_pred             CCccccChhhcc-CCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence            688999999954 44788999999999999999999999976643322111110000                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                           ......+.++.+||.+||..+|++|+     +++++++||||...
T Consensus       218 -----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         218 -----NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             -----CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence                 01123677899999999999999999     89999999999754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.80  E-value=3.7e-19  Score=118.15  Aligned_cols=96  Identities=19%  Similarity=0.237  Sum_probs=69.3

Q ss_pred             ccCcccchhhhcC----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRIC----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||..|+|||++.+    ...++.++|+||+||++|+|++|+.||.............  ......               
T Consensus       173 g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~--~~~~~~---------------  235 (272)
T cd06637         173 GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP--RNPAPR---------------  235 (272)
T ss_pred             ccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHh--cCCCCC---------------
Confidence            5678999999653    2357789999999999999999999996443222111111  000000               


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                               ......+.++.+|+.+||..+|.+||++.++++||||
T Consensus       236 ---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         236 ---------LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             ---------CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence                     0012356788999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.80  E-value=1.8e-19  Score=122.33  Aligned_cols=96  Identities=21%  Similarity=0.232  Sum_probs=72.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++.+ ..++.++|+||+||++|+|++|..||.+.........+..  ..+ .                   
T Consensus       158 gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--~~~-~-------------------  214 (316)
T cd05592         158 GTPDYIAPEILKG-QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN--DRP-H-------------------  214 (316)
T ss_pred             CCccccCHHHHcC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCC-C-------------------
Confidence            6889999999654 4788999999999999999999999976654333222211  000 0                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH-HHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA-NDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~-~~~l~~~~~~~~  126 (142)
                            .....+.++.+|+.+||..||++|+++ .++++|+||..+
T Consensus       215 ------~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05592         215 ------FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI  254 (316)
T ss_pred             ------CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence                  012367788999999999999999986 478899999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.80  E-value=2.4e-20  Score=127.07  Aligned_cols=96  Identities=24%  Similarity=0.313  Sum_probs=74.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||...........+.....                       
T Consensus       158 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~-----------------------  213 (325)
T cd05594         158 GTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-----------------------  213 (325)
T ss_pred             CCcccCCHHHHc-cCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC-----------------------
Confidence            688999999954 44789999999999999999999999976654433332221100                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                           ......+.++.+|+.+||..||++|+     ++.++++|+||...
T Consensus       214 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         214 -----RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             -----CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence                 00123678899999999999999997     89999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.80  E-value=4e-19  Score=121.90  Aligned_cols=128  Identities=34%  Similarity=0.535  Sum_probs=87.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCC--ccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPG--ANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   78 (142)
                      +|..|++||.+.+...++.++|+||+|++++++++|..||..... .....+.......+......  ......+....+
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (343)
T cd07880         177 VTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLP  256 (343)
T ss_pred             cCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhcc
Confidence            467899999976545688999999999999999999999976633 23333333222221111000  011222333333


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ..............+.++.++|.+||..||++|||+.++++||||+.....
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~  307 (343)
T cd07880         257 RFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP  307 (343)
T ss_pred             ccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence            333344445556788899999999999999999999999999999976544

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.80  E-value=2.9e-19  Score=119.30  Aligned_cols=96  Identities=19%  Similarity=0.218  Sum_probs=68.9

Q ss_pred             ccCcccchhhhcC----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRIC----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      |+..|+|||.+..    ...++.++|+||+|+++|+|++|..||........  +..........               
T Consensus       183 ~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~---------------  245 (282)
T cd06636         183 GTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA--LFLIPRNPPPK---------------  245 (282)
T ss_pred             ccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh--hhhHhhCCCCC---------------
Confidence            5678999998643    23577889999999999999999999964422111  11100000000               


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                               .....++.++.+||.+||..||.+||++.++++||||
T Consensus       246 ---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         246 ---------LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             ---------CcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence                     0012367789999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.80  E-value=5.7e-20  Score=119.32  Aligned_cols=104  Identities=24%  Similarity=0.304  Sum_probs=75.9

Q ss_pred             ccCcccchhhhcC-----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRIC-----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~-----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      ||+.|+|||.+.+     ..+|+..+|+|+.|+++|.|+.|-+||-....-..-.++...                    
T Consensus       184 GTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeG--------------------  243 (411)
T KOG0599|consen  184 GTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEG--------------------  243 (411)
T ss_pred             CCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhc--------------------
Confidence            8999999998654     236888999999999999999999999433111111111110                    


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                          ...-..+-+.+.+...++||+++|+.||.+|.|++++|+||||.++...
T Consensus       244 ----kyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~  292 (411)
T KOG0599|consen  244 ----KYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQ  292 (411)
T ss_pred             ----ccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHh
Confidence                0000111234588899999999999999999999999999999766433

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.80  E-value=5.1e-19  Score=118.16  Aligned_cols=119  Identities=35%  Similarity=0.623  Sum_probs=81.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|++||.+.+ ..++.++|+||+||++++|++|.++|... .......+......+....++....  .....+...
T Consensus       168 ~~~~~~~PE~~~~-~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  244 (287)
T cd07838         168 VTLWYRAPEVLLQ-SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS--LPRSSFPSY  244 (287)
T ss_pred             ccccccChHHhcc-CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc--cchhhcccc
Confidence            4567999999654 47888999999999999999999999766 3344455554443322222211110  001112222


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ............+..+.+++.+||+.||.+||+++++++||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         245 TPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             cccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence            2233344445677888999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.80  E-value=1.8e-19  Score=117.64  Aligned_cols=96  Identities=23%  Similarity=0.215  Sum_probs=77.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+-|+|||+ ...+.|+.++|.|++|+++|||+.|.+||.+...-.+...+-....                       
T Consensus       203 GTPeYLAPEi-i~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v-----------------------  258 (355)
T KOG0616|consen  203 GTPEYLAPEI-IQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV-----------------------  258 (355)
T ss_pred             CCccccChHH-hhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc-----------------------
Confidence            8999999999 5566999999999999999999999999987766554443322111                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                           ...+.++.++++|++++|+.|-.+|.     ...+|.+||||+.+
T Consensus       259 -----~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v  303 (355)
T KOG0616|consen  259 -----KFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV  303 (355)
T ss_pred             -----cCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccc
Confidence                 11133788999999999999999994     46789999999965

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.79  E-value=6e-19  Score=118.79  Aligned_cols=101  Identities=22%  Similarity=0.291  Sum_probs=74.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+. ...++.++|+||+||++|+|++|+.||...+.......+.....+...                   
T Consensus       177 ~~~~y~aPE~~~-~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~-------------------  236 (296)
T cd06655         177 GTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQ-------------------  236 (296)
T ss_pred             CCccccCcchhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccC-------------------
Confidence            567899999854 447888999999999999999999999766432221111111110000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                            ....++..+.+|+.+||..||.+||++.+++.|+||....+
T Consensus       237 ------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~  277 (296)
T cd06655         237 ------NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKP  277 (296)
T ss_pred             ------CcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhccc
Confidence                  01236778899999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.79  E-value=3e-19  Score=122.09  Aligned_cols=123  Identities=19%  Similarity=0.273  Sum_probs=76.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCC--CCCCCC-CCccchH-------
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGN--PTKETW-PGANYIS-------   71 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~-------   71 (142)
                      ||..|+|||++. ...++.++|+||+||++|+|++|+.||..........+......  ...... +......       
T Consensus       164 ~~~~y~aPE~~~-~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (333)
T cd06650         164 GTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYG  242 (333)
T ss_pred             CCccccCHHHhc-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhc
Confidence            678899999955 44788999999999999999999999976544333322211000  000000 0000000       


Q ss_pred             ----------HHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           72 ----------ELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        72 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                                .....+.+......  .....+.++++|+.+||+.||++||++++++.|+||+...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  306 (333)
T cd06650         243 PDSRPPMAIFELLDYIVNEPPPKL--PSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE  306 (333)
T ss_pred             ccccccccHHHHHHHHhcCCCccC--CCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence                      00000000000000  0012567889999999999999999999999999998654

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=5.8e-19  Score=117.44  Aligned_cols=101  Identities=19%  Similarity=0.189  Sum_probs=73.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+.+. .++.++|+||+|+++|+|++|+.||...........+.....   ...                 
T Consensus       160 ~~~~y~~PE~~~~~-~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---~~~-----------------  218 (274)
T cd06609         160 GTPFWMAPEVIKQS-GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNP---PSL-----------------  218 (274)
T ss_pred             CCccccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCC---CCC-----------------
Confidence            45679999996544 689999999999999999999999965532222111111000   000                 


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                          .  ....+.++.+++.+||..+|++||+++++++|+||......
T Consensus       219 ----~--~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~  260 (274)
T cd06609         219 ----E--GNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT  260 (274)
T ss_pred             ----c--ccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence                0  01156788999999999999999999999999999976544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=3.7e-20  Score=126.30  Aligned_cols=98  Identities=20%  Similarity=0.292  Sum_probs=74.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++.+...++.++|+||+||++|+|++|+.||...........+.....   .              ++   
T Consensus       158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---~--------------~~---  217 (330)
T cd05586         158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV---R--------------FP---  217 (330)
T ss_pred             CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC---C--------------CC---
Confidence            688999999976665689999999999999999999999976644333222211000   0              00   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC----CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV----TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~----t~~~~l~~~~~~~~  126 (142)
                             ....+.++.+|+.+||..||.+|+    ++.++++||||...
T Consensus       218 -------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         218 -------KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             -------CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence                   012677889999999999999998    78999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.79  E-value=9e-20  Score=125.00  Aligned_cols=100  Identities=24%  Similarity=0.282  Sum_probs=76.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHH-HHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLS-LIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|||||++.+. .|+.++|.||+||++|||+.|..||......... .+.+..-                       
T Consensus       348 GT~GYMAPEvl~ne-~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~-----------------------  403 (591)
T KOG0986|consen  348 GTVGYMAPEVLQNE-VYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTL-----------------------  403 (591)
T ss_pred             CcccccCHHHHcCC-cccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHh-----------------------
Confidence            89999999996655 6999999999999999999999999766332222 1111111                       


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~~  127 (142)
                        ....+....+++++++|.+.+|..||++|+.     ++++.+||||+++.
T Consensus       404 --~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ln  453 (591)
T KOG0986|consen  404 --EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLN  453 (591)
T ss_pred             --cchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCC
Confidence              1112233458999999999999999999985     56899999999753

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.79  E-value=3.5e-19  Score=121.44  Aligned_cols=124  Identities=17%  Similarity=0.195  Sum_probs=75.6

Q ss_pred             cCcccchhhhcCC-CCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCc---cchHHH----
Q 048170            3 EFPYKAPESRICS-SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGA---NYISEL----   73 (142)
Q Consensus         3 t~~y~~PE~~~~~-~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~----   73 (142)
                      +..|++||++.+. ..++.++|+||+||++++|++|+.||..... .......   ...+...+...   ......    
T Consensus       171 ~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  247 (328)
T cd08226         171 VLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKL---KGPPYSPLDITTFPCEESRMKNSQ  247 (328)
T ss_pred             ccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHh---cCCCCCCccccccchhhhhhccch
Confidence            4569999996554 3578999999999999999999999976532 2222221   11111000000   000000    


Q ss_pred             ---hhcCC----------CCCCch-hHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           74 ---LHSLP----------QCEPAD-LAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        74 ---~~~~~----------~~~~~~-~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                         ...+.          ...... ........+..+.+|+.+||..||++|||++++++|+||..+...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~  317 (328)
T cd08226         248 SGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ  317 (328)
T ss_pred             hhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence               00000          000000 001112356788999999999999999999999999999987654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.79  E-value=7.9e-19  Score=117.37  Aligned_cols=122  Identities=28%  Similarity=0.478  Sum_probs=77.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhh-cC-C
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLH-SL-P   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~   78 (142)
                      ++..|+|||++.+...++.++|+||+|+++++|++|..||.+. ....+..+....+...............+.. .+ .
T Consensus       163 ~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (288)
T cd07833         163 ATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPE  242 (288)
T ss_pred             cccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCC
Confidence            4677999999665547889999999999999999999999765 3333333333333222211111110000000 00 1


Q ss_pred             CCCCchhHhhh-cCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           79 QCEPADLAEKT-HGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        79 ~~~~~~~~~~~-~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                      ........... ..++.++++|+.+||..+|++||+++++++|+||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         243 PSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             CCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence            11111112222 2358889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=3.6e-19  Score=119.22  Aligned_cols=99  Identities=23%  Similarity=0.330  Sum_probs=73.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH-HHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++.+ ..++.++|+||+|+++|+|++|..||.+..... ...+.........                   
T Consensus       163 ~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------  222 (285)
T cd05605         163 GTVGYMAPEVVKN-ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQE-------------------  222 (285)
T ss_pred             CCCCccCcHHhcC-CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccc-------------------
Confidence            5788999999654 478899999999999999999999997653321 1122111111000                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                            .....++..+.+|+.+||..||++|+     +++++++|+||...
T Consensus       223 ------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05605         223 ------EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA  267 (285)
T ss_pred             ------ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence                  01123678889999999999999999     89999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.79  E-value=2.4e-19  Score=121.39  Aligned_cols=125  Identities=15%  Similarity=0.141  Sum_probs=75.3

Q ss_pred             ccCcccchhhhcCC-CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC--
Q 048170            2 VEFPYKAPESRICS-SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLP--   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~-~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   78 (142)
                      ++..|+|||++.+. ..++.++|+||+|+++++|++|..||......... .....+..+... . ............  
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~-~-~~~~~~~~~~~~~~  246 (314)
T cd08216         170 KNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQML-LEKVRGTVPCLL-D-KSTYPLYEDSMSQS  246 (314)
T ss_pred             ccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhccCcccc-c-cCchhhhcCCcCcc
Confidence            45679999996543 35888999999999999999999999755322111 111111110000 0 000000000000  


Q ss_pred             -------CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           79 -------QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        79 -------~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                             .............++.++.+|+.+||..||++||+++++++||||..+...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~~  304 (314)
T cd08216         247 RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRR  304 (314)
T ss_pred             cccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhccc
Confidence                   000000011112245678899999999999999999999999999987533

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.79  E-value=5.2e-19  Score=118.18  Aligned_cols=101  Identities=21%  Similarity=0.239  Sum_probs=73.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||.+.....++.++|+||+||++++|++|..||..........+........                     
T Consensus       157 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------------------  215 (279)
T cd05633         157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVN---------------------  215 (279)
T ss_pred             CCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCC---------------------
Confidence            68899999996555578899999999999999999999996442211111111000000                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~~  127 (142)
                          .......+.++.++|.+||..||++|+     +++++++||||+.+.
T Consensus       216 ----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         216 ----VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             ----cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence                001123678899999999999999999     699999999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.79  E-value=8.7e-19  Score=116.40  Aligned_cols=97  Identities=20%  Similarity=0.280  Sum_probs=71.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH--HHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH--LSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      +|..|+|||++. ...++.++|+||+|+++++|++|..||.......  .......... .                   
T Consensus       168 ~~~~y~aPE~~~-~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~-------------------  226 (267)
T PHA03390        168 GTLDYFSPEKIK-GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK-K-------------------  226 (267)
T ss_pred             CCCcccChhhhc-CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc-c-------------------
Confidence            678899999954 4478899999999999999999999997442221  1111111100 0                   


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCC-HHHHhcCCCccc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-ANDALCIGTSEK  125 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-~~~~l~~~~~~~  125 (142)
                            ....+..+..+.+||.+||+.+|.+|++ ++++++||||..
T Consensus       227 ------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        227 ------LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             ------CCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence                  0111247889999999999999999996 599999999963

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.79  E-value=6.4e-21  Score=132.59  Aligned_cols=123  Identities=30%  Similarity=0.465  Sum_probs=84.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccc-hHHHh-----
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANY-ISELL-----   74 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----   74 (142)
                      ++.+|+|||+++|. .|+...|+||+||+||||++|+..|.+. +.+.+.......|..+..+.-.... .+.|.     
T Consensus       597 VSRFYRaPEIiLG~-~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf  675 (752)
T KOG0670|consen  597 VSRFYRAPEIILGL-PYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNF  675 (752)
T ss_pred             HHHhccCcceeecC-cccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccce
Confidence            35679999997766 9999999999999999999999999988 5555566666667666554322111 11111     


Q ss_pred             -----h---------cCCCCCC-chhHhhhcC----------CCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           75 -----H---------SLPQCEP-ADLAEKTHG----------LEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        75 -----~---------~~~~~~~-~~~~~~~~~----------~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                           +         .+.+-.+ .++...+..          .-..+++||.+||..||++|.|+.|+|+||||..
T Consensus       676 ~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  676 LYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             EEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence                 0         0011111 111111111          2246789999999999999999999999999974

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.79  E-value=8.5e-19  Score=117.37  Aligned_cols=104  Identities=21%  Similarity=0.234  Sum_probs=73.8

Q ss_pred             ccCcccchhhhcCC--CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICS--SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~--~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||..|+|||.+.+.  ..++.++|+||+|+++++|++|+.||..... ....+........+..                
T Consensus       169 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~----------------  231 (288)
T cd06616         169 GCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-VFDQLTQVVKGDPPIL----------------  231 (288)
T ss_pred             CccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-HHHHHhhhcCCCCCcC----------------
Confidence            57789999996544  3688999999999999999999999964431 1111111111000000                


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                           .......++.++.+|+.+||..+|++||+++++++||||+...
T Consensus       232 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~  274 (288)
T cd06616         232 -----SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE  274 (288)
T ss_pred             -----CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence                 0000123677899999999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.78  E-value=1.1e-18  Score=115.01  Aligned_cols=94  Identities=26%  Similarity=0.314  Sum_probs=70.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|+|||++. ...++.++|+||+|+++++|++|+.||...........+.. +..+.                    
T Consensus       164 ~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~--------------------  221 (257)
T cd08223         164 GTPYYMSPELFS-NKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE-GKLPP--------------------  221 (257)
T ss_pred             CCcCccChhHhc-CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh-cCCCC--------------------
Confidence            567899999954 44788899999999999999999999975543222111110 00000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                            .....+.++.+++.+|+..+|++||++.++++||||
T Consensus       222 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         222 ------MPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             ------CccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                  012367789999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.78  E-value=3.4e-19  Score=119.34  Aligned_cols=99  Identities=27%  Similarity=0.430  Sum_probs=72.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||.+.+ ..++.++|+||+|+++|+|++|..||........ ...........                    
T Consensus       163 g~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~--------------------  221 (285)
T cd05630         163 GTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ--------------------  221 (285)
T ss_pred             CCccccChHHHcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh--------------------
Confidence            6788999999654 4788999999999999999999999975422111 11110000000                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~  126 (142)
                           .......+.++++|+.+||+.||++|++     ++++++||||.++
T Consensus       222 -----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~  267 (285)
T cd05630         222 -----EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI  267 (285)
T ss_pred             -----hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence                 0111336778899999999999999999     8999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=3.1e-19  Score=124.53  Aligned_cols=99  Identities=21%  Similarity=0.309  Sum_probs=77.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |++.|-|||++++....-+++||||+|++||-|.+|++||+..+....-.++-.    +...                  
T Consensus       180 GSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImD----CKYt------------------  237 (864)
T KOG4717|consen  180 GSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMD----CKYT------------------  237 (864)
T ss_pred             chhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhc----cccc------------------
Confidence            678899999999886677899999999999999999999986633222122111    1111                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                            ....++.++++||..||..||.+|.+.++|..++|++.+..
T Consensus       238 ------vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  238 ------VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             ------CchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence                  11347899999999999999999999999999999996543

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.78  E-value=4.7e-19  Score=120.93  Aligned_cols=99  Identities=20%  Similarity=0.251  Sum_probs=70.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh------HHHHHHHHhCCCCCCCCCCccchHHHhh
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD------HLSLIVRLFGNPTKETWPGANYISELLH   75 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (142)
                      ||..|+|||++. ...++.++|+||+||++|+|++|+.||......      ....+......                 
T Consensus       158 gt~~y~aPE~~~-~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-----------------  219 (329)
T cd05588         158 GTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE-----------------  219 (329)
T ss_pred             CCccccCHHHHc-CCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc-----------------
Confidence            688899999965 447889999999999999999999999632110      00000000000                 


Q ss_pred             cCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCC------HHHHhcCCCccch
Q 048170           76 SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT------ANDALCIGTSEKL  126 (142)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t------~~~~l~~~~~~~~  126 (142)
                      .    .    ......++.++.++|.+||..||.+|++      ++++++||||..+
T Consensus       220 ~----~----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~  268 (329)
T cd05588         220 K----Q----IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI  268 (329)
T ss_pred             C----C----CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            0    0    0011336778999999999999999987      7899999999853

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=2.3e-19  Score=123.19  Aligned_cols=99  Identities=22%  Similarity=0.366  Sum_probs=73.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+. .++.++||||+||++|+|++|+.||...........+......  ...             +   
T Consensus       192 gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~--~~~-------------p---  252 (350)
T cd05573         192 GTPDYIAPEVLRGT-PYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKES--LRF-------------P---  252 (350)
T ss_pred             cCccccCHHHHcCC-CCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCc--ccC-------------C---
Confidence            68899999996544 8899999999999999999999999766433322221110000  000             0   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC-HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-~~~~l~~~~~~~~  126 (142)
                            .....+.++.+||.+||. ||.+|++ ++++++||||..+
T Consensus       253 ------~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         253 ------PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             ------CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence                  001267889999999998 9999999 9999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.78  E-value=1e-18  Score=120.67  Aligned_cols=99  Identities=20%  Similarity=0.261  Sum_probs=70.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.+.........+.......  .             ++.  
T Consensus       198 Gt~~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~--~-------------~p~--  259 (363)
T cd05628         198 GTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETL--I-------------FPP--  259 (363)
T ss_pred             CCccccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcc--c-------------CCC--
Confidence            7889999999654 478999999999999999999999997664433322221110000  0             000  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCC---CCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDH---RVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~---R~t~~~~l~~~~~~~~  126 (142)
                             ....+.++++|+.+++. +|.+   ||+++++++||||..+
T Consensus       260 -------~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         260 -------EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             -------cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence                   01267789999999876 4444   5799999999999865

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.78  E-value=1e-18  Score=118.99  Aligned_cols=96  Identities=22%  Similarity=0.296  Sum_probs=73.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||.+.........+.....                       
T Consensus       163 gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~-----------------------  218 (323)
T cd05615         163 GTPDYIAPEIIA-YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV-----------------------  218 (323)
T ss_pred             CCccccCHHHHc-CCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----------------------
Confidence            688999999955 44789999999999999999999999976654433222211110                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~  126 (142)
                           ......+.++.+++.+||..+|.+|++     .+++++|+||..+
T Consensus       219 -----~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         219 -----SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             -----CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence                 001236778899999999999999997     4789999999975

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.78  E-value=4.5e-19  Score=123.21  Aligned_cols=99  Identities=23%  Similarity=0.319  Sum_probs=70.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|..||........ ..+..........                  
T Consensus       210 gt~~Y~aPE~~~-~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~------------------  270 (381)
T cd05626         210 GTPNYIAPEVLL-RKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIP------------------  270 (381)
T ss_pred             CCccccCHHHHc-CCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCC------------------
Confidence            788999999965 44789999999999999999999999976643222 2221100000000                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhccc--CCCCCCCHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCL--DPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~--~p~~R~t~~~~l~~~~~~~~  126 (142)
                             .....+.++++||.+|+..  ++..|++++++++||||..+
T Consensus       271 -------~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         271 -------PQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             -------CCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence                   0123678999999996654  44459999999999999865

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=1.5e-18  Score=114.71  Aligned_cols=95  Identities=22%  Similarity=0.306  Sum_probs=69.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|+|||.+.+ ..++.++|+||+|+++|+|++|+.||...+....  ...........                   
T Consensus       169 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~~~~-------------------  226 (263)
T cd06625         169 GTPYWMSPEVISG-EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA--IFKIATQPTNP-------------------  226 (263)
T ss_pred             cCccccCcceecc-CCCCchhhhHHHHHHHHHHHhCCCCccccchHHH--HHHHhccCCCC-------------------
Confidence            4568999999554 4688999999999999999999999965422211  11111100000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                           ......+.++.+++.+||..+|.+||++.++++|+||
T Consensus       227 -----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         227 -----QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             -----CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence                 0112367788999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.78  E-value=1.6e-18  Score=114.74  Aligned_cols=95  Identities=22%  Similarity=0.287  Sum_probs=70.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh-HHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD-HLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||.+. ...++.++|+||+|+++++|++|..||...+.. ....+....+..                     
T Consensus       170 ~~~~~~~pe~~~-~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------  227 (265)
T cd06631         170 GTPYWMAPEVIN-ESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLM---------------------  227 (265)
T ss_pred             CCccccChhhhc-CCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCC---------------------
Confidence            567899999954 447889999999999999999999999654321 111111100000                     


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                           .......+.++.+++.+||..+|++||++.++++||||
T Consensus       228 -----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         228 -----PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             -----CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence                 00113367889999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.78  E-value=3.4e-19  Score=113.17  Aligned_cols=128  Identities=20%  Similarity=0.327  Sum_probs=96.1

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcC-CC-ChhHHHHHHHHhCCCCCCCCC---CccchHHHhhcC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CG-KKDHLSLIVRLFGNPTKETWP---GANYISELLHSL   77 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   77 (142)
                      +++|..||.+..-..|+.+.|+||+||++..|++.+.||. +. +.+++..|.+.+|...-..+-   ...-.+++.+.+
T Consensus       195 SRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~  274 (338)
T KOG0668|consen  195 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDIL  274 (338)
T ss_pred             hhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHh
Confidence            5678999998887889999999999999999999987774 33 668888888888853211100   011223444445


Q ss_pred             CCCCCchhHhhhcC-----CCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           78 PQCEPADLAEKTHG-----LEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        78 ~~~~~~~~~~~~~~-----~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                      .+....++..+...     .++++.||+.++|..|..+|+||.|++.||||..+....
T Consensus       275 ~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~~  332 (338)
T KOG0668|consen  275 GRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREAE  332 (338)
T ss_pred             hccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHHh
Confidence            55555666554422     668999999999999999999999999999999776543

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.78  E-value=1.1e-18  Score=115.45  Aligned_cols=100  Identities=19%  Similarity=0.157  Sum_probs=71.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+..|++||.+.....++.++|+||+|+++++|++|+.||........  ........+... ..               
T Consensus       168 ~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~-~~---------------  229 (267)
T cd06610         168 GTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV--LMLTLQNDPPSL-ET---------------  229 (267)
T ss_pred             CChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh--HHHHhcCCCCCc-CC---------------
Confidence            567799999966555788999999999999999999999965532211  111111110000 00               


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                          ......++.+..+++.+||..||++||+++++++||||
T Consensus       230 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         230 ----GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             ----ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence                00023467888999999999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.78  E-value=9.1e-19  Score=116.86  Aligned_cols=100  Identities=21%  Similarity=0.250  Sum_probs=71.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh-HHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD-HLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++.+. .++.++|+||+||++|+|++|..||...... ....+..........                  
T Consensus       156 ~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------  216 (277)
T cd05607         156 GTNGYMAPEILKEE-PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK------------------  216 (277)
T ss_pred             CCCCccCHHHHccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc------------------
Confidence            67899999996544 6999999999999999999999999654221 111111110000000                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCH----HHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA----NDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~----~~~l~~~~~~~~  126 (142)
                            ......+.+.++|+.+||+.||++|+++    +++++|+||..+
T Consensus       217 ------~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~  260 (277)
T cd05607         217 ------FEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI  260 (277)
T ss_pred             ------cccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence                  0012367889999999999999999999    678899999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=5.6e-19  Score=120.68  Aligned_cols=104  Identities=16%  Similarity=0.233  Sum_probs=75.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++.+. .++.++|+||+||++|+|++|..||...........+.......  ..+.               
T Consensus       160 gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~---------------  221 (333)
T cd05600         160 GSPDYMAPEVLRGK-GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETL--QRPV---------------  221 (333)
T ss_pred             cCccccChhHhcCC-CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccc--cCCC---------------
Confidence            68899999996544 88999999999999999999999997664433322221111000  0000               


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                         ........+.++.+|+.+||..+|.+|++++++++||||...
T Consensus       222 ---~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         222 ---YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             ---CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence               000002368889999999999999999999999999999965

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.78  E-value=2.8e-19  Score=121.70  Aligned_cols=96  Identities=21%  Similarity=0.212  Sum_probs=73.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||...........+.  .. ..                    
T Consensus       158 gt~~y~aPE~~~-~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~-~~--------------------  213 (323)
T cd05575         158 GTPEYLAPEVLR-KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL--NK-PL--------------------  213 (323)
T ss_pred             CChhhcChhhhc-CCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHH--cC-CC--------------------
Confidence            688999999955 4478899999999999999999999997664433322211  00 00                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH----HHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA----NDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~----~~~l~~~~~~~~  126 (142)
                           ......+.++.++|.+||..||.+|+++    .++++||||..+
T Consensus       214 -----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~  257 (323)
T cd05575         214 -----RLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI  257 (323)
T ss_pred             -----CCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence                 0112367889999999999999999987    699999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.78  E-value=1.2e-18  Score=117.18  Aligned_cols=103  Identities=21%  Similarity=0.215  Sum_probs=75.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||.+. ...++.++|+||+|+++++|++|..||...........+....  ....                  
T Consensus       180 ~~~~y~aPE~~~-~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~--~~~~------------------  238 (292)
T cd06658         180 GTPYWMAPEVIS-RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNL--PPRV------------------  238 (292)
T ss_pred             cCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC--CCcc------------------
Confidence            567899999954 4478899999999999999999999997553322211111100  0000                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                           ......+..+.+++.+||..||++|||++++++|+||.....+.
T Consensus       239 -----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~  282 (292)
T cd06658         239 -----KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS  282 (292)
T ss_pred             -----ccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence                 00112567889999999999999999999999999999765554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.78  E-value=1.7e-18  Score=115.96  Aligned_cols=102  Identities=25%  Similarity=0.251  Sum_probs=74.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+..|++||.+.+ ..++.++|+||+|+++++|++|+.||...........+.....  ...                  
T Consensus       177 ~~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~--~~~------------------  235 (285)
T cd06648         177 GTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLP--PKL------------------  235 (285)
T ss_pred             CCccccCHHHhcC-CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCC--CCC------------------
Confidence            5678999999544 4688999999999999999999999965533222222211100  000                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                           ......+..+.+|+.+||..+|++||++.++++|+||......
T Consensus       236 -----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~  278 (285)
T cd06648         236 -----KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPP  278 (285)
T ss_pred             -----cccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCc
Confidence                 0011256789999999999999999999999999999887643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=6.3e-19  Score=117.38  Aligned_cols=106  Identities=18%  Similarity=0.210  Sum_probs=75.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+..|+|||.+.+...++.++|+||+|+++|+|++|..||...........+.  ...++. .             .   
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~--~~~~~~-~-------------~---  223 (277)
T cd06917         163 GTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP--KSKPPR-L-------------E---  223 (277)
T ss_pred             CCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc--cCCCCC-C-------------C---
Confidence            56679999986655567889999999999999999999996543221111000  000000 0             0   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccccc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLY  133 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~~  133 (142)
                             ....+.++.+++.+||..||++||++.+++.|+||++.......+
T Consensus       224 -------~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~~~~~~~  268 (277)
T cd06917         224 -------DNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSKTPVSI  268 (277)
T ss_pred             -------cccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccccCchhh
Confidence                   012567889999999999999999999999999998765443333

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=5e-19  Score=122.18  Aligned_cols=99  Identities=21%  Similarity=0.366  Sum_probs=72.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||...........+.....  ....             +.  
T Consensus       201 gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~--~~~~-------------~~--  262 (364)
T cd05599         201 GTPDYIAPEVFL-QTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKE--TLQF-------------PD--  262 (364)
T ss_pred             cCccccCHHHHc-CCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCC--ccCC-------------CC--
Confidence            789999999954 44789999999999999999999999976644332221111000  0000             00  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC---HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT---ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t---~~~~l~~~~~~~~  126 (142)
                             ...++.++++||.+||. +|.+|++   ++++++||||...
T Consensus       263 -------~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         263 -------EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             -------CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence                   01367889999999997 8999998   9999999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.78  E-value=1.5e-18  Score=116.45  Aligned_cols=102  Identities=18%  Similarity=0.209  Sum_probs=72.5

Q ss_pred             ccCcccchhhhcC----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRIC----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ++..|++||.+.+    ...++.++|+||+|+++|+|++|..||..........  .......+..              
T Consensus       172 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~--~~~~~~~~~~--------------  235 (292)
T cd06644         172 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL--KIAKSEPPTL--------------  235 (292)
T ss_pred             CCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHH--HHhcCCCccC--------------
Confidence            4678999998642    3356788999999999999999999986553322111  1111100000              


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                               ......+.++.+|+.+||..+|++||+++++++||||..+..
T Consensus       236 ---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  277 (292)
T cd06644         236 ---------SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS  277 (292)
T ss_pred             ---------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence                     001235678899999999999999999999999999987643

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.78  E-value=1.2e-18  Score=114.68  Aligned_cols=96  Identities=21%  Similarity=0.241  Sum_probs=69.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+. ...++.++|+||+|+++++|++|+.||...........+..  . ....                  
T Consensus       161 ~~~~y~~PE~~~-~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~--~-~~~~------------------  218 (256)
T cd06612         161 GTPFWMAPEVIQ-EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN--K-PPPT------------------  218 (256)
T ss_pred             CCccccCHHHHh-cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc--C-CCCC------------------
Confidence            567899999954 44788999999999999999999999965433221111100  0 0000                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                          .......+.++.+++.+|+..+|++||++.+++.||||
T Consensus       219 ----~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         219 ----LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             ----CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence                00012256788999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=1.4e-18  Score=115.92  Aligned_cols=101  Identities=21%  Similarity=0.261  Sum_probs=72.8

Q ss_pred             ccCcccchhhhcC----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRIC----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      +|..|++||.+..    ...++.++|+||+|+++|+|++|+.||..........  .......+..              
T Consensus       165 ~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~--------------  228 (280)
T cd06611         165 GTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLL--KILKSEPPTL--------------  228 (280)
T ss_pred             cchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHH--HHhcCCCCCc--------------
Confidence            5778999998642    3356778999999999999999999997553322211  1111100000              


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                               .....++.++.+++.+||..+|.+||+++++++|+||....
T Consensus       229 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~  269 (280)
T cd06611         229 ---------DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQS  269 (280)
T ss_pred             ---------CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccc
Confidence                     00123667889999999999999999999999999999764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.78  E-value=1.6e-18  Score=114.80  Aligned_cols=94  Identities=24%  Similarity=0.423  Sum_probs=69.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+..|++||.+. ...++.++|+||+|+++++|++|+.||.......  .+........+                    
T Consensus       174 ~~~~y~~pe~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~--------------------  230 (267)
T cd06628         174 GSVFWMAPEVVK-QTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ--AIFKIGENASP--------------------  230 (267)
T ss_pred             CCcCccChhHhc-cCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH--HHHHHhccCCC--------------------
Confidence            567899999954 4478889999999999999999999997552211  11111110000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                           ......+.++.++|.+||..||.+||++.++++|+||
T Consensus       231 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         231 -----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             -----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence                 0112367889999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.77  E-value=1.6e-18  Score=115.84  Aligned_cols=99  Identities=19%  Similarity=0.155  Sum_probs=71.7

Q ss_pred             ccCcccchhhhc----CCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRI----CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~----~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      +|..|++||++.    ....++.++|+||+||++++|++|+.||........ ..+..  ...+..              
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~--~~~~~~--------------  228 (282)
T cd06643         165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAK--SEPPTL--------------  228 (282)
T ss_pred             ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhh--cCCCCC--------------
Confidence            577899999864    233577899999999999999999999975533221 11111  000000              


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                                .....++.++.+|+.+||..+|.+||+++++++||||...
T Consensus       229 ----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         229 ----------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             ----------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence                      0012357789999999999999999999999999999854

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.77  E-value=6.3e-19  Score=121.34  Aligned_cols=98  Identities=18%  Similarity=0.149  Sum_probs=76.2

Q ss_pred             ccCcccchhhhcCCC---CCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSS---VYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~---~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||+.++|||.+.++.   ..+.+.||||+|++||.|++|+.||.+... ....+|+..--..+..               
T Consensus       277 GTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~---------------  341 (576)
T KOG0585|consen  277 GTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPEN---------------  341 (576)
T ss_pred             CCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCc---------------
Confidence            899999999987643   355789999999999999999999987733 3444444321111111               


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                                  ++..+++++||.+||++||++|.+..++..|||...-
T Consensus       342 ------------pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  342 ------------PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             ------------ccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence                        2367889999999999999999999999999998854

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.77  E-value=7.7e-19  Score=125.61  Aligned_cols=98  Identities=18%  Similarity=0.272  Sum_probs=74.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|+.||...........+.. +...                     
T Consensus       207 Gt~~Y~aPE~~~-~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~-~~~~---------------------  263 (496)
T PTZ00283        207 GTPYYVAPEIWR-RKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA-GRYD---------------------  263 (496)
T ss_pred             CCcceeCHHHhC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc-CCCC---------------------
Confidence            688899999954 45789999999999999999999999976644332221110 0000                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                           ......+.++.+++.+||..||.+||++.++++|||+....
T Consensus       264 -----~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~  304 (496)
T PTZ00283        264 -----PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFI  304 (496)
T ss_pred             -----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhh
Confidence                 01133678899999999999999999999999999987543

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.77  E-value=6.5e-19  Score=120.24  Aligned_cols=99  Identities=20%  Similarity=0.251  Sum_probs=70.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh------hHHHHHHHHhCCCCCCCCCCccchHHHhh
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK------DHLSLIVRLFGNPTKETWPGANYISELLH   75 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (142)
                      ||..|+|||++. ...++.++|+||+||++|+|++|+.||.....      .....+........               
T Consensus       158 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~---------------  221 (329)
T cd05618         158 GTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ---------------  221 (329)
T ss_pred             CCccccCHHHHc-CCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC---------------
Confidence            688999999955 44788999999999999999999999952210      00000111000000               


Q ss_pred             cCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCC------HHHHhcCCCccch
Q 048170           76 SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT------ANDALCIGTSEKL  126 (142)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t------~~~~l~~~~~~~~  126 (142)
                                .......+.++.+||.+||..||++|++      +.++++||||..+
T Consensus       222 ----------~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         222 ----------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             ----------CCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence                      0112346778899999999999999998      5799999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.77  E-value=1.1e-18  Score=131.06  Aligned_cols=99  Identities=23%  Similarity=0.291  Sum_probs=74.5

Q ss_pred             ccCcccchhhhcCC-CCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICS-SVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~-~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|+|||++.+. ..++.++|||||||++|+|++|..||... ....+...+.   ..+...                
T Consensus       203 GTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk---~~p~lp----------------  263 (1021)
T PTZ00266        203 GTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELK---RGPDLP----------------  263 (1021)
T ss_pred             CCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHh---cCCCCC----------------
Confidence            68899999997643 46889999999999999999999999754 2222222211   111000                


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                               ....+.++.+||..||..+|.+||++.+++.|+|+..+..
T Consensus       264 ---------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~  303 (1021)
T PTZ00266        264 ---------IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGP  303 (1021)
T ss_pred             ---------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCC
Confidence                     1225678999999999999999999999999999986643

>PHA02988 hypothetical protein; Provisional

Probab=99.77  E-value=2.3e-18  Score=115.34  Aligned_cols=92  Identities=15%  Similarity=0.091  Sum_probs=67.9

Q ss_pred             ccCcccchhhhcCC-CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICS-SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~-~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++.+. ..++.++||||+||++|+|++|+.||.......+...+...+....                   
T Consensus       182 ~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~-------------------  242 (283)
T PHA02988        182 NFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK-------------------  242 (283)
T ss_pred             CcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC-------------------
Confidence            56789999996542 5789999999999999999999999986644333222211111000                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             .....+.++.+|+.+||..||++|||++++++
T Consensus       243 -------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        243 -------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             -------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence                   00136778999999999999999999999873

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.77  E-value=2.1e-18  Score=116.08  Aligned_cols=100  Identities=20%  Similarity=0.269  Sum_probs=72.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|+|||.+. ...++.++|+||+||++|+|++|+.||.................+..                    
T Consensus       178 ~~~~y~aPE~~~-~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------------  236 (296)
T cd06654         178 GTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--------------------  236 (296)
T ss_pred             CCccccCHHHHc-CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCC--------------------
Confidence            567899999954 44678999999999999999999999975533211111110010000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                           ......+..+.+|+.+||..+|++||++.++++|+||....
T Consensus       237 -----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~  277 (296)
T cd06654         237 -----QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAK  277 (296)
T ss_pred             -----CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccC
Confidence                 00123667789999999999999999999999999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=2.1e-18  Score=116.92  Aligned_cols=98  Identities=22%  Similarity=0.314  Sum_probs=73.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH-HHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++. ...++.++|+||+|+++|+|++|..||....... ...+.   .....  .+               
T Consensus       194 g~~~y~aPE~~~-~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~---~~~~~--~~---------------  252 (316)
T cd05574         194 GTEEYIAPEVIS-GDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNIL---KKEVT--FP---------------  252 (316)
T ss_pred             CccCCcCHHHHc-CCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHh---cCCcc--CC---------------
Confidence            567799999954 4478899999999999999999999997653322 22111   10000  00               


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCC----HHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT----ANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t----~~~~l~~~~~~~~~  127 (142)
                             .....+.++.+++.+||..||++||+    ++++++||||....
T Consensus       253 -------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~  296 (316)
T cd05574         253 -------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVN  296 (316)
T ss_pred             -------CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCC
Confidence                   00115778999999999999999999    99999999998754

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.77  E-value=7.5e-19  Score=121.71  Aligned_cols=100  Identities=17%  Similarity=0.189  Sum_probs=73.1

Q ss_pred             ccCcccchhhhcCC---CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICS---SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~---~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+.   ..++.++|+||+||++|+|++|..||...........+.  ........+             
T Consensus       205 gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~--~~~~~~~~~-------------  269 (370)
T cd05596         205 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM--DHKNSLTFP-------------  269 (370)
T ss_pred             CCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHH--cCCCcCCCC-------------
Confidence            68899999996543   247889999999999999999999997664432222111  100000000             


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCC--CCCHHHHhcCCCccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDH--RVTANDALCIGTSEK  125 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~--R~t~~~~l~~~~~~~  125 (142)
                               .....+.++++||.+||..+|.+  |++++++++||||+.
T Consensus       270 ---------~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~  309 (370)
T cd05596         270 ---------DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN  309 (370)
T ss_pred             ---------CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence                     01236889999999999999987  999999999999985

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.77  E-value=7e-19  Score=122.24  Aligned_cols=99  Identities=23%  Similarity=0.349  Sum_probs=71.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||...........+......  ...+                
T Consensus       210 gt~~Y~aPE~~~-~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~p----------------  270 (382)
T cd05625         210 GTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTS--LHIP----------------  270 (382)
T ss_pred             cCcccCCHHHhc-CCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCC--cCCC----------------
Confidence            688999999965 447899999999999999999999999766432221111110000  0000                


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC---HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT---ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t---~~~~l~~~~~~~~  126 (142)
                            .....+.++.++|.+|+ .+|.+|++   ++++++||||..+
T Consensus       271 ------~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  311 (382)
T cd05625         271 ------PQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI  311 (382)
T ss_pred             ------CcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence                  01236788999999976 59999997   9999999999865

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.77  E-value=3.9e-18  Score=114.88  Aligned_cols=102  Identities=24%  Similarity=0.305  Sum_probs=74.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+..|+|||.+. ...++.++|+||+|+++++|++|+.||...........+.  . ......                 
T Consensus       179 ~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~--~-~~~~~~-----------------  237 (297)
T cd06659         179 GTPYWMAPEVIS-RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR--D-SPPPKL-----------------  237 (297)
T ss_pred             cCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--c-cCCCCc-----------------
Confidence            567899999954 4478899999999999999999999997553322211111  1 000000                 


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                           ......+..+.+++.+||..+|.+||+++++++|+||......
T Consensus       238 -----~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~  280 (297)
T cd06659         238 -----KNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLP  280 (297)
T ss_pred             -----cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCc
Confidence                 0012356778999999999999999999999999999875443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.77  E-value=2.2e-19  Score=122.54  Aligned_cols=99  Identities=22%  Similarity=0.372  Sum_probs=72.4

Q ss_pred             ccCcccchhhhcC-----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH-HHHHHHHhCCCCCCCCCCccchHHHhh
Q 048170            2 VEFPYKAPESRIC-----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETWPGANYISELLH   75 (142)
Q Consensus         2 ~t~~y~~PE~~~~-----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (142)
                      ||+.|+|||++..     ...++.++||||+||++|+|++|..||....... ...+... ..  ....           
T Consensus       165 gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~-~~--~~~~-----------  230 (330)
T cd05601         165 GTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF-QR--FLKF-----------  230 (330)
T ss_pred             CCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcC-CC--ccCC-----------
Confidence            6888999999653     3467889999999999999999999997653322 2222111 00  0000           


Q ss_pred             cCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           76 SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                        +         .....+.++.+|+.+||. +|.+|++++++++||||..+
T Consensus       231 --~---------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         231 --P---------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             --C---------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence              0         012367889999999998 99999999999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.77  E-value=2.3e-18  Score=114.98  Aligned_cols=101  Identities=22%  Similarity=0.239  Sum_probs=74.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|++||.+.+...++.++|+||+|+++++|++|..||..........+.........                    
T Consensus       157 ~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  216 (278)
T cd05606         157 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV--------------------  216 (278)
T ss_pred             CCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCC--------------------
Confidence            678899999966555688999999999999999999999975522111111111000000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~~  127 (142)
                           ......+.++.+++.+||..+|.+|+     ++.++++||||....
T Consensus       217 -----~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         217 -----ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             -----CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence                 01123678899999999999999999     999999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=1.9e-18  Score=114.68  Aligned_cols=96  Identities=23%  Similarity=0.271  Sum_probs=68.5

Q ss_pred             ccCcccchhhhcC----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRIC----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      ||..|+|||.+..    ...++.++|+||+|+++++|++|..||..... .....+..   ......             
T Consensus       175 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~-------------  238 (275)
T cd06608         175 GTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPR---NPPPTL-------------  238 (275)
T ss_pred             ccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhc---cCCCCC-------------
Confidence            4677999998543    23467789999999999999999999964422 22221111   000000             


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                                ......+.++++|+.+||..||++|||+.++++|||+
T Consensus       239 ----------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         239 ----------KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             ----------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence                      0012256788999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.77  E-value=1.4e-18  Score=117.09  Aligned_cols=105  Identities=22%  Similarity=0.276  Sum_probs=74.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+. ...++.++|+||+|+++|+|++|..||...............+.+..                    
T Consensus       177 ~~~~y~aPE~~~-~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~--------------------  235 (297)
T cd06656         177 GTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPEL--------------------  235 (297)
T ss_pred             CCccccCHHHHc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCC--------------------
Confidence            567899999954 45788999999999999999999999965432111000000000000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcccc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHL  132 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~  132 (142)
                           ......+..+++|+.+||..+|++||+++++++||||.........
T Consensus       236 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~~  281 (297)
T cd06656         236 -----QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSL  281 (297)
T ss_pred             -----CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccccccc
Confidence                 0012366778999999999999999999999999999977654443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.76  E-value=2.3e-18  Score=122.76  Aligned_cols=97  Identities=21%  Similarity=0.228  Sum_probs=73.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|..||.+.........+.. +...+                    
T Consensus       233 gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~-~~~~~--------------------  290 (478)
T PTZ00267        233 GTPYYLAPELWE-RKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLY-GKYDP--------------------  290 (478)
T ss_pred             CCccccCHhHhC-CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-CCCCC--------------------
Confidence            788999999954 45899999999999999999999999976544332221111 10000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                            ....++.++++||.+||..||++||++++++.|+|+...
T Consensus       291 ------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~  329 (478)
T PTZ00267        291 ------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV  329 (478)
T ss_pred             ------CCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence                  012367789999999999999999999999999998754

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.76  E-value=3.3e-18  Score=113.39  Aligned_cols=95  Identities=21%  Similarity=0.337  Sum_probs=67.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|+|||.+. ...++.++|+||+||++++|++|+.||.......  .+...........                  
T Consensus       171 ~~~~y~aPE~~~-~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~------------------  229 (266)
T cd06651         171 GTPYWMSPEVIS-GEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA--AIFKIATQPTNPQ------------------  229 (266)
T ss_pred             ccccccCHHHhC-CCCCCchhhhHHHHHHHHHHHHCCCCccccchHH--HHHHHhcCCCCCC------------------
Confidence            567799999954 4478899999999999999999999997552211  1111111111000                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                            ....++..+.+++ +|+..+|++||+++++++||||+
T Consensus       230 ------~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         230 ------LPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             ------CchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence                  0122566778888 57778999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.76  E-value=3.6e-18  Score=114.58  Aligned_cols=97  Identities=24%  Similarity=0.203  Sum_probs=69.0

Q ss_pred             ccCcccchhhhcCCC----CCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRICSS----VYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~----~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      |+..|++||.+....    .++.++|+||+|+++++|++|+.||..... .....+.   .......             
T Consensus       190 ~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~---~~~~~~~-------------  253 (291)
T cd06639         190 GTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIP---RNPPPTL-------------  253 (291)
T ss_pred             CCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHh---cCCCCCC-------------
Confidence            467799999854332    367899999999999999999999975532 2221111   1000000             


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                                ........++.+|+.+||..+|++||++.++++||||+
T Consensus       254 ----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         254 ----------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             ----------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence                      00012456789999999999999999999999999984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.76  E-value=3.3e-18  Score=115.74  Aligned_cols=122  Identities=17%  Similarity=0.207  Sum_probs=76.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCC-C-----------CCccc
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKET-W-----------PGANY   69 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~   69 (142)
                      |+..|++||.+. ...++.++|+||+|+++++|++|..||...................... .           .....
T Consensus       160 ~~~~~~aPE~~~-~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (308)
T cd06615         160 GTRSYMSPERLQ-GTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMA  238 (308)
T ss_pred             CCcCccChhHhc-CCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhh
Confidence            567899999854 4478899999999999999999999997554333333222111100000 0           00000


Q ss_pred             hHHHhhc-CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           70 ISELLHS-LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        70 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ....... .....+..   ....++.++.+|+.+||..+|++||+++++++||||....
T Consensus       239 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~  294 (308)
T cd06615         239 IFELLDYIVNEPPPKL---PSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAE  294 (308)
T ss_pred             HHHHHHHHhcCCCccC---cCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcc
Confidence            0001111 11100000   0112677899999999999999999999999999998753

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.76  E-value=2.4e-18  Score=115.28  Aligned_cols=100  Identities=20%  Similarity=0.280  Sum_probs=74.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH-HHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||.+.+ ..++.++|+||+|+++++|++|..||....... ...+..........                  
T Consensus       163 g~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~------------------  223 (285)
T cd05632         163 GTVGYMAPEVLNN-QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEV------------------  223 (285)
T ss_pred             CCcCccChHHhcC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccc------------------
Confidence            5788999999654 478899999999999999999999997653322 12221111110000                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~~  127 (142)
                             .....+.++.+|+.+||..||++|++     ++++++|+||++..
T Consensus       224 -------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~  268 (285)
T cd05632         224 -------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMN  268 (285)
T ss_pred             -------cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCC
Confidence                   11336778899999999999999999     88999999999763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.76  E-value=2.5e-18  Score=113.25  Aligned_cols=94  Identities=26%  Similarity=0.332  Sum_probs=70.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+..|+|||.+. ....+.++|+||+|+++++|++|..||...........+. .+..+.                    
T Consensus       163 ~~~~~~~pe~~~-~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~-~~~~~~--------------------  220 (256)
T cd08218         163 GTPYYLSPEICE-NRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKII-RGSYPP--------------------  220 (256)
T ss_pred             CCccccCHHHhC-CCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHh-cCCCCC--------------------
Confidence            567799999954 4468889999999999999999999997553322211111 011000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                            .....+.++.+++.+||+.+|.+||++.++++||||
T Consensus       221 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         221 ------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             ------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence                  012367789999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.76  E-value=2.4e-18  Score=117.36  Aligned_cols=100  Identities=20%  Similarity=0.222  Sum_probs=71.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh----hHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK----DHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||+.|+|||++. ...++.++|+||+|+++|+|++|..||.....    .....+.......+.                
T Consensus       158 gt~~y~aPE~~~-~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----------------  220 (327)
T cd05617         158 GTPNYIAPEILR-GEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI----------------  220 (327)
T ss_pred             CCcccCCHHHHC-CCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC----------------
Confidence            688999999955 44889999999999999999999999953211    001111111000000                


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCC------HHHHhcCCCccchh
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT------ANDALCIGTSEKLL  127 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t------~~~~l~~~~~~~~~  127 (142)
                               ......+..+.+++.+||..||++|++      ++++++|+||..+.
T Consensus       221 ---------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~  267 (327)
T cd05617         221 ---------RIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID  267 (327)
T ss_pred             ---------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence                     011236778899999999999999998      56999999998653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.76  E-value=3.2e-18  Score=114.29  Aligned_cols=104  Identities=17%  Similarity=0.218  Sum_probs=72.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH----HHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH----LSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||..|+|||.+. ...++.++|+||+|+++|+|++|+.||.......    ...............              
T Consensus       155 ~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  219 (279)
T cd06619         155 GTNAYMAPERIS-GEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV--------------  219 (279)
T ss_pred             CChhhcCceeec-CCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCC--------------
Confidence            577899999955 4478899999999999999999999995421100    001111100000000              


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                               ......+.++.+|+.+||+.+|.+||+++++++|+||.....+
T Consensus       220 ---------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~  262 (279)
T cd06619         220 ---------LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDG  262 (279)
T ss_pred             ---------CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCc
Confidence                     0012256788999999999999999999999999999876544

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.76  E-value=4.9e-18  Score=113.62  Aligned_cols=103  Identities=19%  Similarity=0.238  Sum_probs=73.6

Q ss_pred             ccCcccchhhhcCCC-----CCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHH-HHHHhCCCCCCCCCCccchHHHhh
Q 048170            2 VEFPYKAPESRICSS-----VYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL-IVRLFGNPTKETWPGANYISELLH   75 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~-----~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   75 (142)
                      ++..|++||.+.+..     .++.++|+||+||++++|++|..||.......... +..........             
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------  229 (286)
T cd06622         163 GCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPT-------------  229 (286)
T ss_pred             CccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCC-------------
Confidence            456799999854321     35788999999999999999999996543222211 11111111111             


Q ss_pred             cCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           76 SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                                  ....++.++.+|+.+||..+|++||+++++++||||......
T Consensus       230 ------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~  271 (286)
T cd06622         230 ------------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA  271 (286)
T ss_pred             ------------CCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence                        112367889999999999999999999999999999876544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.76  E-value=5.8e-18  Score=111.97  Aligned_cols=100  Identities=22%  Similarity=0.378  Sum_probs=71.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC--hhH-HHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDH-LSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ++..|++||.+. ...++.++|+||+|+++++|++|..||....  ... ...+........... +             
T Consensus       161 ~~~~y~~PE~~~-~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------  225 (265)
T cd06605         161 GTSSYMAPERIQ-GNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRL-P-------------  225 (265)
T ss_pred             CChhccCHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCC-C-------------
Confidence            567899999954 4488899999999999999999999986441  111 111111111110000 0             


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                                ....+.++.++|.+||..+|++||++.+++.||||+..
T Consensus       226 ----------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         226 ----------SGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             ----------hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence                      01167789999999999999999999999999999765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.76  E-value=6.4e-19  Score=122.19  Aligned_cols=99  Identities=21%  Similarity=0.288  Sum_probs=72.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|+.||...........+.....  ....                 
T Consensus       206 gt~~y~aPE~~~-~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~-----------------  265 (376)
T cd05598         206 GTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWET--TLHI-----------------  265 (376)
T ss_pred             CCccccCHHHHc-CCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCc--cccC-----------------
Confidence            788999999954 45789999999999999999999999976644332221111000  0000                 


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC---CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV---TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~---t~~~~l~~~~~~~~  126 (142)
                           ......+.++.++|.+|+ .+|.+|+   ++.++++||||..+
T Consensus       266 -----~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         266 -----PSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             -----CCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence                 001236778999999976 5999999   99999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=8.2e-19  Score=121.71  Aligned_cols=98  Identities=19%  Similarity=0.264  Sum_probs=70.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||........ ..+......   ...+               
T Consensus       210 gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---~~~p---------------  270 (377)
T cd05629         210 GTPDYIAPEIFL-QQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRET---LYFP---------------  270 (377)
T ss_pred             CCccccCHHHHc-cCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCc---cCCC---------------
Confidence            788999999965 44789999999999999999999999976643322 222211000   0000               


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCC---CCHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHR---VTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R---~t~~~~l~~~~~~~~  126 (142)
                             .....+.++++||.+||. +|.+|   +++.++++||||...
T Consensus       271 -------~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~  311 (377)
T cd05629         271 -------DDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV  311 (377)
T ss_pred             -------CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence                   001367789999999998 67765   599999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.76  E-value=3.3e-19  Score=121.12  Aligned_cols=96  Identities=18%  Similarity=0.221  Sum_probs=72.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||.+. ...++.++|+||+||++|+|++|+.||...........+.....                       
T Consensus       160 g~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~-----------------------  215 (318)
T cd05582         160 GTVEYMAPEVVN-RRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL-----------------------  215 (318)
T ss_pred             CChhhcCHHHHc-CCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence            678899999954 44788999999999999999999999976644332221110000                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~  126 (142)
                           ......+.++.+||.+||..||++|++     +.+++.|+||..+
T Consensus       216 -----~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         216 -----GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             -----CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence                 001236778999999999999999999     7789999999764

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.76  E-value=6.3e-18  Score=112.12  Aligned_cols=96  Identities=28%  Similarity=0.430  Sum_probs=69.1

Q ss_pred             ccCcccchhhhcCC-CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHH-HHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICS-SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI-VRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~-~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      |+..|++||.+... ..++.++|+||+|+++++|++|..||........... .......                    
T Consensus       171 ~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------  230 (268)
T cd06624         171 GTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIH--------------------  230 (268)
T ss_pred             CCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccC--------------------
Confidence            56789999986443 3478899999999999999999999864322111100 0000000                    


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                            .......+.++.+|+.+||..+|++||++++++.||||
T Consensus       231 ------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         231 ------PEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             ------CCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence                  00112367789999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.76  E-value=6.3e-18  Score=112.01  Aligned_cols=98  Identities=18%  Similarity=0.113  Sum_probs=67.8

Q ss_pred             ccCcccchhhhc--CCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRI--CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~--~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||..|+|||.+.  ....++.++|+||+||++|+|++|..||..................+ ...               
T Consensus       168 ~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~---------------  231 (267)
T cd06645         168 GTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQP-PKL---------------  231 (267)
T ss_pred             CcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCC-Ccc---------------
Confidence            678899999853  23457889999999999999999999986442211111111000000 000               


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCC
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGT  122 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~  122 (142)
                             .....++..+.+++.+||..+|++||+++++++|||
T Consensus       232 -------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         232 -------KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             -------cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence                   000125667899999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.75  E-value=5.7e-18  Score=111.48  Aligned_cols=94  Identities=20%  Similarity=0.285  Sum_probs=69.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+..|+|||.+. ...++.++|+||+|+++++|++|..||..........  .........                   
T Consensus       164 ~~~~~~ape~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~-------------------  221 (257)
T cd08225         164 GTPYYLSPEICQ-NRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL--KICQGYFAP-------------------  221 (257)
T ss_pred             CCccccCHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH--HHhcccCCC-------------------
Confidence            567799999854 4478899999999999999999999997553322211  111100000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                            .....+.++.+++.+||..+|++||+++++++||||
T Consensus       222 ------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         222 ------ISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             ------CCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence                  012366789999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.75  E-value=3.1e-18  Score=111.28  Aligned_cols=101  Identities=22%  Similarity=0.290  Sum_probs=76.4

Q ss_pred             ccCcccchhhhcC--CCCCChhhhHHHHHHHHHHHHhCCCCcCCC--ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRIC--SSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~--~~~~~~~~Diws~g~~l~~l~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      |-..|||||.+-.  ...|+-++||||+|++++||++|+.||.+.  +.+.+-.+..  ..++.-  +.           
T Consensus       253 GC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln--~ePP~L--~~-----------  317 (391)
T KOG0983|consen  253 GCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN--EEPPLL--PG-----------  317 (391)
T ss_pred             CCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh--cCCCCC--Cc-----------
Confidence            4467999998533  346889999999999999999999999886  3344443333  111111  10           


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                                 -.++++.+++|+..||.+|+.+||.-.++++|||+.....
T Consensus       318 -----------~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~  357 (391)
T KOG0983|consen  318 -----------HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYET  357 (391)
T ss_pred             -----------ccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecch
Confidence                       1237899999999999999999999999999999886543

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.75  E-value=5.4e-18  Score=111.54  Aligned_cols=94  Identities=23%  Similarity=0.227  Sum_probs=69.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+..|+|||++.+ ..++.++|+||+|+++++|++|+.||...........+.. +..+.                    
T Consensus       163 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~--------------------  220 (256)
T cd08529         163 GTPYYLSPELCED-KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIR-GVFPP--------------------  220 (256)
T ss_pred             cCccccCHHHhcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc-CCCCC--------------------
Confidence            4677999999554 4788999999999999999999999975543222211111 00000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                            .....+.++.+++.+|+..+|++||++.++++|||+
T Consensus       221 ------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         221 ------VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             ------CccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence                  001367789999999999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.75  E-value=6.8e-18  Score=111.05  Aligned_cols=94  Identities=24%  Similarity=0.316  Sum_probs=70.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|+|||.+. ...++.++|+||+|+++++|++|..||...........+.....  ..                   
T Consensus       163 ~~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~-------------------  220 (256)
T cd08220         163 GTPCYISPELCE-GKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTF--AP-------------------  220 (256)
T ss_pred             cCCcccCchhcc-CCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCC--CC-------------------
Confidence            466799999954 44688899999999999999999999976543332221111000  00                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                            .....+.++.+++.+||..+|++|||++++++||||
T Consensus       221 ------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         221 ------ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             ------CCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence                  012367789999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.75  E-value=3.1e-18  Score=118.09  Aligned_cols=98  Identities=27%  Similarity=0.342  Sum_probs=78.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.||+||++ ...+|+.++||||+||++|||.+-+..|.+.+...+ .++......+.+                   
T Consensus       168 GTp~YmcPEil-~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp-------------------  227 (426)
T KOG0589|consen  168 GTPYYMCPEIL-SDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP-------------------  227 (426)
T ss_pred             CCCcccCHHHh-CCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC-------------------
Confidence            89999999994 455999999999999999999999999987755444 334333222222                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                               ...+.+++.+++.||..+|..||++.+++.+|.+.....
T Consensus       228 ---------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~~~  266 (426)
T KOG0589|consen  228 ---------SMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRYLV  266 (426)
T ss_pred             ---------ccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhHHH
Confidence                     227889999999999999999999999999998775443

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=6.7e-18  Score=111.50  Aligned_cols=100  Identities=22%  Similarity=0.308  Sum_probs=73.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+.+. .++.++|+||+|+++++|++|..||...........+........                    
T Consensus       155 ~~~~y~~pe~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  213 (260)
T cd05611         155 GTPDYLAPETILGV-GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWP--------------------  213 (260)
T ss_pred             CCcCccChhhhcCC-CCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCC--------------------
Confidence            56789999996544 588999999999999999999999976644333222111110000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC---HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT---ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t---~~~~l~~~~~~~~  126 (142)
                          ......++.++.+++.+||..+|++||+   +++++.||||.+.
T Consensus       214 ----~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~  257 (260)
T cd05611         214 ----EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI  257 (260)
T ss_pred             ----CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence                0011246788999999999999999995   5799999999865

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.75  E-value=1.8e-18  Score=117.89  Aligned_cols=96  Identities=21%  Similarity=0.215  Sum_probs=72.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||...........+..  . +.                    
T Consensus       158 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~--~-~~--------------------  213 (325)
T cd05602         158 GTPEYLAPEVLH-KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN--K-PL--------------------  213 (325)
T ss_pred             CCccccCHHHHc-CCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh--C-Cc--------------------
Confidence            688999999954 45788999999999999999999999976544332221110  0 00                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHH----HHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN----DALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~----~~l~~~~~~~~  126 (142)
                           ......+.++.+++.+||+.||.+|+++.    ++++|+||...
T Consensus       214 -----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~  257 (325)
T cd05602         214 -----QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI  257 (325)
T ss_pred             -----CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence                 01134678899999999999999999865    89999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.75  E-value=9.2e-19  Score=119.28  Aligned_cols=96  Identities=23%  Similarity=0.257  Sum_probs=72.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++. ...++.++|+||+||++|+|++|..||...........+..  . ..                    
T Consensus       158 gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~--~-~~--------------------  213 (325)
T cd05604         158 GTPEYLAPEVIR-KQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH--K-PL--------------------  213 (325)
T ss_pred             CChhhCCHHHHc-CCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc--C-Cc--------------------
Confidence            688899999954 44788999999999999999999999976644332221110  0 00                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH----HHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA----NDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~----~~~l~~~~~~~~  126 (142)
                           ......+.++.+++.+||..+|.+|+++    .++++||||...
T Consensus       214 -----~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         214 -----VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             -----cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence                 0012367788999999999999999976    589999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.75  E-value=1.4e-17  Score=109.94  Aligned_cols=94  Identities=21%  Similarity=0.319  Sum_probs=70.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+. ...++.++|+||+|+++++|++|..||...........+....   ..                   
T Consensus       172 ~~~~~~~pE~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~-------------------  228 (265)
T cd08217         172 GTPYYMSPEQLN-HMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK---FR-------------------  228 (265)
T ss_pred             cCCCccChhhhc-CCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC---CC-------------------
Confidence            467899999954 4468899999999999999999999997654333222221100   00                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                           ......+.++.+++.+||..+|++||+++++++|||+
T Consensus       229 -----~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         229 -----RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             -----CCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence                 0112367788999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.75  E-value=2e-18  Score=117.42  Aligned_cols=96  Identities=22%  Similarity=0.248  Sum_probs=72.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||...+.......+.  ..+ .                    
T Consensus       158 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~--~~~-~--------------------  213 (321)
T cd05603         158 GTPEYLAPEVLR-KEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNIL--HKP-L--------------------  213 (321)
T ss_pred             CCcccCCHHHhc-CCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHh--cCC-C--------------------
Confidence            678899999954 4478899999999999999999999997665433322211  100 0                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH----HHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA----NDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~----~~~l~~~~~~~~  126 (142)
                           ......+.++.+++.+||..||.+|+++    .++++|+||..+
T Consensus       214 -----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~  257 (321)
T cd05603         214 -----QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI  257 (321)
T ss_pred             -----CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence                 0112356788999999999999999875    589999999854

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.74  E-value=1.3e-17  Score=113.20  Aligned_cols=99  Identities=18%  Similarity=0.142  Sum_probs=72.0

Q ss_pred             ccCcccchhhhcC--CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH-HHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRIC--SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~--~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      |+..|++||.+..  ...++.++|+||+|+++++|++|..||....... ...+.. ... +..                
T Consensus       179 ~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~-~~~-~~~----------------  240 (313)
T cd06633         179 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NDS-PTL----------------  240 (313)
T ss_pred             ccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-cCC-CCC----------------
Confidence            5678999998642  3468889999999999999999999986553322 222211 110 000                


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                               .....+....+|+.+||+.+|.+||++.++++||||+...
T Consensus       241 ---------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~  280 (313)
T cd06633         241 ---------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR  280 (313)
T ss_pred             ---------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence                     0122556789999999999999999999999999998643

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.74  E-value=6e-18  Score=112.75  Aligned_cols=99  Identities=19%  Similarity=0.190  Sum_probs=71.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+. ...++.++|+||+|+++++|++|..|+...........+.   .....                   
T Consensus       163 ~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~---~~~~~-------------------  219 (277)
T cd06642         163 GTPFWMAPEVIK-QSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP---KNSPP-------------------  219 (277)
T ss_pred             CcccccCHHHhC-cCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhh---cCCCC-------------------
Confidence            467799999954 4478899999999999999999999986442222111110   00000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                           ......+.++.+++.+|+..+|++||++.++++|+||.....
T Consensus       220 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  261 (277)
T cd06642         220 -----TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTK  261 (277)
T ss_pred             -----CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHhh
Confidence                 001235678899999999999999999999999999986543

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.74  E-value=3.8e-19  Score=133.81  Aligned_cols=101  Identities=24%  Similarity=0.271  Sum_probs=77.2

Q ss_pred             ccCcccchhhhcCC--CCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICS--SVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~--~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||+.|||||++.+.  ++...+.||||+|||+.||++|+.|+..- +.-++...+...-.|..+                
T Consensus      1400 GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P---------------- 1463 (1509)
T KOG4645|consen 1400 GTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIP---------------- 1463 (1509)
T ss_pred             CCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCc----------------
Confidence            89999999998765  45778999999999999999999999644 222332222221111111                


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                                 ..++.+.++||..||..||+.|+++.|++.|.|-+...+.
T Consensus      1464 -----------~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1464 -----------ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTDE 1503 (1509)
T ss_pred             -----------hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccccccc
Confidence                       2278899999999999999999999999999998866543

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.74  E-value=1.6e-17  Score=111.65  Aligned_cols=102  Identities=25%  Similarity=0.256  Sum_probs=74.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +|..|++||.+. ...++.++|+||+|+++++|++|..||...........+.....   ...                 
T Consensus       178 ~~~~y~~pE~~~-~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~-----------------  236 (292)
T cd06657         178 GTPYWMAPELIS-RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PKL-----------------  236 (292)
T ss_pred             cCccccCHHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC---ccc-----------------
Confidence            567799999854 44678899999999999999999999976533222222211000   000                 


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                           ......+.++.+++.+||..+|.+||++.+++.|+||.....+
T Consensus       237 -----~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~  279 (292)
T cd06657         237 -----KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP  279 (292)
T ss_pred             -----CCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCC
Confidence                 0012256778999999999999999999999999999976543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.74  E-value=8.3e-18  Score=112.55  Aligned_cols=101  Identities=22%  Similarity=0.300  Sum_probs=73.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+. ...++.++|+||+|+++|+|++|..||...........+.....+...                   
T Consensus       178 ~~~~y~~PE~~~-~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------  237 (286)
T cd06614         178 GTPYWMAPEVIK-RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLK-------------------  237 (286)
T ss_pred             CCcccCCHhHhc-CCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCc-------------------
Confidence            456799999854 447889999999999999999999999755333222211111110000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                            ....++.++.+++.+||..+|.+||++.++++|+||.....
T Consensus       238 ------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  278 (286)
T cd06614         238 ------NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACP  278 (286)
T ss_pred             ------chhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccCc
Confidence                  01225678899999999999999999999999999998543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.74  E-value=8.2e-19  Score=112.14  Aligned_cols=95  Identities=25%  Similarity=0.414  Sum_probs=64.6

Q ss_pred             CccCcccchhhhcCC--CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            1 EVEFPYKAPESRICS--SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         1 ~~t~~y~~PE~~~~~--~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      +.|..|+|||.+...  ...+.++||||+||+||+|+.|..||.-.        ++..+. .      .....+-..+++
T Consensus       199 ~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~--------~~~GgS-l------aLAv~n~q~s~P  263 (302)
T KOG2345|consen  199 RCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI--------YQQGGS-L------ALAVQNAQISIP  263 (302)
T ss_pred             hCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH--------hhcCCe-E------EEeeeccccccC
Confidence            468899999985432  24778999999999999999999999522        111110 0      000000001111


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                      +.         ...++.++.|++.||+.||.+||++.+++.
T Consensus       264 ~~---------~~yse~l~~lik~mlqvdP~qRP~i~~ll~  295 (302)
T KOG2345|consen  264 NS---------SRYSEALHQLIKSMLQVDPNQRPTIPELLS  295 (302)
T ss_pred             CC---------CCccHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence            11         127889999999999999999999999874

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.74  E-value=1.8e-18  Score=119.31  Aligned_cols=99  Identities=20%  Similarity=0.276  Sum_probs=71.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||...........+.....  ....             +.  
T Consensus       198 gt~~Y~APE~~~-~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~--~~~~-------------p~--  259 (360)
T cd05627         198 GTPDYIAPEVFM-QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKE--TLVF-------------PP--  259 (360)
T ss_pred             CCccccCHHHHc-CCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCC--ceec-------------CC--
Confidence            788999999965 44889999999999999999999999976644333222211000  0000             00  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC---CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV---TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~---t~~~~l~~~~~~~~  126 (142)
                             ....+.++++||.+++ .||.+|+   ++.++++||||..+
T Consensus       260 -------~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         260 -------EVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             -------CCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCC
Confidence                   0126778999999976 4999998   48999999999865

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.74  E-value=1.4e-17  Score=110.31  Aligned_cols=98  Identities=28%  Similarity=0.441  Sum_probs=70.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh-HHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD-HLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|++||.+.+ ..++.++|+||+|+++++|++|..||...... ....+..........                  
T Consensus       170 ~~~~~~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------  230 (268)
T cd06630         170 GTIAFMAPEVLRG-EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAP------------------  230 (268)
T ss_pred             cccceeCHhHhcc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCC------------------
Confidence            4567999999544 47889999999999999999999999644221 111111111000000                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                            ......+.++.+++.+||..+|.+||++.++++||||+
T Consensus       231 ------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         231 ------SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             ------CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence                  01123677889999999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.74  E-value=8.6e-18  Score=113.62  Aligned_cols=100  Identities=15%  Similarity=0.103  Sum_probs=72.1

Q ss_pred             ccCcccchhhhcC--CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRIC--SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~--~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ++..|+|||++.+  ...++.++|+||+|+++|+|++|+.||...........+....  ....                
T Consensus       173 ~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~----------------  234 (307)
T cd06607         173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND--SPTL----------------  234 (307)
T ss_pred             CCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCC--CCCC----------------
Confidence            4678999998642  3468889999999999999999999986553322211111000  0000                


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                       .       ....+.++.+++.+||..+|++||++.+++.|+||....
T Consensus       235 -~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  274 (307)
T cd06607         235 -S-------SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER  274 (307)
T ss_pred             -C-------chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence             0       012566789999999999999999999999999998654

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.74  E-value=2.3e-18  Score=114.00  Aligned_cols=122  Identities=21%  Similarity=0.293  Sum_probs=88.1

Q ss_pred             ccCcccchhhhc----CCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCc---cch-HH
Q 048170            2 VEFPYKAPESRI----CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGA---NYI-SE   72 (142)
Q Consensus         2 ~t~~y~~PE~~~----~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~   72 (142)
                      |+-.|||||+.-    ....|+..+|.||+|+|+|-|+.|.+||.+. +.+.              .|...   ..- ..
T Consensus       248 GSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC--------------GWdrGe~Cr~CQ~~  313 (463)
T KOG0607|consen  248 GSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC--------------GWDRGEVCRVCQNK  313 (463)
T ss_pred             cchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC--------------CccCCCccHHHHHH
Confidence            456799999742    2346999999999999999999999999654 2211              01111   111 22


Q ss_pred             HhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccccccccc
Q 048170           73 LLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTV  137 (142)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~~~~~~  137 (142)
                      ++.++......-+..-+..++.+.+++++.+|..|+..|.++.++++|||++.+.....+..+.+
T Consensus       314 LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ekalptp~v  378 (463)
T KOG0607|consen  314 LFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEKALPTPQV  378 (463)
T ss_pred             HHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhccCCCCcc
Confidence            33444444444455556779999999999999999999999999999999998776655555443

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.74  E-value=1.3e-17  Score=110.21  Aligned_cols=100  Identities=20%  Similarity=0.329  Sum_probs=72.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+. ...++.++|+||+|+++|+|++|..||.....+................                  
T Consensus       154 ~~~~~~~PE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------  214 (262)
T cd05572         154 GTPEYVAPEIIL-NKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLE------------------  214 (262)
T ss_pred             CCcCccChhHhc-CCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCC------------------
Confidence            467899999954 4478899999999999999999999997554211111111110000000                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~  126 (142)
                            .....+.++.+++.+||..+|++|++     ++++++||||.+.
T Consensus       215 ------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         215 ------FPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             ------CCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence                  01124678899999999999999999     9999999999875

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.74  E-value=9e-18  Score=111.97  Aligned_cols=100  Identities=21%  Similarity=0.188  Sum_probs=73.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|+|||.+.+ ...+.++|+||+|+++|+|++|..||...........+....  ++                    
T Consensus       163 ~~~~y~apE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~--~~--------------------  219 (277)
T cd06640         163 GTPFWMAPEVIQQ-SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN--PP--------------------  219 (277)
T ss_pred             CcccccCHhHhcc-CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC--CC--------------------
Confidence            4677999999554 478899999999999999999999986543322111110000  00                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                           ......+..+.+++.+||..+|++||+++++++|+||.....+
T Consensus       220 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  262 (277)
T cd06640         220 -----TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKK  262 (277)
T ss_pred             -----CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcchh
Confidence                 0112256678899999999999999999999999999876543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.74  E-value=1e-17  Score=112.69  Aligned_cols=106  Identities=18%  Similarity=0.269  Sum_probs=73.9

Q ss_pred             ccCcccchhhhcCC---CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICS---SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~---~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ++..|+|||.+.+.   ..++.++|+||+|+++++|++|+.||...... ............... +             
T Consensus       176 ~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~-~-------------  240 (296)
T cd06618         176 GCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-FEVLTKILQEEPPSL-P-------------  240 (296)
T ss_pred             CCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-HHHHHHHhcCCCCCC-C-------------
Confidence            45679999986433   24778999999999999999999999654221 111111111110000 0             


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAH  131 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~  131 (142)
                               .....+.++.+|+.+||..||++||+++++++|+||.....+..
T Consensus       241 ---------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~  284 (296)
T cd06618         241 ---------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETAEV  284 (296)
T ss_pred             ---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccchhHH
Confidence                     00125678899999999999999999999999999997655543

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.74  E-value=1.9e-17  Score=111.85  Aligned_cols=99  Identities=25%  Similarity=0.207  Sum_probs=72.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|+|||.+.+ ..++.++|+||+|+++++|++|..||.+.................+..                  
T Consensus       178 ~~~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~------------------  238 (305)
T cd05609         178 GTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEG------------------  238 (305)
T ss_pred             cCccccCchhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCc------------------
Confidence            4567999999554 478899999999999999999999997654433322221111000000                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC---HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT---ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t---~~~~l~~~~~~~~  126 (142)
                             ....+.++.+++.+||..+|++||+   +.++++||||...
T Consensus       239 -------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~  279 (305)
T cd05609         239 -------DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL  279 (305)
T ss_pred             -------cccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence                   0126778999999999999999998   7899999999653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.74  E-value=1.4e-17  Score=110.57  Aligned_cols=100  Identities=22%  Similarity=0.356  Sum_probs=70.1

Q ss_pred             ccCcccchhhhcCCC-CCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSS-VYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~-~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      |+..|++||.+.... .++.++|+||+|++++++++|..||.......  .............                 
T Consensus       172 ~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~-----------------  232 (272)
T cd06629         172 GSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA--AMFKLGNKRSAPP-----------------  232 (272)
T ss_pred             CCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH--HHHHhhccccCCc-----------------
Confidence            567799999965443 47889999999999999999999986442211  1111110000000                 


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                         ........++.++++++.+||..+|.+||+++++++||||
T Consensus       233 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         233 ---IPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             ---CCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence               0001123467899999999999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.73  E-value=4.3e-19  Score=116.86  Aligned_cols=100  Identities=20%  Similarity=0.203  Sum_probs=75.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||++|||||++. .-.|+..+||||+|++..||+.|++||....+  ...++-.-..+++..                  
T Consensus       191 GTPFWMAPEVI~-EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP--MRAIFMIPT~PPPTF------------------  249 (502)
T KOG0574|consen  191 GTPFWMAPEVIE-EIGYDTKADIWSLGITAIEMAEGRPPYSDIHP--MRAIFMIPTKPPPTF------------------  249 (502)
T ss_pred             cCcccccHHHHH-HhccchhhhHhhhcchhhhhhcCCCCcccccc--cceeEeccCCCCCCC------------------
Confidence            899999999954 44899999999999999999999999963322  222222112222221                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                           ......+.++.+|++.||...|++|.||-++++|+|+++..
T Consensus       250 -----~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~  290 (502)
T KOG0574|consen  250 -----KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP  290 (502)
T ss_pred             -----CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence                 11233788999999999999999999999999999998653

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.73  E-value=3e-17  Score=108.08  Aligned_cols=96  Identities=22%  Similarity=0.245  Sum_probs=69.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+.....++.++|+||+|+++++|++|+.||................. .+                    
T Consensus       163 ~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~--------------------  221 (258)
T cd06632         163 GSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKE-LP--------------------  221 (258)
T ss_pred             CCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhccc-CC--------------------
Confidence            577899999965443488999999999999999999999965532111111110000 00                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                           ......+.++.+++.+||..+|++||++++++.|||+
T Consensus       222 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         222 -----PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             -----CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence                 0112367788999999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.73  E-value=5.3e-18  Score=115.90  Aligned_cols=102  Identities=14%  Similarity=0.177  Sum_probs=71.4

Q ss_pred             ccCcccchhhhcC----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRIC----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||+.|+|||++.+    ...++.++|+||+||++|+|++|+.||...+.......+.  .......              
T Consensus       165 gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~--~~~~~~~--------------  228 (332)
T cd05623         165 GTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM--NHKERFQ--------------  228 (332)
T ss_pred             cCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHh--CCCcccc--------------
Confidence            6889999999652    3467889999999999999999999997664333222111  1000000              


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCC--CCCHHHHhcCCCccch
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDH--RVTANDALCIGTSEKL  126 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~--R~t~~~~l~~~~~~~~  126 (142)
                             .......++.++++|+.+||..++++  |++++++++||||..+
T Consensus       229 -------~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         229 -------FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             -------CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence                   00111347889999999999765544  6899999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.73  E-value=1.7e-17  Score=111.34  Aligned_cols=97  Identities=24%  Similarity=0.258  Sum_probs=72.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +|..|++||.+. ....+.++|+||+|+++++|++|+.||...........+.. +.  .                    
T Consensus       160 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~--~--------------------  215 (290)
T cd05580         160 GTPEYLAPEIIL-SKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE-GK--V--------------------  215 (290)
T ss_pred             CCccccChhhhc-CCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-CC--c--------------------
Confidence            577899999854 44788899999999999999999999976543222221110 00  0                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~~  127 (142)
                           ......+..+.+++.+||..||.+|+     +++++++||||..+.
T Consensus       216 -----~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         216 -----RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             -----cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence                 00123577889999999999999999     899999999998653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.73  E-value=7.2e-18  Score=113.39  Aligned_cols=103  Identities=20%  Similarity=0.242  Sum_probs=73.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+.. ..++.++|+||+|++++++++|+.||...............+.  +.                   
T Consensus       177 ~~~~y~~PE~~~~-~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~-------------------  234 (293)
T cd06647         177 GTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT--PE-------------------  234 (293)
T ss_pred             CChhhcCchhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC--CC-------------------
Confidence            4667999999544 4788899999999999999999999965422111000000000  00                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                          .......+...++++.+||..+|.+||++.+++.|+||+....-.
T Consensus       235 ----~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~  279 (293)
T cd06647         235 ----LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLS  279 (293)
T ss_pred             ----CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcccc
Confidence                000123567789999999999999999999999999999776433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.73  E-value=1.5e-17  Score=109.87  Aligned_cols=101  Identities=20%  Similarity=0.238  Sum_probs=72.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+. ...++.++|+||+|+++|+|++|..||......................                  
T Consensus       162 ~~~~y~~pE~~~-~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------------------  222 (264)
T cd06623         162 GTVTYMSPERIQ-GESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPS------------------  222 (264)
T ss_pred             ecccccCHhhhC-CCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCC------------------
Confidence            456799999954 4488899999999999999999999996553211111111111100000                  


Q ss_pred             CchhHhhhcC-CCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHG-LEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                            .... .+..+.+++.+||..+|++||++.++++|||++...
T Consensus       223 ------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~~  263 (264)
T cd06623         223 ------LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD  263 (264)
T ss_pred             ------CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence                  0122 577899999999999999999999999999997653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.73  E-value=2.7e-17  Score=112.87  Aligned_cols=92  Identities=20%  Similarity=0.243  Sum_probs=70.3

Q ss_pred             CccCcccchhhhcC-CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            1 EVEFPYKAPESRIC-SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         1 ~~t~~y~~PE~~~~-~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      .||..|||||++.+ ...|+.++||||||+++|||++|+.||......+....+...+..+...                
T Consensus       205 ~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p----------------  268 (362)
T KOG0192|consen  205 AGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP----------------  268 (362)
T ss_pred             CCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC----------------
Confidence            38999999999664 4589999999999999999999999998775544333322212111111                


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                                ..++..+..|+.+|+..||+.||++.+++
T Consensus       269 ----------~~~~~~l~~l~~~CW~~dp~~RP~f~ei~  297 (362)
T KOG0192|consen  269 ----------KECPPHLSSLMERCWLVDPSRRPSFLEIV  297 (362)
T ss_pred             ----------ccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence                      22677889999999999999999998865

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=6.1e-18  Score=112.41  Aligned_cols=96  Identities=25%  Similarity=0.334  Sum_probs=77.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||+ +....|+.++|.|.+|+++|||++|+.||...+...+-.++-.-+.                       
T Consensus       330 GTPEYLAPEV-leDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~-----------------------  385 (516)
T KOG0690|consen  330 GTPEYLAPEV-LEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL-----------------------  385 (516)
T ss_pred             CChhhcCchh-hccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc-----------------------
Confidence            7999999999 5566899999999999999999999999977655554444332111                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~  126 (142)
                           .....++++++.|+.++|..||.+|+.     |.++.+|+||..+
T Consensus       386 -----kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v  430 (516)
T KOG0690|consen  386 -----KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV  430 (516)
T ss_pred             -----cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence                 112347899999999999999999984     7899999999965

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.73  E-value=2.1e-17  Score=111.81  Aligned_cols=99  Identities=19%  Similarity=0.137  Sum_probs=71.5

Q ss_pred             ccCcccchhhhcC--CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH-HHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRIC--SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~--~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      +|..|+|||.+.+  ...++.++|+||+|+++++|++|..||....... ...+.. ...+...                
T Consensus       173 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~----------------  235 (308)
T cd06634         173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPALQ----------------  235 (308)
T ss_pred             CCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhh-cCCCCcC----------------
Confidence            5678999998643  3457889999999999999999999986542221 111111 0000000                


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                                ....+..+.+||.+||..+|++||+++++++|+|+....
T Consensus       236 ----------~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~  274 (308)
T cd06634         236 ----------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER  274 (308)
T ss_pred             ----------cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence                      123567789999999999999999999999999988643

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.73  E-value=1.9e-17  Score=110.76  Aligned_cols=96  Identities=24%  Similarity=0.249  Sum_probs=68.3

Q ss_pred             ccCcccchhhhcC----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRIC----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      ||..|+|||++.+    ...++.++|+||+||++++|++|+.||..... .....+..  ...+..              
T Consensus       186 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~--~~~~~~--------------  249 (286)
T cd06638         186 GTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPR--NPPPTL--------------  249 (286)
T ss_pred             CCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccc--cCCCcc--------------
Confidence            6778999998643    23578899999999999999999999865422 11111100  000000              


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                                ......+.++.+|+.+||..||++||++.++++|+||
T Consensus       250 ----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         250 ----------HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             ----------cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence                      0011246678999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.73  E-value=1.6e-17  Score=110.73  Aligned_cols=99  Identities=25%  Similarity=0.318  Sum_probs=71.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh-HHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD-HLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|++||.+.+. .++.++|+||+|+++++|++|+.||...... ....+.......                     
T Consensus       156 ~~~~y~~PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------  213 (277)
T cd05577         156 GTPGYMAPEVLQGE-VYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEM---------------------  213 (277)
T ss_pred             CCCCcCCHHHhcCC-CCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccc---------------------
Confidence            45679999995544 6888999999999999999999999655321 111111110000                     


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                          ........+.++.++|.+||..+|++|+     ++.++++||||...
T Consensus       214 ----~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~  260 (277)
T cd05577         214 ----AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL  260 (277)
T ss_pred             ----cccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence                0011133678899999999999999999     89999999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.73  E-value=1.6e-17  Score=111.32  Aligned_cols=108  Identities=19%  Similarity=0.205  Sum_probs=72.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh---hHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK---DHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ++..|++||.+. ...++.++|+||+|+++|+|++|..||.....   .... .............             .
T Consensus       165 ~~~~y~~pE~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~-------------~  229 (287)
T cd06621         165 GTSFYMAPERIQ-GKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIE-LLSYIVNMPNPEL-------------K  229 (287)
T ss_pred             CCccccCHHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHH-HHHHHhcCCchhh-------------c
Confidence            467899999954 44788999999999999999999999965421   1111 1111110000000             0


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      .     ........+.++.+|+.+||..+|++|||+.++++|+||.....+
T Consensus       230 ~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~~  275 (287)
T cd06621         230 D-----EPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMKK  275 (287)
T ss_pred             c-----CCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccccc
Confidence            0     000001235678999999999999999999999999999866544

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.73  E-value=1.4e-17  Score=111.19  Aligned_cols=99  Identities=23%  Similarity=0.306  Sum_probs=71.8

Q ss_pred             ccCcccchhhhcCC---CCCChhhhHHHHHHHHHHHHhCCCCcCCCC--hhHHHHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRICS---SVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~~---~~~~~~~Diws~g~~l~~l~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      +|..|++||.+.+.   ..++.++|+||+||++++|++|+.||....  .........   ...... +           
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~-~-----------  229 (283)
T cd06617         165 GCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE---EPSPQL-P-----------  229 (283)
T ss_pred             CCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh---cCCCCC-C-----------
Confidence            56789999986432   357889999999999999999999996431  122221111   000000 0           


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                                  ....+.++.+++.+||..+|.+||+++++++|+||....
T Consensus       230 ------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  268 (283)
T cd06617         230 ------------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL  268 (283)
T ss_pred             ------------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence                        012577899999999999999999999999999999764

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.73  E-value=5e-18  Score=111.87  Aligned_cols=100  Identities=26%  Similarity=0.399  Sum_probs=70.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||+.......+.++|+||+|+++++|++|..||..... .....+..........             ...  
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-------------~~~--  224 (260)
T PF00069_consen  160 GTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS-------------SSQ--  224 (260)
T ss_dssp             SSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH-------------HTT--
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc-------------ccc--
Confidence            577899999955366899999999999999999999999976522 2222221111100000             000  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                             .......++.+++.+||..||++||++.++++||||
T Consensus       225 -------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  225 -------QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             -------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             -------ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence                   000122688999999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.73  E-value=7.6e-18  Score=116.72  Aligned_cols=100  Identities=18%  Similarity=0.168  Sum_probs=70.8

Q ss_pred             ccCcccchhhhcCC---CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICS---SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~---~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||+.|+|||++.+.   ..++.++|+||+||++|+|++|..||........ ..+......   ...+            
T Consensus       205 gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~---~~~p------------  269 (370)
T cd05621         205 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNS---LNFP------------  269 (370)
T ss_pred             CCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcc---cCCC------------
Confidence            78899999996543   2378899999999999999999999976643222 222211000   0000            


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCC--CCCHHHHhcCCCccch
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDH--RVTANDALCIGTSEKL  126 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~--R~t~~~~l~~~~~~~~  126 (142)
                                .....+..+++++.+||..++.+  |++++++++||||+..
T Consensus       270 ----------~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         270 ----------EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             ----------CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence                      00136788999999999855543  8899999999999863

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=2.7e-17  Score=108.53  Aligned_cols=98  Identities=19%  Similarity=0.198  Sum_probs=68.7

Q ss_pred             ccCcccchhhhcCC--CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICS--SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~--~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ++..|++||.+.+.  ..++.++|+||+|+++++|++|+.||......................                
T Consensus       163 ~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----------------  226 (262)
T cd06613         163 GTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKL----------------  226 (262)
T ss_pred             CCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccc----------------
Confidence            46679999985432  267889999999999999999999997654332222211111000000                


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCC
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGT  122 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~  122 (142)
                             ......+.++.+|+.+||..+|..||++++++.|+|
T Consensus       227 -------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         227 -------KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             -------cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence                   001124567899999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.73  E-value=3.3e-17  Score=109.03  Aligned_cols=93  Identities=23%  Similarity=0.360  Sum_probs=70.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||... ....+.++|+||+|++++++++|..||...........+.....                       
T Consensus       184 ~~~~~~~Pe~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----------------------  239 (280)
T cd05581         184 GTAEYVSPELLN-EKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEY-----------------------  239 (280)
T ss_pred             CCccccCHHHhC-CCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCC-----------------------
Confidence            467799999854 44788899999999999999999999976643222111111000                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH----HHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA----NDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~----~~~l~~~~~  123 (142)
                           ......+..+.+|+.+||..+|++||++    +++++||||
T Consensus       240 -----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         240 -----SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             -----CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence                 0012257788999999999999999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.73  E-value=6.7e-18  Score=126.67  Aligned_cols=95  Identities=15%  Similarity=0.067  Sum_probs=66.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||++|||||++.+. .++.++||||+||++|||+++..++..... ....+... .. ++..                  
T Consensus       177 gt~~Y~APE~~~~~-~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-~~~~~~~~-~~-~~~~------------------  234 (793)
T PLN00181        177 EMSWYTSPEEDNGS-SSNCASDVYRLGVLLFELFCPVSSREEKSR-TMSSLRHR-VL-PPQI------------------  234 (793)
T ss_pred             CCcceEChhhhccC-CCCchhhhhhHHHHHHHHhhCCCchhhHHH-HHHHHHHh-hc-Chhh------------------
Confidence            57889999996544 789999999999999999998877642211 11111110 00 0000                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                              ........+++.+||.++|.+||++.++++||||...
T Consensus       235 --------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        235 --------LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             --------hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence                    0012345688899999999999999999999999764

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.73  E-value=2.9e-17  Score=108.49  Aligned_cols=94  Identities=24%  Similarity=0.310  Sum_probs=69.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+..|++||.+. ...++.++|+||+|+++++|++|..||..........  .......+.                   
T Consensus       167 ~~~~~~~pe~~~-~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~-------------------  224 (260)
T cd08222         167 GTPYYMSPEALK-HQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVL--RIVEGPTPS-------------------  224 (260)
T ss_pred             CCcCccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH--HHHcCCCCC-------------------
Confidence            567899999854 4467888999999999999999999986543222111  111110000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                            .....+.++.+++.+||..+|++||+++++++||||
T Consensus       225 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         225 ------LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             ------CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence                  012356788999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.72  E-value=1.9e-17  Score=109.76  Aligned_cols=98  Identities=18%  Similarity=0.135  Sum_probs=66.9

Q ss_pred             ccCcccchhhhcC--CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRIC--SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~--~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      |+..|+|||.+..  ...++.++|+||+|+++++|++|+.||................. ...                 
T Consensus       168 ~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~-----------------  229 (267)
T cd06646         168 GTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNF-QPP-----------------  229 (267)
T ss_pred             cCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCC-CCC-----------------
Confidence            5678999998542  34577899999999999999999998853322111000000000 000                 


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCC
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGT  122 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~  122 (142)
                          .. ......+.++.+|+.+||..+|++||+++++++|+|
T Consensus       230 ----~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         230 ----KL-KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             ----CC-ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence                00 001235778999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.72  E-value=1.3e-17  Score=115.53  Aligned_cols=101  Identities=17%  Similarity=0.145  Sum_probs=70.7

Q ss_pred             ccCcccchhhhcCC---CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICS---SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~---~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+.   ..++.++|+||+||++|+|++|..||.+.........+....  .....+             
T Consensus       205 gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~--~~~~~~-------------  269 (371)
T cd05622         205 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK--NSLTFP-------------  269 (371)
T ss_pred             cCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CcccCC-------------
Confidence            78899999996543   237889999999999999999999998664433222211100  000000             


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCC--CCCHHHHhcCCCccch
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDH--RVTANDALCIGTSEKL  126 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~--R~t~~~~l~~~~~~~~  126 (142)
                               .....+.++++||.+||..++.+  |++++++++|+||.+.
T Consensus       270 ---------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         270 ---------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             ---------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence                     01237888999999999844433  7799999999999763

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.72  E-value=5.1e-17  Score=108.69  Aligned_cols=109  Identities=22%  Similarity=0.267  Sum_probs=70.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|++||++.+ ..++.++|+||+||+++++++|..||...........             ...........+....
T Consensus       164 ~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~  229 (284)
T cd06620         164 GTSTYMSPERIQG-GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQD-------------DPMGILDLLQQIVQEP  229 (284)
T ss_pred             cCcccCCHHHHcc-CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhh-------------hhhHHHHHHHHHhhcc
Confidence            5778999999654 4788899999999999999999999975422100000             0000000000000000


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                      .....  ...++.++.+|+.+|+..||.+||+++++++|+||.+.
T Consensus       230 ~~~~~--~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         230 PPRLP--SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             CCCCC--chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            00000  01256678999999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.72  E-value=3.5e-17  Score=107.97  Aligned_cols=98  Identities=21%  Similarity=0.319  Sum_probs=71.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||..... ..+.++|+||+|++++++++|..||.............. +......                  
T Consensus       163 ~~~~~~~Pe~~~~~-~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~------------------  222 (265)
T cd05579         163 GTPDYIAPEVILGQ-GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN-GKIEWPE------------------  222 (265)
T ss_pred             cCccccCHHHhcCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-CCcCCCc------------------
Confidence            34579999995444 688899999999999999999999976644332222111 0000000                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH---HHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA---NDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~---~~~l~~~~~~~~  126 (142)
                             ....+.++.+++.+||+.+|.+|||+   .++++||||.++
T Consensus       223 -------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~  263 (265)
T cd05579         223 -------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI  263 (265)
T ss_pred             -------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence                   01147788999999999999999999   999999999865

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=2.4e-17  Score=112.64  Aligned_cols=101  Identities=17%  Similarity=0.200  Sum_probs=70.5

Q ss_pred             ccCcccchhhhcC----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRIC----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      ||+.|+|||++.+    ...++.++|+||+||++|+|++|+.||........ ..+.......                 
T Consensus       165 gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~-----------------  227 (331)
T cd05597         165 GTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHF-----------------  227 (331)
T ss_pred             ccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcc-----------------
Confidence            6889999999653    23577899999999999999999999976543322 2221110000                 


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCC--CCCHHHHhcCCCccch
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDH--RVTANDALCIGTSEKL  126 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~--R~t~~~~l~~~~~~~~  126 (142)
                             .........+.++++|+.+||+.++++  |++++++++||||...
T Consensus       228 -------~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         228 -------QFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             -------cCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence                   000011236888999999999764444  7899999999999764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.72  E-value=5.7e-17  Score=106.10  Aligned_cols=95  Identities=20%  Similarity=0.195  Sum_probs=68.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+.+. ..+.++|+||+|+++++|++|..||.................  ... ..               
T Consensus       159 ~~~~~~~PE~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~-~~---------------  219 (253)
T cd05122         159 GTPYWMAPEVINGK-PYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGP--PGL-RN---------------  219 (253)
T ss_pred             cCCcccCHHHHcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCC--CCc-Cc---------------
Confidence            56779999995544 588899999999999999999999965532222111111000  000 00               


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCC
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGT  122 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~  122 (142)
                             ....+.++.+++.+||..||++||++.++++|||
T Consensus       220 -------~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         220 -------PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             -------ccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence                   0113678899999999999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.72  E-value=5.1e-17  Score=110.37  Aligned_cols=98  Identities=20%  Similarity=0.172  Sum_probs=71.5

Q ss_pred             ccCcccchhhhcC--CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh-HHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRIC--SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD-HLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~--~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ++..|++||.+..  ...++.++|+||+|+++++|++|+.||...... ....+... ..+...                
T Consensus       183 ~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~----------------  245 (317)
T cd06635         183 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPTLQ----------------  245 (317)
T ss_pred             CCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc-cCCCCC----------------
Confidence            5678999998642  346888999999999999999999998655322 22222211 100000                


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                                ....+..+++|+.+||+.+|.+||++.++++|+|+...
T Consensus       246 ----------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~  283 (317)
T cd06635         246 ----------SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE  283 (317)
T ss_pred             ----------CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence                      01256678999999999999999999999999998643

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.72  E-value=4.1e-17  Score=108.79  Aligned_cols=99  Identities=18%  Similarity=0.197  Sum_probs=72.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+. ....+.++|+||+|+++++|++|..||...........+....   ..                   
T Consensus       163 ~~~~y~~PE~~~-~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~-------------------  219 (277)
T cd06641         163 GTPFWMAPEVIK-QSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN---PP-------------------  219 (277)
T ss_pred             CCccccChhhhc-cCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC---CC-------------------
Confidence            567799999854 4477889999999999999999999986543322221111000   00                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                           ......+.++.+++.+||..+|.+||+++++++|+||.+...
T Consensus       220 -----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~~  261 (277)
T cd06641         220 -----TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAK  261 (277)
T ss_pred             -----CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhhh
Confidence                 011236778999999999999999999999999999987543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.72  E-value=5.3e-17  Score=107.54  Aligned_cols=95  Identities=20%  Similarity=0.297  Sum_probs=68.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +|..|+|||.+.+ ..++.++|+||+|+++|+|++|+.||.......  .+......+....                  
T Consensus       171 ~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~------------------  229 (265)
T cd06652         171 GTPYWMSPEVISG-EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA--AIFKIATQPTNPV------------------  229 (265)
T ss_pred             CCccccChhhhcC-CCCCcchhHHHHHHHHHHHhhCCCCCCccchHH--HHHHHhcCCCCCC------------------
Confidence            5778999999654 478899999999999999999999996542211  1111111111000                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                            .....+..+.+++.+|+. +|++||+++++++|+|+.
T Consensus       230 ------~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         230 ------LPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             ------CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence                  012356778899999995 899999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.71  E-value=4.1e-18  Score=120.08  Aligned_cols=92  Identities=18%  Similarity=0.198  Sum_probs=68.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|||||++... ..+.++||||||+|||||++|..||..-+..  + ||.  +......              .   
T Consensus       273 GTVaWMAPEvIrne-PcsEKVDIwSfGVVLWEmLT~EiPYkdVdss--A-IIw--GVGsNsL--------------~---  329 (904)
T KOG4721|consen  273 GTVAWMAPEVIRNE-PCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS--A-IIW--GVGSNSL--------------H---  329 (904)
T ss_pred             hhHhhhCHHHhhcC-CcccccceehhHHHHHHHHhcCCCccccchh--e-eEE--eccCCcc--------------c---
Confidence            79999999996544 8999999999999999999999999643221  1 111  1111100              0   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                          ......+++.++-|++.|++-.|.+||++.+++.|
T Consensus       330 ----LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~H  364 (904)
T KOG4721|consen  330 ----LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLH  364 (904)
T ss_pred             ----ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence                01124488899999999999999999999999876

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.71  E-value=4.1e-17  Score=103.88  Aligned_cols=95  Identities=17%  Similarity=0.238  Sum_probs=77.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||.-|.+||. ..+..++..+|+|++|++.||++.|.+||.........+.+...+...+                    
T Consensus       184 gt~dyl~pEm-v~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p--------------------  242 (281)
T KOG0580|consen  184 GTLDYLPPEM-VEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP--------------------  242 (281)
T ss_pred             cccccCCHhh-cCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC--------------------
Confidence            7888999999 4555899999999999999999999999987755444444443332222                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                              ..++.+++|+|.+||..+|.+|....+++.|||+..
T Consensus       243 --------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  243 --------STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             --------cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence                    237899999999999999999999999999999864

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.71  E-value=8.6e-17  Score=106.27  Aligned_cols=97  Identities=28%  Similarity=0.392  Sum_probs=69.3

Q ss_pred             ccCcccchhhhcCCC--CCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSS--VYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~--~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ++..|++||.+.+..  ..+.++|+||+|++++++++|+.||..... ......+.. +  .....+             
T Consensus       165 ~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~--~~~~~~-------------  228 (264)
T cd06626         165 GTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-G--HKPPIP-------------  228 (264)
T ss_pred             CCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-C--CCCCCC-------------
Confidence            467899999965432  378899999999999999999999965522 221111111 1  000000             


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                               .....+....+++.+||..+|++||++.+++.|||+
T Consensus       229 ---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         229 ---------DSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             ---------cccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence                     012257788999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.71  E-value=5.7e-17  Score=106.35  Aligned_cols=93  Identities=24%  Similarity=0.327  Sum_probs=69.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||...+ ...+.++|+||+|++++++++|..||...........+.. ..  .                    
T Consensus       155 ~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-~~--~--------------------  210 (250)
T cd05123         155 GTPEYLAPEVLLG-KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK-DP--L--------------------  210 (250)
T ss_pred             CCccccChHHhCC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc-CC--C--------------------
Confidence            4678999999544 4678899999999999999999999965543222222111 00  0                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH---HHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA---NDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~---~~~l~~~~~  123 (142)
                           ......+.++.+++.+||..||++||++   +++++||||
T Consensus       211 -----~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         211 -----RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             -----CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence                 0012247788999999999999999999   899999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.71  E-value=3.8e-17  Score=107.34  Aligned_cols=94  Identities=21%  Similarity=0.256  Sum_probs=70.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+..|++||.+. ...++.++|+||+|+++++|++|..||.............  ... ...                  
T Consensus       165 ~~~~y~~pe~~~-~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~--~~~-~~~------------------  222 (258)
T cd08215         165 GTPYYLSPELCQ-NKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKIL--KGQ-YPP------------------  222 (258)
T ss_pred             eeecccChhHhc-cCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHh--cCC-CCC------------------
Confidence            466799999854 4468899999999999999999999996554332222111  100 000                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                            .....+.++.+++.+||..+|.+||++.++++||||
T Consensus       223 ------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         223 ------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             ------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence                  011367889999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.71  E-value=3.3e-17  Score=108.10  Aligned_cols=96  Identities=18%  Similarity=0.171  Sum_probs=70.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+..|++||.+. ...++.++|+||+|+++++|++|..||..........+..........                   
T Consensus       161 ~~~~y~~PE~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------  220 (258)
T cd05578         161 GTPGYMAPEVLC-RQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVL-------------------  220 (258)
T ss_pred             CChhhcCHHHHc-ccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcccccc-------------------
Confidence            466799999954 446889999999999999999999999766432222222211110000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH--HHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA--NDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~--~~~l~~~~~  123 (142)
                            .....+.++.++|.+||..||.+|+++  +++++||||
T Consensus       221 ------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         221 ------YPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             ------CcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence                  112356789999999999999999999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.71  E-value=5e-17  Score=117.71  Aligned_cols=116  Identities=20%  Similarity=0.179  Sum_probs=67.7

Q ss_pred             ccCcccchhhhcCCC---------------------CCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCC
Q 048170            2 VEFPYKAPESRICSS---------------------VYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPT   60 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~---------------------~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~   60 (142)
                      +|+.|+|||.+....                     .++.++||||+||++|||+++..++.. ........+...+.. 
T Consensus       319 ~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~-~~~~~~~~l~~~~~~-  396 (566)
T PLN03225        319 LDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS-NLIQFNRQLKRNDYD-  396 (566)
T ss_pred             cCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch-HHHHHHHHHHhcCCc-
Confidence            567899999754321                     234456999999999999987554321 112222222221110 


Q ss_pred             CCCCCCccchHHHhhcCCCCCCchhH---hhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           61 KETWPGANYISELLHSLPQCEPADLA---EKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                               ...+.............   +.......+..+||.+||++||++|||++++++||||.....
T Consensus       397 ---------~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        397 ---------LVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL  458 (566)
T ss_pred             ---------HHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence                     11111111111111111   111223345569999999999999999999999999986543

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.71  E-value=8.8e-17  Score=105.58  Aligned_cols=96  Identities=24%  Similarity=0.343  Sum_probs=69.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+. ....+.++|+||+|+++++|++|..||..... ..............                    
T Consensus       165 ~~~~y~~pE~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~--------------------  222 (260)
T cd06606         165 GTPYWMAPEVIR-GEEYGRAADIWSLGCTVIEMATGKPPWSELGN-PMAALYKIGSSGEP--------------------  222 (260)
T ss_pred             CCccccCHhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-hHHHHHhccccCCC--------------------
Confidence            466799999954 44688999999999999999999999975541 11111111100000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                          .......+.++.+|+.+||..+|++||++.++++||||
T Consensus       223 ----~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         223 ----PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             ----cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence                01112357789999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.71  E-value=1.1e-16  Score=105.43  Aligned_cols=94  Identities=26%  Similarity=0.332  Sum_probs=70.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +|..|+|||.+.+. .++.++|+||+|+++++|++|..||...........+.. +.....                   
T Consensus       163 ~~~~y~ape~~~~~-~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~-------------------  221 (256)
T cd08221         163 GTPYYMSPELCQGV-KYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ-GNYTPV-------------------  221 (256)
T ss_pred             CCccccCHhhcCCC-CCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc-CCCCCC-------------------
Confidence            57789999995544 678889999999999999999999976533322221111 100000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                             ....+.++.+++.+||..+|.+||+++++++|+|+
T Consensus       222 -------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         222 -------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             -------ccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence                   02367789999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.70  E-value=7.3e-17  Score=107.76  Aligned_cols=90  Identities=16%  Similarity=0.200  Sum_probs=66.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|+.|+|||.+.+ ..++.++|+||+||++|+|++ |..||.+.........+......                     
T Consensus       188 ~~~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~---------------------  245 (283)
T cd05048         188 LPVRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLL---------------------  245 (283)
T ss_pred             ccccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC---------------------
Confidence            3567999998554 478899999999999999997 98898766444333322211000                     


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            .....++.++.+|+.+||+.||.+||+++++++
T Consensus       246 ------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~  278 (283)
T cd05048         246 ------PCPEDCPARVYALMIECWNEIPARRPRFKDIHT  278 (283)
T ss_pred             ------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                  001237889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.70  E-value=9.5e-18  Score=109.29  Aligned_cols=124  Identities=31%  Similarity=0.474  Sum_probs=90.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHH--hhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISEL--LHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~   78 (142)
                      +|-+|+|||++++...|+.++||||+||++.|++-.+..|+.. ..+++..|...+|.+..+.......-.+.  ...-.
T Consensus       219 VTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~  298 (449)
T KOG0664|consen  219 VTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGL  298 (449)
T ss_pred             HHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCC
Confidence            4678999999999999999999999999999999999999877 56788889999998776543322111111  11111


Q ss_pred             CCCCchhHhhh---c--CCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           79 QCEPADLAEKT---H--GLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        79 ~~~~~~~~~~~---~--~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                        .......+.   +  ....+..+++..+|.+||++|.+.++++.|++..+.+
T Consensus       299 --k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R  350 (449)
T KOG0664|consen  299 --RAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR  350 (449)
T ss_pred             --CCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence              111111111   1  2334567888999999999999999999999987543

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.70  E-value=1.4e-17  Score=112.94  Aligned_cols=127  Identities=24%  Similarity=0.345  Sum_probs=85.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC--ChhHHHHHHHHhCCCC--------CC--CCCCcc-
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPT--------KE--TWPGAN-   68 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~--~~~~~~~~~~~~~~~~--------~~--~~~~~~-   68 (142)
                      ||++|+|||+++....-+.++||||.|+++..++++..||.-.  +...+.++...+|...        ..  .+.... 
T Consensus       239 GT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~  318 (418)
T KOG1167|consen  239 GTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNI  318 (418)
T ss_pred             CCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccc
Confidence            8999999999988878899999999999999999999988544  4455666666655321        11  111000 


Q ss_pred             -chHHHh---hc-----CCCCCC--chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           69 -YISELL---HS-----LPQCEP--ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        69 -~~~~~~---~~-----~~~~~~--~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                       ...+..   .+     +.....  ...+......+..+.+|+.+||..||.+|.||+++|+||||.....
T Consensus       319 ~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~~  389 (418)
T KOG1167|consen  319 PTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEADR  389 (418)
T ss_pred             cccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchhh
Confidence             111111   11     111111  1112222334557899999999999999999999999999996543

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.69  E-value=2.4e-16  Score=103.65  Aligned_cols=94  Identities=21%  Similarity=0.285  Sum_probs=70.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+. ...++.++|+||+|+++++|++|+.||...+.......+..... +                     
T Consensus       163 ~~~~~~~Pe~~~-~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-~---------------------  219 (256)
T cd08530         163 GTPHYMAPEVWK-GRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY-P---------------------  219 (256)
T ss_pred             CCccccCHHHHC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-C---------------------
Confidence            567899999954 44788899999999999999999999976644333222211000 0                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                           ......+.++++++.+||..+|++||++.++++||++
T Consensus       220 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         220 -----PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             -----CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence                 0011357789999999999999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.69  E-value=1.1e-16  Score=109.54  Aligned_cols=90  Identities=22%  Similarity=0.318  Sum_probs=64.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      +|..|+|||++.+ ..++.++||||+|+++|+|++ |..||.+... ............   .                 
T Consensus       238 ~~~~y~aPE~~~~-~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~---~-----------------  296 (338)
T cd05102         238 LPLKWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTR---M-----------------  296 (338)
T ss_pred             CCccccCcHHhhc-CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCC---C-----------------
Confidence            3567999999654 478999999999999999997 9999976522 222111110000   0                 


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ......+.++.+|+.+||..||++||++.++++
T Consensus       297 -------~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         297 -------RAPENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             -------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                   001235678999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.69  E-value=8.5e-17  Score=109.99  Aligned_cols=95  Identities=24%  Similarity=0.321  Sum_probs=76.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+-|+|||++. -..|+.++|.|++|++||||+.|++||.+.+.+.+ ..|.....                       
T Consensus       512 GTPdYiAPEIi~-YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv-----------------------  567 (683)
T KOG0696|consen  512 GTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV-----------------------  567 (683)
T ss_pred             CCCcccccceEE-ecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC-----------------------
Confidence            799999999954 55999999999999999999999999998865544 33322111                       


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCH-----HHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA-----NDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~-----~~~l~~~~~~~~  126 (142)
                            ...++++.++.++.+..|...|.+|+.+     .++..||||+.+
T Consensus       568 ------syPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~i  612 (683)
T KOG0696|consen  568 ------SYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRI  612 (683)
T ss_pred             ------cCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhc
Confidence                  1124588999999999999999999875     368999999964

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.69  E-value=1.5e-16  Score=106.05  Aligned_cols=89  Identities=17%  Similarity=0.259  Sum_probs=64.9

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||++. ...++.++|+||+|+++++|++ |..||...........+..... .                     
T Consensus       187 ~~~y~aPE~~~-~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~-~---------------------  243 (280)
T cd05049         187 PIRWMPPESIM-YRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRL-L---------------------  243 (280)
T ss_pred             cceecChhhhc-cCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCc-C---------------------
Confidence            45699999955 4478999999999999999998 9999865533332222211000 0                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           ......+.++.+++.+||..||++||++.++++
T Consensus       244 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         244 -----QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             -----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                 001236778999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.68  E-value=1.7e-16  Score=105.14  Aligned_cols=90  Identities=16%  Similarity=0.132  Sum_probs=63.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHH-hCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMV-SGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||.+.....++.++||||+|+++|+|+ .|..|+..........+....   ...                  
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~---~~~------------------  228 (262)
T cd05077         170 ERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQ---CML------------------  228 (262)
T ss_pred             ccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcC---ccC------------------
Confidence            4677999998655567899999999999999997 477777544322222111100   000                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                              ......++.+|+.+||..||.+||++.+++++
T Consensus       229 --------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         229 --------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             --------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence                    01134578899999999999999999999854

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=2.3e-16  Score=103.56  Aligned_cols=94  Identities=24%  Similarity=0.301  Sum_probs=69.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||...+ ...+.++|+|++|+++++|++|..||.........  .........                    
T Consensus       161 ~~~~y~~pe~~~~-~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~--~~~~~~~~~--------------------  217 (254)
T cd06627         161 GTPYWMAPEVIEM-SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAAL--FRIVQDDHP--------------------  217 (254)
T ss_pred             cchhhcCHhhhcC-CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHH--HHHhccCCC--------------------
Confidence            5677999998544 45888999999999999999999998654322111  111000000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                           ......+.++.+++.+||..+|++||++++++.|+||
T Consensus       218 -----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         218 -----PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             -----CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence                 0112367789999999999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.68  E-value=2.4e-16  Score=105.10  Aligned_cols=89  Identities=18%  Similarity=0.310  Sum_probs=65.7

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|+|||++.+ ..++.++||||+||++|+|++ |..||...........+......  .                    
T Consensus       185 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~--~--------------------  241 (277)
T cd05036         185 IKWMPPEAFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRL--D--------------------  241 (277)
T ss_pred             HhhCCHHHHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC--C--------------------
Confidence            46999999654 479999999999999999996 88999765443333322211100  0                    


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                           ....++..+.+++.+|+..+|++||+++++++|
T Consensus       242 -----~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         242 -----PPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             -----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                 012367788999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.68  E-value=2.7e-16  Score=103.89  Aligned_cols=90  Identities=16%  Similarity=0.147  Sum_probs=63.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCC-CCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK-PLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|+|||.+.+...++.++|+||+|+++|+|++|. .|+................                       
T Consensus       166 ~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~-----------------------  222 (258)
T cd05078         166 ERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDRH-----------------------  222 (258)
T ss_pred             ccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHccc-----------------------
Confidence            5678999999665556889999999999999999984 6664433322221111000                       


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                            ......+.++.+|+.+||+.+|++||+++++++.
T Consensus       223 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         223 ------QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             ------cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence                  0001234678999999999999999999998853

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=7e-17  Score=114.45  Aligned_cols=100  Identities=20%  Similarity=0.162  Sum_probs=78.6

Q ss_pred             ccCcccchhhhc--CCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRI--CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~--~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||++|||||+++  ..+.|+-++||||+|+++.||+..++|+..- ..+.++.|... +.|...                
T Consensus       184 GTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN-esPtLq----------------  246 (948)
T KOG0577|consen  184 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPTLQ----------------  246 (948)
T ss_pred             CCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc-CCCCCC----------------
Confidence            899999999975  4568999999999999999999999887644 44555555432 111110                


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                                ....+..++.|+..||+.-|.+|||.+++++|+|+..-+.
T Consensus       247 ----------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp  286 (948)
T KOG0577|consen  247 ----------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERP  286 (948)
T ss_pred             ----------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCC
Confidence                      1236888999999999999999999999999999876543

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.67  E-value=4.8e-16  Score=104.23  Aligned_cols=96  Identities=18%  Similarity=0.254  Sum_probs=69.4

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+||++++|++ |..||...........+...+..                      
T Consensus       184 ~~~y~~pE~~~-~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~----------------------  240 (288)
T cd05061         184 PVRWMAPESLK-DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL----------------------  240 (288)
T ss_pred             cccccCHHHhc-cCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------------------
Confidence            45699999954 4478899999999999999998 68888655433322221110000                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc------CCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC------IGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~------~~~~~~~  126 (142)
                           ......+.++.+++.+||+.||++||++.++++      ||||..+
T Consensus       241 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~  286 (288)
T cd05061         241 -----DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV  286 (288)
T ss_pred             -----CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence                 001235678999999999999999999999875      8888765

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.67  E-value=1.8e-16  Score=104.36  Aligned_cols=91  Identities=24%  Similarity=0.270  Sum_probs=66.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+..|+|||++. ...++.++|+||+|+++++|++|..||...........+......+                     
T Consensus       162 ~~~~~~aPE~~~-~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------  219 (255)
T cd08219         162 GTPYYVPPEIWE-NMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP---------------------  219 (255)
T ss_pred             CCccccCHHHHc-cCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC---------------------
Confidence            567799999954 4478899999999999999999999997654433222221111000                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                            .....+..+.+|+.+||..||++||++.+++.-
T Consensus       220 ------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         220 ------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             ------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence                  012256778999999999999999999999854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.67  E-value=1.1e-16  Score=113.32  Aligned_cols=96  Identities=20%  Similarity=0.171  Sum_probs=77.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.+||||++  ...|+..+||||||..+.||.++.+||..+ +.-++++.+.....|..                   
T Consensus       206 GTPEFMAPEmY--EE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s-------------------  264 (632)
T KOG0584|consen  206 GTPEFMAPEMY--EENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA-------------------  264 (632)
T ss_pred             cCccccChHHH--hhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH-------------------
Confidence            89999999984  358999999999999999999999999766 66666655442221111                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                             +.+--.+++++||.+||.. .+.|+++.++|+|+||..-
T Consensus       265 -------l~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  265 -------LSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             -------hhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence                   1122467899999999999 8999999999999999964

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.67  E-value=3.6e-16  Score=104.44  Aligned_cols=89  Identities=15%  Similarity=0.172  Sum_probs=65.4

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+.+. .++.++|+||+||++++|++ |..||.+.....+...+.....   ..                  
T Consensus       189 ~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~---~~------------------  246 (283)
T cd05091         189 PIRWMSPEAIMYG-KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQV---LP------------------  246 (283)
T ss_pred             CccccCHHHHhcC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc---CC------------------
Confidence            5679999996544 68899999999999999997 7788866544333322221110   00                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            ....++..+.+|+.+||+.+|.+||++++++.
T Consensus       247 ------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~  278 (283)
T cd05091         247 ------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS  278 (283)
T ss_pred             ------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence                  01236778899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.67  E-value=5.8e-16  Score=102.21  Aligned_cols=88  Identities=17%  Similarity=0.207  Sum_probs=65.4

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+ ....++.++|+||+|+++|+|++ |..||...........+.....+.                     
T Consensus       161 ~~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~---------------------  218 (257)
T cd05116         161 PVKWYAPECM-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERME---------------------  218 (257)
T ss_pred             CccccCHhHh-ccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCC---------------------
Confidence            4579999985 44478889999999999999997 999997664443333332111100                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                            .....+.++.++|.+|++.||++||++++|.
T Consensus       219 ------~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~  249 (257)
T cd05116         219 ------CPQRCPPEMYDLMKLCWTYGVDERPGFAVVE  249 (257)
T ss_pred             ------CCCCCCHHHHHHHHHHhccCchhCcCHHHHH
Confidence                  0123678899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.67  E-value=9.5e-17  Score=109.71  Aligned_cols=102  Identities=15%  Similarity=0.174  Sum_probs=70.6

Q ss_pred             ccCcccchhhhcCC----CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICS----SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~----~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||+.|+|||++.+.    ..++.++|+||+|+++|+|++|+.||...........+.....  ..               
T Consensus       165 gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~--~~---------------  227 (331)
T cd05624         165 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEE--RF---------------  227 (331)
T ss_pred             CCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCC--cc---------------
Confidence            68899999986532    3578899999999999999999999976543322211111000  00               


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCC--CCCHHHHhcCCCccch
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDH--RVTANDALCIGTSEKL  126 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~--R~t~~~~l~~~~~~~~  126 (142)
                            ........++.++++|+.+||..++++  |++++++++|+||..+
T Consensus       228 ------~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         228 ------QFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             ------cCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence                  000111336789999999999876544  4689999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.66  E-value=2.7e-16  Score=106.54  Aligned_cols=99  Identities=24%  Similarity=0.302  Sum_probs=74.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |++.|||||++. ..+|+.++|+||+|+++|+|++|+.||.......+...++......+.                   
T Consensus       176 GSplYMAPEV~~-~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~-------------------  235 (429)
T KOG0595|consen  176 GSPLYMAPEVIM-SQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPV-------------------  235 (429)
T ss_pred             CCccccCHHHHH-hccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCc-------------------
Confidence            789999999955 559999999999999999999999999877555444333321111110                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                            .....+...++|+...|..++..|.+..+.+.|++++.-
T Consensus       236 ------~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~  274 (429)
T KOG0595|consen  236 ------LPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAAN  274 (429)
T ss_pred             ------hhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccC
Confidence                  112366777899999999999999999988888887743

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.66  E-value=5.6e-16  Score=103.84  Aligned_cols=102  Identities=19%  Similarity=0.220  Sum_probs=70.6

Q ss_pred             ccCcccchhhhcCCC-CCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSS-VYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~-~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      |+..|++||.+.+.. ..+.++|+||+|+++++|++|..||..... .....+.........                  
T Consensus       168 ~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~------------------  229 (288)
T cd05583         168 GTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKP------------------  229 (288)
T ss_pred             CCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCC------------------
Confidence            567899999954432 367899999999999999999999964321 111111111000000                  


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCC---HHHHhcCCCccchhh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT---ANDALCIGTSEKLLA  128 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t---~~~~l~~~~~~~~~~  128 (142)
                             .....++.++.+++.+||..||++|||   +.++++|+||+.+..
T Consensus       230 -------~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~  274 (288)
T cd05583         230 -------PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW  274 (288)
T ss_pred             -------CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence                   001236678899999999999999998   567899999997643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.66  E-value=1.7e-16  Score=103.70  Aligned_cols=89  Identities=28%  Similarity=0.383  Sum_probs=64.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+ ....++.++|+||+|+++++|++|..++...... .    .        ..             ..  
T Consensus       144 ~~~~y~aPE~~-~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~----~--------~~-------------~~--  194 (237)
T cd05576         144 VENMYCAPEVG-GISEETEACDWWSLGAILFELLTGKTLVECHPSG-I----N--------TH-------------TT--  194 (237)
T ss_pred             cCccccCCccc-CCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-c----c--------cc-------------cc--
Confidence            35569999984 4447888999999999999999998776422100 0    0        00             00  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH-----HHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA-----NDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~-----~~~l~~~~~  123 (142)
                          .......+..+++++.+||+.||++|+++     +++++||||
T Consensus       195 ----~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         195 ----LNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             ----cCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence                00112367789999999999999999985     899999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.66  E-value=6.2e-16  Score=103.69  Aligned_cols=88  Identities=16%  Similarity=0.249  Sum_probs=63.8

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+. ...++.++|+||+|+++++|++ |..||...........+..... ..                    
T Consensus       185 ~~~y~aPE~~~-~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~-~~--------------------  242 (288)
T cd05093         185 PIRWMPPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV-LQ--------------------  242 (288)
T ss_pred             cccccCHHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc-CC--------------------
Confidence            45799999954 4578899999999999999998 8888865543322221111000 00                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                            .....+.++.+|+.+||..||.+||++.+++
T Consensus       243 ------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~  273 (288)
T cd05093         243 ------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIH  273 (288)
T ss_pred             ------CCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence                  0123567899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.66  E-value=4.5e-16  Score=106.66  Aligned_cols=89  Identities=21%  Similarity=0.322  Sum_probs=64.1

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +..|+|||++.+ ..++.++|+||+||++++|++ |..||.+... ......+......                     
T Consensus       238 ~~~y~aPE~~~~-~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---------------------  295 (337)
T cd05054         238 PLKWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM---------------------  295 (337)
T ss_pred             CccccCcHHhcC-CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC---------------------
Confidence            467999999654 488999999999999999997 9999965422 2222211110000                     


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            ......+.++.+++.+||+.+|++||++.++++
T Consensus       296 ------~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~  328 (337)
T cd05054         296 ------RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVE  328 (337)
T ss_pred             ------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                  001235678899999999999999999999885

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.66  E-value=1.3e-15  Score=99.08  Aligned_cols=96  Identities=30%  Similarity=0.473  Sum_probs=69.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|++||... ...++.++|+|++|++++++++|..||... ..........   ........               
T Consensus       148 ~~~~~~~pE~~~-~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~---~~~~~~~~---------------  208 (244)
T smart00220      148 GTPEYMAPEVLL-GKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIG---KPKPPFPP---------------  208 (244)
T ss_pred             CCcCCCCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh---ccCCCCcc---------------
Confidence            467899999954 447788999999999999999999999763 3333222221   11111000               


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                             ....++.++.+++.+|+..+|++||++.++++||||
T Consensus       209 -------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      209 -------PEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             -------ccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence                   001156788999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.66  E-value=7.4e-16  Score=101.66  Aligned_cols=88  Identities=16%  Similarity=0.185  Sum_probs=65.0

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+ ....++.++|+||+|+++++|++ |..||...........+......                      
T Consensus       161 ~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------  217 (257)
T cd05060         161 PLKWYAPECI-NYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL----------------------  217 (257)
T ss_pred             cccccCHHHh-cCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC----------------------
Confidence            3569999985 44578899999999999999997 89999765443333332211100                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                           ......+..+.+++.+||..+|++||++.+++
T Consensus       218 -----~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~  249 (257)
T cd05060         218 -----PRPEECPQEIYSIMLSCWKYRPEDRPTFSELE  249 (257)
T ss_pred             -----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence                 01123667889999999999999999999886

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.65  E-value=6e-16  Score=103.15  Aligned_cols=89  Identities=19%  Similarity=0.262  Sum_probs=64.6

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+. ...++.++|+||+|+++|+|++ |..||...........+.....+.                     
T Consensus       184 ~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~---------------------  241 (277)
T cd05062         184 PVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLD---------------------  241 (277)
T ss_pred             CHhhcChhHhh-cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC---------------------
Confidence            55799999954 4478899999999999999998 688887654433322221111000                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            .....+..+.+++.+||+.+|++||++.++++
T Consensus       242 ------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  273 (277)
T cd05062         242 ------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  273 (277)
T ss_pred             ------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                  01235678899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.65  E-value=6.8e-16  Score=102.18  Aligned_cols=89  Identities=21%  Similarity=0.322  Sum_probs=65.1

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+|+++++|++ |..||.+.........+...-  ..                    
T Consensus       168 ~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~--~~--------------------  224 (263)
T cd05052         168 PIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY--RM--------------------  224 (263)
T ss_pred             ccccCCHHHhc-cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC--CC--------------------
Confidence            35699999854 4478889999999999999998 888987654433322221100  00                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           ......+.++.+++.+||..+|++||++.++++
T Consensus       225 -----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         225 -----ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             -----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence                 011336788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.65  E-value=7.7e-16  Score=102.00  Aligned_cols=91  Identities=24%  Similarity=0.295  Sum_probs=65.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh--HHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD--HLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ++..|+|||.+.+ ..++.++|+||+|+++++|++|..||......  .....+.....++..                 
T Consensus       168 ~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------  229 (267)
T cd08228         168 GTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLP-----------------  229 (267)
T ss_pred             CCccccChhhhcc-CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCC-----------------
Confidence            5678999999554 47888999999999999999999998654322  222222211111100                 


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                               ....+..+.+++.+||..+|++||+++++++
T Consensus       230 ---------~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~  260 (267)
T cd08228         230 ---------TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ  260 (267)
T ss_pred             ---------hhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence                     1125678899999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.65  E-value=7.5e-16  Score=103.43  Aligned_cols=88  Identities=17%  Similarity=0.267  Sum_probs=63.4

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+.+ ..++.++|+||+|+++++|++ |..||..............   ....                   
T Consensus       188 ~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~---~~~~-------------------  244 (291)
T cd05094         188 PIRWMPPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ---GRVL-------------------  244 (291)
T ss_pred             ceeecChHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC---CCCC-------------------
Confidence            567999999554 478889999999999999998 9999865533222111110   0000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                           ......+..+.+++.+||..+|++||++.+++
T Consensus       245 -----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~  276 (291)
T cd05094         245 -----ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIY  276 (291)
T ss_pred             -----CCCccCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence                 00122567889999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.65  E-value=6.9e-16  Score=103.47  Aligned_cols=101  Identities=18%  Similarity=0.266  Sum_probs=71.7

Q ss_pred             ccCcccchhhhcCC-CCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICS-SVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~-~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      |+..|++||.+.+. ..++.++|+||+|+++++|++|..||.... ......+..........                 
T Consensus       168 ~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----------------  230 (290)
T cd05613         168 GTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP-----------------  230 (290)
T ss_pred             CCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCC-----------------
Confidence            57789999996543 356788999999999999999999986431 11111121111100000                 


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~~  127 (142)
                              ....++..+.+++.+||..||.+|+     ++++++.||||....
T Consensus       231 --------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         231 --------YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             --------CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence                    0123677889999999999999997     889999999999765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.65  E-value=6.7e-16  Score=103.14  Aligned_cols=89  Identities=16%  Similarity=0.267  Sum_probs=63.9

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+. ...++.++|+||+||++|+|++ |..||................ ...                    
T Consensus       187 ~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~--------------------  244 (280)
T cd05092         187 PIRWMPPESIL-YRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGR-ELE--------------------  244 (280)
T ss_pred             cccccCHHHhc-cCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCc-cCC--------------------
Confidence            46799999854 4478899999999999999998 889986553322211111100 000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            ....++..+.+|+.+||..||.+||+++++++
T Consensus       245 ------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         245 ------RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             ------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                  01236778999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.65  E-value=6.7e-16  Score=107.21  Aligned_cols=89  Identities=24%  Similarity=0.315  Sum_probs=63.6

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +..|+|||++. ...++.++|+||+|+++|+|++ |..||..... .............  .                  
T Consensus       277 ~~~y~aPE~~~-~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~--~------------------  335 (374)
T cd05106         277 PVKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQM--S------------------  335 (374)
T ss_pred             ccceeCHHHhc-CCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCc--c------------------
Confidence            45699999965 4478999999999999999997 9999965522 1222221110000  0                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             .....+.++.+++.+||..||.+||++.++++
T Consensus       336 -------~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         336 -------RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             -------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                   00125678999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.65  E-value=7.9e-16  Score=101.47  Aligned_cols=89  Identities=19%  Similarity=0.182  Sum_probs=64.5

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+. ...++.++|+||+|+++++|++ |+.||...........+......   ..                 
T Consensus       164 ~~~y~aPE~~~-~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~---~~-----------------  222 (256)
T cd05114         164 PVKWSPPEVFN-FSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRL---YR-----------------  222 (256)
T ss_pred             chhhCChhhcc-cCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC---CC-----------------
Confidence            35699999954 4578899999999999999999 89999766443332222211100   00                 


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....+.++.+++.+|+..+|.+||+++++++
T Consensus       223 -------~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         223 -------PKLASMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             -------CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                   0114567899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=1.5e-15  Score=100.65  Aligned_cols=94  Identities=24%  Similarity=0.317  Sum_probs=69.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +|..|+|||.+.+ ...+.++|+||+|+++++|++|+.||.....  ...+......+....                  
T Consensus       171 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~------------------  229 (264)
T cd06653         171 GTPYWMSPEVISG-EGYGRKADVWSVACTVVEMLTEKPPWAEYEA--MAAIFKIATQPTKPM------------------  229 (264)
T ss_pred             CcccccCHhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccCH--HHHHHHHHcCCCCCC------------------
Confidence            5678999999554 4688899999999999999999999965422  112222222111111                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                            ....++.++.+++.+|+.. +..||++.+++.|||+
T Consensus       230 ------~p~~~~~~~~~~i~~~l~~-~~~r~~~~~~~~~~~~  264 (264)
T cd06653         230 ------LPDGVSDACRDFLKQIFVE-EKRRPTAEFLLRHPFV  264 (264)
T ss_pred             ------CCcccCHHHHHHHHHHhcC-cccCccHHHHhcCCCC
Confidence                  1134778899999999994 7999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.65  E-value=7e-16  Score=101.93  Aligned_cols=88  Identities=16%  Similarity=0.219  Sum_probs=63.5

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+. ...++.++|+||+|+++|+|++ |..||...........+.....  .                    
T Consensus       167 ~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~--~--------------------  223 (261)
T cd05072         167 PIKWTAPEAIN-FGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR--M--------------------  223 (261)
T ss_pred             ceecCCHHHhc-cCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC--C--------------------
Confidence            45699999954 4478889999999999999998 8999965533322222111000  0                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                           ......+.++.+++.+|+..+|++||+++++.
T Consensus       224 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~  255 (261)
T cd05072         224 -----PRMENCPDELYDIMKTCWKEKAEERPTFDYLQ  255 (261)
T ss_pred             -----CCCCCCCHHHHHHHHHHccCCcccCcCHHHHH
Confidence                 00123677899999999999999999999886

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.65  E-value=7.1e-16  Score=101.79  Aligned_cols=90  Identities=19%  Similarity=0.179  Sum_probs=64.6

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+|+++|+|++ |..||...........+......   .                  
T Consensus       164 ~~~y~~pe~~~-~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~------------------  221 (256)
T cd05113         164 PVRWSPPEVLL-YSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL---Y------------------  221 (256)
T ss_pred             ChhhCCHHHHh-cCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC---C------------------
Confidence            45699999954 4478899999999999999998 88998655433222221111100   0                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                            .....+..+++++.+||..+|.+||++.+++.+
T Consensus       222 ------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         222 ------RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             ------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence                  001256788999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.65  E-value=7.8e-16  Score=102.15  Aligned_cols=89  Identities=15%  Similarity=0.101  Sum_probs=64.4

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |..|+|||.+. ...++.++|+||+||+++++++ |..||...........+......                      
T Consensus       171 ~~~y~aPE~~~-~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~----------------------  227 (266)
T cd05064         171 PVLWAAPEAIQ-YHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL----------------------  227 (266)
T ss_pred             ceeecCHHHHh-hCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC----------------------
Confidence            46799999954 4588999999999999999764 99999765443322222110000                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           .....++..+.+++.+|+..+|.+||+++++++
T Consensus       228 -----~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         228 -----PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             -----CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence                 001236778999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.64  E-value=9.4e-16  Score=101.31  Aligned_cols=88  Identities=23%  Similarity=0.283  Sum_probs=62.8

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+. ...++.++|+||+|+++++|++ |..||...........+.....  .                    
T Consensus       166 ~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~--~--------------------  222 (260)
T cd05070         166 PIKWTAPEAAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR--M--------------------  222 (260)
T ss_pred             CccccChHHHh-cCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--C--------------------
Confidence            34699999854 4478889999999999999998 8888865533222111110000  0                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                           ......+.++.+|+.+||..+|++|||++++.
T Consensus       223 -----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~  254 (260)
T cd05070         223 -----PCPQDCPISLHELMLQCWKKDPEERPTFEYLQ  254 (260)
T ss_pred             -----CCCCcCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence                 00123667899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.64  E-value=8.5e-16  Score=103.49  Aligned_cols=89  Identities=26%  Similarity=0.222  Sum_probs=64.2

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|++||.+. ...++.++|+||+||++|+|++ |..||.............  .....                     
T Consensus       182 ~~y~aPE~~~-~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~--~~~~~---------------------  237 (297)
T cd05089         182 VRWMAIESLN-YSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLP--QGYRM---------------------  237 (297)
T ss_pred             ccccCchhhc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh--cCCCC---------------------
Confidence            4599999854 4478899999999999999997 999997654333222111  00000                     


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                          .....++.++.+|+.+||..+|.+||+++++++.
T Consensus       238 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         238 ----EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                0012367789999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.64  E-value=1.2e-15  Score=101.77  Aligned_cols=89  Identities=16%  Similarity=0.230  Sum_probs=65.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|+|||.+. ...++.++||||+|++++++++ |..||.......+...+.....  ...                 
T Consensus       181 ~~~~y~apE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~-----------------  240 (280)
T cd05043         181 RPVKWMALESLV-NKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYR--LAQ-----------------  240 (280)
T ss_pred             cchhccCHHHHh-cCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCC--CCC-----------------
Confidence            345699999954 4478999999999999999998 9999975544333332221000  000                 


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                              ...++.++.+++.+|+..||++||++.+++
T Consensus       241 --------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~  270 (280)
T cd05043         241 --------PINCPDELFAVMACCWALDPEERPSFSQLV  270 (280)
T ss_pred             --------CCcCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence                    012567889999999999999999999987

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.64  E-value=1.9e-15  Score=100.93  Aligned_cols=90  Identities=17%  Similarity=0.184  Sum_probs=66.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|++||.+.+ ..++.++|+||+|+++|++++ |..||.+........++......+..                  
T Consensus       173 ~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------  233 (279)
T cd05111         173 TPIKWMALESILF-GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQP------------------  233 (279)
T ss_pred             CcccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCC------------------
Confidence            4567999999544 478999999999999999997 99999766544443333321111100                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                               ...+.+..+++.+|+..+|++||++.++++
T Consensus       234 ---------~~~~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         234 ---------QICTIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             ---------CCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                     124567789999999999999999999875

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.64  E-value=1.6e-15  Score=99.89  Aligned_cols=91  Identities=22%  Similarity=0.298  Sum_probs=66.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|+|||.+.. ..++.++|+||+|+++++|++ |..||.................  .                   
T Consensus       169 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~--~-------------------  226 (262)
T cd00192         169 LPIRWMAPESLKD-GIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYR--L-------------------  226 (262)
T ss_pred             cCccccCHHHhcc-CCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--C-------------------
Confidence            4667999998544 478999999999999999998 5889976644333322221000  0                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                            .....++.++.+++.+||..+|++||++.+++++
T Consensus       227 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         227 ------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             ------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence                  0012357889999999999999999999999854

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.64  E-value=1.6e-15  Score=101.16  Aligned_cols=90  Identities=21%  Similarity=0.244  Sum_probs=64.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHH-hCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMV-SGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|+|||.+.+...++.++|+||+|+++|+|+ .|..||.................                  ++  
T Consensus       182 ~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------------------~~--  241 (274)
T cd05076         182 ERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKKHR------------------LP--  241 (274)
T ss_pred             cCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhccC------------------CC--
Confidence            4677999998666567899999999999999985 68888865533222222111000                  00  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                               .....++.+++.+||..+|++||++++++++
T Consensus       242 ---------~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         242 ---------EPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             ---------CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence                     1134568899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.64  E-value=2.6e-15  Score=99.65  Aligned_cols=91  Identities=20%  Similarity=0.221  Sum_probs=66.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+..|++||.+.+ ..++.++|+||+|+++|+|++|+.||...........+......+..                   
T Consensus       175 ~~~~~~~Pe~~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------  234 (269)
T cd08528         175 GTILYSCPEIVKN-EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLP-------------------  234 (269)
T ss_pred             CcccCcChhhhcC-CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCC-------------------
Confidence            5778999999654 46899999999999999999999999755433322221110000000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....+.++.+++.+||..||++||++.++..
T Consensus       235 -------~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~  265 (269)
T cd08528         235 -------EGMYSEDVTDVITSCLTPDAEARPDIIQVSA  265 (269)
T ss_pred             -------cccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence                   0125678899999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.63  E-value=1.6e-15  Score=100.26  Aligned_cols=88  Identities=24%  Similarity=0.330  Sum_probs=63.4

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||... ....+.++|+||+|+++|+|++ |..||.+.........+..  .....                   
T Consensus       166 ~~~y~~Pe~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~--~~~~~-------------------  223 (260)
T cd05069         166 PIKWTAPEAAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVER--GYRMP-------------------  223 (260)
T ss_pred             chhhCCHHHhc-cCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCCCC-------------------
Confidence            45699999854 4478899999999999999998 8899976533222211111  00000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                            .....+..+.+++.+||..||++||++++++
T Consensus       224 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~  254 (260)
T cd05069         224 ------CPQGCPESLHELMKLCWKKDPDERPTFEYIQ  254 (260)
T ss_pred             ------CCcccCHHHHHHHHHHccCCcccCcCHHHHH
Confidence                  0123567899999999999999999999886

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.63  E-value=1.9e-15  Score=101.74  Aligned_cols=96  Identities=8%  Similarity=0.053  Sum_probs=66.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||+.. ...++.++|+||+||++++|++|+.||... ...........                .+...+.+.
T Consensus       195 gt~~y~ape~~~-~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~----------------~~~~~~~~~  257 (294)
T PHA02882        195 GTLYYAGLDAHN-GACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC----------------DFIKRLHEG  257 (294)
T ss_pred             CCccccCHHHhC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH----------------HHHHHhhhh
Confidence            789999999954 557899999999999999999999999765 22221111100                000000000


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                      .     ......+.++.+++..|+..+|++||+.+++++
T Consensus       258 ~-----~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        258 K-----IKIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             h-----hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            0     011335778999999999999999999999874

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.63  E-value=2.1e-15  Score=99.90  Aligned_cols=90  Identities=20%  Similarity=0.288  Sum_probs=63.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH--HHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH--LSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ++..|+|||.+. ...++.++|+||+|+++++|++|..||.......  ....+.....++.                  
T Consensus       168 ~~~~~~ape~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------  228 (267)
T cd08229         168 GTPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPL------------------  228 (267)
T ss_pred             CCcCccCHHHhc-CCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCC------------------
Confidence            466799999954 4478889999999999999999999996543221  1111110000000                  


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                              .....+.++.+++.+||..+|.+|||+.+++
T Consensus       229 --------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~  259 (267)
T cd08229         229 --------PSDHYSEELRQLVNMCINPDPEKRPDITYVY  259 (267)
T ss_pred             --------CcccccHHHHHHHHHhcCCCcccCCCHHHHH
Confidence                    0123677899999999999999999999775

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.63  E-value=1.7e-15  Score=100.26  Aligned_cols=88  Identities=19%  Similarity=0.252  Sum_probs=63.1

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||... ...++.++|+||+|+++|+|++ |..||...........+.....  ..                   
T Consensus       166 ~~~y~~PE~~~-~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~--~~-------------------  223 (262)
T cd05071         166 PIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MP-------------------  223 (262)
T ss_pred             cceecCHhHhc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC--CC-------------------
Confidence            45699999854 4478999999999999999999 7888865533322221111000  00                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                            .....+..+.+++.+|+..+|++||++++++
T Consensus       224 ------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~  254 (262)
T cd05071         224 ------CPPECPESLHDLMCQCWRKEPEERPTFEYLQ  254 (262)
T ss_pred             ------CccccCHHHHHHHHHHccCCcccCCCHHHHH
Confidence                  0123567889999999999999999999876

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.63  E-value=2.6e-15  Score=99.68  Aligned_cols=89  Identities=22%  Similarity=0.327  Sum_probs=64.6

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.. ....++.++|+||+|+++|+|++ |+.||...........+......                      
T Consensus       177 ~~~~~~pe~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------  233 (272)
T cd05075         177 PVKWIAIESL-ADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRL----------------------  233 (272)
T ss_pred             CcccCCHHHc-cCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC----------------------
Confidence            4569999994 44578999999999999999998 78898755443332222211000                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           ......+..+.+++.+||..||.+||++.++++
T Consensus       234 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~  266 (272)
T cd05075         234 -----KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC  266 (272)
T ss_pred             -----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                 001235677899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.63  E-value=3e-15  Score=101.11  Aligned_cols=89  Identities=22%  Similarity=0.334  Sum_probs=63.3

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChh-HHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKD-HLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +..|+|||.+.+ ..++.++|+||+|+++|+|++ |..||...... ........ +....                   
T Consensus       206 ~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~-------------------  264 (302)
T cd05055         206 PVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE-GYRMA-------------------  264 (302)
T ss_pred             ccccCCHhhhcc-CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHc-CCcCC-------------------
Confidence            456999998554 478899999999999999998 88998655321 12111110 00000                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             .....+.++.+|+.+||..+|++||++.++++
T Consensus       265 -------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         265 -------QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             -------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                   01225678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.63  E-value=1.3e-15  Score=101.13  Aligned_cols=89  Identities=21%  Similarity=0.270  Sum_probs=64.6

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+ ....++.++|+||+||+++||++ |..||................   ..                   
T Consensus       178 ~~~~~~pe~~-~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~---~~-------------------  234 (273)
T cd05035         178 PVKWIAIESL-ADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN---RL-------------------  234 (273)
T ss_pred             CccccCHhhc-ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CC-------------------
Confidence            4579999984 45578899999999999999998 888886554333222111100   00                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           ......+.++.+++.+||..||++||++.++++
T Consensus       235 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~  267 (273)
T cd05035         235 -----KQPEDCLDELYDLMYSCWRADPKDRPTFTKLRE  267 (273)
T ss_pred             -----CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                 001236778999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.63  E-value=2.4e-15  Score=100.38  Aligned_cols=89  Identities=12%  Similarity=0.147  Sum_probs=65.9

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+||++|||++ |..||...........+......+.                    
T Consensus       174 ~~~y~~PE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  232 (279)
T cd05109         174 PIKWMALESIL-HRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQ--------------------  232 (279)
T ss_pred             chhhCCHHHhc-cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC--------------------
Confidence            45799999954 4478899999999999999987 8899876544444333332111110                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....+.++.+++.+||..||++||++.+++.
T Consensus       233 -------~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         233 -------PPICTIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             -------CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                   0225678899999999999999999999883

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.63  E-value=3.2e-15  Score=98.50  Aligned_cols=91  Identities=20%  Similarity=0.268  Sum_probs=65.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|++||.+ ....++.++|+||+|+++++|++ |..||...........+.....  ...                 
T Consensus       162 ~~~~y~~pE~~-~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~-----------------  221 (257)
T cd05040         162 VPFAWCAPESL-RTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGE--RLE-----------------  221 (257)
T ss_pred             CCceecCHHHh-cccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC--cCC-----------------
Confidence            45679999984 44478899999999999999998 9999965544333222221000  000                 


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             .....+..+.+++.+||..+|++||+++++++
T Consensus       222 -------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         222 -------RPEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             -------CCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence                   00125678899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.63  E-value=2.3e-15  Score=100.62  Aligned_cols=89  Identities=17%  Similarity=0.254  Sum_probs=65.2

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+.+ ..++.++|+||+|+++++|++ |..||.+.....+...+......+                     
T Consensus       189 ~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------  246 (283)
T cd05090         189 PIRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLP---------------------  246 (283)
T ss_pred             cceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC---------------------
Confidence            446999999544 478899999999999999998 888886554433333322111000                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            ....++.++.+++.+||+.||.+||++.++++
T Consensus       247 ------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  278 (283)
T cd05090         247 ------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHT  278 (283)
T ss_pred             ------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence                  11236778899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.63  E-value=1.8e-15  Score=100.68  Aligned_cols=90  Identities=21%  Similarity=0.287  Sum_probs=65.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||.+. ...++.++|+||+|++++++++ |..||................. ..                   
T Consensus       183 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~-------------------  241 (277)
T cd05032         183 LPVRWMAPESLK-DGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGH-LD-------------------  241 (277)
T ss_pred             ccccccCHHHHh-cCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCC-CC-------------------
Confidence            356799999954 4478899999999999999998 8899976544443332221110 00                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             .....+.++.+++.+||+.+|++|||+.+++.
T Consensus       242 -------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         242 -------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             -------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                   01225678899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.63  E-value=1.7e-15  Score=99.80  Aligned_cols=89  Identities=21%  Similarity=0.229  Sum_probs=63.7

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+. ...++.++|+||+|+++|+|++ |..||..................   .                  
T Consensus       164 ~~~~~aPe~~~-~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~------------------  221 (256)
T cd05112         164 PVKWSSPEVFS-FSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRL---Y------------------  221 (256)
T ss_pred             chhhcCHhHhc-cCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCC---C------------------
Confidence            35699999854 4578899999999999999998 88999755433222111100000   0                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            .....+.++.+|+.+||..+|++||++.++++
T Consensus       222 ------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~  253 (256)
T cd05112         222 ------KPRLASQSVYELMQHCWKERPEDRPSFSLLLH  253 (256)
T ss_pred             ------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence                  00125678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.63  E-value=2.8e-15  Score=99.09  Aligned_cols=89  Identities=16%  Similarity=0.135  Sum_probs=65.4

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+. ...++.++|+||+|+++|++++ |..||...........+.......                     
T Consensus       161 ~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------  218 (257)
T cd05115         161 PLKWYAPECIN-FRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLD---------------------  218 (257)
T ss_pred             CcccCCHHHHc-cCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC---------------------
Confidence            45799999854 4478889999999999999996 999997664433333332211100                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            .....+.++.+++.+|+..+|++||++.++.+
T Consensus       219 ------~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         219 ------CPAECPPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             ------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                  01236788999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.62  E-value=1.9e-15  Score=99.71  Aligned_cols=88  Identities=17%  Similarity=0.170  Sum_probs=63.7

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|+|||.+. ...++.++|+||+|+++|+|++ |..||...........+.....  .                     
T Consensus       165 ~~y~~Pe~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~--~---------------------  220 (256)
T cd05059         165 VKWAPPEVFD-YSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR--L---------------------  220 (256)
T ss_pred             ccccCHHHhc-cCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc--C---------------------
Confidence            4699999954 4478899999999999999998 7888865533222221111000  0                     


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                          ......+.++.+++.+||..+|++||++.++++
T Consensus       221 ----~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~  253 (256)
T cd05059         221 ----YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLS  253 (256)
T ss_pred             ----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                001236778999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.62  E-value=2.1e-15  Score=99.70  Aligned_cols=88  Identities=18%  Similarity=0.246  Sum_probs=63.6

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+|++++++++ |..||.+............... . .                   
T Consensus       166 ~~~y~~pe~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~-~-------------------  223 (260)
T cd05067         166 PIKWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR-M-P-------------------  223 (260)
T ss_pred             cccccCHHHhc-cCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC-C-C-------------------
Confidence            45699999854 4478889999999999999998 9999975543332222111000 0 0                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                            .....+.++.+++.+||..+|++||++++++
T Consensus       224 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~  254 (260)
T cd05067         224 ------RPDNCPEELYELMRLCWKEKPEERPTFEYLR  254 (260)
T ss_pred             ------CCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence                  0123567899999999999999999999886

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.62  E-value=2.2e-15  Score=99.50  Aligned_cols=89  Identities=16%  Similarity=0.250  Sum_probs=64.0

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+|+++++|++ |..||...........+......  .                   
T Consensus       167 ~~~~~~PE~~~-~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--~-------------------  224 (261)
T cd05148         167 PYKWTAPEAAS-HGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM--P-------------------  224 (261)
T ss_pred             ceEecCHHHHc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC--C-------------------
Confidence            45699999954 4478889999999999999998 88999765433222211110000  0                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            .....+.++.+++.+||..||.+|||++++++
T Consensus       225 ------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         225 ------CPAKCPQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             ------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                  01236778999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.62  E-value=2.9e-15  Score=99.35  Aligned_cols=89  Identities=22%  Similarity=0.350  Sum_probs=64.0

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+.+ ..++.++|+||+|+++|+|++ |..||...........+......                      
T Consensus       176 ~~~y~aPE~~~~-~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~----------------------  232 (269)
T cd05044         176 PVRWMAPESLLD-GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRL----------------------  232 (269)
T ss_pred             CccccCHHHHcc-CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCcc----------------------
Confidence            467999999654 478999999999999999997 89998655333222221110000                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           ......+..+.+|+.+||..+|.+||+++++++
T Consensus       233 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         233 -----QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             -----CCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                 001235678899999999999999999999863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.62  E-value=3.2e-15  Score=98.81  Aligned_cols=89  Identities=17%  Similarity=0.225  Sum_probs=62.0

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhC-CCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSG-KPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+. ...++.++|+||+|+++++|++| .+||................. ...                   
T Consensus       165 ~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------------------  223 (262)
T cd05058         165 PVKWMALESLQ-TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRR-LLQ-------------------  223 (262)
T ss_pred             CccccChhHhc-cCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC-CCC-------------------
Confidence            45699999854 44788999999999999999995 566654433322222111000 000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....+..+.+++.+||..+|++||++.++++
T Consensus       224 -------~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~  254 (262)
T cd05058         224 -------PEYCPDPLYEVMLSCWHPKPEMRPTFSELVS  254 (262)
T ss_pred             -------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                   0125678899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.62  E-value=3.4e-15  Score=98.62  Aligned_cols=87  Identities=23%  Similarity=0.368  Sum_probs=63.3

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhH-HHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDH-LSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +..|++||.+. ...++.++|+||+|++++++++ |+.||.+..... ...+......+.                    
T Consensus       167 ~~~y~~PE~~~-~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  225 (261)
T cd05034         167 PIKWTAPEAAN-YGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPR--------------------  225 (261)
T ss_pred             CccccCHHHhc-cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC--------------------
Confidence            45799999955 4478899999999999999998 899997553322 222211100000                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                              ....+.++.+++.+||..+|.+||+++++.
T Consensus       226 --------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~  255 (261)
T cd05034         226 --------PPNCPEELYDLMLQCWDKDPEERPTFEYLQ  255 (261)
T ss_pred             --------CCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence                    012467889999999999999999999886

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.62  E-value=2.3e-15  Score=104.56  Aligned_cols=89  Identities=20%  Similarity=0.268  Sum_probs=63.1

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +..|+|||++.+ ..++.++|+||+|+++|+|++ |..||.... .......+.......                    
T Consensus       279 ~~~y~aPE~~~~-~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  337 (375)
T cd05104         279 PVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRML--------------------  337 (375)
T ss_pred             CcceeChhHhcC-CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCC--------------------
Confidence            356999999654 478999999999999999997 788886542 222222211100000                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             .....+.++.+|+.+||+.||++||++.++++
T Consensus       338 -------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~  369 (375)
T cd05104         338 -------SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQ  369 (375)
T ss_pred             -------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence                   01124678899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.62  E-value=1.4e-15  Score=102.05  Aligned_cols=90  Identities=21%  Similarity=0.283  Sum_probs=65.0

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+. ...++.++|+||+||++|+|++ |..||..................                      
T Consensus       197 ~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------  253 (293)
T cd05053         197 PVKWMAPEALF-DRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRM----------------------  253 (293)
T ss_pred             CccccCHHHhc-cCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcC----------------------
Confidence            35699999854 4478899999999999999997 88888755443333222110000                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                           ......+.++.+|+.+|+..||++|||+++++++
T Consensus       254 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         254 -----EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             -----CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence                 0012356788999999999999999999998853

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.62  E-value=2.4e-15  Score=102.14  Aligned_cols=90  Identities=17%  Similarity=0.211  Sum_probs=66.4

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |..|++||.+. ...++.++|+||+|+++|+|++ |..||.+.....+..+.......+.                    
T Consensus       174 ~~~y~apE~~~-~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  232 (316)
T cd05108         174 PIKWMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ--------------------  232 (316)
T ss_pred             ceeecChHHhc-cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCC--------------------
Confidence            45699999954 4478999999999999999987 8999976554444433321111100                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                             ....+.+..+++.+|+..+|.+||++.+++.+
T Consensus       233 -------~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         233 -------PPICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             -------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                   01256678999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.61  E-value=5.2e-15  Score=99.28  Aligned_cols=88  Identities=24%  Similarity=0.326  Sum_probs=65.1

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+|+++++|++ |..||.+.....+..........                      
T Consensus       192 ~~~y~apE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------  248 (290)
T cd05045         192 PVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRM----------------------  248 (290)
T ss_pred             CccccCHHHHc-cCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC----------------------
Confidence            45799999854 4478899999999999999998 88999765444433322210000                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                           ......+.++.+++.+||..+|++||++++++
T Consensus       249 -----~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~  280 (290)
T cd05045         249 -----ERPENCSEEMYNLMLTCWKQEPDKRPTFADIS  280 (290)
T ss_pred             -----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHH
Confidence                 00123677899999999999999999999986

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.61  E-value=4.3e-15  Score=97.98  Aligned_cols=89  Identities=21%  Similarity=0.265  Sum_probs=64.7

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+. ...++.++|+||+||++|+|++ |+.||...........+....  ..                    
T Consensus       162 ~~~y~aPE~~~-~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~--------------------  218 (256)
T cd05082         162 PVKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY--KM--------------------  218 (256)
T ss_pred             ceeecCHHHHc-cCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC--CC--------------------
Confidence            45699999854 4578899999999999999997 889986554433322221100  00                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           ......+..+.+++.+|+..+|++||+++++++
T Consensus       219 -----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         219 -----DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             -----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                 011236778999999999999999999999863

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.61  E-value=4.1e-15  Score=97.78  Aligned_cols=88  Identities=17%  Similarity=0.178  Sum_probs=62.8

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|+|||.+. ...++.++|+||+|+++|+|++ |..||...........+......  .                    
T Consensus       160 ~~y~aPE~~~-~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~--~--------------------  216 (252)
T cd05084         160 VKWTAPEALN-YGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRL--P--------------------  216 (252)
T ss_pred             eeecCchhhc-CCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCC--C--------------------
Confidence            3599999854 4478899999999999999997 88888654333322222211000  0                    


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           .....+..+.+|+.+||..+|++||++.++++
T Consensus       217 -----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         217 -----CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             -----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                 01225678899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.61  E-value=2.9e-15  Score=99.30  Aligned_cols=89  Identities=17%  Similarity=0.184  Sum_probs=64.2

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+|+++++|++ |..||...........+......+.                    
T Consensus       171 ~~~y~~Pe~~~-~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  229 (266)
T cd05033         171 PIRWTAPEAIA-YRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPP--------------------  229 (266)
T ss_pred             CccccChhhhc-cCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCC--------------------
Confidence            45699999854 4578899999999999999987 8888865533332222211100000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....+..+.+++.+|+..+|++||++.++++
T Consensus       230 -------~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~  260 (266)
T cd05033         230 -------PMDCPSALYQLMLDCWQKDRNERPTFSQIVS  260 (266)
T ss_pred             -------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                   1236778899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.61  E-value=4.6e-15  Score=97.47  Aligned_cols=88  Identities=19%  Similarity=0.258  Sum_probs=63.8

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|+|||.+.+ ..++.++|+||+|+++++|++ |..||...........+......+                      
T Consensus       159 ~~y~~PE~~~~-~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~----------------------  215 (251)
T cd05041         159 IKWTAPEALNY-GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMP----------------------  215 (251)
T ss_pred             eccCChHhhcc-CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCC----------------------
Confidence            45999999544 478899999999999999998 788886554333332222110000                      


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           .....+.++.+++.+||..+|.+||++.++++
T Consensus       216 -----~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         216 -----APQLCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             -----CCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence                 01235678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.61  E-value=1.5e-15  Score=105.62  Aligned_cols=86  Identities=21%  Similarity=0.337  Sum_probs=65.5

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhC-CCCCCCCCCccchHHHhhcCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFG-NPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ..|.|||.+. ...++.++||||||++|+||++ |+.|+........-..++... .+.+                    
T Consensus       368 IkWtAPEa~~-~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P--------------------  426 (468)
T KOG0197|consen  368 IKWTAPEALN-YGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRP--------------------  426 (468)
T ss_pred             ceecCHHHHh-hCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCC--------------------
Confidence            4699999955 4489999999999999999986 788887664444333333222 2222                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                              ..+++++.+++..|+..+|++|||++.+.
T Consensus       427 --------~~CP~~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  427 --------EGCPDEVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             --------CCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence                    34899999999999999999999998654

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.60  E-value=6.7e-15  Score=98.64  Aligned_cols=89  Identities=20%  Similarity=0.186  Sum_probs=63.1

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+. ...++.++|+||+||++|+|++ |..||.+.........+......                      
T Consensus       195 ~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~----------------------  251 (288)
T cd05050         195 PIRWMPPESIF-YNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVL----------------------  251 (288)
T ss_pred             ChhhcCHHHHh-cCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC----------------------
Confidence            34599999854 4478999999999999999997 77788655333322222110000                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           ......+.++.+|+.+||+.+|.+||+++++++
T Consensus       252 -----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         252 -----SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             -----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                 001235678999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.60  E-value=4.3e-15  Score=98.20  Aligned_cols=87  Identities=21%  Similarity=0.301  Sum_probs=63.2

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|+|||... ...++.++|+||+|+++++|++ |+.||.+.........+......  .                    
T Consensus       168 ~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~--~--------------------  224 (261)
T cd05068         168 IKWTAPEAAL-YNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRM--P--------------------  224 (261)
T ss_pred             eeccCccccc-cCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC--C--------------------
Confidence            3699999854 4578899999999999999998 89999765433322222110000  0                    


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                           .....+..+.+++.+|+..+|++||++.+++
T Consensus       225 -----~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~  255 (261)
T cd05068         225 -----CPPGCPKELYDIMLDCWKEDPDDRPTFETLQ  255 (261)
T ss_pred             -----CCCcCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence                 0122567889999999999999999999886

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.60  E-value=6.3e-15  Score=100.02  Aligned_cols=88  Identities=22%  Similarity=0.307  Sum_probs=64.4

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|++||.+. ...++.++|+||+|+++|+|++ |..||.................  .                     
T Consensus       200 ~~y~aPE~~~-~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~---------------------  255 (314)
T cd05099         200 VKWMAPEALF-DRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR--M---------------------  255 (314)
T ss_pred             ccccCHHHHc-cCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--C---------------------
Confidence            4699999955 4478899999999999999998 7888865544433332221000  0                     


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                          ......+.++.+++.+||..+|++||++.++++
T Consensus       256 ----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         256 ----DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             ----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                001235678899999999999999999998873

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.60  E-value=3.6e-15  Score=99.14  Aligned_cols=89  Identities=26%  Similarity=0.241  Sum_probs=63.2

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+. ...++.++|+||+|+++++|++ |..||...........+..     ....                 
T Consensus       174 ~~~y~apE~~~-~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-----~~~~-----------------  230 (270)
T cd05047         174 PVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-----GYRL-----------------  230 (270)
T ss_pred             ccccCChHHHc-cCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhC-----CCCC-----------------
Confidence            34699999854 4578899999999999999996 8999965433222111110     0000                 


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           ......+.++.+++.+|+..+|.+||++.++++
T Consensus       231 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         231 -----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             -----CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence                 001235678899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.60  E-value=5.9e-15  Score=99.82  Aligned_cols=88  Identities=18%  Similarity=0.289  Sum_probs=64.4

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|+|||.+.+ ..++.++|+||+|+++|+|++ |..||.................  .                     
T Consensus       206 ~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~---------------------  261 (307)
T cd05098         206 VKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR--M---------------------  261 (307)
T ss_pred             cceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCC--C---------------------
Confidence            56999998554 478899999999999999998 7888865544333332221100  0                     


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                          ......+.++.+|+.+||..+|++||++.++++
T Consensus       262 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~  294 (307)
T cd05098         262 ----DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  294 (307)
T ss_pred             ----CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence                011236778999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.60  E-value=7.3e-15  Score=97.20  Aligned_cols=93  Identities=22%  Similarity=0.307  Sum_probs=64.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|+|||.+. ...++.++|+||+|+++++|++|+.||......... ...........                   
T Consensus       168 ~~~~y~apE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~-------------------  226 (267)
T cd08224         168 GTPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS-LCKKIEKCDYP-------------------  226 (267)
T ss_pred             CCccccCHHHhc-cCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHH-HHhhhhcCCCC-------------------
Confidence            566799999954 447889999999999999999999998644322111 11111000000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                      ..+    ....+.+..+++.+||..+|++||++.++++
T Consensus       227 ~~~----~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         227 PLP----ADHYSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             CCC----hhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            000    0136678899999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.60  E-value=5.8e-15  Score=97.91  Aligned_cols=88  Identities=17%  Similarity=0.178  Sum_probs=63.5

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|++||.+.+ ..++.++|+||+|+++|+|++ |..||...........+......+ .                    
T Consensus       174 ~~y~~PE~~~~-~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~-~--------------------  231 (268)
T cd05063         174 IRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLP-A--------------------  231 (268)
T ss_pred             ceecCHHHhhc-CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCC-C--------------------
Confidence            35999998544 478899999999999999987 999996554333322222111000 0                    


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            ....+.++.+++.+|+..+|++||++.++++
T Consensus       232 ------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         232 ------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             ------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                  1125678899999999999999999999873

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.60  E-value=3.2e-15  Score=104.39  Aligned_cols=96  Identities=20%  Similarity=0.231  Sum_probs=76.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHH-HHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIV-RLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|.|||+++.. ..+.++|+|++|+++|||++|.+||.+.+.-..+.++ +-++                       
T Consensus       581 GTpEYVAPEIILnK-GHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid-----------------------  636 (732)
T KOG0614|consen  581 GTPEYVAPEIILNK-GHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGID-----------------------  636 (732)
T ss_pred             CCcccccchhhhcc-CcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhh-----------------------
Confidence            89999999997755 8899999999999999999999999877554443332 2111                       


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEK  125 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~  125 (142)
                          .....+.++..+.+|++++=..+|.+|+.     +++|.+|.||..
T Consensus       637 ----~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  637 ----KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             ----hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence                11222447788899999999999999986     889999999984

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.60  E-value=1e-15  Score=111.48  Aligned_cols=89  Identities=20%  Similarity=0.285  Sum_probs=66.0

Q ss_pred             CccCcccchhhh--cCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            1 EVEFPYKAPESR--ICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         1 ~~t~~y~~PE~~--~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      +-|+.||+||++  ..+...+.++|||++||+||.|.+...||+....-.+  +-..+..|+.                 
T Consensus       216 ~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI--lng~Y~~P~~-----------------  276 (738)
T KOG1989|consen  216 YTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI--LNGNYSFPPF-----------------  276 (738)
T ss_pred             hCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE--EeccccCCCC-----------------
Confidence            358999999984  3456789999999999999999999999975422111  0001111111                 


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                                 +..+..+++||+.||+.||.+||++.|++.
T Consensus       277 -----------p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~  306 (738)
T KOG1989|consen  277 -----------PNYSDRLKDLIRTMLQPNPDERPNIYQVLE  306 (738)
T ss_pred             -----------ccHHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence                       226789999999999999999999998774

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.60  E-value=1.1e-14  Score=95.63  Aligned_cols=89  Identities=17%  Similarity=0.194  Sum_probs=64.2

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+. ...++.++|+||+|++++++++ |..||...........+.....  .                    
T Consensus       157 ~~~y~aPE~~~-~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~--------------------  213 (250)
T cd05085         157 PIKWTAPEALN-YGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYR--M--------------------  213 (250)
T ss_pred             cccccCHHHhc-cCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCC--C--------------------
Confidence            34599999954 4478889999999999999998 8889975543332222211000  0                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           ......+..+.+++.+|+..+|++||++.++++
T Consensus       214 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         214 -----SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             -----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                 001235678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.59  E-value=2e-16  Score=114.99  Aligned_cols=100  Identities=23%  Similarity=0.267  Sum_probs=69.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhC-CCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSG-KPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||-.|+|||++... .-+.++||+|+||++|+.++| ..||...-..+ ..|..  +.                     .
T Consensus       676 Gt~GW~APE~L~~~-~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-~NIl~--~~---------------------~  730 (903)
T KOG1027|consen  676 GTSGWQAPEQLRED-RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-ANILT--GN---------------------Y  730 (903)
T ss_pred             CcccccCHHHHhcc-ccCcccchhhcCceEEEEecCCccCCCchHHhh-hhhhc--Cc---------------------c
Confidence            78899999996544 556799999999999988776 78995431111 11111  00                     0


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ....+.   .....++.+||.+|+.++|..||+|.+++.||+|+....+
T Consensus       731 ~L~~L~---~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ekr  776 (903)
T KOG1027|consen  731 TLVHLE---PLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDSEKR  776 (903)
T ss_pred             ceeeec---cCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCChHHH
Confidence            000000   0111288999999999999999999999999999987443

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.59  E-value=1.1e-14  Score=95.82  Aligned_cols=90  Identities=21%  Similarity=0.338  Sum_probs=65.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ++..|++||.+ ....++.++|+||+|+++++|++ |..||..................                     
T Consensus       166 ~~~~y~~Pe~~-~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------  223 (258)
T smart00219      166 LPIRWMAPESL-KDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRL---------------------  223 (258)
T ss_pred             CcccccChHHh-ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC---------------------
Confidence            45789999985 45578899999999999999998 77888655433332222111100                     


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            ......+.++.+++.+||..+|++|||+.++++
T Consensus       224 ------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      224 ------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             ------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence                  001226778999999999999999999999874

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.59  E-value=3e-15  Score=101.12  Aligned_cols=90  Identities=26%  Similarity=0.236  Sum_probs=64.0

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||.+ ....++.++|+||+|+++++|++ |..||.............  .....                    
T Consensus       186 ~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~--~~~~~--------------------  242 (303)
T cd05088         186 PVRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP--QGYRL--------------------  242 (303)
T ss_pred             cccccCHHHH-hccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHh--cCCcC--------------------
Confidence            3469999985 44478899999999999999998 999996553332221111  00000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                           ......+.++.+|+.+||..+|++||++++++++
T Consensus       243 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         243 -----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             -----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 0012256788999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.59  E-value=1.1e-14  Score=98.33  Aligned_cols=89  Identities=20%  Similarity=0.290  Sum_probs=64.7

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||++.+ ..++.++|+||+|+++|+|++ |..||...........+.....   .                   
T Consensus       202 ~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~-------------------  258 (304)
T cd05101         202 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR---M-------------------  258 (304)
T ss_pred             CceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc---C-------------------
Confidence            456999999544 478899999999999999998 7788865544433332221000   0                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           ......+.++.+|+.+||..+|++||++.++++
T Consensus       259 -----~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~  291 (304)
T cd05101         259 -----DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE  291 (304)
T ss_pred             -----CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence                 001236778999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.58  E-value=2.3e-15  Score=99.64  Aligned_cols=89  Identities=20%  Similarity=0.250  Sum_probs=61.8

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ...|+|||.+... .++.++||||||++++|+++ |+.||.......+...+.......                     
T Consensus       168 ~~~~~aPE~~~~~-~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~---------------------  225 (259)
T PF07714_consen  168 PLRYLAPEVLKDG-EYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP---------------------  225 (259)
T ss_dssp             GGGGS-HHHHHHS-EESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT---------------------
T ss_pred             ccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccce---------------------
Confidence            4579999995444 68999999999999999999 678887664444333222111111                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            ....++..+.+++..||..+|++||++.++++
T Consensus       226 ------~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  226 ------IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             ------SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             ------eccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                  01236788999999999999999999999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.58  E-value=8.6e-15  Score=97.22  Aligned_cols=88  Identities=19%  Similarity=0.250  Sum_probs=63.3

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|+|||.+ ....++.++|+||+|++++++++ |..||...........+......                       
T Consensus       172 ~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-----------------------  227 (270)
T cd05056         172 IKWMAPESI-NFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL-----------------------  227 (270)
T ss_pred             ccccChhhh-ccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC-----------------------
Confidence            469999984 44578899999999999999885 99999765332222111110000                       


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                          ......+.++.+++.+|+..+|.+||++.+++.
T Consensus       228 ----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~  260 (270)
T cd05056         228 ----PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA  260 (270)
T ss_pred             ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                001236778999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.58  E-value=7.3e-15  Score=97.11  Aligned_cols=88  Identities=16%  Similarity=0.252  Sum_probs=63.6

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+|++++++++ |..||...........+..  ....                    
T Consensus       166 ~~~y~~PE~~~-~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~--~~~~--------------------  222 (260)
T cd05073         166 PIKWTAPEAIN-FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER--GYRM--------------------  222 (260)
T ss_pred             cccccCHhHhc-cCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhC--CCCC--------------------
Confidence            35699999954 4478889999999999999998 8899976543332222111  0000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                           ......+.++.+++.+|+..+|++||++.+++
T Consensus       223 -----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~  254 (260)
T cd05073         223 -----PRPENCPEELYNIMMRCWKNRPEERPTFEYIQ  254 (260)
T ss_pred             -----CCcccCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence                 01123677899999999999999999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.58  E-value=1.2e-14  Score=99.42  Aligned_cols=90  Identities=19%  Similarity=0.277  Sum_probs=65.2

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|+|||++. ...++.++|+||+|+++|+|++ |..||...........+.....  .                    
T Consensus       199 ~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~--------------------  255 (334)
T cd05100         199 PVKWMAPEALF-DRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHR--M--------------------  255 (334)
T ss_pred             CceEcCHHHhc-cCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--C--------------------
Confidence            35699999955 4478899999999999999998 7888865544333322221000  0                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                           ......+.++.+++.+||..+|++||++.+++++
T Consensus       256 -----~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         256 -----DKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             -----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence                 0012356788999999999999999999998853

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.58  E-value=1.8e-14  Score=97.36  Aligned_cols=89  Identities=12%  Similarity=0.131  Sum_probs=65.0

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+|+++|+|++ |..||.+................+.                    
T Consensus       174 ~~~y~~PE~~~-~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  232 (303)
T cd05110         174 PIKWMALECIH-YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQ--------------------  232 (303)
T ss_pred             ccccCCHHHhc-cCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCC--------------------
Confidence            56799999954 4578999999999999999987 8888865544444333321111100                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....+..+.+++.+|+..+|++||+++++++
T Consensus       233 -------~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~  263 (303)
T cd05110         233 -------PPICTIDVYMVMVKCWMIDADSRPKFKELAA  263 (303)
T ss_pred             -------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                   0124567899999999999999999999775

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.58  E-value=1.3e-14  Score=98.02  Aligned_cols=94  Identities=17%  Similarity=0.183  Sum_probs=62.2

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh--CCCCcCCCChhHHHH-HHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS--GKPLFPCGKKDHLSL-IVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~--g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      |..|+|||++.+ ..++.++|+||+|+++|+|++  +..||.......... ............                
T Consensus       203 ~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----------------  265 (304)
T cd05096         203 PIRWMAWECILM-GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQV----------------  265 (304)
T ss_pred             CccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccc----------------
Confidence            567999999654 478999999999999999986  456776543322211 111100000000                


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                           .......++..+.+|+.+|+..||++||+++++.
T Consensus       266 -----~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         266 -----YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             -----cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence                 0001123667899999999999999999999985

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.57  E-value=1.5e-14  Score=97.22  Aligned_cols=95  Identities=17%  Similarity=0.178  Sum_probs=63.2

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh--CCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS--GKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~--g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      |..|+|||.+.+ ..++.++|+||+|+++|+|++  +..||..... ..+...........                   
T Consensus       195 ~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-------------------  254 (296)
T cd05051         195 PIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDG-------------------  254 (296)
T ss_pred             CceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhcccccc-------------------
Confidence            557999999554 478899999999999999987  5677754422 22222221100000                   


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                        ...........+.++.+++.+||..||.+||++.++++
T Consensus       255 --~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         255 --RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             --ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence              00000011235678999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.57  E-value=4.6e-15  Score=111.10  Aligned_cols=95  Identities=20%  Similarity=0.269  Sum_probs=72.3

Q ss_pred             ccCcccchhhhcC---C-CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHH-H---HhCCCCCCCCCCccchHHH
Q 048170            2 VEFPYKAPESRIC---S-SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIV-R---LFGNPTKETWPGANYISEL   73 (142)
Q Consensus         2 ~t~~y~~PE~~~~---~-~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~   73 (142)
                      |||-|.+||++..   + ..|+..+|.||+|+++|||+.|..||........+..| .   .++.|.             
T Consensus       238 GTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~-------------  304 (1317)
T KOG0612|consen  238 GTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPD-------------  304 (1317)
T ss_pred             CCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCc-------------
Confidence            8999999999642   2 46899999999999999999999999755333332221 1   111110             


Q ss_pred             hhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCC---HHHHhcCCCccc
Q 048170           74 LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT---ANDALCIGTSEK  125 (142)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t---~~~~l~~~~~~~  125 (142)
                                     ...++.++++||.++++ +|..|++   ++++.+||||.+
T Consensus       305 ---------------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g  343 (1317)
T KOG0612|consen  305 ---------------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEG  343 (1317)
T ss_pred             ---------------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccC
Confidence                           02289999999999988 5899998   999999999985

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.56  E-value=3e-14  Score=93.90  Aligned_cols=89  Identities=24%  Similarity=0.304  Sum_probs=64.2

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+|++++++++ |..||.................  .                    
T Consensus       162 ~~~~~ape~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~--~--------------------  218 (256)
T cd05039         162 PVKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR--M--------------------  218 (256)
T ss_pred             cccccCchhhc-CCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC--C--------------------
Confidence            34699999854 4478889999999999999997 8888865544333222211000  0                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           ......+.++.+++.+||..+|++||+++++++
T Consensus       219 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         219 -----EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             -----CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence                 001236788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.56  E-value=6.9e-15  Score=107.22  Aligned_cols=87  Identities=20%  Similarity=0.278  Sum_probs=66.4

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..||+||.++-+ .|+..+||||+|++|||+++ |+.|+.+-..+..-..+....                         
T Consensus       669 IRWMppEsIly~-kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~-------------------------  722 (774)
T KOG1026|consen  669 IRWMPPESILYG-KFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQ-------------------------  722 (774)
T ss_pred             eecCCHHHhhcC-cccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCC-------------------------
Confidence            569999997655 99999999999999999984 778887664433323332111                         


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                        ..+....++.++.+|+..|++..|++||++++|-
T Consensus       723 --lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  723 --LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             --cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence              1222345899999999999999999999999864

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.56  E-value=2.5e-14  Score=95.43  Aligned_cols=88  Identities=16%  Similarity=0.200  Sum_probs=65.2

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+|++++++++ |..||.......+...+......+.                    
T Consensus       174 ~~~y~~PE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  232 (279)
T cd05057         174 PIKWMALESIL-HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQ--------------------  232 (279)
T ss_pred             cccccCHHHhh-cCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCC--------------------
Confidence            45699999854 4478899999999999999998 9999976655444433332111000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                             ....+.++.+++.+|+..+|++||++.+++
T Consensus       233 -------~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~  262 (279)
T cd05057         233 -------PPICTIDVYMVLVKCWMIDAESRPTFKELI  262 (279)
T ss_pred             -------CCCCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence                   012556788999999999999999999886

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.56  E-value=1.5e-14  Score=101.33  Aligned_cols=90  Identities=19%  Similarity=0.241  Sum_probs=63.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ++..|+|||.+.+ ..++.++||||+|+++|+|++ |..||..... ......+..... .                   
T Consensus       301 ~~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~-~-------------------  359 (400)
T cd05105         301 LPVKWMAPESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYR-M-------------------  359 (400)
T ss_pred             CCcceEChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCC-C-------------------
Confidence            3467999999654 478899999999999999996 8888865422 121111111000 0                   


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             .....++.++.+++.+||..+|++||++.++.+
T Consensus       360 -------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         360 -------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             -------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence                   001236778899999999999999999988763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.55  E-value=1.9e-14  Score=95.45  Aligned_cols=89  Identities=15%  Similarity=0.172  Sum_probs=63.3

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+|++++++++ |..||...........+......+                     
T Consensus       172 ~~~y~~pe~~~-~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------  229 (267)
T cd05066         172 PIRWTAPEAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLP---------------------  229 (267)
T ss_pred             ceeecCHhHhc-cCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCC---------------------
Confidence            34699999954 4478999999999999999886 999987554332222111100000                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            .....+..+.+++.+|++.+|.+||++.++++
T Consensus       230 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         230 ------APMDCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             ------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence                  01235678899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.55  E-value=2.2e-14  Score=98.54  Aligned_cols=90  Identities=20%  Similarity=0.284  Sum_probs=63.0

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +..|++||.+.+ ..++.++|+||+|+++++|++ |..||..... ..............                    
T Consensus       244 ~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  302 (343)
T cd05103         244 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR--------------------  302 (343)
T ss_pred             CcceECcHHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCC--------------------
Confidence            456999999654 478899999999999999996 8888865422 11111111000000                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                             .....+.++.+++.+||..+|++||++.++++|
T Consensus       303 -------~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         303 -------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             -------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                   001245678999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.55  E-value=3.2e-14  Score=93.71  Aligned_cols=89  Identities=19%  Similarity=0.259  Sum_probs=64.6

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+|+++++|++ |..||...........+.....+                      
T Consensus       160 ~~~y~~pe~~~-~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------  216 (254)
T cd05083         160 PVKWTAPEALK-HKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRM----------------------  216 (254)
T ss_pred             CceecCHHHhc-cCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCC----------------------
Confidence            34699999854 4478899999999999999997 88999766443332222210000                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           ......+.++.+++.+||..+|++||++++++.
T Consensus       217 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         217 -----EPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             -----CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                 001236778899999999999999999999873

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.55  E-value=1.6e-14  Score=95.90  Aligned_cols=88  Identities=15%  Similarity=0.170  Sum_probs=63.4

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|++||.+. ...++.++|+||+|++++|+++ |..||...........+......+                      
T Consensus       175 ~~y~~PE~~~-~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~----------------------  231 (269)
T cd05065         175 IRWTAPEAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLP----------------------  231 (269)
T ss_pred             eeecCHhHhc-cCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCC----------------------
Confidence            4699999954 4578899999999999999885 889986554433322221100000                      


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           ....++.++.+++.+||..+|.+||++++++.
T Consensus       232 -----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         232 -----PPMDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             -----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                 01235678899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.55  E-value=2e-15  Score=106.71  Aligned_cols=100  Identities=21%  Similarity=0.219  Sum_probs=77.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |++.|.|||++.+....++.+|+||+|+++|.|..|..||++.....+....-...                        
T Consensus       216 gsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk------------------------  271 (596)
T KOG0586|consen  216 GSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGK------------------------  271 (596)
T ss_pred             CCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeee------------------------
Confidence            68899999998888778899999999999999999999998663322211110000                        


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                          ....-.++.++.++|+++|.++|.+|+++++++.|.|.......
T Consensus       272 ----~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  272 ----YRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             ----ecccceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence                01112278899999999999999999999999999998865444

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.55  E-value=3.1e-14  Score=94.74  Aligned_cols=90  Identities=17%  Similarity=0.254  Sum_probs=62.8

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+.+ ...+.++|+||+|+++++|++ |..||................. .   +                 
T Consensus       181 ~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~-~---~-----------------  238 (275)
T cd05046         181 PLRWLAPEAVQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKL-E---L-----------------  238 (275)
T ss_pred             EEeecChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCc-C---C-----------------
Confidence            455999998543 467889999999999999998 7788864433222221110000 0   0                 


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           .....++..+.+++.+||..+|.+||++.+++.
T Consensus       239 -----~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~  271 (275)
T cd05046         239 -----PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVS  271 (275)
T ss_pred             -----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                 001236778999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.55  E-value=3e-14  Score=94.65  Aligned_cols=89  Identities=20%  Similarity=0.223  Sum_probs=63.8

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +..|++||.+. ...++.++|+||+||++|+|++ |..||...........+.......                     
T Consensus       178 ~~~~~~pe~~~-~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------  235 (273)
T cd05074         178 PVKWLALESLA-DNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLK---------------------  235 (273)
T ss_pred             chhhcCHhHHh-cCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCC---------------------
Confidence            35689999844 4478889999999999999998 888886554433322221111000                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            .....+..+.+++.+||..+|++||++.++++
T Consensus       236 ------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~  267 (273)
T cd05074         236 ------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD  267 (273)
T ss_pred             ------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                  00235678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.54  E-value=2.4e-14  Score=107.45  Aligned_cols=91  Identities=20%  Similarity=0.250  Sum_probs=63.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||.+. +..++.++|+||+||++++|++|..||........... ..... +...                  
T Consensus       193 GT~~YmAPE~l~-g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~-~~i~~-P~~~------------------  251 (932)
T PRK13184        193 GTPDYMAPERLL-GVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYR-DVILS-PIEV------------------  251 (932)
T ss_pred             CCCCCCCHHHhc-CCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhh-hhccC-hhhc------------------
Confidence            788999999954 44789999999999999999999999965432211111 00000 0000                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                           .....++..+.+++.+||..||++|++..+.+
T Consensus       252 -----~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL  283 (932)
T PRK13184        252 -----APYREIPPFLSQIAMKALAVDPAERYSSVQEL  283 (932)
T ss_pred             -----cccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence                 00124677889999999999999998765543

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.54  E-value=2.5e-14  Score=107.46  Aligned_cols=88  Identities=22%  Similarity=0.278  Sum_probs=68.3

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|||||.+.. ..++.++||||||+++||+++ |..||.......+-..+...++-..                     
T Consensus       868 vkWm~PEsl~d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~---------------------  925 (1025)
T KOG1095|consen  868 VKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDP---------------------  925 (1025)
T ss_pred             eecCCHHHHhh-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCC---------------------
Confidence            56999999665 599999999999999999986 6789977755444433333232111                     


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            ...+++.+.++|..|+..+|++||++..+++
T Consensus       926 ------P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  926 ------PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             ------CCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence                  1348889999999999999999999998875

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.53  E-value=6.7e-14  Score=92.97  Aligned_cols=94  Identities=18%  Similarity=0.204  Sum_probs=61.0

Q ss_pred             ccCcccchhhhcCC------CCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHH-HHHhCCCCCCCCCCccchHHH
Q 048170            2 VEFPYKAPESRICS------SVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLI-VRLFGNPTKETWPGANYISEL   73 (142)
Q Consensus         2 ~t~~y~~PE~~~~~------~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   73 (142)
                      ++..|+|||++.+.      ..++.++|+||+|+++++|++ |..||........... +.........           
T Consensus       164 ~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----------  232 (269)
T cd05087         164 VPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPK-----------  232 (269)
T ss_pred             CcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCC-----------
Confidence            35679999986432      135789999999999999996 9999975533322111 1100000000           


Q ss_pred             hhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           74 LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                                  .......+....+++.+|+ .+|++||++++++.
T Consensus       233 ------------~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         233 ------------PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             ------------CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence                        0001225667889999998 68999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.53  E-value=3.5e-14  Score=94.95  Aligned_cols=104  Identities=14%  Similarity=0.112  Sum_probs=64.1

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      +..|++||.+. ...++.++|+||+|+++++|++|..|+....... ....   ...... . ..............   
T Consensus       173 ~~~~~~PE~~~-~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~---~~~~~~-~-~~~~~~~~~~~~~~---  242 (283)
T cd05080         173 PVFWYAVECLK-ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMI---GPKQGQ-M-TVVRLIELLERGMR---  242 (283)
T ss_pred             CceeeCHhHhc-ccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhh---cccccc-c-chhhhhhhhhcCCC---
Confidence            45699999854 4478899999999999999999998885432111 1111   000000 0 00000000000000   


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                         .......+.++.+++.+|+..+|++||+++++++
T Consensus       243 ---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         243 ---LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             ---CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence               0112346788999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.53  E-value=5.8e-14  Score=92.53  Aligned_cols=89  Identities=19%  Similarity=0.217  Sum_probs=61.3

Q ss_pred             ccCcccchhhhcCC-CCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICS-SVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~-~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ++..|++||.+.+. ..++.++|+||+|+++++|++ |..|+...........+.....   .               + 
T Consensus       166 ~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~---~---------------~-  226 (259)
T cd05037         166 ERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHR---L---------------P-  226 (259)
T ss_pred             cCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCCC---C---------------C-
Confidence            45679999996544 478899999999999999998 4677754432221111110000   0               0 


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                                ......+.+++.+||..+|.+||++.++++
T Consensus       227 ----------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         227 ----------MPDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             ----------CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence                      001257889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.53  E-value=7.7e-15  Score=95.26  Aligned_cols=104  Identities=20%  Similarity=0.221  Sum_probs=74.5

Q ss_pred             ccCcccchhhhcCCC-CCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHH-HhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSS-VYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVR-LFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~-~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      |-++|||||.+-... +|+-++|+||+|++|+|+++|..|+..-.. .+.++-. ..+.++.-..+              
T Consensus       229 GCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-vfeql~~Vv~gdpp~l~~~--------------  293 (361)
T KOG1006|consen  229 GCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-VFEQLCQVVIGDPPILLFD--------------  293 (361)
T ss_pred             CCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-HHHHHHHHHcCCCCeecCc--------------
Confidence            457899999976543 599999999999999999999999963322 2222211 11222211111              


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                             ......+..+..|+..||.+|-+.||.-.++++++|++...
T Consensus       294 -------~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~  334 (361)
T KOG1006|consen  294 -------KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYA  334 (361)
T ss_pred             -------ccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhh
Confidence                   00123677899999999999999999999999999998543

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.53  E-value=7.4e-14  Score=93.97  Aligned_cols=95  Identities=20%  Similarity=0.231  Sum_probs=62.5

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh--CCCCcCCCChhH-HHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS--GKPLFPCGKKDH-LSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~--g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      +..|+|||.+.+ ..++.++|+||+|+++++|++  +..||....... ...............                
T Consensus       194 ~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----------------  256 (295)
T cd05097         194 PIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQI----------------  256 (295)
T ss_pred             ceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccc----------------
Confidence            457999998554 478999999999999999988  556776443222 221111110000000                


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           ........+..+.+|+.+|+..+|++||+++++++
T Consensus       257 -----~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         257 -----YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             -----cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                 00001225678999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.53  E-value=9.5e-15  Score=104.59  Aligned_cols=99  Identities=22%  Similarity=0.325  Sum_probs=70.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++. ...|+..+|.||.|+|||||+.|++||...........+.              .+..+ .+++.  
T Consensus       833 gt~nyiapevl~-r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~--------------nw~~~-l~~~~--  894 (1034)
T KOG0608|consen  833 GTPNYIAPEVLA-RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVI--------------NWRNF-LHIPY--  894 (1034)
T ss_pred             CCCcccChHHhc-ccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeee--------------ehhhc-ccccc--
Confidence            799999999955 5599999999999999999999999997662211111110              00111 11111  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC---HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT---ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t---~~~~l~~~~~~~~  126 (142)
                             .-.++.++.++|.++- -+++.|+.   ++++..||||+.+
T Consensus       895 -------~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgI  934 (1034)
T KOG0608|consen  895 -------QGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGI  934 (1034)
T ss_pred             -------ccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCcccccc
Confidence                   0237889999998854 47899985   6789999999965

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.52  E-value=5.7e-14  Score=98.37  Aligned_cols=89  Identities=19%  Similarity=0.289  Sum_probs=63.6

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +..|++||.+.+ ..++.++|+||+|++++||++ |..||.... .......+.. +...                    
T Consensus       304 ~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~-~~~~--------------------  361 (401)
T cd05107         304 PLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKR-GYRM--------------------  361 (401)
T ss_pred             CCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHc-CCCC--------------------
Confidence            467999999554 478899999999999999998 788886442 2222222111 0000                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            ......+.++.+|+.+|+..+|.+||+++++++
T Consensus       362 ------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~  394 (401)
T cd05107         362 ------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVH  394 (401)
T ss_pred             ------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                  001236778999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.52  E-value=8.4e-14  Score=92.44  Aligned_cols=93  Identities=18%  Similarity=0.236  Sum_probs=61.2

Q ss_pred             cCcccchhhhcC------CCCCChhhhHHHHHHHHHHHHh-CCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHh
Q 048170            3 EFPYKAPESRIC------SSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELL   74 (142)
Q Consensus         3 t~~y~~PE~~~~------~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (142)
                      +..|+|||++..      ...++.++|+||+||++|+|++ |..||..... ..............+.            
T Consensus       165 ~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------------  232 (269)
T cd05042         165 PLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPK------------  232 (269)
T ss_pred             cccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCC------------
Confidence            456999998532      2357789999999999999998 6788865532 2222222211110000            


Q ss_pred             hcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           75 HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                                 .......+....+++..|+ .||++||+++++++
T Consensus       233 -----------~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         233 -----------PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             -----------CcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence                       0111236677788988888 59999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.51  E-value=9.5e-14  Score=93.48  Aligned_cols=95  Identities=15%  Similarity=0.155  Sum_probs=61.9

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh--CCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS--GKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~--g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      +..|++||...+. .++.++|+||+||++|+|++  |..||........ ........                  ....
T Consensus       195 ~~~~~~pe~~~~~-~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~------------------~~~~  255 (296)
T cd05095         195 PIRWMSWESILLG-KFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFR------------------DQGR  255 (296)
T ss_pred             ccccCCHHHHhcC-CccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHh------------------hccc
Confidence            4569999985544 78999999999999999998  6677754432221 11110000                  0000


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                      ..   .......++..+.+|+.+||..||++||++.++.+
T Consensus       256 ~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         256 QV---YLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             cc---cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            00   00001235678899999999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.51  E-value=4e-14  Score=106.79  Aligned_cols=97  Identities=24%  Similarity=0.248  Sum_probs=66.8

Q ss_pred             ccCcccchhhhcCCC--CCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSS--VYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~--~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||--|+|||++-+..  .|+.++|+||+|+|||||+.   ||.+. .+... ++..+..+..+..               
T Consensus       777 GTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts-MERa~-iL~~LR~g~iP~~---------------  836 (1351)
T KOG1035|consen  777 GTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTS-MERAS-ILTNLRKGSIPEP---------------  836 (1351)
T ss_pred             ceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCch-HHHHH-HHHhcccCCCCCC---------------
Confidence            788899999965544  69999999999999999985   57544 21111 1221111111100               


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                            ..++.........+|.+||+.||++||||.++|++.||.
T Consensus       837 ------~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  837 ------ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             ------cccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence                  111122344567899999999999999999999999998

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.51  E-value=1.5e-14  Score=110.85  Aligned_cols=104  Identities=20%  Similarity=0.221  Sum_probs=63.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC--hhHHHHHHHHhCCCCCCCCCCccchHHHh-hcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKETWPGANYISELL-HSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   78 (142)
                      ||..|+|||++. ...++.++||||+||++|||++|+.||....  ...........-...        ...... ..+.
T Consensus       840 ~t~~y~aPE~~~-~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~  910 (968)
T PLN00113        840 ISSAYVAPETRE-TKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDC--------HLDMWIDPSIR  910 (968)
T ss_pred             ccccccCccccc-CCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCcc--------chhheeCcccc
Confidence            568899999954 4579999999999999999999999985331  111111111100000        000000 0000


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                      .......     ....++.+++.+|+..||++||+++++++
T Consensus       911 ~~~~~~~-----~~~~~~~~l~~~Cl~~~P~~RPt~~evl~  946 (968)
T PLN00113        911 GDVSVNQ-----NEIVEVMNLALHCTATDPTARPCANDVLK  946 (968)
T ss_pred             CCCCccH-----HHHHHHHHHHHhhCcCCchhCcCHHHHHH
Confidence            0000000     11235678999999999999999999874

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.50  E-value=3.6e-14  Score=95.20  Aligned_cols=104  Identities=21%  Similarity=0.254  Sum_probs=71.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|.|||++.+. .|+-++|.|++|++++||+.|+.||..-            +...++...+-.-++...       
T Consensus       413 gtpnyiapeilrge-eygfsvdwwalgvlmfemmagrspfdiv------------gm~n~d~ntedylfqvil-------  472 (593)
T KOG0695|consen  413 GTPNYIAPEILRGE-EYGFSVDWWALGVLMFEMMAGRSPFDIV------------GMDNPDMNTEDYLFQVIL-------  472 (593)
T ss_pred             CCCcccchhhhccc-ccCceehHHHHHHHHHHHHcCCCCccee------------cCCCcccchhHHHHHHHh-------
Confidence            79999999996655 9999999999999999999999999522            111111100000001000       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC------HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT------ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t------~~~~l~~~~~~~~  126 (142)
                       .......++++-.+..+++..|+.||.+|+.      ..++..|+||+.+
T Consensus       473 -ekqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i  522 (593)
T KOG0695|consen  473 -EKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI  522 (593)
T ss_pred             -hhcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence             0011222457777889999999999999985      4689999999954

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.50  E-value=7.6e-14  Score=95.60  Aligned_cols=94  Identities=18%  Similarity=0.184  Sum_probs=72.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |++-|.+||++.+...-++.+|.||+|++||.|..|..||.+.+...+..-+.......                     
T Consensus       214 GSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE---------------------  272 (668)
T KOG0611|consen  214 GSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE---------------------  272 (668)
T ss_pred             CCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC---------------------
Confidence            67889999996666556688999999999999999999998885554433333211111                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                              +..+..+..||+.||..+|.+|.|+.++..|=|++
T Consensus       273 --------P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  273 --------PETPSDASGLIRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             --------CCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence                    12456788999999999999999999998886655

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.49  E-value=1.4e-15  Score=106.88  Aligned_cols=98  Identities=20%  Similarity=0.232  Sum_probs=76.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. .+.|+.+.|+||+|+++|--++|..||... .+...+|....=..++..                  
T Consensus       728 GTPAYLaPEVLr-nkGyNrSLDMWSVGVIiYVsLSGTFPFNEd-EdIndQIQNAaFMyPp~P------------------  787 (888)
T KOG4236|consen  728 GTPAYLAPEVLR-NKGYNRSLDMWSVGVIIYVSLSGTFPFNED-EDINDQIQNAAFMYPPNP------------------  787 (888)
T ss_pred             CCccccCHHHHh-hccccccccceeeeEEEEEEecccccCCCc-cchhHHhhccccccCCCc------------------
Confidence            899999999954 569999999999999999999999999643 222223322111112221                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                             +++++.++.+||.++|+..-++|.+.++.+.|||+++.
T Consensus       788 -------W~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  788 -------WSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             -------hhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence                   35589999999999999999999999999999999854

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.49  E-value=5.8e-15  Score=107.33  Aligned_cols=108  Identities=23%  Similarity=0.193  Sum_probs=80.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |+-.|+|||++.+....+..+||||.|+++..|++|+.||.....+.-..                   ...........
T Consensus       486 gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-------------------~~~~~~~~~~~  546 (601)
T KOG0590|consen  486 GSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-------------------KTNNYSDQRNI  546 (601)
T ss_pred             cCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-------------------hhhcccccccc
Confidence            66789999997777667778999999999999999999996552211100                   00001111122


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                      ......+...++.+.+.+|.+||+.||.+|.|+++|++++||+.+..
T Consensus       547 ~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~  593 (601)
T KOG0590|consen  547 FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIEC  593 (601)
T ss_pred             ccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcce
Confidence            33445556778899999999999999999999999999999999853

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.49  E-value=2.1e-14  Score=101.76  Aligned_cols=95  Identities=21%  Similarity=0.289  Sum_probs=69.0

Q ss_pred             ccCcccchhhhcCC--CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICS--SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~--~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      |...|||||++...  ..|+..+|||+||+|+|||++|..||.....++   |+...|..  .                 
T Consensus       552 gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq---IifmVGrG--~-----------------  609 (678)
T KOG0193|consen  552 GSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ---IIFMVGRG--Y-----------------  609 (678)
T ss_pred             cchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh---eEEEeccc--c-----------------
Confidence            45679999997643  468899999999999999999999997333333   33222221  0                 


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                       -..+.......++.++++|+..|+.+++++||.+.+|+.
T Consensus       610 -l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  610 -LMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             -cCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence             001112223557789999999999999999999998774

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.49  E-value=2.3e-13  Score=90.45  Aligned_cols=94  Identities=19%  Similarity=0.238  Sum_probs=59.8

Q ss_pred             ccCcccchhhhcC------CCCCChhhhHHHHHHHHHHHHhC-CCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHH
Q 048170            2 VEFPYKAPESRIC------SSVYMTPHDVWAVGCIFAEMVSG-KPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISEL   73 (142)
Q Consensus         2 ~t~~y~~PE~~~~------~~~~~~~~Diws~g~~l~~l~~g-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (142)
                      ++..|+|||++..      ...++.++|+||+|+++|+|+++ ..||..... .....+..........           
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----------  231 (268)
T cd05086         163 VPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFK-----------  231 (268)
T ss_pred             CcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCC-----------
Confidence            4567999998532      12456789999999999999974 677765433 2222222110000000           


Q ss_pred             hhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           74 LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                                  .......+....+++..|+ .+|++||+++++++
T Consensus       232 ------------~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         232 ------------PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             ------------CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence                        0001225667889999999 67999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.48  E-value=1.6e-13  Score=91.84  Aligned_cols=105  Identities=17%  Similarity=0.273  Sum_probs=62.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|+|||.+.+ ..++.++|+||+|+++++|+++..+......    ......+......     .............
T Consensus       174 ~~~~y~apE~~~~-~~~~~~~Di~slG~il~ellt~~~~~~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~~~~~  243 (284)
T cd05079         174 SPVFWYAPECLIQ-SKFYIASDVWSFGVTLYELLTYCDSESSPMT----LFLKMIGPTHGQM-----TVTRLVRVLEEGK  243 (284)
T ss_pred             CCccccCHHHhcc-CCCCccccchhhhhhhhhhhcCCCCCccccc----hhhhhcccccccc-----cHHHHHHHHHcCc
Confidence            3456999999654 4788899999999999999997655422100    0111111111000     0001110000000


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                      ..   .....++.++.+|+.+||+.+|.+||+++++++
T Consensus       244 ~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  278 (284)
T cd05079         244 RL---PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE  278 (284)
T ss_pred             cC---CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            00   112346788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.48  E-value=1.2e-13  Score=92.24  Aligned_cols=104  Identities=19%  Similarity=0.267  Sum_probs=62.9

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      +..|++||.+.+ ..++.++|+||+|+++++|++|..|+........    ...+....     ..........+.....
T Consensus       175 ~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~----~~~~~~~~-----~~~~~~~~~~~~~~~~  244 (284)
T cd05038         175 PIFWYAPECLRT-SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFL----RMIGIAQG-----QMIVTRLLELLKEGER  244 (284)
T ss_pred             cccccCcHHHcc-CCCCcccchHHHhhhhheeeccCCCcccccchhc----cccccccc-----cccHHHHHHHHHcCCc
Confidence            345999998544 4788899999999999999999988754311110    00000000     0001111111110000


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                      .   ......+.++.+++.+||..+|.+||++.++++
T Consensus       245 ~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         245 L---PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             C---CCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            0   001235678899999999999999999999873

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.47  E-value=2.9e-13  Score=96.81  Aligned_cols=108  Identities=13%  Similarity=0.114  Sum_probs=64.3

Q ss_pred             cCcccchhhhcCCCC---------------------CChhhhHHHHHHHHHHHHhCCC-CcCCCChhHHHHHHHHhCCCC
Q 048170            3 EFPYKAPESRICSSV---------------------YMTPHDVWAVGCIFAEMVSGKP-LFPCGKKDHLSLIVRLFGNPT   60 (142)
Q Consensus         3 t~~y~~PE~~~~~~~---------------------~~~~~Diws~g~~l~~l~~g~~-~~~~~~~~~~~~~~~~~~~~~   60 (142)
                      |+.|++||.+.....                     .+...|+||+||++++|+++.. ++........  ......   
T Consensus       373 tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~--~~~~~~---  447 (507)
T PLN03224        373 DPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNT--ELRQYD---  447 (507)
T ss_pred             CcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhh--HHhhcc---
Confidence            678999998643211                     1124699999999999999864 6642211000  000000   


Q ss_pred             CCCCCCccchHHHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCC---CCCCCHHHHhcCCCccc
Q 048170           61 KETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDP---DHRVTANDALCIGTSEK  125 (142)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p---~~R~t~~~~l~~~~~~~  125 (142)
                             .....+. ...... .. ...+...+....+|+.+||..+|   .+|+|++|+|+||||..
T Consensus       448 -------~~~~~~r-~~~~~~-~~-~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        448 -------NDLNRWR-MYKGQK-YD-FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             -------chHHHHH-hhcccC-CC-cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence                   0000000 000000 00 11234468889999999999866   78999999999999964

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.46  E-value=2.2e-14  Score=105.13  Aligned_cols=100  Identities=19%  Similarity=0.252  Sum_probs=75.6

Q ss_pred             ccCcccchhhhcCCC----CCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSS----VYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~----~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||++|||||++.+..    .|+..+|+||+|++-.||.-|.+|+....  ....++.....|++..              
T Consensus       185 GtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH--PmraLF~IpRNPPPkL--------------  248 (953)
T KOG0587|consen  185 GTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH--PMRALFLIPRNPPPKL--------------  248 (953)
T ss_pred             CCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc--hhhhhccCCCCCCccc--------------
Confidence            799999999976543    36778999999999999999999985332  2222333222222222              


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                               ..++..+.++.+||+.||..|-.+||+..++++|||+.+.
T Consensus       249 ---------krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~  288 (953)
T KOG0587|consen  249 ---------KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ  288 (953)
T ss_pred             ---------cchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence                     1123468899999999999999999999999999999843

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.46  E-value=3.2e-13  Score=92.09  Aligned_cols=88  Identities=15%  Similarity=0.201  Sum_probs=68.4

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ...||++|.+. ...|+.++|+||||+++|||.+ |+.|+...++...+..+...-+...                    
T Consensus       461 PvkWMslEal~-n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQ--------------------  519 (563)
T KOG1024|consen  461 PVKWMSLEALQ-NSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQ--------------------  519 (563)
T ss_pred             cccccCHHHHh-hhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecC--------------------
Confidence            46799999954 4599999999999999999875 7899976677666555442111100                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                             .-++++++-.++-.|+..+|++||+.+|+.
T Consensus       520 -------P~NCPDeLf~vMacCWallpeeRPsf~Qlv  549 (563)
T KOG1024|consen  520 -------PFNCPDELFTVMACCWALLPEERPSFSQLV  549 (563)
T ss_pred             -------CCCCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence                   124889999999999999999999999976

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.45  E-value=9.9e-14  Score=92.77  Aligned_cols=104  Identities=18%  Similarity=0.270  Sum_probs=62.0

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCCc
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEPA   83 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (142)
                      ..|+|||.+. ...++.++|+||+|+++++|+++..++.......    ....+.....    ................ 
T Consensus       175 ~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~-  244 (284)
T cd05081         175 IFWYAPESLT-ESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEF----MRMMGNDKQG----QMIVYHLIELLKNNGR-  244 (284)
T ss_pred             eEeeCHHHhc-cCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhh----hhhccccccc----ccchHHHHHHHhcCCc-
Confidence            3599999954 4478899999999999999999866543221111    1111110000    0000001000000000 


Q ss_pred             hhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           84 DLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        84 ~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                        ......++.++.+|+.+||..+|++|||++++++
T Consensus       245 --~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         245 --LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             --CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence              0112346778999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.45  E-value=3.5e-14  Score=98.24  Aligned_cols=102  Identities=18%  Similarity=0.258  Sum_probs=72.1

Q ss_pred             ccCcccchhhhcCC---CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICS---SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~---~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||-||++||.+.-+   ...+.++||||+|+++|..+.|+-||......+  .|...........              .
T Consensus       642 GTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ--dILqeNTIlkAtE--------------V  705 (775)
T KOG1151|consen  642 GTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ--DILQENTILKATE--------------V  705 (775)
T ss_pred             ceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH--HHHhhhchhccee--------------c
Confidence            78999999986533   347789999999999999999999996542211  1111100000000              0


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                      +++..      +.++.++++||++||.+.-+.|....++..||+|.-
T Consensus       706 qFP~K------PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  706 QFPPK------PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             cCCCC------CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence            00101      237889999999999999999999999999999875

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.40  E-value=1.5e-12  Score=95.46  Aligned_cols=86  Identities=22%  Similarity=0.362  Sum_probs=63.2

Q ss_pred             cccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            5 PYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         5 ~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      .|||||.+.. ..|+.++||||+|++|||+++ |..||.+-. ...+...+....+.                       
T Consensus       486 kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~-----------------------  541 (609)
T KOG0200|consen  486 KWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRM-----------------------  541 (609)
T ss_pred             eecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCC-----------------------
Confidence            4999999655 699999999999999999986 678886532 22222222211111                       


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                          +....++.+..++++.|++.+|++||++.++.
T Consensus       542 ----~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~  573 (609)
T KOG0200|consen  542 ----EQPEHCSDEIYDLMKSCWNADPEDRPTFSECV  573 (609)
T ss_pred             ----CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence                11234788999999999999999999998865

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.29  E-value=4.8e-12  Score=91.83  Aligned_cols=92  Identities=16%  Similarity=0.148  Sum_probs=69.1

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|.|||.+... .+++++|+|++|+++|||++ |+.|+.+....++-+.+.....                        
T Consensus       279 fAWCaPEsLrh~-kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~er------------------------  333 (1039)
T KOG0199|consen  279 FAWCAPESLRHR-KFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGER------------------------  333 (1039)
T ss_pred             ccccCHhHhccc-cccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccccc------------------------
Confidence            458999996544 89999999999999999986 6799988855554333331111                        


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                         ....+.++++..+++..|+..+|.+|||+..|.+.-+.
T Consensus       334 ---LpRPk~csedIY~imk~cWah~paDRptFsair~~~~l  371 (1039)
T KOG0199|consen  334 ---LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL  371 (1039)
T ss_pred             ---CCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence               11124488999999999999999999999988654443

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.28  E-value=9.7e-13  Score=96.04  Aligned_cols=87  Identities=18%  Similarity=0.261  Sum_probs=69.0

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHH-HHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAE-MVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~-l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ..|.|||.+.. .+++.++||||+|+++|| |..|..||=.- +.+.+..+..-...|++.+                  
T Consensus       798 iRWTAPEAIa~-RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmD------------------  858 (996)
T KOG0196|consen  798 IRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMD------------------  858 (996)
T ss_pred             eeecChhHhhh-cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCC------------------
Confidence            56999999554 499999999999999999 45788888555 4455555555444444443                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                                ++..++.|+..|+++|-+.||++.||+.
T Consensus       859 ----------CP~aL~qLMldCWqkdR~~RP~F~qiV~  886 (996)
T KOG0196|consen  859 ----------CPAALYQLMLDCWQKDRNRRPKFAQIVS  886 (996)
T ss_pred             ----------CcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence                      8899999999999999999999998763

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.27  E-value=6.8e-12  Score=94.16  Aligned_cols=99  Identities=25%  Similarity=0.283  Sum_probs=77.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|.|||+++ ...|+..+|.|++|+++|+.+.|..||.+. ..+.+.+.+.....-+..+                 
T Consensus       220 gTPeyiaPeVil-rqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~d-----------------  281 (1205)
T KOG0606|consen  220 GTPEYIAPEVIL-RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEED-----------------  281 (1205)
T ss_pred             CCccccChhhhh-hhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccC-----------------
Confidence            799999999955 458999999999999999999999999877 3344444444333222222                 


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCC---HHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT---ANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t---~~~~l~~~~~~~~~  127 (142)
                               .....++++++..+|+.+|..|..   +-++.+|+||..+.
T Consensus       282 ---------ea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD  322 (1205)
T KOG0606|consen  282 ---------EALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD  322 (1205)
T ss_pred             ---------cCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence                     237789999999999999999974   56788999999653

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.24  E-value=4.6e-11  Score=86.17  Aligned_cols=87  Identities=21%  Similarity=0.329  Sum_probs=67.0

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|.|||.+ .-..++.++|||+||++|||+++ |-.||.+.+..+.+.+.+..-+                        
T Consensus       430 IKWTAPEsL-AyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyR------------------------  484 (1157)
T KOG4278|consen  430 IKWTAPESL-AYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYR------------------------  484 (1157)
T ss_pred             ccccCcccc-cccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccc------------------------
Confidence            459999984 44578899999999999999985 7789987777766555432111                        


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                         ++...++++.+.+|+..|++++|..||+++++-
T Consensus       485 ---M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiH  517 (1157)
T KOG4278|consen  485 ---MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIH  517 (1157)
T ss_pred             ---ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence               111245888999999999999999999988753

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.24  E-value=5.5e-12  Score=88.87  Aligned_cols=89  Identities=19%  Similarity=0.281  Sum_probs=66.5

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ...|+|||.+. ...|+.++||||||+++||+++ |..||.+.....+...+...+......                  
T Consensus       325 PirWLAPEtl~-~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~------------------  385 (474)
T KOG0194|consen  325 PIRWLAPETLN-TGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIP------------------  385 (474)
T ss_pred             cceecChhhhc-cCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCC------------------
Confidence            35799999954 4499999999999999999987 788998776665554442211111110                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                              ...+.+...++..|+..+|+.|+++.++.
T Consensus       386 --------~~~p~~~~~~~~~c~~~~p~~R~tm~~i~  414 (474)
T KOG0194|consen  386 --------SKTPKELAKVMKQCWKKDPEDRPTMSTIK  414 (474)
T ss_pred             --------CCCHHHHHHHHHHhccCChhhccCHHHHH
Confidence                    13677888999999999999999998765

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.23  E-value=1e-11  Score=89.27  Aligned_cols=86  Identities=24%  Similarity=0.308  Sum_probs=63.5

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHH-hCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMV-SGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ..||+||- ..-..++.++|||-||+.+||++ .|.-||++-.. +.+-.+ +..++                       
T Consensus       556 IKWmaPES-INfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i-EnGeR-----------------------  610 (974)
T KOG4257|consen  556 IKWMAPES-INFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI-ENGER-----------------------  610 (974)
T ss_pred             eeecCccc-cchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe-cCCCC-----------------------
Confidence            46999998 55568999999999999999976 67888976633 222221 11111                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                          ....+.+++.+..|+.+|+.++|.+||++.++.
T Consensus       611 ----lP~P~nCPp~LYslmskcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  611 ----LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             ----CCCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence                112245889999999999999999999988754

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.15  E-value=4.8e-11  Score=86.10  Aligned_cols=102  Identities=17%  Similarity=0.093  Sum_probs=70.1

Q ss_pred             ccCcccchhhhc--CCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRI--CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~--~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||++|||||+-.  ....|+..+|+|+.|+.-.|+..-++|......-+.-.+...    +..+.+.             
T Consensus       174 GtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTk----S~~qpp~-------------  236 (829)
T KOG0576|consen  174 GTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTK----SGFQPPT-------------  236 (829)
T ss_pred             CCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhc----cCCCCCc-------------
Confidence            899999999732  234799999999999999999877766543322221111111    1111110             


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                            .+--...+..+++|++.+|..+|++||+++.++.|||+..-
T Consensus       237 ------lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  237 ------LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             ------ccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence                  01112367788999999999999999999999999998753

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.10  E-value=2.1e-11  Score=88.10  Aligned_cols=107  Identities=21%  Similarity=0.243  Sum_probs=65.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhH-HHHHHHHhCCCCCCCCCC----ccchHHHhh
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDH-LSLIVRLFGNPTKETWPG----ANYISELLH   75 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~   75 (142)
                      ||..|.+||+.-.++.|+..+|.|||||++|+.++|..||... .... ...+......++......    ....-++..
T Consensus       185 GT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~  264 (732)
T KOG4250|consen  185 GTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSS  264 (732)
T ss_pred             CchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeec
Confidence            8999999999554579999999999999999999999999655 2221 111222223222222111    111111222


Q ss_pred             cCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCC
Q 048170           76 SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT  113 (142)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t  113 (142)
                      .++.     .-.+.+.....+-.++..+|..++++|..
T Consensus       265 ~lP~-----p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~  297 (732)
T KOG4250|consen  265 TLPQ-----PNHLSRGLATRLTKWLASMLEWNPRKRGH  297 (732)
T ss_pred             cCCC-----cccccHHHHhhhhHHHHHHHhhhHHHhCC
Confidence            2322     11112223445567888999999999984

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.10  E-value=1.4e-10  Score=81.58  Aligned_cols=90  Identities=23%  Similarity=0.258  Sum_probs=58.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHH--HHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI--VRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||..||+||.+.+. .|+.++|||++|++|+|++.-   |.+. .......  ++... .++..                
T Consensus       424 gt~~YmsPEQi~g~-~y~~kvdIyaLGlil~EL~~~---f~T~-~er~~t~~d~r~g~-ip~~~----------------  481 (516)
T KOG1033|consen  424 GTLLYMSPEQIRGQ-QYSEKVDIYALGLILAELLIQ---FSTQ-FERIATLTDIRDGI-IPPEF----------------  481 (516)
T ss_pred             cccccCCHHHHhhh-hhhhhcchhhHHHHHHHHHHH---hccH-HHHHHhhhhhhcCC-CChHH----------------
Confidence            78999999996655 999999999999999999872   2211 1111111  11000 00000                


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                                ..--++-..|+..+|.+.|.+||++.+.-.|.|.
T Consensus       482 ----------~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  482 ----------LQDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             ----------hhcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence                      0012355699999999999999987776666553

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.09  E-value=1.2e-10  Score=83.12  Aligned_cols=93  Identities=15%  Similarity=0.224  Sum_probs=64.5

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHH--hCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMV--SGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~--~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ..|||+|.++.+ +++.++|+|+||+++||++  ..+.||.....++. ...-..+.......                 
T Consensus       703 iRwmawEsillg-kFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~-----------------  764 (807)
T KOG1094|consen  703 IRWMAWESILLG-KFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQV-----------------  764 (807)
T ss_pred             eeehhHHHHHhc-cccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcce-----------------
Confidence            569999997766 9999999999999999975  45678865533332 22222111111111                 


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                          ......-++.++.+++.+|+..+..+||+++++.
T Consensus       765 ----~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh  798 (807)
T KOG1094|consen  765 ----VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLH  798 (807)
T ss_pred             ----eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHH
Confidence                1111234788899999999999999999999874

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.09  E-value=1.2e-10  Score=80.68  Aligned_cols=102  Identities=23%  Similarity=0.270  Sum_probs=61.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC---hhHHHHH-HHHhCCCCCCCCCCccchHHHh-hc
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK---KDHLSLI-VRLFGNPTKETWPGANYISELL-HS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~   76 (142)
                      ||..|++||.... ...+.++||||||+++.|+++|+.+.....   ...+... ...+...         ...+.. ..
T Consensus       240 gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~---------~~~eiiD~~  309 (361)
T KOG1187|consen  240 GTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG---------KLREIVDPR  309 (361)
T ss_pred             CCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc---------chhheeCCC
Confidence            7899999999544 589999999999999999999997776431   1111111 1111110         011110 11


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                      +........     ..-..+..+..+|++.+|+.||++.+++
T Consensus       310 l~~~~~~~~-----~~~~~~~~~a~~C~~~~~~~RP~m~~Vv  346 (361)
T KOG1187|consen  310 LKEGEYPDE-----KEVKKLAELALRCLRPDPKERPTMSQVV  346 (361)
T ss_pred             ccCCCCChH-----HHHHHHHHHHHHHcCcCCCcCcCHHHHH
Confidence            110000000     0112356788899999999999999874

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.06  E-value=6e-11  Score=82.47  Aligned_cols=107  Identities=22%  Similarity=0.166  Sum_probs=60.2

Q ss_pred             ccCcccchhhhcCCCCCC-----hhhhHHHHHHHHHHHHhCCCCcC-CC-ChhHHHHHHHHhCCCCCCCCCCccchHHHh
Q 048170            2 VEFPYKAPESRICSSVYM-----TPHDVWAVGCIFAEMVSGKPLFP-CG-KKDHLSLIVRLFGNPTKETWPGANYISELL   74 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~-----~~~Diws~g~~l~~l~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (142)
                      ||..|||||++-+..++.     .+.||||+|.|||||++.-.-+. +. ...++..-. .+|.     .|.....+...
T Consensus       380 GT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~-evG~-----hPt~e~mq~~V  453 (534)
T KOG3653|consen  380 GTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA-EVGN-----HPTLEEMQELV  453 (534)
T ss_pred             hhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH-HhcC-----CCCHHHHHHHH
Confidence            899999999976655555     46899999999999998644332 11 111211111 1111     11111112221


Q ss_pred             hcCCCCC--CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHH
Q 048170           75 HSLPQCE--PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAND  116 (142)
Q Consensus        75 ~~~~~~~--~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~  116 (142)
                      ..-...+  +..+..  .....-+++.+..|+..|++.|+||.-
T Consensus       454 V~kK~RP~~p~~W~~--h~~~~~l~et~EeCWDhDaeARLTA~C  495 (534)
T KOG3653|consen  454 VRKKQRPKIPDAWRK--HAGMAVLCETIEECWDHDAEARLTAGC  495 (534)
T ss_pred             HhhccCCCChhhhhc--CccHHHHHHHHHHHcCCchhhhhhhHH
Confidence            1111111  111111  124455689999999999999999863

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.02  E-value=2.3e-10  Score=81.89  Aligned_cols=91  Identities=20%  Similarity=0.313  Sum_probs=69.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||.-|||||++.   ....++|.||+|++.++|++|..||.+   +....|... ..                       
T Consensus       155 gt~eymApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~---~~~~~Il~~-~~-----------------------  204 (612)
T KOG0603|consen  155 GTYEYRAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGG---DTMKRILKA-EL-----------------------  204 (612)
T ss_pred             cchhhhhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCch---HHHHHHhhh-cc-----------------------
Confidence            788999999954   677899999999999999999999975   222222221 00                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH-----HHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA-----NDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~-----~~~l~~~~~~~~~  127 (142)
                       ..    ...++..+++++..++..+|.+|+.+     .++++|+||..+.
T Consensus       205 -~~----p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~  250 (612)
T KOG0603|consen  205 -EM----PRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSID  250 (612)
T ss_pred             -CC----chhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeee
Confidence             00    12367788999999999999999864     6899999999764

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.00  E-value=1.3e-09  Score=71.87  Aligned_cols=89  Identities=15%  Similarity=0.153  Sum_probs=61.4

Q ss_pred             cCcccchhhhcCCCC--CChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            3 EFPYKAPESRICSSV--YMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         3 t~~y~~PE~~~~~~~--~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      .+.||+||.+.....  .-.++|+|||.+++||+-+...||..-. .+...++.-. +.               .     
T Consensus       349 ~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkiale-gl---------------r-----  407 (448)
T KOG0195|consen  349 SPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALE-GL---------------R-----  407 (448)
T ss_pred             CcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhc-cc---------------c-----
Confidence            367999999543211  3368999999999999999999996442 2222222110 00               0     


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                            ....++.+..+..|+.-|++.||.+||.++.++
T Consensus       408 ------v~ippgis~hm~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  408 ------VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             ------ccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence                  012245788889999999999999999988765

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.95  E-value=2.2e-09  Score=68.06  Aligned_cols=61  Identities=31%  Similarity=0.510  Sum_probs=51.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ++..|++||.+......+...|+|++|++++++                                               
T Consensus       155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------------------  187 (215)
T cd00180         155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------------------  187 (215)
T ss_pred             CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------
Confidence            456799999854433778899999999999998                                               


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCC
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIG  121 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~  121 (142)
                                  ....+++.+|+..+|++||+++++++++
T Consensus       188 ------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 ------------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             ------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                        3577999999999999999999998764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=98.94  E-value=2.7e-09  Score=79.14  Aligned_cols=87  Identities=16%  Similarity=0.167  Sum_probs=65.0

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHH-hCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMV-SGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ..|||=|.+ ....|++.+||||||+++||++ +|..|+.+.....+..+++...+-+.                     
T Consensus       864 ikwmale~i-~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsq---------------------  921 (1177)
T KOG1025|consen  864 IKWMALESI-RIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQ---------------------  921 (1177)
T ss_pred             cHHHHHHHh-hccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCC---------------------
Confidence            346777773 3458999999999999999987 57889987766555555543332111                     


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                            .+.++-++.-++.+||..|+..||+++++.
T Consensus       922 ------PpiCtiDVy~~mvkCwmid~~~rp~fkel~  951 (1177)
T KOG1025|consen  922 ------PPICTIDVYMVMVKCWMIDADSRPTFKELA  951 (1177)
T ss_pred             ------CCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence                  134788889999999999999999998764

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.92  E-value=3.7e-10  Score=78.17  Aligned_cols=101  Identities=18%  Similarity=0.148  Sum_probs=55.3

Q ss_pred             ccCcccchhhhcCCCC---CC--hhhhHHHHHHHHHHHHhCC----------CCcCCCChhHHHHHHHHhCCCCCCCCCC
Q 048170            2 VEFPYKAPESRICSSV---YM--TPHDVWAVGCIFAEMVSGK----------PLFPCGKKDHLSLIVRLFGNPTKETWPG   66 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~---~~--~~~Diws~g~~l~~l~~g~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (142)
                      ||-.|||||++-..-+   +.  ..+||||||.|+||++..-          +||.+-..          ..|+.+....
T Consensus       382 GTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp----------~DPs~eeMrk  451 (513)
T KOG2052|consen  382 GTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP----------SDPSFEEMRK  451 (513)
T ss_pred             ceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC----------CCCCHHHHhc
Confidence            7889999999533222   22  4589999999999997531          23321100          0000000000


Q ss_pred             ccchHHHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           67 ANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                      ..=..++...+++.+....      .-..+..+++.|+..+|..|.||-.+.
T Consensus       452 VVCv~~~RP~ipnrW~s~~------~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  452 VVCVQKLRPNIPNRWKSDP------ALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             ceeecccCCCCCcccccCH------HHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence            1111222222232222111      223456899999999999999987665

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.90  E-value=1.5e-09  Score=68.69  Aligned_cols=52  Identities=27%  Similarity=0.341  Sum_probs=40.1

Q ss_pred             cCcccchhhhcC---CCCCChhhhHHHHHHHHHHHHhCCCCcCCC--ChhHHHHHHH
Q 048170            3 EFPYKAPESRIC---SSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVR   54 (142)
Q Consensus         3 t~~y~~PE~~~~---~~~~~~~~Diws~g~~l~~l~~g~~~~~~~--~~~~~~~~~~   54 (142)
                      --.|||||.+-.   .+.|+.++||||+|+++.||++++.||..-  ..+++.+.++
T Consensus       211 CkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  211 CKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE  267 (282)
T ss_pred             CCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence            357999998543   447999999999999999999999999755  3345554443

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.63  E-value=7.9e-08  Score=73.58  Aligned_cols=90  Identities=31%  Similarity=0.483  Sum_probs=58.4

Q ss_pred             CcccchhhhcCCC---------C-CChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHH
Q 048170            4 FPYKAPESRICSS---------V-YMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISE   72 (142)
Q Consensus         4 ~~y~~PE~~~~~~---------~-~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (142)
                      ..|.|||.+....         . .+++-||+|.||+++|++. |.++|.      +.++.......             
T Consensus       191 tCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~------LSQL~aYr~~~-------------  251 (1431)
T KOG1240|consen  191 TCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT------LSQLLAYRSGN-------------  251 (1431)
T ss_pred             eeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc------HHHHHhHhccC-------------
Confidence            3699999865411         2 5678999999999999976 577774      11221111100             


Q ss_pred             HhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           73 LLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                            ........+..  -....+.++..|+++||++|.+|++.|+.
T Consensus       252 ------~~~~e~~Le~I--ed~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  252 ------ADDPEQLLEKI--EDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             ------ccCHHHHHHhC--cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence                  00111111222  23468899999999999999999998864

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.62  E-value=1.3e-08  Score=68.06  Aligned_cols=77  Identities=18%  Similarity=0.351  Sum_probs=48.8

Q ss_pred             cCcccchhhhcCC-------CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhh
Q 048170            3 EFPYKAPESRICS-------SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLH   75 (142)
Q Consensus         3 t~~y~~PE~~~~~-------~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (142)
                      +..|.+||.....       ..++.+.|.|++|+++|.|+++..||..........                   .    
T Consensus       205 ~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~-------------------~----  261 (288)
T PF14531_consen  205 PVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPE-------------------W----  261 (288)
T ss_dssp             -TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSG-------------------G----
T ss_pred             CcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccccc-------------------c----
Confidence            4568899975332       247889999999999999999999996442111000                   0    


Q ss_pred             cCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCC
Q 048170           76 SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHR  111 (142)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  111 (142)
                              .+..+. ++++..+.||.++|+++|.+|
T Consensus       262 --------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  262 --------DFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             --------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             --------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence                    111222 588899999999999999987

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.59  E-value=6.5e-08  Score=73.55  Aligned_cols=98  Identities=18%  Similarity=0.241  Sum_probs=74.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHH-HHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLS-LIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+-|.+||..++. .....+|.|+.|+++++.++|.+||.....+++. .+.. ..                       
T Consensus       997 ~t~~~laPe~~lg~-~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~-~~----------------------- 1051 (1205)
T KOG0606|consen  997 GTPDYLAPEILLGR-RHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILN-RD----------------------- 1051 (1205)
T ss_pred             CCCcccCCcccccc-cCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhcccc-CC-----------------------
Confidence            68889999996554 7788899999999999999999999877554432 1111 00                       


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHH---HHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN---DALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~---~~l~~~~~~~~  126 (142)
                        .++.......+.++++++.++|..++.+|..+.   ++..|+||+.+
T Consensus      1052 --~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1052 --IPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred             --CCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence              111111233788899999999999999999877   88899999965

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.50  E-value=4.5e-07  Score=58.30  Aligned_cols=42  Identities=29%  Similarity=0.433  Sum_probs=35.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC   43 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~   43 (142)
                      ++..|++||.+.+...++.++|+|++|+++++|++|+.||..
T Consensus       161 ~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      161 GTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            456799999853555778899999999999999999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.42  E-value=3.3e-06  Score=56.76  Aligned_cols=103  Identities=21%  Similarity=0.345  Sum_probs=69.3

Q ss_pred             ccCcccchhhhcCC--CCCChhhhHHHHHHHHHHHHhCCCCcCCCCh----hHHHHHHHHhCCC-CCCCCCCccchHHHh
Q 048170            2 VEFPYKAPESRICS--SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK----DHLSLIVRLFGNP-TKETWPGANYISELL   74 (142)
Q Consensus         2 ~t~~y~~PE~~~~~--~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   74 (142)
                      ||..|++||.+.+.  ...+...|+|++|+++++++.|..||.....    ......+.....+ ..........     
T Consensus       170 ~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  244 (384)
T COG0515         170 GTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNP-----  244 (384)
T ss_pred             cccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCcccc-----
Confidence            68899999996653  5788999999999999999999999765532    2333333322211 0000000000     


Q ss_pred             hcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           75 HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                                     ........+++.+++..+|..|.+..+...+.+..
T Consensus       245 ---------------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~  279 (384)
T COG0515         245 ---------------ELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA  279 (384)
T ss_pred             ---------------chhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhh
Confidence                           11235678999999999999999999877775544

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=98.37  E-value=1.3e-07  Score=62.44  Aligned_cols=100  Identities=20%  Similarity=0.163  Sum_probs=63.6

Q ss_pred             cCcccchhhhcC----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh--hHHHHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            3 EFPYKAPESRIC----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         3 t~~y~~PE~~~~----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      +..|-+||++..    .-...++.|+|.||+++|.+++|..|++....  ..........+.                  
T Consensus       183 ~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~r------------------  244 (378)
T KOG1345|consen  183 VNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKR------------------  244 (378)
T ss_pred             hcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcc------------------
Confidence            456888987532    22356789999999999999999999974411  111111111111                  


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCC---CCHHHHhcCCCcc
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHR---VTANDALCIGTSE  124 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R---~t~~~~l~~~~~~  124 (142)
                          ........+.-+++.+..+.++-|..++++|   .+++.-....|..
T Consensus       245 ----k~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E  291 (378)
T KOG1345|consen  245 ----KNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE  291 (378)
T ss_pred             ----cCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence                1112233445578888999999999999999   4555555555544

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.37  E-value=1.6e-06  Score=62.00  Aligned_cols=94  Identities=17%  Similarity=0.149  Sum_probs=60.5

Q ss_pred             cccchhhhcCCC--C----CChhhhHHHHHHHHHHHHhCCCCcCCC--ChhHHHHHHHHhCC-CCCCCCCCccchHHHhh
Q 048170            5 PYKAPESRICSS--V----YMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGN-PTKETWPGANYISELLH   75 (142)
Q Consensus         5 ~y~~PE~~~~~~--~----~~~~~Diws~g~~l~~l~~g~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   75 (142)
                      -|.|||.+....  .    .+.+.|+||+|++++|+++...||...  .... ..++..... ......           
T Consensus       116 lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~~~~~~~~~r-----------  183 (484)
T KOG1023|consen  116 LWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP-DEIILRVKKGGSNPFR-----------  183 (484)
T ss_pred             hccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCCh-HHHHHHHHhcCCCCcC-----------
Confidence            489999965531  1    467799999999999999999999764  2222 222221111 111111           


Q ss_pred             cCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           76 SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                              +.........+++..++..|+..+|..||+++++-
T Consensus       184 --------P~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  184 --------PSIELLNELPPELLLLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             --------cchhhhhhcchHHHHHHHHhcccChhhCccHHHHH
Confidence                    11111113555789999999999999999998764

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.29  E-value=1.2e-07  Score=69.69  Aligned_cols=100  Identities=16%  Similarity=0.216  Sum_probs=72.4

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      ++.|++||...+........|+||.|+++..+++|..|............ .                      +.....
T Consensus       192 s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~-~----------------------~~~~~~  248 (601)
T KOG0590|consen  192 SPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYS-S----------------------WKSNKG  248 (601)
T ss_pred             CCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccce-e----------------------eccccc
Confidence            88999999977656778899999999999999999988864422110000 0                      000000


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                      ..-...+...+....+++.+++..+|+.|.+.+++..++|+..
T Consensus       249 ~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  249 RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             ccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence            0011223457788899999999999999999999999999987

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.06  E-value=1.2e-05  Score=56.14  Aligned_cols=89  Identities=22%  Similarity=0.277  Sum_probs=57.5

Q ss_pred             CccCcccchhhhcCCC----C-CChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhh
Q 048170            1 EVEFPYKAPESRICSS----V-YMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLH   75 (142)
Q Consensus         1 ~~t~~y~~PE~~~~~~----~-~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (142)
                      +|+-.-||||+.....    . .-.++|.|+.|.+-||++....||-....-.+...-                      
T Consensus       412 GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~----------------------  469 (598)
T KOG4158|consen  412 GGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT----------------------  469 (598)
T ss_pred             CCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh----------------------
Confidence            3556679999843211    1 124689999999999999988898653221111100                      


Q ss_pred             cCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHH
Q 048170           76 SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN  115 (142)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~  115 (142)
                          .....+......++..+++++..+|++||++|++..
T Consensus       470 ----Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  470 ----YQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             ----hhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence                000111122245788899999999999999999843

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.88  E-value=2.8e-06  Score=62.40  Aligned_cols=107  Identities=19%  Similarity=0.169  Sum_probs=74.3

Q ss_pred             CcccchhhhcCCCCCChhhhHHHHHHHHHHHH-hCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCC
Q 048170            4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMV-SGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP   82 (142)
Q Consensus         4 ~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (142)
                      .-|.+||.+.+ ...+.++|++|+|+..|.+. .|+..+.+.+......+............                  
T Consensus       173 ~~f~apE~~~~-~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~------------------  233 (700)
T KOG2137|consen  173 LNFLAPEYLLG-TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGY------------------  233 (700)
T ss_pred             cccccchhhcc-ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccc------------------
Confidence            45899999665 57888999999999999888 55555544433222222222111111110                  


Q ss_pred             chhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccccccc
Q 048170           83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVK  135 (142)
Q Consensus        83 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~~~~  135 (142)
                            ...++.++++=+.++|..+..-||++..+...+||.+...+....++
T Consensus       234 ------s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~~~aLrfLD  280 (700)
T KOG2137|consen  234 ------SNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPGLKALRFLD  280 (700)
T ss_pred             ------cccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCchhhhhhhcc
Confidence                  14478899999999999999999999999999999987666544443

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.33  E-value=0.00025  Score=48.65  Aligned_cols=91  Identities=16%  Similarity=0.025  Sum_probs=57.6

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCc-CCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF-PCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      -++|-+||. -...+.+.++|||+||.-..+|..+..-- .+...... ..+...                         
T Consensus       245 ~~g~~a~~s-g~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~-------------------------  298 (458)
T KOG1266|consen  245 LPGFSAPES-GTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANV-------------------------  298 (458)
T ss_pred             CCccccCCc-CcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhh-------------------------
Confidence            356777776 33446778899999998888998875321 11110000 000000                         


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                             .+..-...-++++.+||+..|+.||++..++.||..-++
T Consensus       299 -------i~~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeV  337 (458)
T KOG1266|consen  299 -------IIGLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEV  337 (458)
T ss_pred             -------eeeccCccccCcCcccccCCCCCCcchhhhhcCceeeec
Confidence                   000122334688899999999999999999999996643

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.52  E-value=0.0028  Score=46.18  Aligned_cols=97  Identities=25%  Similarity=0.223  Sum_probs=67.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |..-|++||.. . .-++.+.|++++|.++.+-.++......+....+..+-...                         
T Consensus       290 ~~~~Y~~ke~~-~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-------------------------  342 (524)
T KOG0601|consen  290 GDCIYAAKELL-N-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-------------------------  342 (524)
T ss_pred             CCceEeChhhh-c-cccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc-------------------------
Confidence            34569999983 2 36778899999999999988886655433222222211100                         


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                        ...+.....+.+....+..|+..++..|++++.+++++++....
T Consensus       343 --ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~  386 (524)
T KOG0601|consen  343 --IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKL  386 (524)
T ss_pred             --CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchh
Confidence              11223344566677788999999999999999999999988543

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=95.95  E-value=0.0059  Score=44.76  Aligned_cols=90  Identities=18%  Similarity=0.195  Sum_probs=56.1

Q ss_pred             hhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCCchhHhhhcCCCchHHH
Q 048170           20 TPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVE   98 (142)
Q Consensus        20 ~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (142)
                      +++||||+|.++.++..|...+.... ......+.. ....+.....    ..            ..-.....+......
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k-~~~~d~~~~~----~a------------~e~~~~~~~d~~~~~  172 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLK-YYTDDQELLS----TA------------MEHLIQLLADKKRLP  172 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHH-hccCchhHHH----HH------------HHHHHHHhhhHhHHH
Confidence            68999999999999988865553221 122222221 1111110000    00            000122346777789


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           99 LLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        99 ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                      ++.+|+-..|..||...++.+++-|.++
T Consensus       173 ~~~~c~~~~~~ir~l~~~~~k~~i~~ev  200 (725)
T KOG1093|consen  173 LLKKCLWLEPIIRPLPMELSKRCSFTEV  200 (725)
T ss_pred             HhccCCccccccccchhHHhcCccHHHH
Confidence            9999999999999999999999988865

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=95.39  E-value=0.13  Score=35.44  Aligned_cols=42  Identities=10%  Similarity=0.026  Sum_probs=36.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG   44 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~   44 (142)
                      ||..|.++.. ......+..-|+||++-++.++..|..|+...
T Consensus       199 GT~ry~S~~~-H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~  240 (322)
T KOG1164|consen  199 GTLRYASINV-HLGIEQGRRDDLESLFYMLLELLKGSLPWEAL  240 (322)
T ss_pred             CccccccHHH-hCCCccCCchhhhhHHHHHHHHhcCCCCCccc
Confidence            7889999998 44558889999999999999999999998655

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=89.93  E-value=0.47  Score=34.55  Aligned_cols=43  Identities=12%  Similarity=0.160  Sum_probs=31.7

Q ss_pred             ccCcccchhhhc-C---CCCCChhhhHHHHHHHHHHHHhC-CCCcCCC
Q 048170            2 VEFPYKAPESRI-C---SSVYMTPHDVWAVGCIFAEMVSG-KPLFPCG   44 (142)
Q Consensus         2 ~t~~y~~PE~~~-~---~~~~~~~~Diws~g~~l~~l~~g-~~~~~~~   44 (142)
                      |...|.+||... +   ....+...|.+.+|+++|+++.| ..||.+.
T Consensus       178 g~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         178 GVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             CccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence            345689999732 1   22455678999999999999887 8898543

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=88.29  E-value=1.6  Score=30.76  Aligned_cols=56  Identities=16%  Similarity=0.133  Sum_probs=41.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGN   58 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~   58 (142)
                      ||-.||+--..++. +-+..-|+=++|-++...+-|..|+++-........++.++.
T Consensus       198 GTARYMSINTHlGr-EQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe  253 (449)
T KOG1165|consen  198 GTARYMSINTHLGR-EQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGE  253 (449)
T ss_pred             cceeeeEeeccccc-hhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcc
Confidence            66777776664443 667778999999999999999999998855544444544443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	142
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		3e-22
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		3e-22
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		3e-22
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		7e-19
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		8e-19
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-18
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-18
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-18
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		1e-18
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-18
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-18
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-18
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-18
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-18
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-18
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-18
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-18
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-18
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-18
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-18
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-18
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-18
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-18
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-18
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-18
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-18
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-18
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-18
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-18
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-18
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-18
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-18
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-18
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		1e-18
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-18
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-18
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-18
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-18
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		3e-18
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		3e-18
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		1e-17
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		3e-16
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-16
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		7e-16
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		8e-16
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		8e-16
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		8e-16
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		8e-16
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		8e-16
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		8e-16
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		8e-16
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		8e-16
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		9e-16
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		9e-16
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		9e-16
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		9e-16
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		9e-16
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		9e-16
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		9e-16
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		9e-16
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		9e-16
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		9e-16
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		9e-16
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		9e-16
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		9e-16
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		9e-16
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		9e-16
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		9e-16
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		9e-16
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		9e-16
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		9e-16
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		9e-16
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		9e-16
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		9e-16
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		9e-16
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		9e-16
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		9e-16
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		9e-16
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		9e-16
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		1e-15
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		1e-15
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		1e-15
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		1e-15
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		1e-15
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		1e-15
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		1e-15
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-15
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		1e-15
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		1e-15
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		1e-15
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		1e-15
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		1e-15
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		1e-15
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		1e-15
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-15
3hec_A	348	P38 In Complex With Imatinib Length = 348		1e-15
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-15
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		1e-15
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		1e-15
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-15
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-15
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-15
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-15
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		3e-15
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-15
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-15
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-15
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		5e-15
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-14
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		5e-14
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		5e-14
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		5e-14
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		5e-14
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		1e-13
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		1e-13
4exu_A	371	Mapk13, Inactive Form Length = 371		3e-13
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		3e-13
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		6e-13
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		4e-12
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		5e-12
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		5e-12
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		6e-12
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		6e-12
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-11
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		1e-11
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		1e-11
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		1e-11
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		1e-11
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		1e-11
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		1e-11
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		1e-11
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-11
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-11
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		1e-11
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		1e-11
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		1e-11
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-11
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		1e-11
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-11
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-11
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-11
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-11
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-11
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-11
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		2e-11
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-11
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		2e-11
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		2e-11
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		2e-11
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		2e-11
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		2e-11
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		3e-11
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		3e-11
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		5e-11
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		2e-10
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		4e-10
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		7e-09
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		7e-09
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		2e-08
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		2e-08
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		2e-08
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		2e-08
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		2e-08
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-08
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-08
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-08
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-08
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		2e-08
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-08
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-08
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-08
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-08
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		2e-08
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		2e-08
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		3e-08
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		3e-08
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		3e-08
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		4e-08
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		4e-08
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		4e-08
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		4e-08
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		4e-08
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		4e-08
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		4e-08
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-08
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		4e-08
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		4e-08
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		4e-08
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		4e-08
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-08
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		4e-08
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		4e-08
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		4e-08
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		5e-08
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		5e-08
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		5e-08
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		5e-08
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		3e-07
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		4e-07
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		5e-07
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		6e-07
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		6e-07
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		1e-06
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-06
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		1e-06
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		1e-06
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-06
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-06
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		2e-06
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		2e-06
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		3e-06
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		3e-06
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		3e-06
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		3e-06
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		4e-06
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		4e-06
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		4e-06
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		8e-06
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		9e-06
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		1e-05
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		1e-05
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		1e-05
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		1e-05
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		1e-05
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		1e-05
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		1e-05
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		1e-05
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		1e-05
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		1e-05
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		1e-05
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		1e-05
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		1e-05
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		1e-05
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		2e-05
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-05
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		2e-05
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-05
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		3e-05
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		3e-05
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		1e-04
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		1e-04
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		1e-04
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		1e-04
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		1e-04
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		1e-04
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		1e-04
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		1e-04
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		1e-04
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		1e-04
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		2e-04
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		2e-04
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		4e-04
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		4e-04
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		5e-04
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		5e-04
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		5e-04

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score =  100 bits (248), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
           Y+AP+  + S  Y T  D+W+VGCIFAEMV+G PLFP   + D L  I R+ G P  + W
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW 225
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P    + +   +    EP        GL+ SG++LLS+ML LDP+ R+TA  AL
Sbjct: 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score =  100 bits (248), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
           Y+AP+  + S  Y T  D+W+VGCIFAEMV+G PLFP   + D L  I R+ G P  + W
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNW 225
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P    + +   +    EP        GL+ SG++LLS+ML LDP+ R+TA  AL
Sbjct: 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score =  100 bits (248), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
           Y+AP+  + S  Y T  D+W+VGCIFAEMV+G PLFP   + D L  I R+ G P  + W
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW 225
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P    + +   +    EP        GL+ SG++LLS+ML LDP+ R+TA  AL
Sbjct: 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 89.4 bits (220), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 235
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 236 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 231 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 235
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 236 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 231 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 231 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 231 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 232
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 233 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  W
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 232
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           PG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL 
Sbjct: 233 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
           Y+AP+  + S  Y T  D+W++GCIFAEM++GKPLFP     D L  I  + G P    W
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW 244
Query: 65  PGANYISELLHSLPQC-EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P    +        Q  E    +    G    G++LLS MLC DP+ R++A DA+
Sbjct: 245 PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
           Y+AP+  + S  Y T  D+W++GCIFAEM++GKPLFP     D L  I  + G P    W
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW 244
Query: 65  PGANYISELLHSLPQC-EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P    +        Q  E    +    G    G++LLS MLC DP+ R++A DA+
Sbjct: 245 PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETW 64
           Y+ P+  + S+ Y T  D+W VGCIF EM +G+PLFP    ++ L  I R+ G PT+ETW
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETW 225
Query: 65  PGANYISEL-LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG     E   ++ P+     L      L+  G +LL+++L  +  +R++A DA+
Sbjct: 226 PGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAM 280

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  + +  Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 6/119 (5%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
           Y+AP+  + S  Y T  D+W+ GCI AEM++GKPLFP    ++ L LI  + G P +  W
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW 233
Query: 65  PGANYISELLHSLPQCEPADLAE--KTHGLEP---SGVELLSQMLCLDPDHRVTANDAL 118
           P    + +   ++ Q  P DL +  + H  EP   + ++ L  +L L+PD R++A  AL
Sbjct: 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQAL 292

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 254 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 119 C 119
Sbjct: 310 A 310

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 253 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 119 C 119
Sbjct: 309 A 309

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 253 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 119 C 119
Sbjct: 309 A 309

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 270
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 271 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 119 C 119
Sbjct: 327 A 327

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 255 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 119 C 119
Sbjct: 311 A 311

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 255 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 119 C 119
Sbjct: 311 A 311

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 253 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 119 C 119
Sbjct: 309 A 309

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 254 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 119 C 119
Sbjct: 310 A 310

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 258
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 259 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 119 C 119
Sbjct: 315 A 315

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 250 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 119 C 119
Sbjct: 306 A 306

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 255 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 119 C 119
Sbjct: 311 A 311

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 244 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 119 C 119
Sbjct: 300 A 300

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 250 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 119 C 119
Sbjct: 306 A 306

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 255 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 119 C 119
Sbjct: 311 A 311

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 258
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 259 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 119 C 119
Sbjct: 315 A 315

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 257
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 258 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 313
Query: 119 C 119
Sbjct: 314 A 314

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 244 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 119 C 119
Sbjct: 300 A 300

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 253 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 119 C 119
Sbjct: 309 A 309

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 246
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 247 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 302
Query: 119 C 119
Sbjct: 303 A 303

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 250 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 119 C 119
Sbjct: 306 A 306

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 259
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 260 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 119 C 119
Sbjct: 316 A 316

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 267
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 268 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 119 C 119
Sbjct: 324 A 324

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 259
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 260 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 119 C 119
Sbjct: 316 A 316

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 250 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 119 C 119
Sbjct: 306 A 306

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 244 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 119 C 119
Sbjct: 300 A 300

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 244
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 245 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 300
Query: 119 C 119
Sbjct: 301 A 301

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 259
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 260 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 119 C 119
Sbjct: 316 A 316

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 270
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 271 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 119 C 119
Sbjct: 327 A 327

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 266
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 267 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 119 C 119
Sbjct: 323 A 323

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 245
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 246 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 301
Query: 119 C 119
Sbjct: 302 A 302

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 244
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 245 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 300
Query: 119 C 119
Sbjct: 301 A 301

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 267
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 268 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 119 C 119
Sbjct: 324 A 324

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 244 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 119 C 119
Sbjct: 300 A 300

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 254 KKISSESARNYIQ----SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 119 C 119
Sbjct: 310 A 310

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 254 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 119 C 119
Sbjct: 310 A 310

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 267
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 268 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 119 C 119
Sbjct: 324 A 324

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E  
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 266
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI     SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 267 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 119 C 119
Sbjct: 323 A 323

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y    D+W+VGCI AE++ GK LFP     D L  I+ + G P+ E  
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL 253
Query: 65  P--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
               + +    + SLP     DL+    G  P  ++LL +ML LD D RV+A +AL 
Sbjct: 254 AKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALA 310

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y    D+W+VGCI AE++ GK LFP     D L  I+ + G P+ E  
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL 253
Query: 65  P--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
               + +    + SLP     DL+    G  P  ++LL +ML LD D RV+A +AL 
Sbjct: 254 AKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALA 310

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y    D+W+VGCI AE++ GK LFP     D L  I+ + G P+ E  
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL 245
Query: 65  P--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
               + +    + SLP     DL+    G  P  ++LL +ML LD D RV+A +AL 
Sbjct: 246 AKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALA 302

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           Y+APE  +  S Y TP D+W+VGCIFAEM   KPLF CG  + D L  I  L G P ++ 
Sbjct: 185 YRAPEV-LLQSTYATPVDMWSVGCIFAEMFRRKPLF-CGNSEADQLGKIFDLIGLPPEDD 242
Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WP    +S    + P   P  +      +E SG +LL +ML  +P  R++A  AL
Sbjct: 243 WP--RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 295

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           Y+APE  +  S Y TP D+W+VGCIFAEM   KPLF CG  + D L  I  L G P ++ 
Sbjct: 177 YRAPEV-LLQSTYATPVDMWSVGCIFAEMFRRKPLF-CGNSEADQLGKIFDLIGLPPEDD 234
Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WP    +S    + P   P  +      +E SG +LL +ML  +P  R++A  AL
Sbjct: 235 WP--RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 287

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           Y+APE  +  S Y TP D+W+VGCIFAEM   KPLF CG  + D L  I  L G P ++ 
Sbjct: 177 YRAPEV-LLQSTYATPVDMWSVGCIFAEMFRRKPLF-CGNSEADQLGKIFDLIGLPPEDD 234
Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WP    +S    + P   P  +      +E SG +LL +ML  +P  R++A  AL
Sbjct: 235 WP--RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 287

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           Y+APE  +  S Y TP D+W+VGCIFAEM   KPLF CG  + D L  I  L G P ++ 
Sbjct: 177 YRAPEV-LLQSTYATPVDMWSVGCIFAEMFRRKPLF-CGNSEADQLGKIFDLIGLPPEDD 234
Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WP    +S    + P   P  +      +E SG +LL +ML  +P  R++A  AL
Sbjct: 235 WP--RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 287

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 11/121 (9%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     + L  I+RL G P     
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVI 276
Query: 63  ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +    NYI+    SLPQ    + A+   G  P  V+LL +ML LD D R+TA++AL
Sbjct: 277 SRMPSHEARNYIN----SLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEAL 332
Query: 119 C 119
Sbjct: 333 A 333

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
           Y+APE  +    Y    D+W+VGCI AEM++GK LF      D L  I+++ G P  E  
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250
Query: 63  TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGT 122
               ++     +  LP+ E  D A       P  V LL +ML LD + RVTA +AL    
Sbjct: 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL---- 306
Query: 123 SEKLLAHAHLYVKTVH 138
                  AH Y +++H
Sbjct: 307 -------AHPYFESLH 315

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 7/118 (5%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE    ++ Y T  D+W+ GC+ AE++ G+PLFP     D L  I+++ G P++E  
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266
Query: 65  P--GANYISELLHSLPQCEPADLAEKTH-GLEPSGVELLSQMLCLDPDHRVTANDALC 119
                NY+    H  PQ  P   ++       P  ++L+S++L   P  R+TA +ALC
Sbjct: 267 KTMNPNYME---HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKET- 63
           Y+APE  + S+ Y    DVW+ GCI AE+   +P+FP     H L LI  + G P  +  
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 64  -----WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                 P A    E + SLP    A L +    + P G++LL +ML  DP  R+TA +AL
Sbjct: 248 LRCIESPRAR---EYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 119 CIGTSEKLLAHAHLYVKTVH 138
                       H Y++T H
Sbjct: 305 -----------EHPYLQTYH 313

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKET- 63
           Y+APE  + S+ Y    DVW+ GCI AE+   +P+FP     H L LI  + G P  +  
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 64  -----WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                 P A    E + SLP    A L +    + P G++LL +ML  DP  R+TA +AL
Sbjct: 248 LRCIESPRAR---EYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 119 CIGTSEKLLAHAHLYVKTVH 138
                       H Y++T H
Sbjct: 305 -----------EHPYLQTYH 313

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKET- 63
           Y+APE  + S+ Y    DVW+ GCI AE+   +P+FP     H L LI  + G P  +  
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 64  -----WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                 P A    E + SLP    A L +    + P G++LL +ML  DP  R+TA +AL
Sbjct: 248 LRCIESPRAR---EYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 119 CIGTSEKLLAHAHLYVKTVH 138
                       H Y++T H
Sbjct: 305 -----------EHPYLQTYH 313

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 271
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP       A+     +   ++LL +ML  +P+ R+T  +A
Sbjct: 272 LNCIINMKARNY----LQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEA 327
Query: 118 LC 119
           L 
Sbjct: 328 LA 329

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 16/122 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMV-SGKPLFPCGK-KDHLSLIVRLFGNPTKET 63
           Y+ P+    + +Y T  D+W+ GCIFAE+  +G+PLFP     D L  I RL G PT+E 
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQ 226
Query: 64  WPGANYISELLHSLPQCEP-------ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAND 116
           WP        +  LP  +P         L      L  +G +LL  +L  +P  R++A +
Sbjct: 227 WPS-------MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEE 279
Query: 117 AL 118
           AL
Sbjct: 280 AL 281

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE  +    Y    D+W+VGCI AEM++GK LF  GK   D L+ I+++ G P  E 
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK-GKDYLDQLTQILKVTGVPGTEF 265
Query: 64  WPGAN--YISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
               N       + SLPQ    D  +      P   +LL +ML LD D R+TA  AL 
Sbjct: 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE  +    Y    D+W+VGCI AEM++GK LF  GK   D L+ I+++ G P  E 
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK-GKDYLDQLTQILKVTGVPGTEF 247
Query: 64  WPGAN--YISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
               N       + SLPQ    D  +      P   +LL +ML LD D R+TA  AL 
Sbjct: 248 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 16/122 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMV-SGKPLFPCGK-KDHLSLIVRLFGNPTKET 63
           Y+ P+    + +Y T  D+W+ GCIFAE+  + +PLFP     D L  I RL G PT+E 
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQ 226
Query: 64  WPGANYISELLHSLPQCEP-------ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAND 116
           WP        +  LP  +P         L      L  +G +LL  +L  +P  R++A +
Sbjct: 227 WPS-------MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEE 279
Query: 117 AL 118
           AL
Sbjct: 280 AL 281

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETW 64
           Y+APE  +    Y    D+W+VGCIF EM++ + LFP     H L LI+ + G P+    
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287
Query: 65  P--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
              GA  +   + SLP  +P        G +   + LL +ML  +P  R++A  AL
Sbjct: 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAAL 343

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + SS Y TP D+W+VGCIFAEM   KPLF      D L  I+ + G P +E W
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P    +          +P  + +    ++  G +LL + L  +P  R++A  AL
Sbjct: 244 PRDVALPRQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + SS Y TP D+W+VGCIFAEM   KPLF      D L  I+ + G P +E W
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P    +          +P  + +    ++  G +LL + L  +P  R++A  AL
Sbjct: 244 PRDVALPRQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETW 64
           Y+APE  +    Y    D+W+VGCIF EM++ + LFP     H L LI+ + G P+    
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 288
Query: 65  P--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
              GA  +   + SLP  +P        G +   + LL +ML  +P  R++A  AL
Sbjct: 289 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAAL 344

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + SS Y TP D+W+VGCIFAEM   KPLF      D L  I+ + G P +E W
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P    +          +P  + +    ++  G +LL + L  +P  R++A  AL
Sbjct: 244 PRDVALPRQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 253
Query: 64  WP-GANYISE-LLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
              G N  +   L SLP              +   ++LL +ML  +P  R+    AL 
Sbjct: 254 LNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 251
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 252 LNXIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 118 LC 119
           L 
Sbjct: 308 LA 309

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 251
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 252 LNXIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 118 LC 119
           L 
Sbjct: 308 LA 309

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 251
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 252 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 118 LC 119
           L 
Sbjct: 308 LA 309

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 255
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 256 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 118 LC 119
           L 
Sbjct: 312 LA 313

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 255
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 256 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 118 LC 119
           L 
Sbjct: 312 LA 313

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 251
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 252 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 118 LC 119
           L 
Sbjct: 308 LA 309

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 249
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 250 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 305
Query: 118 LC 119
           L 
Sbjct: 306 LA 307

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 253
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 254 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 118 LC 119
           L 
Sbjct: 310 LA 311

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 253
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 254 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 118 LC 119
           L 
Sbjct: 310 LA 311

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 271
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 272 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 327
Query: 118 LC 119
           L 
Sbjct: 328 LA 329

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 255
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 256 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 118 LC 119
           L 
Sbjct: 312 LA 313

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 255
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 256 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 118 LC 119
           L 
Sbjct: 312 LA 313

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 271
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 272 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 327
Query: 118 LC 119
           L 
Sbjct: 328 LA 329

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 256
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 257 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 312
Query: 118 LC 119
           L 
Sbjct: 313 LA 314

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 256
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 257 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 312
Query: 118 LC 119
           L 
Sbjct: 313 LA 314

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 257
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 258 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 313
Query: 118 LC 119
           L 
Sbjct: 314 LA 315

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 248
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 249 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 304
Query: 118 LC 119
           L 
Sbjct: 305 LA 306

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 255
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 256 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 118 LC 119
           L 
Sbjct: 312 LA 313

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 259
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 260 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 315
Query: 118 LC 119
           L 
Sbjct: 316 LA 317

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 251
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 252 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 118 LC 119
           L 
Sbjct: 308 LA 309

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 2   VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPT 60
           V   Y+ PE  +    Y  P D+W  GCI AEM +  P+     + H L+LI +L G+ T
Sbjct: 190 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249
Query: 61  KETWPGA-NYISELLHSLP----QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
            E WP   NY  EL   L     Q        K +  +P  ++L+ ++L LDP  R+ ++
Sbjct: 250 PEVWPNVDNY--ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 307
Query: 116 DAL 118
           DAL
Sbjct: 308 DAL 310

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 2   VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPT 60
           V   Y+ PE  +    Y  P D+W  GCI AEM +  P+     + H L+LI +L G+ T
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 61  KETWPGA-NYISELLHSLP----QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
            E WP   NY  EL   L     Q        K +  +P  ++L+ ++L LDP  R+ ++
Sbjct: 251 PEVWPNVDNY--ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 308
Query: 116 DAL 118
           DAL
Sbjct: 309 DAL 311

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 255
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 256 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 118 LC 119
           L 
Sbjct: 312 LA 313

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 2   VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPT 60
           V   Y+ PE  +    Y  P D+W  GCI AEM +  P+     + H L+LI +L G+ T
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 61  KETWPGA-NYISELLHSLP----QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
            E WP   NY  EL   L     Q        K +  +P  ++L+ ++L LDP  R+ ++
Sbjct: 251 PEVWPNVDNY--ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 308
Query: 116 DAL 118
           DAL
Sbjct: 309 DAL 311

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETW 64
           Y+ PE  +    Y  P D+W  GCI AEM +  P+     + H L+LI +L G+ T E W
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 65  PGA-NYISELLHSLP----QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P   NY  EL   L     Q        K +  +P  ++L+ ++L LDP  R+ ++DAL
Sbjct: 255 PNVDNY--ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 311

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  + ++ Y    D+W++GC+F E++ GKPLF      D L  I+++ G PTKE  
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQM 266
Query: 65  PGAN-YISELLHSLPQCEPADLAEKTHGLEPS-GVELLSQMLCLDPDHRVTANDALC 119
              N + +E+    P  +  D  +      PS  ++LL Q+L  +PD R+   +A+ 
Sbjct: 267 IRMNPHYTEV--RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+ PE  + S  Y T  D+W++ CI+AEM+   PLFP   + D L  I  + G P   TW
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262
Query: 65  PGANYISELLHSLPQCEPADLAEKTHG-LEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG   + +   S P+     L       L+  G++LL+ ML +DP  R++A +AL
Sbjct: 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNAL 317

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P +E 
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPEQED 249
Query: 63  -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                     NY    L SLP              +   ++LL +ML  +P  R+    A
Sbjct: 250 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 305
Query: 118 LC 119
           L 
Sbjct: 306 LA 307

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 34/148 (22%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVS-----------GKPLFPC----------- 43
           Y+APE  +    Y    DVW++GCIFAE+++             PLFP            
Sbjct: 249 YRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQK 308
Query: 44  ----------GKKDHLSLIVRLFGNPTKETWPG--ANYISELLHSLPQCEPADLAEKTHG 91
                     G +D L++I  + G P++E             +   P+ E  DLAE+   
Sbjct: 309 AGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368
Query: 92  LEPSGVELLSQMLCLDPDHRVTANDALC 119
                + LL +ML  +P+ R+T N+ L 
Sbjct: 369 SSADAIHLLKRMLVFNPNKRITINECLA 396

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 21/137 (15%)
Query: 2   VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK----------DHLSL 51
           V F Y+APE  + +  Y    D+WA+GCIFAE+++ +P+F C ++          D L  
Sbjct: 197 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256
Query: 52  IVRLFGNPTKETWPGANYISE--------LLHSLPQCEPADLAEKTHGLEPS--GVELLS 101
           I  + G P  + W     + E          ++   C      EK H ++P      LL 
Sbjct: 257 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEK-HKVKPDSKAFHLLQ 315
Query: 102 QMLCLDPDHRVTANDAL 118
           ++L +DP  R+T+  A+
Sbjct: 316 KLLTMDPIKRITSEQAM 332

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 31/144 (21%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK-----------PLFP---C-------- 43
           Y+APE  +    Y    D+W+ GCIFAE+++             PLFP   C        
Sbjct: 217 YRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRN 276
Query: 44  -------GKKDHLSLIVRLFGNPTKETWPGANY--ISELLHSLPQCEPADLAEKTHGLEP 94
                    +D L++I  + G PT++     N   + + +   P  +P +L +K   +  
Sbjct: 277 SKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISD 336
Query: 95  SGVELLSQMLCLDPDHRVTANDAL 118
            G+ LL  ML  +P+ R+T + AL
Sbjct: 337 DGINLLESMLKFNPNKRITIDQAL 360

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 19/132 (14%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
           Y+APE  + S+ Y    D+W++GCI  E++ GKP+FP     + L  I+ +   P+ E  
Sbjct: 196 YRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDV 255
Query: 63  ---TWPGANYISELLH---SLPQCEPADLAEKTHGL----------EPSGVELLSQMLCL 106
                P A  + E L     + Q    D+  K   L              ++LL ++L  
Sbjct: 256 ESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF 315
Query: 107 DPDHRVTANDAL 118
           +P+ R++ANDAL
Sbjct: 316 NPNKRISANDAL 327

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPT--- 60
           Y++PE  +  + Y  P DVWA+GC+FAE++SG PL+P GK   D L LI +  G+     
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWP-GKSDVDQLYLIRKTLGDLIPRH 226
Query: 61  KETWPGANYISELLHSLPQ-CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           ++ +    Y S +    P+  EP +L  K   +    + LL   L +DP  R+T    L
Sbjct: 227 QQVFSTNQYFSGVKIPDPEDMEPLEL--KFPNISYPALGLLKGCLHMDPTERLTCEQLL 283

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE    +  Y T  D+W+VGCIFAEM+ G+P+F        L  IVR+ G P++E  
Sbjct: 197 YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVL 256
Query: 65  PGAN---YISELLHSLPQCEPADLAEKTHGLEPS--GVELLSQMLCLDPDHRVTANDALC 119
              N      +L +S  +  P       H L+ +    +LLS +L   P+ R+   +ALC
Sbjct: 257 RKLNPSHTDVDLYNS--KGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 248
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 309 RISVDDAL 316

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 248
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 309 RISVDDAL 316

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 248
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 309 RISVDDAL 316

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 248
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 309 RISVDDAL 316

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 184 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 241
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 301
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 302 RISVDDAL 309

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 248
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 309 RISVDDAL 316

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE    + +Y    D+WAVGCI AE++   P  P     D L+ I    G PT+E W
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQW 237
Query: 65  PGA----NYISELLHSLPQCEPADLAEKTHGLEPSG---VELLSQMLCLDPDHRVTANDA 117
           P      +Y++    S P           H    +G   ++L+  +   +P  R+TA  A
Sbjct: 238 PDMCSLPDYVT--FKSFPGI------PLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 289
Query: 118 L 118
           L
Sbjct: 290 L 290

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 192 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 249
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 250 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 309
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 310 RISVDDAL 317

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 192 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 249
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 250 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 309
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 310 RISVDDAL 317

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 190 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 247
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 248 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 307
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 308 RISVDDAL 315

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 184 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 241
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 301
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 302 RISVDDAL 309

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 248
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 309 RISVDDAL 316

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 185 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 242
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 243 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 302
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 303 RISVDDAL 310

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 185 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 242
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 243 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 302
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 303 RISVDDAL 310

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 229 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 286
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 287 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 346
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 347 RISVDDAL 354

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 229 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 286
Query: 60  TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+         + P+  P  L  A+  H  L+ S   +LLS+ML +DP  
Sbjct: 287 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 346
Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 347 RISVDDAL 354

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 42/163 (25%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK-----------PLFP---C-------- 43
           Y+APE  +    Y    D+W+ GCIFAE+++             PLFP   C        
Sbjct: 222 YRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHN 281
Query: 44  -------GKKDHLSLIVRLFGNPTKETWP--GANYISELLHSLPQCEPADLAEKTHGLEP 94
                    +D L++I  + G P +E         + + +   P  +  DL++K   +  
Sbjct: 282 SKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDLSKKYSSISK 341
Query: 95  SGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTV 137
            G++LL  ML  +   R+T + AL           +H Y+K V
Sbjct: 342 EGIDLLESMLRFNAQKRITIDKAL-----------SHPYLKDV 373

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E  
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 65  P--GANYISELLHSLPQCEPADLAEKTH-GLEPSGVELLSQMLCLDPDHRVTANDA 117
                NY      + PQ +     +       P  + L S++L   P  R+T  +A
Sbjct: 248 REMNPNYTE---FAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 250

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 273

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 283

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 257

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 264

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 258

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 281

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E  
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 65  P--GANYISELLHSLPQCEPADLAEKTH-GLEPSGVELLSQMLCLDPDHRVTANDA 117
                NY      + PQ +     +       P  + L S++L   P  R+T  +A
Sbjct: 248 REMNPNYTE---FAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 253

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 257

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 249

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 246

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 324

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y++P   +  + Y    D+WA GCIFAEM++GK LF    + + + LI+       +E  
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDR 249
Query: 65  PGANYISELLHSLPQCEPADLAEKTH-------GLEPSGVELLSQMLCLDPDHRVTANDA 117
                  ELL  +P     D+ E          G+    V+ L Q+L   P  R+TA +A
Sbjct: 250 ------QELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303
Query: 118 LC 119
           L 
Sbjct: 304 LS 305

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 15/127 (11%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
           Y+APE  I    Y    D+W+VGCI  E+V G  +F      D  + ++   G P+ E  
Sbjct: 189 YRAPEV-ILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 247
Query: 65  PG-----ANYISE--------LLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHR 111
                   NY+               P       +E+         +LLS+ML +DPD R
Sbjct: 248 AALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKR 307
Query: 112 VTANDAL 118
           ++ ++AL
Sbjct: 308 ISVDEAL 314

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE  I  + Y  P D+W++GCI AE+++G PL P   + D L+ ++ L G P+++
Sbjct: 265 YRAPEV-ILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQK 321

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 15/127 (11%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
           Y+APE  I    Y    D+W+VGCI  E+V G  +F      D  + ++   G P+ E  
Sbjct: 191 YRAPEV-ILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFM 249
Query: 65  PG-----ANYIS--------ELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHR 111
                   NY+         +     P       +E+         +LLS+ML +DPD R
Sbjct: 250 AALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKR 309
Query: 112 VTANDAL 118
           ++ ++AL
Sbjct: 310 ISVDEAL 316

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGN--PTKE 62
           Y+APE  +    Y    DVWA+GC+  EM  G+PLFP     D L  I+   GN  P  +
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQ 249
Query: 63  TWPGAN--YISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHR 111
                N  +    L  + + EP  L  +   L    ++L  + L +DPD R
Sbjct: 250 ELFNKNPVFAGVRLPEIKEREP--LERRYPKLSEVVIDLAKKCLHIDPDKR 298

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
           Y+APE  I  + Y  P D+W++GCI AE+++G PL P   + D L+ ++ L G P ++
Sbjct: 265 YRAPEV-ILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQK 321

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRLFGNPTKE 62
           Y+APE  I  + Y  P D+W++GCI AE+++G PL P   + D L+ ++ L G P+++
Sbjct: 265 YRAPEV-ILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQK 321

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  I    Y    D+W+VGCI  EM+ G  LFP     D  + ++   G P+ E  
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 65  PGAN-YISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLCLDPDH 110
                 +   + + P+               PAD +E          +LLS+ML +D   
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
           R++ ++AL
Sbjct: 309 RISVDEAL 316

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  I    Y    D+W+VGCI  EM+ G  LFP     D  + ++   G P+ E  
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 65  PGAN-YISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLCLDPDH 110
                 +   + + P+               PAD +E          +LLS+ML +D   
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
           R++ ++AL
Sbjct: 309 RISVDEAL 316

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  I    Y    D+W+VGCI  EM+ G  LFP     D  + ++   G P+ E  
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 65  PGAN-YISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLCLDPDH 110
                 +   + + P+               PAD +E          +LLS+ML +D   
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
           R++ ++AL
Sbjct: 309 RISVDEAL 316

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  I    Y    D+W+VGCI  EM+ G  LFP     D  + ++   G P+ E  
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 65  PGAN-YISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLCLDPDH 110
                 +   + + P+               PAD +E          +LLS+ML +D   
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
           R++ ++AL
Sbjct: 309 RISVDEAL 316

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y+APE  I    Y    D+W+VGCI  EM+ G  LFP     D  + ++   G P+ E  
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 65  PGAN-YISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLCLDPDH 110
                 +   + + P+               PAD +E          +LLS+ML +D   
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
           R++ ++AL
Sbjct: 309 RISVDEAL 316

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    +    D+W+ GC+ AEM + K LF      + L+ IV + G P  E  
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDV 258
Query: 63  ---TWPGA-NYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
              + P A +Y+   L ++P      +       +P  ++L+++ML  +P  R++   AL
Sbjct: 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTA---DPVALDLIAKMLEFNPQRRISTEQAL 315

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKE-- 62
           Y+APE  +    +    D+W+ GC+ AEM + K LF      + L+ IV + G P  E  
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDV 258
Query: 63  ---TWPGA-NYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
              + P A +Y+   L ++P      +       +P  ++L+++ML  +P  R++   AL
Sbjct: 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTA---DPVALDLIAKMLEFNPQRRISTEQAL 315

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIV--------RLFG 57
           +K PE  +   +Y    D+W++GC+ A M+  +  F  G+ ++  L+          L+G
Sbjct: 203 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYG 262
Query: 58  NPTKETWPGANYISELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
              K       + +++L  HS  + E    +E  H + P  ++LL ++L  D   R+TA 
Sbjct: 263 YLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK 322
Query: 116 DAL 118
           +A+
Sbjct: 323 EAM 325

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  +  F  G+   D L  I ++ G      
Sbjct: 198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYG 257
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +    +I      +++L  HS  + E    +E  H + P  ++LL ++L  D   R+TA 
Sbjct: 258 YLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK 317
Query: 116 DAL 118
           +A+
Sbjct: 318 EAM 320

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVCHKILFP-GRDYIDQWNKVIEQLGTPCPAF 248
Query: 60  TKETWPGA-NYISEL----LHSLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P   NY+        +S  +  P  L  A+  H  L+ S   +LLS+ML +D   
Sbjct: 249 MKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
           R++ ++AL
Sbjct: 309 RISVDEAL 316

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNP----T 60
           Y+APE  I    Y    D+W+VGCI  EM+ G  LFP     D  + ++   G P     
Sbjct: 193 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 251
Query: 61  KETWPG-----------ANYISELLHSLPQC-EPADLAEKTHGLEPSGVELLSQMLCLDP 108
           K+  P            A Y  E L   P    PAD +E          +LLS+ML +D 
Sbjct: 252 KKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPAD-SEHNKLKASQARDLLSKMLVIDA 308
Query: 109 DHRVTANDAL 118
             R++ ++AL
Sbjct: 309 SKRISVDEAL 318

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNP----T 60
           Y+APE  I    Y    D+W+VGCI  EM+ G  LFP     D  + ++   G P     
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249
Query: 61  KETWPGANYISELL-----HSLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDHR 111
           K+  P      E       +S  +  P  L  A+  H  L+ S   +LLS+ML +D   R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 112 VTANDAL 118
           ++ ++AL
Sbjct: 310 ISVDEAL 316

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNP----T 60
           Y+APE  I    Y    D+W+VGCI  EM+ G  LFP     D  + ++   G P     
Sbjct: 192 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 250
Query: 61  KETWPGANYISELL-----HSLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDHR 111
           K+  P      E       +S  +  P  L  A+  H  L+ S   +LLS+ML +D   R
Sbjct: 251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 310
Query: 112 VTANDAL 118
           ++ ++AL
Sbjct: 311 ISVDEAL 317

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNP----T 60
           Y+APE  I    Y    D+W+VGCI  EM+ G  LFP     D  + ++   G P     
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249
Query: 61  KETWPGANYISELL-----HSLPQCEPADL--AEKTH-GLEPSGV-ELLSQMLCLDPDHR 111
           K+  P      E       +S  +  P  L  A+  H  L+ S   +LLS+ML +D   R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKR 309
Query: 112 VTANDAL 118
           ++ ++AL
Sbjct: 310 ISVDEAL 316

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
           Y+APE  I    Y    D+W+VG I  EM+ G  LFP     D  + ++   G P+ E  
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 65  PGAN-YISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLCLDPDH 110
                 +   + + P+               PAD +E          +LLS+ML +D   
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
           R++ ++AL
Sbjct: 309 RISVDEAL 316

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
           Y+APE  I    Y    D+W+VG I  EM+ G  LFP     D  + ++   G P+ E  
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 65  PGAN-YISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLCLDPDH 110
                 +   + + P+               PAD +E          +LLS+ML +D   
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
           R++ ++AL
Sbjct: 309 RISVDEAL 316

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
           +A+
Sbjct: 317 EAM 319

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 195 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 254
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 255 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 314
Query: 116 DAL 118
           +A+
Sbjct: 315 EAM 317

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
           +A+
Sbjct: 317 EAM 319

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
           +A+
Sbjct: 317 EAM 319

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
           +A+
Sbjct: 317 EAM 319

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 255
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 256 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 315
Query: 116 DAL 118
           +A+
Sbjct: 316 EAM 318

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 255
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 256 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 315
Query: 116 DAL 118
           +A+
Sbjct: 316 EAM 318

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
           +A+
Sbjct: 317 EAM 319

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
           +A+
Sbjct: 317 EAM 319

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
           +A+
Sbjct: 317 EAM 319

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
           +A+
Sbjct: 317 EAM 319

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
           +A+
Sbjct: 317 EAM 319

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
           +A+
Sbjct: 317 EAM 319

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 202 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 261
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 262 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 321
Query: 116 DAL 118
           +A+
Sbjct: 322 EAM 324

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 191 YRAPEV-ILGMGYKENVDLWSVGCIMGEMVCHKILFP-GRDYIDQWNKVIEQLGTPCPEF 248
Query: 60  TKETWPGANYISELL-----HSLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P      E       +S  +  P  L  A+  H  L+ S   +LLS+ML +D   
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
           R++ ++AL
Sbjct: 309 RISVDEAL 316

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 185 YRAPEV-ILGMGYKENVDLWSVGCIMGEMVCHKILFP-GRDYIDQWNKVIEQLGTPCPEF 242
Query: 60  TKETWPGANYISELL-----HSLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
            K+  P      E       +S  +  P  L  A+  H  L+ S   +LLS+ML +D   
Sbjct: 243 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 302
Query: 111 RVTANDAL 118
           R++ ++AL
Sbjct: 303 RISVDEAL 310

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64  WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      +++L  HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
           +A+
Sbjct: 317 EAM 319

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P    
Sbjct: 196 YRAPEV-ILGMGYKENVDLWSVGCIMGEMVCHKILFP-GRDYIDQWNKVIEQLGTPCPEF 253
Query: 60  TKETWPG-----------ANYISELLHSLPQC-EPADLAEKTHGLEPSGVELLSQMLCLD 107
            K+  P            A Y  E L   P    PAD +E          +LLS+ML +D
Sbjct: 254 MKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPAD-SEHNKLKASQARDLLSKMLVID 310
Query: 108 PDHRVTANDAL 118
              R++ ++AL
Sbjct: 311 ASKRISVDEAL 321

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRLFG------- 57
           Y+APE  I +  +  P DVW++GCI  E   G  +FP    K+HL+++ R+ G       
Sbjct: 200 YRAPEV-ILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMI 258
Query: 58  -NPTKETWPGANYISELLHSLP------QCEPADLAEKTHGLEPSGV-ELLSQMLCLDPD 109
               K  +   + +    HS         C+P      +  +E   + +L+ +ML  DP 
Sbjct: 259 QKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318
Query: 110 HRVTANDAL 118
            R+T  +AL
Sbjct: 319 KRITLREAL 327

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRLFG------- 57
           Y+APE  I +  +  P DVW++GCI  E   G  +FP    K+HL+++ R+ G       
Sbjct: 200 YRAPEV-ILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMI 258
Query: 58  -NPTKETWPGANYISELLHSLP------QCEPADLAEKTHGLEPSGV-ELLSQMLCLDPD 109
               K  +   + +    HS         C+P      +  +E   + +L+ +ML  DP 
Sbjct: 259 QKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318
Query: 110 HRVTANDAL 118
            R+T  +AL
Sbjct: 319 KRITLREAL 327

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
           +K PE  +    Y    D+W++GC+FA M+  K  F  G  +H  L  I ++ G      
Sbjct: 192 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 251
Query: 64  WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      E L   HS         A+  H + P  ++ L ++L  D   R+TA 
Sbjct: 252 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 311
Query: 116 DALC 119
           +A+ 
Sbjct: 312 EAMT 315

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
           +K PE  +    Y    D+W++GC+FA M+  K  F  G  +H  L  I ++ G      
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 64  WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      E L   HS         A+  H + P  ++ L ++L  D   R+TA 
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 116 DALC 119
           +A+ 
Sbjct: 311 EAMT 314

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
           +K PE  +    Y    D+W++GC+FA M+  K  F  G  +H  L  I ++ G      
Sbjct: 192 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 251
Query: 64  WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      E L   HS         A+  H + P  ++ L ++L  D   R+TA 
Sbjct: 252 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 311
Query: 116 DALC 119
           +A+ 
Sbjct: 312 EAMT 315

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
           +K PE  +    Y    D+W++GC+FA M+  K  F  G  +H  L  I ++ G      
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 64  WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      E L   HS         A+  H + P  ++ L ++L  D   R+TA 
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 116 DALC 119
           +A+ 
Sbjct: 311 EAMT 314

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
           +K PE  +    Y    D+W++GC+FA M+  K  F  G  +H  L  I ++ G      
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 64  WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      E L   HS         A+  H + P  ++ L ++L  D   R+TA 
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 116 DALC 119
           +A+ 
Sbjct: 311 EAMT 314

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
           +K PE  +    Y    D+W++GC+FA M+  K  F  G  +H  L  I ++ G      
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 64  WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      E L   HS         A+  H + P  ++ L ++L  D   R+TA 
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 116 DALC 119
           +A+ 
Sbjct: 311 EAMT 314

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
           +K PE  +    Y    D+W++GC+FA M+  K  F  G  +H  L  I ++ G      
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 64  WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      E L   HS         A+  H + P  ++ L ++L  D   R+TA 
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 116 DALC 119
           +A+ 
Sbjct: 311 EAMT 314

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
           +K PE  +    Y    D+W++GC+FA M+  K  F  G  +H  L  I ++ G      
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 64  WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      E L   HS         A+  H + P  ++ L ++L  D   R+TA 
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 116 DALC 119
           +A+ 
Sbjct: 311 EAMT 314

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
           +K PE  +    Y    D+W++GC+FA M+  K  F  G  +H  L  I ++ G      
Sbjct: 212 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNA 271
Query: 64  WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      E L   HS         A+  H + P  ++ L ++L  D   R+TA 
Sbjct: 272 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 331
Query: 116 DALC 119
           +A+ 
Sbjct: 332 EAMT 335

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
           +K PE  +    Y    D+W++GC+FA M+  K  F  G  +H  L  I ++ G      
Sbjct: 193 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 252
Query: 64  WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I      E L   HS         A+  H + P  ++ L ++L  D   R+TA 
Sbjct: 253 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 312
Query: 116 DALC 119
           +A+ 
Sbjct: 313 EAMT 316

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-------CGKKDHLSLIVRLFGN 58
           Y++ E  I S  Y TP D+W+  C+  E+ +G  LF           +DH++LI+ L G 
Sbjct: 243 YRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK 301
Query: 59  PTKETWPGANYISEL------LHSLPQCEPADLAE------KTHGLEPSG-VELLSQMLC 105
             ++      Y  E       L  + + +P  L E      +    E +G  + L  ML 
Sbjct: 302 VPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLE 361
Query: 106 LDPDHRVTANDAL 118
           L P+ R TA + L
Sbjct: 362 LIPEKRATAAECL 374

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-------CGKKDHLSLIVRLFGN 58
           Y++ E  I S  Y TP D+W+  C+  E+ +G  LF           +DH++LI+ L G 
Sbjct: 259 YRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK 317
Query: 59  PTKETWPGANYISEL------LHSLPQCEPADLAE------KTHGLEPSG-VELLSQMLC 105
             ++      Y  E       L  + + +P  L E      +    E +G  + L  ML 
Sbjct: 318 VPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLE 377
Query: 106 LDPDHRVTANDAL 118
           L P+ R TA + L
Sbjct: 378 LIPEKRATAAECL 390

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 5   PY-KAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKET 63
           PY  APE  I  S+Y T  D+W++G +  EMV G+P  P      +  + RL  +P    
Sbjct: 205 PYWMAPEV-ISRSLYATEVDIWSLGIMVIEMVDGEP--PYFSDSPVQAMKRLRDSP---- 257
Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                             P  L + +H + P   + L +ML  DP  R TA + L
Sbjct: 258 ------------------PPKL-KNSHKVSPVLRDFLERMLVRDPQERATAQELL 293

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 27/134 (20%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRLFG-NPTK-- 61
           Y+APE  I    +  P DVW++GCI  E   G  LF     ++HL+++ R+ G  P++  
Sbjct: 219 YRAPEV-ILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMI 277
Query: 62  -----------------ETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQML 104
                            E      Y+ E    L +   ++ AE+ H L     +L+  ML
Sbjct: 278 RKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSE-AEEHHQL----FDLIESML 332
Query: 105 CLDPDHRVTANDAL 118
             +P  R+T  +AL
Sbjct: 333 EYEPAKRLTLGEAL 346

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y++PE  +    Y    D+W++GCI  EM +G+PLF    + D ++ IV + G P     
Sbjct: 205 YRSPEV-LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL 263
Query: 65  PGANYISELLHSLP 78
             A    +    LP
Sbjct: 264 DQAPKARKFFEKLP 277

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y++PE  +    Y    D+W++GCI  EM +G+PLF    + D ++ IV + G P     
Sbjct: 224 YRSPEV-LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL 282
Query: 65  PGANYISELLHSLP 78
             A    +    LP
Sbjct: 283 DQAPKARKFFEKLP 296

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
           Y++PE  +    Y    D+W++GCI  EM +G+PLF    + D ++ IV + G P     
Sbjct: 224 YRSPEV-LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL 282
Query: 65  PGANYISELLHSLP 78
             A    +    LP
Sbjct: 283 DQAPKARKFFEKLP 296

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	142
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-37
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	7e-37
3niz_A	311	Rhodanese family protein; structural genomics, str	4e-36
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	5e-36
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	8e-36
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-35
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-35
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-35
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-35
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-34
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-34
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-34
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-33
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-33
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-32
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	6e-32
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	7e-32
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	7e-32
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	7e-32
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-31
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	3e-31
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	4e-31
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-30
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	5e-30
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	7e-30
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-29
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	5e-29
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-27
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-27
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	4e-27
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	5e-27
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-17
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-16
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	7e-16
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	8e-16
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-15
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-14
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	6e-14
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-09
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-09
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	8e-09
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-08
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-08
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-07
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-07
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-07
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-07
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-07
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-07
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-06
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-06
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-06
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-06
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-05
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	6e-05
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	8e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-04
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-04
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	3e-04
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	8e-04

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  127 bits (322), Expect = 2e-37
 Identities = 50/115 (43%), Positives = 67/115 (58%), Gaps = 3/115 (2%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+AP+  + S  Y T  D+W+VGCIFAEMV+G PLFP G    D L  I R+ G P  + 
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFP-GVSEADQLMRIFRILGTPNSKN 224

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WP    + +   +    EP        GL+ SG++LLS+ML LDP+ R+TA  AL
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  125 bits (316), Expect = 4e-36
 Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 10/119 (8%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+AP+  + S  Y T  D+W++GCIFAEM++GKPLFP G    D L  I  + G P    
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP-GVTDDDQLPKIFSILGTPNPRE 243

Query: 64  WPGANYISEL----LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WP    + EL      +    E    +    G    G++LLS MLC DP+ R++A DA+
Sbjct: 244 WPQ---VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  124 bits (314), Expect = 5e-36
 Identities = 46/120 (38%), Positives = 59/120 (49%), Gaps = 16/120 (13%)

Query: 6   YKAPE----SRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNP 59
           Y+APE    S      Y TP D+W+VGCIFAEM   KPLF  G    D L  I  L G P
Sbjct: 185 YRAPEVLLQST-----YATPVDMWSVGCIFAEMFRRKPLFC-GNSEADQLGKIFDLIGLP 238

Query: 60  TKETWPGANYISEL-LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
            ++ WP       L   + P   P  +      +E SG +LL +ML  +P  R++A  AL
Sbjct: 239 PEDDWPR---DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 295

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  124 bits (314), Expect = 8e-36
 Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 10/119 (8%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+ P+  + S+ Y T  D+W VGCIF EM +G+PLFP G   ++ L  I R+ G PT+ET
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFP-GSTVEEQLHFIFRILGTPTEET 224

Query: 64  WPGANYISEL----LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WPG   I        ++ P+     L      L+  G +LL+++L  +  +R++A DA+
Sbjct: 225 WPG---ILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAM 280

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  124 bits (313), Expect = 2e-35
 Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 8/117 (6%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+APE    + +Y    D+WAVGCI AE++   P  P G    D L+ I    G PT+E 
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLP-GDSDLDQLTRIFETLGTPTEEQ 236

Query: 64  WPGANYISEL--LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WP    +  L    +        L           ++L+  +   +P  R+TA  AL
Sbjct: 237 WPD---MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 290

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  123 bits (311), Expect = 2e-35
 Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+APE  +    Y    DVWA+GC+  EM  G+PLFP G    D L  I+   GN     
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFP-GDSDIDQLYHIMMCLGNLIPRH 248

Query: 64  WPGANYISEL----LHSLPQCEPA-DLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                  ++        LP+ +    L  +   L    ++L  + L +DPD R    + L
Sbjct: 249 QEL---FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  123 bits (310), Expect = 3e-35
 Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 8/120 (6%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+AP+  + S  Y T  D+W+ GCI AEM++GKPLFP G   ++ L LI  + G P +  
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFP-GTNDEEQLKLIFDIMGTPNESL 232

Query: 64  WPGANYISELLHSLPQCEPADLAEK-----THGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WP    + +   ++ Q  P DL +         L+ + ++ L  +L L+PD R++A  AL
Sbjct: 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQAL 292

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  123 bits (310), Expect = 3e-35
 Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 16/120 (13%)

Query: 6   YKAPE----SRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNP 59
           Y+APE    S      Y TP D+W+VGCIFAEM   KPLF  G    D L  I+ + G P
Sbjct: 185 YRAPEVLLQSS-----YATPVDLWSVGCIFAEMFRRKPLFR-GSSDVDQLGKILDVIGLP 238

Query: 60  TKETWPGANYISEL-LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
            +E WP       L   +        + +    ++  G +LL + L  +P  R++A  AL
Sbjct: 239 GEEDWPR---DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  121 bits (305), Expect = 2e-34
 Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 4/116 (3%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+ PE  + S  Y T  D+W++ CI+AEM+   PLFP G    D L  I  + G P   T
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFP-GDSEIDQLFKIFEVLGLPDDTT 261

Query: 64  WPGANYISELLHSLPQCEPADLAEK-THGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WPG   + +   S P+     L       L+  G++LL+ ML +DP  R++A +AL
Sbjct: 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNAL 317

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  120 bits (303), Expect = 2e-34
 Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 11/120 (9%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y++PE  +  + Y  P DVWA+GC+FAE++SG PL+P GK   D L LI +  G+     
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWP-GKSDVDQLYLIRKTLGDLIPRH 226

Query: 64  WPGANYISELLH----SLPQCEPA-DLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                  S   +     +P  E    L  K   +    + LL   L +DP  R+T    L
Sbjct: 227 QQV---FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLL 283

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  122 bits (307), Expect = 2e-34
 Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE    ++ Y T  D+W+ GC+ AE++ G+PLFP G+   D L  I+++ G P++E 
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFP-GESGIDQLVEIIKVLGTPSREQ 265

Query: 64  WPG--ANYISELLHSLPQCEPADLAEK-THGLEPSGVELLSQMLCLDPDHRVTANDALC 119
                 NY+    H  PQ  P   ++       P  ++L+S++L   P  R+TA +ALC
Sbjct: 266 IKTMNPNYME---HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  118 bits (297), Expect = 1e-33
 Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 10/119 (8%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGK--KDHLSLIVRLFGNPTKE 62
           Y+ P+    + +Y T  D+W+ GCIFAE+ + G+PLFP G    D L  I RL G PT+E
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP-GNDVDDQLKRIFRLLGTPTEE 225

Query: 63  TWPGANYISEL--LHSLPQ-CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
            WP    +++L      P       L      L  +G +LL  +L  +P  R++A +AL
Sbjct: 226 QWPS---MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  119 bits (300), Expect = 3e-33
 Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 9/119 (7%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP G    D L  I+++ G PT+E 
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-GDSGVDQLVEIIKVLGTPTREQ 280

Query: 64  WPG--ANYISELLHSLPQCEPADLAEKTH-GLEPSGVELLSQMLCLDPDHRVTANDALC 119
                 NY        PQ +     +       P  + L S++L   P  R+T  +A  
Sbjct: 281 IREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  115 bits (291), Expect = 3e-32
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 12/121 (9%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+ PE  +    Y  P D+W  GCI AEM +  P+   G   +  L+LI +L G+ T E 
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ-GNTEQHQLALISQLCGSITPEV 252

Query: 64  WPGANYISEL----LHSLPQCEPADLAE--KTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
           WP    +          L + +   + +  K +  +P  ++L+ ++L LDP  R+ ++DA
Sbjct: 253 WPN---VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 309

Query: 118 L 118
           L
Sbjct: 310 L 310

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  115 bits (289), Expect = 6e-32
 Identities = 45/137 (32%), Positives = 62/137 (45%), Gaps = 16/137 (11%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+APE  +    Y    D+W+VGCI AEM++GK LF  GK   D L+ I+++ G P  E 
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK-GKDYLDQLTQILKVTGVPGTEF 247

Query: 64  WP--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIG 121
                       + SLPQ    D  +      P   +LL +ML LD D R+TA  AL   
Sbjct: 248 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL--- 304

Query: 122 TSEKLLAHAHLYVKTVH 138
                    H + +   
Sbjct: 305 --------THPFFEPFR 313

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  114 bits (287), Expect = 7e-32
 Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 23/140 (16%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y++P   +  + Y    D+WA GCIFAEM++GK LF  G    + + LI+       +E 
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFA-GAHELEQMQLILESIPVVHEED 248

Query: 64  W-----PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                     YI     +        L +   G+    V+ L Q+L   P  R+TA +AL
Sbjct: 249 RQELLSVIPVYIR----NDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEAL 304

Query: 119 CIGTSEKLLAHAHLYVKTVH 138
                      +H Y+    
Sbjct: 305 -----------SHPYMSIYS 313

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  115 bits (289), Expect = 7e-32
 Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 16/137 (11%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP GK   D L+ I+ + G+P++E 
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 255

Query: 64  WP--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIG 121
                       L SLP              +   ++LL +ML  +P  R+    AL   
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL--- 312

Query: 122 TSEKLLAHAHLYVKTVH 138
                   AH Y++  +
Sbjct: 313 --------AHPYLEQYY 321

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  115 bits (289), Expect = 7e-32
 Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 16/137 (11%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+APE  +    Y    D+W+VGCI AEM++GK LF  G    D L  I+++ G P  E 
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK-GSDHLDQLKEIMKVTGTPPAEF 249

Query: 64  WP--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIG 121
                ++     +  LP+ E  D A       P  V LL +ML LD + RVTA +AL   
Sbjct: 250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL--- 306

Query: 122 TSEKLLAHAHLYVKTVH 138
                   AH Y +++H
Sbjct: 307 --------AHPYFESLH 315

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  113 bits (286), Expect = 2e-31
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 23/141 (16%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+APE  +    +    D+W+ GC+ AEM + K LF  G    + L+ IV + G P  E 
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR-GSTFYNQLNKIVEVVGTPKIED 257

Query: 64  W-----PGA-NYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                 P A +Y+    +SL               +P  ++L+++ML  +P  R++   A
Sbjct: 258 VVMFSSPSARDYL---RNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314

Query: 118 LCIGTSEKLLAHAHLYVKTVH 138
           L            H Y +++ 
Sbjct: 315 L-----------RHPYFESLF 324

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  113 bits (285), Expect = 3e-31
 Identities = 50/137 (36%), Positives = 65/137 (47%), Gaps = 16/137 (11%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+APE  +    Y    D+W+VGCI AE+++G+ LFP G    D L LI+RL G P  E 
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP-GTDHIDQLKLILRLVGTPGAEL 253

Query: 64  WP--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIG 121
                +      + SL Q    + A    G  P  V+LL +ML LD D R+TA  AL   
Sbjct: 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL--- 310

Query: 122 TSEKLLAHAHLYVKTVH 138
                   AH Y    H
Sbjct: 311 --------AHAYFAQYH 319

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  112 bits (283), Expect = 4e-31
 Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 17/138 (12%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+APE  + S+ Y    DVW+ GCI AE+   +P+FP G+  +  L LI  + G P  + 
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP-GRDYRHQLLLIFGIIGTPHSDN 246

Query: 64  WPGA---NYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI 120
                      E + SLP    A L +    + P G++LL +ML  DP  R+TA +AL  
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL-- 304

Query: 121 GTSEKLLAHAHLYVKTVH 138
                     H Y++T H
Sbjct: 305 ---------EHPYLQTYH 313

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  111 bits (280), Expect = 2e-30
 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE  + ++ Y    D+W++GC+F E++ GKPLF  G+   D L  I+++ G PTKE 
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFS-GETSIDQLVRIIQIMGTPTKEQ 265

Query: 64  WPG--ANYISELLHSLPQCEPADLAEKTHGLEPS-GVELLSQMLCLDPDHRVTANDALC 119
                 +Y        P  +  D  +      PS  ++LL Q+L  +PD R+   +A+ 
Sbjct: 266 MIRMNPHYTE---VRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  110 bits (276), Expect = 5e-30
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 12/122 (9%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
           Y+APE    +  Y T  D+W+VGCIFAEM+ G+P+F  G      L  IVR+ G P++E 
Sbjct: 197 YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR-GDNSAGQLHEIVRVLGCPSREV 255

Query: 64  WP--GANYISELLHSLPQCEPAD----LAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
                 ++       L   +        ++ +        +LLS +L   P+ R+   +A
Sbjct: 256 LRKLNPSHTD---VDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEA 312

Query: 118 LC 119
           LC
Sbjct: 313 LC 314

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  109 bits (274), Expect = 7e-30
 Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 23/144 (15%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK-PLFPCGK--KDHLSLIVRLFGNPTKE 62
           +K PE  +   +Y    D+W++GC+ A M+  K P F  G    D L  I ++ G     
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQLVRIAKVLGTEDLY 254

Query: 63  TWP---GANYISELLHSLPQCEPADL-----AEKTHGLEPSGVELLSQMLCLDPDHRVTA 114
            +               L +           +E  H + P  ++ L ++L  D   R+TA
Sbjct: 255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 314

Query: 115 NDALCIGTSEKLLAHAHLYVKTVH 138
            +A+            H Y  TV 
Sbjct: 315 REAM-----------EHPYFYTVV 327

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  110 bits (276), Expect = 1e-29
 Identities = 44/167 (26%), Positives = 67/167 (40%), Gaps = 45/167 (26%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVS-----------GKPLFP------------ 42
           Y+APE  +    Y    DVW++GCIFAE+++             PLFP            
Sbjct: 249 YRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQK 308

Query: 43  ---------CGKKDHLSLIVRLFGNPTKETWP--GANYISELLHSLPQCEPADLAEKTHG 91
                     G +D L++I  + G P++E             +   P+ E  DLAE+   
Sbjct: 309 AGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368

Query: 92  LEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTVH 138
                + LL +ML  +P+ R+T N+ L           AH + K V 
Sbjct: 369 SSADAIHLLKRMLVFNPNKRITINECL-----------AHPFFKEVR 404

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  108 bits (271), Expect = 5e-29
 Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 19/132 (14%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC----------GKKDHLSLIVRL 55
           Y+APE  + +  Y    D+WA+GCIFAE+++ +P+F C             D L  I  +
Sbjct: 201 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV 260

Query: 56  FGNPTKETWPGANYISELLHSLPQ---------CEPADLAEKTHGLEPSGVELLSQMLCL 106
            G P  + W     + E    +                + +     +     LL ++L +
Sbjct: 261 MGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTM 320

Query: 107 DPDHRVTANDAL 118
           DP  R+T+  A+
Sbjct: 321 DPIKRITSEQAM 332

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  104 bits (261), Expect = 2e-27
 Identities = 38/148 (25%), Positives = 58/148 (39%), Gaps = 28/148 (18%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+APE  I    Y    D+W+VGCI  EMV  K LFP G+   D  + ++   G P  E 
Sbjct: 229 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 286

Query: 64  WPGAN-YISELLHSLPQCEPADLAEK------------THGLEPSGVELLSQMLCLDPDH 110
                  +   + + P+       +                      +LLS+ML +DP  
Sbjct: 287 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 346

Query: 111 RVTANDALCIGTSEKLLAHAHLYVKTVH 138
           R++ +DAL            H Y+   +
Sbjct: 347 RISVDDAL-----------QHPYINVWY 363

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  103 bits (259), Expect = 2e-27
 Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 32/153 (20%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+APE  + S+ Y    D+W++GCI  E++ GKP+FP G    + L  I+ +   P+ E 
Sbjct: 196 YRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP-GSSTMNQLERIIGVIDFPSNED 254

Query: 64  WP--GANYISELLHSLPQCEPADLAEKTHGLE----------------PSGVELLSQMLC 105
                + +   ++ SL +      + K                        ++LL ++L 
Sbjct: 255 VESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ 314

Query: 106 LDPDHRVTANDALCIGTSEKLLAHAHLYVKTVH 138
            +P+ R++ANDAL            H +V   H
Sbjct: 315 FNPNKRISANDAL-----------KHPFVSIFH 336

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  102 bits (256), Expect = 4e-27
 Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 28/148 (18%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           Y+APE  I    Y    D+W+VGCI  EM+ G  LFP G    D  + ++   G P  E 
Sbjct: 192 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFP-GTDHIDQWNKVIEQLGTPCPEF 249

Query: 64  WPGAN-YISELLHSLPQCEPADLAEKTHG------------LEPSGVELLSQMLCLDPDH 110
                  +   + + P+       +                      +LLS+ML +D   
Sbjct: 250 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 309

Query: 111 RVTANDALCIGTSEKLLAHAHLYVKTVH 138
           R++ ++AL            H Y+   +
Sbjct: 310 RISVDEAL-----------QHPYINVWY 326

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  102 bits (257), Expect = 5e-27
 Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 42/164 (25%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSG-----------KPLFP------------ 42
           Y+APE  +    Y    D+W+ GCIFAE+++             PLFP            
Sbjct: 217 YRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRN 276

Query: 43  ---CGKKDH---LSLIVRLFGNPTKETWP--GANYISELLHSLPQCEPADLAEKTHGLEP 94
                +K +   L++I  + G PT++         + + +   P  +P +L +K   +  
Sbjct: 277 SKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISD 336

Query: 95  SGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTVH 138
            G+ LL  ML  +P+ R+T + AL            H Y+K V 
Sbjct: 337 DGINLLESMLKFNPNKRITIDQAL-----------DHPYLKDVR 369

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 74.7 bits (184), Expect = 6e-17
 Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 45/145 (31%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-------KDHLSLIVRLFGN 58
           Y++PE  +  + +    D+W+  C+  E+++G  LF   +        DH++ I+ L G 
Sbjct: 201 YRSPEV-LLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGE 259

Query: 59  PTKE-------------------------TWPGANYISELLHSLPQCEPADLAEKTHGLE 93
                                         WP  + ++E      + E  ++        
Sbjct: 260 LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYK-FSKDEAKEI-------- 310

Query: 94  PSGVELLSQMLCLDPDHRVTANDAL 118
               + LS ML LDP  R  A   +
Sbjct: 311 ---SDFLSPMLQLDPRKRADAGGLV 332

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 74.0 bits (182), Expect = 1e-16
 Identities = 38/145 (26%), Positives = 55/145 (37%), Gaps = 34/145 (23%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNP---- 59
           Y+APE  I  + Y  P D+W++GCI AE+++G PL P G+   D L+ ++ L G P    
Sbjct: 265 YRAPEV-ILGARYGMPIDMWSLGCILAELLTGYPLLP-GEDEGDQLACMIELLGMPSQKL 322

Query: 60  --------------------TKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVE- 98
                               T  T    + +     S           +  G    G + 
Sbjct: 323 LDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDD 382

Query: 99  -----LLSQMLCLDPDHRVTANDAL 118
                 L Q L  DP  R+T   AL
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQAL 407

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 71.6 bits (176), Expect = 7e-16
 Identities = 28/137 (20%), Positives = 51/137 (37%), Gaps = 31/137 (22%)

Query: 6   YKAPESRICSSV-----YMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGN 58
           Y+APE      V     +    D+W+ GC+ AE+ +G  LF       +HL+++  +   
Sbjct: 225 YRAPE------VILNLGWDVSSDMWSFGCVLAELYTGSLLFR-THEHMEHLAMMESIIQP 277

Query: 59  PTKE------TWPGANYISELLHSLPQCEPADLAEKTHGLEPSG-----------VELLS 101
             K          G+ Y+++    L   E A        ++               + L 
Sbjct: 278 IPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLY 337

Query: 102 QMLCLDPDHRVTANDAL 118
            +L +DP  R +  + L
Sbjct: 338 SILQIDPTLRPSPAELL 354

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 71.5 bits (176), Expect = 8e-16
 Identities = 36/140 (25%), Positives = 55/140 (39%), Gaps = 39/140 (27%)

Query: 6   YKAPESRICSSV-----YMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGN 58
           Y+APE      V     +  P DVW++GCI  E   G  +FP     K+HL+++ R+ G 
Sbjct: 200 YRAPE------VILALGWSQPCDVWSIGCILIEYYLGFTVFP-THDSKEHLAMMERILGP 252

Query: 59  PTKE----------------TWPGAN----YISELLHSLPQCEPADLAEKTHGLEPSGVE 98
             K                  W   +    Y+S     L +   +   E          +
Sbjct: 253 LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER-----LFD 307

Query: 99  LLSQMLCLDPDHRVTANDAL 118
           L+ +ML  DP  R+T  +AL
Sbjct: 308 LIQKMLEYDPAKRITLREAL 327

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 70.0 bits (172), Expect = 3e-15
 Identities = 33/135 (24%), Positives = 50/135 (37%), Gaps = 29/135 (21%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKE- 62
           Y+ PE  I    +  P DVW++GCI  E   G  LF      ++HL ++ ++ G      
Sbjct: 205 YRPPEV-ILELGWAQPCDVWSIGCILFEYYRGFTLFQ-THENREHLVMMEKILGPIPSHM 262

Query: 63  ---------------TWPGAN----YISELLHSLPQCEPADLAEKTHGLEPSGVELLSQM 103
                           W   +    Y+ E    L      D  E          +L+ +M
Sbjct: 263 IHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLF-----DLMRRM 317

Query: 104 LCLDPDHRVTANDAL 118
           L  DP  R+T  +AL
Sbjct: 318 LEFDPAQRITLAEAL 332

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 68.2 bits (167), Expect = 1e-14
 Identities = 35/150 (23%), Positives = 53/150 (35%), Gaps = 39/150 (26%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKE- 62
           Y++PE  +    Y    D+W++GCI  EM +G+PLF  G    D ++ IV + G P    
Sbjct: 224 YRSPEV-LLGMPYDLAIDMWSLGCILVEMHTGEPLFS-GANEVDQMNKIVEVLGIPPAHI 281

Query: 63  -------------------------------TWPGANYISELLHS---LPQCEPADLAEK 88
                                            PG   +  +L      P    A  +  
Sbjct: 282 LDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGH 341

Query: 89  THGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           T        +L+ +ML  DP  R+    AL
Sbjct: 342 TVADYLKFKDLILRMLDYDPKTRIQPYYAL 371

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 66.5 bits (162), Expect = 6e-14
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-------GKKDHLSLIVRLFG 57
            Y++ E  I S  Y TP D+W+  C+  E+ +G  LF           +DH++LI+ L G
Sbjct: 258 QYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLG 316

Query: 58  NPTKETWPGANYISEL---------LHSLPQCEPADLAEKTHGLEPSGVE----LLSQML 104
              ++      Y  E          +  L      ++  + +             L  ML
Sbjct: 317 KVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPML 376

Query: 105 CLDPDHRVTANDAL 118
            L P+ R TA + L
Sbjct: 377 ELIPEKRATAAECL 390

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 54.3 bits (130), Expect = 1e-09
 Identities = 18/116 (15%), Positives = 29/116 (25%), Gaps = 24/116 (20%)

Query: 6   YKAPESRICSSVYMTP-HDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLF-GNPTKET 63
           Y   E    S+   T   + W +G     +      F            R     P  ++
Sbjct: 257 YAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDS 316

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGV-ELLSQMLCLDPDHRVTANDAL 118
                           C P           P  V  L+ + L  D   R+   +A+
Sbjct: 317 LA-----------FGSCTPL----------PDFVKTLIGRFLNFDRRRRLLPLEAM 351

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 52.3 bits (126), Expect = 4e-09
 Identities = 22/123 (17%), Positives = 37/123 (30%), Gaps = 35/123 (28%)

Query: 6   YKAPE----------SRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRL 55
           Y  PE          +    S      DVW++GCI   M  GK  F     + +S +  +
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-QIINQISKLHAI 252

Query: 56  FGNPTKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
                +  +P  +                             ++L   L  DP  R++  
Sbjct: 253 IDPNHEIEFP--DIPE----------------------KDLQDVLKCCLKRDPKQRISIP 288

Query: 116 DAL 118
           + L
Sbjct: 289 ELL 291

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 51.6 bits (124), Expect = 8e-09
 Identities = 22/123 (17%), Positives = 37/123 (30%), Gaps = 35/123 (28%)

Query: 6   YKAPE----------SRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRL 55
           Y  PE          +    S      DVW++GCI   M  GK  F     + +S +  +
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-QIINQISKLHAI 233

Query: 56  FGNPTKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
                +  +P  +                             ++L   L  DP  R++  
Sbjct: 234 IDPNHEIEFP--DIPE----------------------KDLQDVLKCCLKRDPKQRISIP 269

Query: 116 DAL 118
           + L
Sbjct: 270 ELL 272

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 51.0 bits (122), Expect = 1e-08
 Identities = 22/123 (17%), Positives = 37/123 (30%), Gaps = 35/123 (28%)

Query: 6   YKAPE----------SRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRL 55
           Y  PE          +    S      DVW++GCI   M  GK  F     + +S +  +
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-QIINQISKLHAI 280

Query: 56  FGNPTKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
                +  +P  +                             ++L   L  DP  R++  
Sbjct: 281 IDPNHEIEFP--DIPE----------------------KDLQDVLKCCLKRDPKQRISIP 316

Query: 116 DAL 118
           + L
Sbjct: 317 ELL 319

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 27/116 (23%)

Query: 6   YKAPESRICSSV-YMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
           Y +PE        Y    D+W++GC+  EM + +  F   K +  SL  ++         
Sbjct: 202 YMSPE--RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP-L 258

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI 120
           P  +Y  EL                        +L++  +  DP+ R        +
Sbjct: 259 PSDHYSEEL-----------------------RQLVNMCINPDPEKRPDVTYVYDV 291

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 50.2 bits (120), Expect = 2e-08
 Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 28/116 (24%)

Query: 6   YKAPE--SRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKE 62
           + APE  S  C        D+++ GC+F  ++S G   F                     
Sbjct: 192 WIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF--------------------- 230

Query: 63  TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
              G +   +    L  C    L  + H  +    EL+ +M+ +DP  R +A   L
Sbjct: 231 ---GKSLQRQANILLGACSLDCLHPEKH-EDVIARELIEKMIAMDPQKRPSAKHVL 282

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 49.3 bits (118), Expect = 6e-08
 Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 30/116 (25%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH--LSLIVRLFGNPTKET 63
           Y APE  +    Y    DVW++G I   +++G P F  G+ D   L  + +         
Sbjct: 204 YIAPE--VLRKKYDEKCDVWSIGVILFILLAGYPPF-GGQTDQEILRKVEKGKYTFDSPE 260

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           W     +SE                         +L+ QML  D   R++A  AL 
Sbjct: 261 WKN---VSE----------------------GAKDLIKQMLQFDSQRRISAQQALE 291

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 32/115 (27%)

Query: 6   YKAPESRICSSV-YMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVR-LFGNPTKET 63
           Y +PE    + + Y    D+W++GC+  E+ +  P F         L  +   G   +  
Sbjct: 182 YMSPE--QMNRMSYNEKSDIWSLGCLLYELCALMPPF--TAFSQKELAGKIREGKFRR-- 235

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                        +P     +L            E++++ML L   HR +  + L
Sbjct: 236 -------------IPYRYSDEL-----------NEIITRMLNLKDYHRPSVEEIL 266

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 47.9 bits (114), Expect = 2e-07
 Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 28/119 (23%)

Query: 6   YKAPE------SRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNP 59
           ++APE      +           D++++GC+F  ++S        K    S I+R   + 
Sbjct: 198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL 257

Query: 60  TKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
            +        +                           +L+SQM+  DP  R TA   L
Sbjct: 258 DEMKCLHDRSLI----------------------AEATDLISQMIDHDPLKRPTAMKVL 294

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 47.4 bits (113), Expect = 2e-07
 Identities = 18/124 (14%), Positives = 34/124 (27%), Gaps = 12/124 (9%)

Query: 5   PYKAPE--SRICSSVYMTPH-----DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFG 57
            Y  P+   R               D+W++G  F    +G   F   +         +  
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP--RRNKEVMY 237

Query: 58  NPTKETWPGANYISELLHSLPQCEPADLAEKTH---GLEPSGVELLSQMLCLDPDHRVTA 114
                   GA    +   + P     D+        GL+     +L+ +L  D +     
Sbjct: 238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGF 297

Query: 115 NDAL 118
           +   
Sbjct: 298 DQFF 301

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 25/113 (22%), Positives = 35/113 (30%), Gaps = 31/113 (27%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
           Y APE  +    Y T  DV+++G    E+     L   G+        +L        + 
Sbjct: 222 YMAPE--LLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQ-----QLRQGYLPPEFT 274

Query: 66  GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +S  L S                      +L  ML  DP  R TA   L
Sbjct: 275 --AGLSSELRS----------------------VLVMMLEPDPKLRATAEALL 303

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 47.4 bits (113), Expect = 2e-07
 Identities = 31/118 (26%), Positives = 45/118 (38%), Gaps = 34/118 (28%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH--LSLIVRLFGNPT--K 61
           Y APE  +    Y    DVW+ G I   ++SG P F  G  ++  L  + +  G  T   
Sbjct: 194 YIAPE--VLHGTYDEKCDVWSTGVILYILLSGCPPF-NGANEYDILKKVEK--GKYTFEL 248

Query: 62  ETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
             W     +SE                      S  +L+ +ML   P  R++A DAL 
Sbjct: 249 PQWKK---VSE----------------------SAKDLIRKMLTYVPSMRISARDALD 281

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 47.4 bits (113), Expect = 3e-07
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 30/114 (26%)

Query: 6   YKAPESRICSSV-YMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
           Y +PE  IC +  Y    D+WA+GC+  E+ + K  F        +L++++       ++
Sbjct: 191 YLSPE--ICENKPYNNKSDIWALGCVLYELCTLKHAF--EAGSMKNLVLKI----ISGSF 242

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P           +      DL             L+SQ+   +P  R + N  L
Sbjct: 243 P----------PVSLHYSYDLR-----------SLVSQLFKRNPRDRPSVNSIL 275

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 47.4 bits (113), Expect = 3e-07
 Identities = 29/118 (24%), Positives = 40/118 (33%), Gaps = 34/118 (28%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH--LSLIVRLFGNPT--K 61
           Y APE  +    Y    DVW+ G I   ++ G P F  G+ D   +  + +  G      
Sbjct: 214 YIAPE--VLKKKYNEKCDVWSCGVIMYILLCGYPPF-GGQNDQDIIKKVEK--GKYYFDF 268

Query: 62  ETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
             W     IS                          EL+  ML  D + R TA +AL 
Sbjct: 269 NDWKN---IS----------------------DEAKELIKLMLTYDYNKRCTAEEALN 301

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 21/127 (16%), Positives = 37/127 (29%), Gaps = 39/127 (30%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
           + A E    +  ++   D++A+          +PL   G                     
Sbjct: 196 FLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG--------------------- 234

Query: 66  GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK 125
                 +  H + Q     +      L     ELL  M+  DP+ R +A           
Sbjct: 235 ------DQWHEIRQGRLPRI---PQVLSQEFTELLKVMIHPDPERRPSAMA--------- 276

Query: 126 LLAHAHL 132
           L+ H+ L
Sbjct: 277 LVKHSVL 283

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 29/116 (25%), Positives = 40/116 (34%), Gaps = 30/116 (25%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPT--KET 63
           Y APE  +    Y    DVW+ G I   ++SG P F  GK ++  L     G        
Sbjct: 189 YIAPE--VLRGTYDEKCDVWSAGVILYILLSGTPPF-YGKNEYDILKRVETGKYAFDLPQ 245

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           W     IS+                         +L+ +ML   P  R+TA   L 
Sbjct: 246 WRT---ISD----------------------DAKDLIRKMLTFHPSLRITATQCLE 276

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 45.2 bits (107), Expect = 1e-06
 Identities = 18/124 (14%), Positives = 34/124 (27%), Gaps = 12/124 (9%)

Query: 5   PYKAPE--SRICSSVYMTPH-----DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFG 57
            Y  P+   R               D+W++G  F    +G   F   +         +  
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP--RRNKEVMY 237

Query: 58  NPTKETWPGANYISELLHSLPQCEPADLAEKTH---GLEPSGVELLSQMLCLDPDHRVTA 114
                   GA    +   + P     D+        GL+     +L+ +L  D +     
Sbjct: 238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGF 297

Query: 115 NDAL 118
           +   
Sbjct: 298 DQFF 301

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 33/119 (27%)

Query: 6   YKAPES-RICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH--LSLIVRLFGNPT-- 60
           + APE     +  Y    D W+ G +   ++ G   FP G  D   +S ++         
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFP-GVNDADTISQVLN--KKLCFE 296

Query: 61  KETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
              +     +S                          +LLS +L  + D R  A  AL 
Sbjct: 297 NPNYNV---LSP----------------------LARDLLSNLLNRNVDERFDAMRALQ 330

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 43.5 bits (103), Expect = 5e-06
 Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 36/118 (30%)

Query: 6   YKAPESRICSSVYMTPH-----DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPT 60
           Y A E  +      T H     D++++G IF EM+   P     ++ ++   +R   +  
Sbjct: 196 YVATE--VLDG---TGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRS-VSIE 247

Query: 61  KETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                  N +                           +++  ++  DP+ R  A   L
Sbjct: 248 FPPDFDDNKMKVE-----------------------KKIIRLLIDHDPNKRPGARTLL 282

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 16/117 (13%), Positives = 33/117 (28%), Gaps = 38/117 (32%)

Query: 6   YKAPESRICSSVYMTPH----DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTK 61
           Y +PE           +    D++++G I  E+     L+P   +      +    +   
Sbjct: 196 YMSPE--QIHG---NSYSHKVDIFSLGLILFEL-----LYPFSTQMERVRTLT---DVRN 242

Query: 62  ETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
             +P           L   +                 ++  ML   P  R  A + +
Sbjct: 243 LKFP----------PLFTQKYPCEYV-----------MVQDMLSPSPMERPEAINII 278

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 27/120 (22%), Positives = 44/120 (36%), Gaps = 35/120 (29%)

Query: 5   PYKAPESRICS----SVYMTPHDVWAVGCIFAEMVSGKPLF--PCGKKDHLSLIVRLFGN 58
            Y+APE  + S     V     DVW++GC+   M+ G+  +     K D ++L V+    
Sbjct: 208 SYRAPE--LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ---- 261

Query: 59  PTKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
             + + P +   S  L                        LL+ M+ +DP  R      L
Sbjct: 262 -NQLSIPQSPRHSSALWQ----------------------LLNSMMTVDPHQRPHIPLLL 298

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 40.9 bits (96), Expect = 5e-05
 Identities = 22/130 (16%), Positives = 38/130 (29%), Gaps = 35/130 (26%)

Query: 8   APESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGA 67
           APE  +         D+W+  C+   M++G    P                     W   
Sbjct: 224 APEV-VMGKPCDAKVDIWSSCCMMLHMLNGCH--P---------------------WTQY 259

Query: 68  NYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL 127
                 L  +   EP  + E      P   + + + L  +P HR +A          +L 
Sbjct: 260 FRGPLCLK-IAS-EPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASA---------MELR 308

Query: 128 AHAHLYVKTV 137
                 ++ V
Sbjct: 309 RKVGKALQEV 318

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 40.7 bits (96), Expect = 5e-05
 Identities = 19/114 (16%), Positives = 32/114 (28%), Gaps = 35/114 (30%)

Query: 6   YKAPESRICSSV-YMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
           Y +PE    SS  Y    D++A+G I AE++           +       L         
Sbjct: 187 YMSPE--QISSQDYGKEVDLYALGLILAELLHVCDTAF----ETSKFFTDLRDGI----- 235

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                       +                     LL ++L   P+ R   ++ L
Sbjct: 236 ------------ISDIFDKKEK-----------TLLQKLLSKKPEDRPNTSEIL 266

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 40.4 bits (95), Expect = 6e-05
 Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 30/116 (25%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPT--KET 63
           + APE  +    Y  P DVW  G I   ++SG   F   K+     I++  G        
Sbjct: 199 FMAPEV-VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK--GKYKMNPRQ 255

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           W     ISE                      S  +L+ +ML LDP  R+T  +AL 
Sbjct: 256 WSH---ISE----------------------SAKDLVRRMLMLDPAERITVYEALN 286

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 40.0 bits (94), Expect = 8e-05
 Identities = 23/122 (18%), Positives = 36/122 (29%), Gaps = 36/122 (29%)

Query: 8   APESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGA 67
           APE  +    Y    DV+A G    EM + +   P  +  + + I R   +  K      
Sbjct: 198 APE--MYEEKYDESVDVYAFGMCMLEMATSEY--PYSECQNAAQIYRRVTSGVK------ 247

Query: 68  NYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL 127
                     P               P   E++   +  + D R +  D         LL
Sbjct: 248 ----------PASFD-------KVAIPEVKEIIEGCIRQNKDERYSIKD---------LL 281

Query: 128 AH 129
            H
Sbjct: 282 NH 283

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 39.1 bits (91), Expect = 2e-04
 Identities = 16/117 (13%), Positives = 33/117 (28%), Gaps = 38/117 (32%)

Query: 6   YKAPESRICSSVYMTPH----DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTK 61
           Y +PE           +    D++++G I  E+     L+                    
Sbjct: 242 YMSPE--QIHG---NNYSHKVDIFSLGLILFEL-----LYSF------------------ 273

Query: 62  ETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                      ++  +   +   L  + +   P    ++  ML   P  R  A D +
Sbjct: 274 ---STQMERVRIITDVRNLKFPLLFTQKY---PQEHMMVQDMLSPSPTERPEATDII 324

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 38.2 bits (89), Expect = 3e-04
 Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 17/118 (14%)

Query: 6   YKAPESRICSS--VYMTPH-DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKE 62
           +  PE    S+   Y     D+W++G     M      F          +V LF N   +
Sbjct: 216 FMPPE--FFSNESSYNGAKVDIWSLGICLYVMFYNVVPF-----SLKISLVELFNNIRTK 268

Query: 63  --TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
              +P      +  H L            + L    ++ L   L  +P  R+T+ DAL
Sbjct: 269 NIEYP-----LDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDAL 321

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 38.3 bits (88), Expect = 3e-04
 Identities = 20/111 (18%), Positives = 34/111 (30%), Gaps = 15/111 (13%)

Query: 18  YMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW----PGAN----- 68
           Y           +F ++   + LF  G  D+   I RL        W    P +N     
Sbjct: 226 YTLSRLERDGIVVFCDVSMDEDLFT-GDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLH 284

Query: 69  YISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
           Y+++ +      +          ++    E    ML        +A D LC
Sbjct: 285 YLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLC 330

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 37.5 bits (87), Expect = 8e-04
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 33/118 (27%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH--LSLIVRLFGNPT--K 61
           + APE            D+W+VG +   ++SG   F  G+ D   L  +     +     
Sbjct: 322 FAAPEV-AEGKPVGYYTDMWSVGVLSYILLSGLSPF-GGENDDETLRNVKS--CDWNMDD 377

Query: 62  ETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
             + G   ISE                       G + + ++L  DP+ R+T + AL 
Sbjct: 378 SAFSG---ISE----------------------DGKDFIRKLLLADPNTRMTIHQALE 410

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	142
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.97
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.95
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.95
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.94
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.94
3niz_A	311	Rhodanese family protein; structural genomics, str	99.94
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.94
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.94
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.93
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.93
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.93
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.93
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.92
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.92
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.92
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.92
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.92
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.92
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.92
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.92
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.92
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.92
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.91
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.91
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.91
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.91
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.91
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.91
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.9
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.9
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.9
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.9
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.9
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.9
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.9
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.9
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.9
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.89
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.89
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.89
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.89
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.88
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.88
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.88
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.88
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.88
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.88
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.87
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.87
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.87
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.87
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.87
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.87
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.87
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.87
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.87
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.87
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.87
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.87
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.87
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.87
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.87
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.86
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.86
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.86
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.86
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.86
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.86
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.86
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.86
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.86
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.86
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.86
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.86
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.86
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.86
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.86
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.86
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.86
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.86
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.86
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.85
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.85
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.85
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.85
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.85
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.85
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.85
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.85
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.85
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.85
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.85
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.85
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.85
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.85
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.85
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.85
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.85
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.85
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.85
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.84
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.84
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.84
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.84
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.84
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.84
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.84
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.84
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.84
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.84
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.84
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.84
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.84
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.84
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.84
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.84
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.84
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.84
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.84
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.83
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.83
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.83
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.83
3bhy_A	283	Death-associated protein kinase 3; death associate	99.83
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.83
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.83
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.83
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.83
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.83
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.83
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.83
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.82
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.82
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.82
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.82
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.82
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.82
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.82
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.82
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.82
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.82
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.82
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.82
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.81
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.81
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.81
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.81
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.8
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.8
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.8
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.78
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.78
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.78
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.78
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.77
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.77
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.77
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.77
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.76
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.76
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.76
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.75
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.75
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.74
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.74
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.74
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.74
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.74
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.74
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.74
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.74
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.74
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.74
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.74
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.73
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.73
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.73
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.73
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.73
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.72
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.72
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.72
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.72
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.72
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.72
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.72
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.72
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.72
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.72
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.72
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.72
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.71
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.71
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.71
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.71
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.71
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.71
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.71
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.71
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.7
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.7
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.7
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.7
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.7
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.7
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.7
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.7
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.7
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.69
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.69
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.69
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.69
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.69
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.69
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.69
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.69
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.69
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.68
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.68
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.68
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.68
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.68
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.68
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.68
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.68
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.67
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.67
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.67
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.67
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.67
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.67
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.66
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.66
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.66
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.66
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.65
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.64
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.63
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.63
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.63
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.62
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.59
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.57
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.46
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.45
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.43
3uqc_A	286	Probable conserved transmembrane protein; structur	99.4
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	96.64
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	81.99

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.97  E-value=3.7e-30  Score=177.98  Aligned_cols=130  Identities=28%  Similarity=0.494  Sum_probs=109.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCc--cchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGA--NYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (142)
                      ||+.|||||++.+...++.++||||+||++|||++|++||.+. ...++..+....+.++...+...  .....+...++
T Consensus       224 GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~  303 (398)
T 4b99_A          224 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLP  303 (398)
T ss_dssp             CCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSC
T ss_pred             eChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCC
Confidence            8999999999887778899999999999999999999999887 45667778888887776655432  33455667778


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAH  131 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~  131 (142)
                      .....++...++.++.++++||.+||.+||++|+|++|+|+||||.+..+...
T Consensus       304 ~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~p~~  356 (398)
T 4b99_A          304 PRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDD  356 (398)
T ss_dssp             CCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCCGGG
T ss_pred             CcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCCCcc
Confidence            88888888888999999999999999999999999999999999998755443

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.95  E-value=8.2e-28  Score=163.12  Aligned_cols=103  Identities=26%  Similarity=0.288  Sum_probs=80.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|||||++ ....|+.++||||+||++|||++|+.||.+.........+.....+...                   
T Consensus       232 GTp~YmAPEvl-~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~-------------------  291 (346)
T 4fih_A          232 GTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLK-------------------  291 (346)
T ss_dssp             SCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCS-------------------
T ss_pred             cCcCcCCHHHH-CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCC-------------------
Confidence            89999999995 4558999999999999999999999999876544433333221111111                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                            .+..++.++++||.+||..||++|||++|+++||||.+.....
T Consensus       292 ------~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~p~  334 (346)
T 4fih_A          292 ------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPA  334 (346)
T ss_dssp             ------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGG
T ss_pred             ------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCCCc
Confidence                  1134788999999999999999999999999999999765443

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.95  E-value=6.2e-28  Score=165.16  Aligned_cols=126  Identities=24%  Similarity=0.315  Sum_probs=84.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC--ChhHHHHHHHHhCCCCCC--------------CCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKE--------------TWP   65 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~--~~~~~~~~~~~~~~~~~~--------------~~~   65 (142)
                      ||+.|||||++.+...|+.++||||+||++|+|++|+.||...  +.+++..+...++.+...              ..+
T Consensus       208 GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p  287 (361)
T 4f9c_A          208 GTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVP  287 (361)
T ss_dssp             CCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCC
T ss_pred             cCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCc
Confidence            8999999999877778999999999999999999999999655  345666666655532100              000


Q ss_pred             Cc--cchHHHhhcCCCC---------CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           66 GA--NYISELLHSLPQC---------EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        66 ~~--~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ..  ....+........         ......+.+..++.++++||.+||.+||++|+||+|+++||||+++.
T Consensus       288 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          288 AQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS  360 (361)
T ss_dssp             CCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred             chhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            00  0000000000000         00111233456889999999999999999999999999999999863

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.95  E-value=8.5e-28  Score=158.78  Aligned_cols=96  Identities=20%  Similarity=0.162  Sum_probs=75.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|||||++.+...++.++||||+||++|+|++|+.||.+.....+...+.......                     
T Consensus       173 GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~---------------------  231 (275)
T 3hyh_A          173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL---------------------  231 (275)
T ss_dssp             --CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC---------------------
T ss_pred             ECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC---------------------
Confidence            89999999997666456789999999999999999999998765544433332211100                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                             ...++.++++||.+||..||++|||++|+++||||+.
T Consensus       232 -------p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          232 -------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             -------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             -------CCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence                   1237889999999999999999999999999999974

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.95  E-value=4.9e-27  Score=162.86  Aligned_cols=104  Identities=26%  Similarity=0.278  Sum_probs=80.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|||||++. ...|+.++||||+||++|||++|+.||.+.........+.....+....                  
T Consensus       309 GTp~YmAPEvl~-~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~------------------  369 (423)
T 4fie_A          309 GTPYWMAPELIS-RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKN------------------  369 (423)
T ss_dssp             ECTTTCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSC------------------
T ss_pred             cCcCcCCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcc------------------
Confidence            799999999954 5589999999999999999999999998765544333332211111111                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAH  131 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~  131 (142)
                             ...++.++++||.+||..||++|+|++|+++||||.+......
T Consensus       370 -------~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~p~~  412 (423)
T 4fie_A          370 -------LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS  412 (423)
T ss_dssp             -------TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGGG
T ss_pred             -------cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCCCcc
Confidence                   1347889999999999999999999999999999997654443

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.94  E-value=2.5e-27  Score=157.64  Aligned_cols=96  Identities=19%  Similarity=0.134  Sum_probs=74.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|||||++. + .|+.++||||+||++|+|++|+.||.+. ....+...+..... +                    
T Consensus       192 GTp~YmAPE~~~-~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~-~--------------------  248 (290)
T 3fpq_A          192 GTPEFMAPEMYE-E-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK-P--------------------  248 (290)
T ss_dssp             SSCCCCCGGGGG-T-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC-C--------------------
T ss_pred             cCccccCHHHcC-C-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC-C--------------------
Confidence            899999999853 3 6999999999999999999999999755 33333333221110 0                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                           .......++++++||.+||..||++|||++++++||||++
T Consensus       249 -----~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          249 -----ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             -----GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             -----CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence                 0112346788999999999999999999999999999985

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.94  E-value=5.7e-27  Score=156.76  Aligned_cols=96  Identities=18%  Similarity=0.225  Sum_probs=76.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|||||++. ...|+.++|+||+||++|+|++|+.||.+.+...+...+.......                     
T Consensus       188 GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~---------------------  245 (304)
T 3ubd_A          188 GTVEYMAPEVVN-RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM---------------------  245 (304)
T ss_dssp             CCGGGCCHHHHH-TSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC---------------------
T ss_pred             cCcccCCHHHhc-cCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCC---------------------
Confidence            899999999965 4589999999999999999999999998775544433332211100                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~  126 (142)
                             ...++.++++||.+||..||++|+|     ++|+++||||+.+
T Consensus       246 -------p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          246 -------PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             -------CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             -------CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence                   1237889999999999999999998     5799999999975

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.94  E-value=3.8e-27  Score=157.84  Aligned_cols=96  Identities=22%  Similarity=0.365  Sum_probs=76.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|||||++.+ ..|+.++|+||+||++|+|++|..||.+.+...+...+.......                     
T Consensus       196 GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~---------------------  253 (311)
T 4aw0_A          196 GTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF---------------------  253 (311)
T ss_dssp             SCGGGCCHHHHHH-SCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC---------------------
T ss_pred             cCcccCCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC---------------------
Confidence            8999999999654 489999999999999999999999998775544433332211100                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHH------HhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAND------ALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~------~l~~~~~~~~  126 (142)
                             ...++.++++||.+||..||++|+|++|      +++||||+++
T Consensus       254 -------p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i  297 (311)
T 4aw0_A          254 -------PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  297 (311)
T ss_dssp             -------CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             -------CcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence                   1237889999999999999999999987      5899999876

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.94  E-value=7.9e-26  Score=152.02  Aligned_cols=126  Identities=36%  Similarity=0.685  Sum_probs=104.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhh-cCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLH-SLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   79 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|..||.+. .......+....+.+....++.......+.. .+..
T Consensus       181 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (311)
T 3niz_A          181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQV  260 (311)
T ss_dssp             CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCC
T ss_pred             ccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhccccc
Confidence            6889999999777667999999999999999999999999877 5667778888888887777665554444432 3334


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      .....+......++.++.+||.+||..||++|||++++++||||+++.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          261 FEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             CCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             ccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence            445566677788999999999999999999999999999999999875

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.94  E-value=4.7e-26  Score=151.50  Aligned_cols=125  Identities=40%  Similarity=0.704  Sum_probs=102.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+...++.++|+||+||++|+|++|..||.+. .......+....+.+....++.......+...+...
T Consensus       162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (288)
T 1ob3_A          162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY  241 (288)
T ss_dssp             CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC
T ss_pred             ccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccc
Confidence            6889999999766667999999999999999999999999877 445566777777877777666555555555555555


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                      ....+......++.++.+||.+||..||++|||++++++||||++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             CCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             cCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            5566666677899999999999999999999999999999999864

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.94  E-value=1.7e-26  Score=156.94  Aligned_cols=97  Identities=26%  Similarity=0.322  Sum_probs=77.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|||||++. +..|+.++||||+||++|+|++|+.||.+.+...+...+.....++.                    
T Consensus       187 GT~~YmAPE~l~-~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~--------------------  245 (350)
T 4b9d_A          187 GTPYYLSPEICE-NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPV--------------------  245 (350)
T ss_dssp             SCCTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC--------------------
T ss_pred             CCccccCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCC--------------------
Confidence            899999999965 45899999999999999999999999987755443332222111110                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                             ...++.++++||.+||..||++|||++|+++||||.+-
T Consensus       246 -------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          246 -------SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             -------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             -------CccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence                   12378899999999999999999999999999999753

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.93  E-value=1.3e-25  Score=151.27  Aligned_cols=129  Identities=34%  Similarity=0.643  Sum_probs=97.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|..||.+. .......+....+.+....++.......+...+...
T Consensus       170 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (317)
T 2pmi_A          170 VTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQR  249 (317)
T ss_dssp             SCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCC
T ss_pred             ccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccc
Confidence            6889999999776667899999999999999999999999877 445566677777777766665544444433333333


Q ss_pred             CCchhHhh-----hcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           81 EPADLAEK-----THGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        81 ~~~~~~~~-----~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                      ........     ....+.++.+||.+||..||++|||++++++||||.+...+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~  304 (317)
T 2pmi_A          250 PPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHA  304 (317)
T ss_dssp             CCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC--
T ss_pred             cchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccchh
Confidence            32222222     235788999999999999999999999999999999876543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.93  E-value=4e-25  Score=149.30  Aligned_cols=128  Identities=34%  Similarity=0.640  Sum_probs=104.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHh-hcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELL-HSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   79 (142)
                      ||..|+|||++.+...++.++||||+|+++|+|++|..||.+. .......+....+.+....++.......+. ...+.
T Consensus       162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (324)
T 3mtl_A          162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPK  241 (324)
T ss_dssp             -CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCC
T ss_pred             CcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccccccc
Confidence            5888999999777678999999999999999999999999877 445667788888888888777655444443 33444


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ............++.++.+||.+||..||++|||++++++||||.++...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  291 (324)
T 3mtl_A          242 YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER  291 (324)
T ss_dssp             CCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred             ccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence            44555566667889999999999999999999999999999999987544

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.93  E-value=1.7e-25  Score=157.32  Aligned_cols=129  Identities=31%  Similarity=0.582  Sum_probs=101.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-----------CCCCcCCCC---------------------hhHH
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-----------GKPLFPCGK---------------------KDHL   49 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-----------g~~~~~~~~---------------------~~~~   49 (142)
                      ||+.|+|||++.....++.++||||+||++|||++           |.++|.+..                     ..++
T Consensus       245 gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l  324 (458)
T 3rp9_A          245 VTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQL  324 (458)
T ss_dssp             CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHH
T ss_pred             ccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHH
Confidence            58899999987677789999999999999999998           666665432                     3556


Q ss_pred             HHHHHHhCCCCCCCCCCc--cchHHHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           50 SLIVRLFGNPTKETWPGA--NYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ..+...++.++...+...  .....+...++......+...++..+.++.+||.+||..||++|+|++++++||||.++.
T Consensus       325 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~  404 (458)
T 3rp9_A          325 NVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR  404 (458)
T ss_dssp             HHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence            667777777665543322  233455566777777777788888999999999999999999999999999999999875


Q ss_pred             hcc
Q 048170          128 AHA  130 (142)
Q Consensus       128 ~~~  130 (142)
                      ...
T Consensus       405 ~~~  407 (458)
T 3rp9_A          405 IAE  407 (458)
T ss_dssp             CGG
T ss_pred             CCc
Confidence            543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.93  E-value=8e-26  Score=152.93  Aligned_cols=101  Identities=17%  Similarity=0.157  Sum_probs=77.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh-HHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD-HLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|||||++.+ ..|+.++||||+||++|+|++|+.||.+.... ....+..  +.                      
T Consensus       218 GT~~YmAPE~~~~-~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~--~~----------------------  272 (336)
T 4g3f_A          218 GTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS--EP----------------------  272 (336)
T ss_dssp             CCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH--SC----------------------
T ss_pred             cCccccCHHHHCC-CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc--CC----------------------
Confidence            7999999999654 58999999999999999999999999765332 2222222  00                      


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHH-------------hcCCCccchhhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA-------------LCIGTSEKLLAH  129 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~-------------l~~~~~~~~~~~  129 (142)
                        .+..+....++.++.+||.+||..||++|||+.|+             ++|||+.+...+
T Consensus       273 --~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~P  332 (336)
T 4g3f_A          273 --PPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEP  332 (336)
T ss_dssp             --CGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCCC
T ss_pred             --CCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCCC
Confidence              01112334588999999999999999999999997             579999876543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.92  E-value=3.2e-25  Score=152.17  Aligned_cols=130  Identities=35%  Similarity=0.540  Sum_probs=106.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCc--cchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGA--NYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+...++.++||||+||++++|++|+.||.+. ....+..+....+.+........  .....+...+.
T Consensus       191 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~  270 (367)
T 2fst_X          191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT  270 (367)
T ss_dssp             CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSC
T ss_pred             cCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccC
Confidence            6889999999776568999999999999999999999999877 44667777887787665543332  22344556667


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAH  131 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~  131 (142)
                      ......+...+...+.++.+||.+||..||++|||++++++||||........
T Consensus       271 ~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~  323 (367)
T 2fst_X          271 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDD  323 (367)
T ss_dssp             CCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCGGG
T ss_pred             CCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccCCCC
Confidence            76777777888889999999999999999999999999999999998765543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.92  E-value=4.1e-25  Score=149.52  Aligned_cols=125  Identities=33%  Similarity=0.593  Sum_probs=99.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++.+...++.++||||+||++|+|++|..||.+. .......+....+.+....++.......+...++..
T Consensus       199 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (329)
T 3gbz_A          199 ITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKF  278 (329)
T ss_dssp             -CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC
T ss_pred             CCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhh
Confidence            5888999999776667999999999999999999999999877 445667777788887777766655555554555544


Q ss_pred             CCchhHhhh-cCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           81 EPADLAEKT-HGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~-~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                      ......... ...+.++.+||.+||..||++|||++++++||||++.
T Consensus       279 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          279 RGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN  325 (329)
T ss_dssp             CCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred             ccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence            444444333 3478899999999999999999999999999999875

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.92  E-value=2.4e-25  Score=148.25  Aligned_cols=126  Identities=28%  Similarity=0.485  Sum_probs=94.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcC-CC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||..|+|||++.+...++.++||||+||++++|++|..||. +. .......+....+.+....++.......+......
T Consensus       163 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (292)
T 3o0g_A          163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY  242 (292)
T ss_dssp             SCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCC
T ss_pred             cccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccc
Confidence            68889999997766668999999999999999998877754 33 34556777788887777766654443333222222


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      .............+.++++||.+||..||++|||++++++||||.+..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             CTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             cCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence            223333444566889999999999999999999999999999999764

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=2.8e-25  Score=152.45  Aligned_cols=129  Identities=36%  Similarity=0.537  Sum_probs=103.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCc--cchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGA--NYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+...++.++|+||+||++++|++|+.||.+. ....+..+....+.++.......  .....+...++
T Consensus       187 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  266 (367)
T 1cm8_A          187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLP  266 (367)
T ss_dssp             SCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSC
T ss_pred             CCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCC
Confidence            6889999999777668999999999999999999999999877 44667777777777665433222  22345556677


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                      ......+...+...+.++.+||.+||..||++|+|++++++||||....+..
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~~  318 (367)
T 1cm8_A          267 ELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTE  318 (367)
T ss_dssp             CCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC---
T ss_pred             CCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCCc
Confidence            7667777777788999999999999999999999999999999999876543

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.92  E-value=6.2e-25  Score=153.56  Aligned_cols=130  Identities=29%  Similarity=0.564  Sum_probs=103.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhC-----------CCCcCCCC------------------hhHHHHH
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSG-----------KPLFPCGK------------------KDHLSLI   52 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g-----------~~~~~~~~------------------~~~~~~~   52 (142)
                      ||+.|+|||++.....++.++||||+||++|+|++|           .++|.+..                  ..++..+
T Consensus       213 gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i  292 (432)
T 3n9x_A          213 VTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNII  292 (432)
T ss_dssp             CCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHH
T ss_pred             CCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHH
Confidence            688999999976777899999999999999999974           44443332                  3567777


Q ss_pred             HHHhCCCCCCCCCC--ccchHHHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           53 VRLFGNPTKETWPG--ANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        53 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                      ...++.++......  ......+...++..........++.++.++.+||.+||..||++|||++++++||||.++....
T Consensus       293 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~  372 (432)
T 3n9x_A          293 FNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKK  372 (432)
T ss_dssp             HHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTT
T ss_pred             HHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcc
Confidence            88888776554332  2334455667777777778888889999999999999999999999999999999999876554


Q ss_pred             c
Q 048170          131 H  131 (142)
Q Consensus       131 ~  131 (142)
                      .
T Consensus       373 ~  373 (432)
T 3n9x_A          373 L  373 (432)
T ss_dssp             T
T ss_pred             c
Confidence            3

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.92  E-value=1.5e-24  Score=145.47  Aligned_cols=123  Identities=37%  Similarity=0.626  Sum_probs=96.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+. .++.++||||+||++|+|++|..||.+. .......+....+.++...++.......  ..+...
T Consensus       181 gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~  257 (308)
T 3g33_A          181 VTLWYRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR--GAFPPR  257 (308)
T ss_dssp             CCCSSCCHHHHHTS-CCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCG--GGSCCC
T ss_pred             ccccccCchHHcCC-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccc--cccCCC
Confidence            68899999996554 7899999999999999999999999877 4456677778888777776654433222  234444


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ...........++.++.+||.+||..||++|||+.++++||||.+..
T Consensus       258 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          258 GPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             CCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             CCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence            55566677788999999999999999999999999999999998753

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.92  E-value=1.3e-24  Score=148.91  Aligned_cols=130  Identities=29%  Similarity=0.499  Sum_probs=104.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCc--cchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGA--NYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|..||.+. .......+...++.+........  .....+....+
T Consensus       193 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (364)
T 3qyz_A          193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP  272 (364)
T ss_dssp             SCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSC
T ss_pred             cccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcC
Confidence            6888999999777767999999999999999999999999877 55667777777776655433222  22334455666


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAH  131 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~  131 (142)
                      ......+.......+.++.+||.+||..||++|||++++++||||.+......
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~  325 (364)
T 3qyz_A          273 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD  325 (364)
T ss_dssp             CCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred             CccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccCccc
Confidence            66667777778889999999999999999999999999999999998755443

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.92  E-value=6.2e-25  Score=151.57  Aligned_cols=130  Identities=26%  Similarity=0.489  Sum_probs=90.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCcc--chHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGAN--YISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+...++.++||||+||++++|++|++||.+. ....+..+...++.+.........  ....+...+.
T Consensus       192 gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~  271 (388)
T 3oz6_A          192 ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLK  271 (388)
T ss_dssp             CGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHH
T ss_pred             ccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCc
Confidence            7889999999777678999999999999999999999999877 456677777777766543221110  0011110000


Q ss_pred             ------CCC----CchhHh------hhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccc
Q 048170           79 ------QCE----PADLAE------KTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAH  131 (142)
Q Consensus        79 ------~~~----~~~~~~------~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~  131 (142)
                            ...    ...+..      .....+.++.+||.+||..||++|||++++++||||........
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~~~  340 (388)
T 3oz6_A          272 EKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNE  340 (388)
T ss_dssp             HHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCGGG
T ss_pred             ccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCCcc
Confidence                  000    000000      01257889999999999999999999999999999987654433

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.92  E-value=7.1e-25  Score=154.49  Aligned_cols=126  Identities=28%  Similarity=0.438  Sum_probs=93.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCcc-chHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGAN-YISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   79 (142)
                      ||+.|+|||++.+. .++.++||||+||++|+|++|+.||.+. ...++..++..++.+.+..+.... ....+....+.
T Consensus       225 gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~  303 (464)
T 3ttj_A          225 VTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK  303 (464)
T ss_dssp             CCCTTCCHHHHTTC-CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCC
T ss_pred             ccccccCHHHHcCC-CCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccc
Confidence            68999999996654 8999999999999999999999999877 456778888888877665443322 22233333333


Q ss_pred             CCCchhHhhhcC------------CCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           80 CEPADLAEKTHG------------LEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        80 ~~~~~~~~~~~~------------~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                      .........+..            .+.++++||.+||..||++|||++++++||||....+
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~  364 (464)
T 3ttj_A          304 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD  364 (464)
T ss_dssp             CCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred             cCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhccC
Confidence            333333332222            1567899999999999999999999999999986543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.91  E-value=5.9e-25  Score=158.12  Aligned_cols=101  Identities=21%  Similarity=0.214  Sum_probs=79.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|||||++.+ ..|+.++||||+||++|+|++|..||.+.........+........                    
T Consensus       318 GT~~y~APEv~~~-~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~--------------------  376 (573)
T 3uto_A          318 GTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD--------------------  376 (573)
T ss_dssp             SSGGGCCHHHHTT-CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC--------------------
T ss_pred             ECccccCHHHhCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCC--------------------
Confidence            7999999999654 5899999999999999999999999987755443333322111000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                          ...+..++.++++||.+||..||++|+|++|+++||||+...
T Consensus       377 ----~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~  418 (573)
T 3uto_A          377 ----DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN  418 (573)
T ss_dssp             ----SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCC
T ss_pred             ----cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCC
Confidence                112345789999999999999999999999999999998643

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.91  E-value=5.8e-25  Score=159.24  Aligned_cols=100  Identities=22%  Similarity=0.256  Sum_probs=75.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|||||++..+..|+.++|+||+||++|+|++|.+||.+........+..........                   
T Consensus       352 GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~-------------------  412 (689)
T 3v5w_A          352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE-------------------  412 (689)
T ss_dssp             SCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCC-------------------
T ss_pred             CCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC-------------------
Confidence            8999999999766668999999999999999999999999754221111111111000000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~  126 (142)
                            ....++.++++||.+||..||++|++     ++++++||||+.+
T Consensus       413 ------~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          413 ------LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             ------CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred             ------CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence                  01237889999999999999999998     7999999999965

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=7.3e-24  Score=144.28  Aligned_cols=125  Identities=27%  Similarity=0.467  Sum_probs=97.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|.+||.+. .......+....+.+....++.......+. .+...
T Consensus       174 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~  252 (346)
T 1ua2_A          174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV-TFKSF  252 (346)
T ss_dssp             CCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCC-CCCCC
T ss_pred             ccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccc-ccccc
Confidence            6888999999766667999999999999999999999999877 445566777777777776665543333221 12223


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ...+........+.++.+||.+||..||++|||++++++||||.+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~  299 (346)
T 1ua2_A          253 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP  299 (346)
T ss_dssp             CCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             CCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence            33445566677899999999999999999999999999999998643

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.91  E-value=4e-24  Score=148.29  Aligned_cols=126  Identities=28%  Similarity=0.583  Sum_probs=93.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC----------hhHHHHHHHHhCCCCCCCCCCccchH
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK----------KDHLSLIVRLFGNPTKETWPGANYIS   71 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|..||.+..          ...+..++..++.+....+.......
T Consensus       197 gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~  276 (405)
T 3rgf_A          197 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMP  276 (405)
T ss_dssp             CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGST
T ss_pred             ecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCc
Confidence            68899999997776679999999999999999999999997552          36778888888988877765443322


Q ss_pred             HH---hhcCCC-----CCCch-hHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           72 EL---LHSLPQ-----CEPAD-LAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        72 ~~---~~~~~~-----~~~~~-~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ..   ...+..     ..... ........+.++.+||.+||..||.+|||++++++||||.+..
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~  341 (405)
T 3rgf_A          277 EHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP  341 (405)
T ss_dssp             THHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred             chhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence            21   111111     11000 1111123477899999999999999999999999999998654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.91  E-value=7.2e-24  Score=145.57  Aligned_cols=129  Identities=34%  Similarity=0.477  Sum_probs=102.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCc--cchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGA--NYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+...++.++||||+||++++|++|..||.+. .......+....+.+........  .....+...+.
T Consensus       203 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (371)
T 4exu_A          203 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLP  282 (371)
T ss_dssp             CCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSC
T ss_pred             cCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccC
Confidence            6889999999776568999999999999999999999999877 44556667777776554433222  22334455666


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                      ..............+.++.+||.+||..||++|||++++++||||.......
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~  334 (371)
T 4exu_A          283 QTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE  334 (371)
T ss_dssp             CCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCGG
T ss_pred             CCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCCcc
Confidence            6666677777788999999999999999999999999999999999765443

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.91  E-value=1e-24  Score=150.88  Aligned_cols=128  Identities=31%  Similarity=0.582  Sum_probs=94.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|+.||.+. ....+..++..++.+......... .......++..
T Consensus       203 ~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~-~~~~~~~~~~~  281 (394)
T 4e7w_A          203 CSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN-PNYMEHKFPQI  281 (394)
T ss_dssp             SCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC-GGGSSSCCCCC
T ss_pred             cCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC-hhhhhhccccc
Confidence            6788999999777767999999999999999999999999877 446667777777765443221100 00001223333


Q ss_pred             CCchhHhhh-cCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           81 EPADLAEKT-HGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        81 ~~~~~~~~~-~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                      ...++...+ ...+.++.+||.+||..||++|||+.++++||||.++....
T Consensus       282 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~  332 (394)
T 4e7w_A          282 RPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGE  332 (394)
T ss_dssp             CCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSSC
T ss_pred             cCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcccc
Confidence            333444333 34889999999999999999999999999999999876543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.90  E-value=2.7e-24  Score=150.21  Aligned_cols=127  Identities=28%  Similarity=0.459  Sum_probs=87.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC--
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLP--   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   78 (142)
                      ||+.|+|||++.+. .++.++||||+||++|+|++|..||.+. ....+..+...++.++............+.....  
T Consensus       261 gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~  339 (429)
T 3kvw_A          261 QSRFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYP  339 (429)
T ss_dssp             SCGGGCCHHHHHTB-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCB
T ss_pred             CCCCccChHHHhCC-CCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCc
Confidence            68899999996654 7899999999999999999999999877 4456677777777665543332222222211110  


Q ss_pred             ---------------------------CCCCchhHhh-hcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           79 ---------------------------QCEPADLAEK-THGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        79 ---------------------------~~~~~~~~~~-~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                                                 ......+... ....+.++.+||.+||..||++|||++|+++||||++...+
T Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~~  418 (429)
T 3kvw_A          340 RYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPK  418 (429)
T ss_dssp             TTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC-----
T ss_pred             ccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCCC
Confidence                                       0011111111 23357788999999999999999999999999999976543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.90  E-value=3.1e-23  Score=141.21  Aligned_cols=128  Identities=32%  Similarity=0.536  Sum_probs=99.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCC---ccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPG---ANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   77 (142)
                      ||+.|+|||++.+...++.++|+||+||++++|++|..||.+... .....+....+.+.......   ......+...+
T Consensus       184 gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
T 2b9h_A          184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSL  263 (353)
T ss_dssp             CCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTS
T ss_pred             ccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcc
Confidence            578899999977667899999999999999999999999987743 45555666666655332221   12233444556


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      +.............++.++.+||.+||..||++|||++++++||||......
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  315 (353)
T 2b9h_A          264 PMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDP  315 (353)
T ss_dssp             CCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred             cCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCc
Confidence            6666666677778899999999999999999999999999999999976543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.90  E-value=2.4e-24  Score=150.16  Aligned_cols=126  Identities=28%  Similarity=0.489  Sum_probs=92.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHH-hhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISEL-LHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   79 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|+.||.+. ....+..++..++.+....+....  ..+ ...++.
T Consensus       218 ~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~--~~~~~~~~p~  295 (420)
T 1j1b_A          218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQ  295 (420)
T ss_dssp             SCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHC--SCCCCCCCCC
T ss_pred             eCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC--hhhhhhccCc
Confidence            6889999999776668999999999999999999999999877 446677777777755432211000  000 011222


Q ss_pred             CCCchhHhhh-cCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           80 CEPADLAEKT-HGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        80 ~~~~~~~~~~-~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      .....+...+ ...+.++.+||.+||..||.+|+++.++++||||..+...
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  346 (420)
T 1j1b_A          296 IKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDP  346 (420)
T ss_dssp             CCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCT
T ss_pred             cCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccccc
Confidence            2333333332 4578899999999999999999999999999999877544

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.90  E-value=3e-24  Score=147.98  Aligned_cols=126  Identities=29%  Similarity=0.513  Sum_probs=92.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|+.||.+. ....+..++..++.+........... -....++..
T Consensus       203 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~-~~~~~~~~~  281 (383)
T 3eb0_A          203 CSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPH-YTEVRFPTL  281 (383)
T ss_dssp             CCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTT-C--CCCCCC
T ss_pred             cCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcc-cccccCCcc
Confidence            6788999999777667999999999999999999999999877 55667777777776543321100000 001122222


Q ss_pred             CCchhHhhh-cCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           81 EPADLAEKT-HGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        81 ~~~~~~~~~-~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                      ....+.... ...+.++.+||.+||..||++|||+.++++||||.++..
T Consensus       282 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  330 (383)
T 3eb0_A          282 KAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRN  330 (383)
T ss_dssp             CCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred             CcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence            333333333 447888999999999999999999999999999998754

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.90  E-value=6.8e-24  Score=146.17  Aligned_cols=125  Identities=26%  Similarity=0.378  Sum_probs=84.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+. .++.++||||+||++|+|++|+.||.+. ....+..+....+.++............+...++..
T Consensus       220 ~t~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (382)
T 2vx3_A          220 QSRFYRSPEVLLGM-PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDG  298 (382)
T ss_dssp             SCGGGCCHHHHTTC-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTS
T ss_pred             CCccccChHHHcCC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhcccc
Confidence            68899999996554 7999999999999999999999999877 445566677766665544332222222222222111


Q ss_pred             -----------------CCchhHhhhcC------------------CCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           81 -----------------EPADLAEKTHG------------------LEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        81 -----------------~~~~~~~~~~~------------------~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                                       ....+......                  ...++++||.+||..||++|||++++++||||++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~  378 (382)
T 2vx3_A          299 TWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK  378 (382)
T ss_dssp             CEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC
T ss_pred             ccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCccccc
Confidence                             00111111100                  0136789999999999999999999999999987


Q ss_pred             hh
Q 048170          126 LL  127 (142)
Q Consensus       126 ~~  127 (142)
                      ..
T Consensus       379 ~~  380 (382)
T 2vx3_A          379 TA  380 (382)
T ss_dssp             --
T ss_pred             CC
Confidence            64

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.90  E-value=4e-23  Score=139.89  Aligned_cols=98  Identities=23%  Similarity=0.170  Sum_probs=77.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+....+.++||||+||++|+|++|..||.+.........+.......+                    
T Consensus       175 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p--------------------  234 (328)
T 3fe3_A          175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--------------------  234 (328)
T ss_dssp             SSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--------------------
T ss_pred             CCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--------------------
Confidence            788999999977665556899999999999999999999987765554443332111100                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                              ...+.++.+|+.+||..||.+|||++++++||||....
T Consensus       235 --------~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          235 --------FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             --------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             --------CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence                    12678899999999999999999999999999998654

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.90  E-value=3.2e-23  Score=141.39  Aligned_cols=128  Identities=35%  Similarity=0.496  Sum_probs=95.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCcc--chHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGAN--YISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+...++.++|+||+|+++++|++|..||.+.. ...+..+....+.++........  ....+...++
T Consensus       185 ~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
T 3coi_A          185 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLP  264 (353)
T ss_dssp             CSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSC
T ss_pred             cCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCc
Confidence            68899999997765689999999999999999999999998774 34556666666655443322211  1122334444


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ..............+.++.+||.+||..||++|||++++++||||......
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~  315 (353)
T 3coi_A          265 QTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDP  315 (353)
T ss_dssp             BCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCG
T ss_pred             CCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccCc
Confidence            444444445556789999999999999999999999999999999976544

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.90  E-value=2.7e-24  Score=143.85  Aligned_cols=97  Identities=18%  Similarity=0.174  Sum_probs=69.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|||||++. +..|+.++||||+||++|||++   ||.+. .+....+........+                    
T Consensus       192 GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyell~---Pf~~~-~~~~~~~~~~~~~~~p--------------------  246 (299)
T 4g31_A          192 GTKLYMSPEQIH-GNSYSHKVDIFSLGLILFELLY---PFSTQ-MERVRTLTDVRNLKFP--------------------  246 (299)
T ss_dssp             CCCTTSCHHHHT-TCCCCTHHHHHHHHHHHHHHHS---CCSSH-HHHHHHHHHHHTTCCC--------------------
T ss_pred             cCccccCHHHHc-CCCCCCHHHHHHHHHHHHHHcc---CCCCc-cHHHHHHHHHhcCCCC--------------------
Confidence            899999999965 4589999999999999999995   67432 1122222211111000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                           ..+...+++..+||.+||..||++|||+.++++||||+++.-
T Consensus       247 -----~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~  288 (299)
T 4g31_A          247 -----PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDF  288 (299)
T ss_dssp             -----HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC--
T ss_pred             -----CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCC
Confidence                 111224566789999999999999999999999999998643

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.90  E-value=2.5e-23  Score=141.77  Aligned_cols=126  Identities=28%  Similarity=0.492  Sum_probs=91.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhc-CCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHS-LPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   79 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|..||.+. .......+....+..+...++.......+... ...
T Consensus       190 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (351)
T 3mi9_A          190 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVK  269 (351)
T ss_dssp             SCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCS
T ss_pred             cccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhccccccc
Confidence            5888999999776667899999999999999999999999877 44555667777777776665544332222111 111


Q ss_pred             CCCchhHhhh--cCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAEKT--HGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ..........  ...+.++.+||.+||..||++|||++++++||||....
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  319 (351)
T 3mi9_A          270 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP  319 (351)
T ss_dssp             SCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSS
T ss_pred             ccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCC
Confidence            1111111111  12467889999999999999999999999999998644

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.89  E-value=1.1e-22  Score=137.19  Aligned_cols=125  Identities=33%  Similarity=0.572  Sum_probs=93.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++.+ ..++.++|+||+|+++|+|++|..||.+. .......+....+.+....++.......  ..+...
T Consensus       181 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~  257 (326)
T 1blx_A          181 VTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR--QAFHSK  257 (326)
T ss_dssp             CCCTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCG--GGSCCC
T ss_pred             cccceeCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccch--hhhccc
Confidence            6888999999654 47899999999999999999999999877 4455566677667665554443222111  112222


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ...........++.++.+||.+||..||++||++.++++||||.++...
T Consensus       258 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~  306 (326)
T 1blx_A          258 SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC  306 (326)
T ss_dssp             CCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             CcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccchh
Confidence            3334455567789999999999999999999999999999999976543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.89  E-value=1.8e-23  Score=140.16  Aligned_cols=129  Identities=28%  Similarity=0.450  Sum_probs=85.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHh--hcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELL--HSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   78 (142)
                      ||..|+|||++.+...++.++|+||+|+++++|++|..||.+... .....+....+...+........ ..+.  ..++
T Consensus       164 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  242 (311)
T 4agu_A          164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST-NQYFSGVKIP  242 (311)
T ss_dssp             --GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHT-CGGGTTCCCC
T ss_pred             CCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccc-ccccccCcCC
Confidence            578899999977767899999999999999999999999987733 44444444444322111000000 0000  0011


Q ss_pred             -CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccc
Q 048170           79 -QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAH  131 (142)
Q Consensus        79 -~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~  131 (142)
                       ..............+.++.+|+.+||..||++|||++++++||||+++.....
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~  296 (311)
T 4agu_A          243 DPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIED  296 (311)
T ss_dssp             CCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC----
T ss_pred             CccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCHHH
Confidence             11122334445678899999999999999999999999999999998765543

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.89  E-value=1.7e-23  Score=142.86  Aligned_cols=129  Identities=30%  Similarity=0.451  Sum_probs=88.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|..||.+. .......+....+.++...+...... .....+...
T Consensus       193 gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  271 (360)
T 3e3p_A          193 CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPS-HTDVDLYNS  271 (360)
T ss_dssp             SCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTT-CCCGGGGCC
T ss_pred             CCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccc-hhhcccccc
Confidence            6888999999766667999999999999999999999999877 44555666666665433211100000 000001111


Q ss_pred             CCchhHhhhcC----CCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccc
Q 048170           81 EPADLAEKTHG----LEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAH  131 (142)
Q Consensus        81 ~~~~~~~~~~~----~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~  131 (142)
                      ....+...+..    .+.++.+||.+||..||.+|||+.++++||||.+......
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~  326 (360)
T 3e3p_A          272 KGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPAT  326 (360)
T ss_dssp             CCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTTC
T ss_pred             ccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCccc
Confidence            11222222222    5678899999999999999999999999999998765443

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.89  E-value=6.3e-23  Score=140.25  Aligned_cols=130  Identities=25%  Similarity=0.403  Sum_probs=95.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCC--ccchHH-HhhcC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPG--ANYISE-LLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~   77 (142)
                      ||..|+|||++.+...++.++|+||+||++|+|++|+.||.+.. ......+....+.+.......  ...... .....
T Consensus       195 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (362)
T 3pg1_A          195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSL  274 (362)
T ss_dssp             -CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCC
T ss_pred             ccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhc
Confidence            67889999997765689999999999999999999999998773 445566666666544322110  001111 12333


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccc
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAH  131 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~  131 (142)
                      .......+.......+..+.+||.+||..||++|||+.++++||||+.+.....
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~  328 (362)
T 3pg1_A          275 SNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLD  328 (362)
T ss_dssp             CCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCCGGG
T ss_pred             ccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccCccc
Confidence            444455566666778999999999999999999999999999999998755433

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.88  E-value=1.4e-22  Score=135.82  Aligned_cols=95  Identities=14%  Similarity=0.144  Sum_probs=70.5

Q ss_pred             ccCcccchhhhcCC--CCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICS--SVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~--~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||+.|||||++.+.  ..|+.++|||||||++|||++|+.||.+. ....+..++......+..                
T Consensus       196 GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~----------------  259 (307)
T 3omv_A          196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDL----------------  259 (307)
T ss_dssp             CCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCS----------------
T ss_pred             cCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCc----------------
Confidence            79999999997643  35899999999999999999999999765 333443333321111110                


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ......++.++.+|+.+||..||++|||+.++++
T Consensus       260 -------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~  293 (307)
T 3omv_A          260 -------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILS  293 (307)
T ss_dssp             -------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred             -------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                   1112347889999999999999999999998753

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.88  E-value=5.1e-23  Score=137.63  Aligned_cols=103  Identities=17%  Similarity=0.236  Sum_probs=77.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|||||++.+ ..|+.++||||+||++|||++ |+.||.+.....+...+.....++.                   
T Consensus       192 gt~~ymAPE~~~~-~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~-------------------  251 (299)
T 4asz_A          192 LPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQR-------------------  251 (299)
T ss_dssp             ECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCC-------------------
T ss_pred             cChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            6889999999654 489999999999999999998 8999987755544433332221110                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcccccc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYV  134 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~~~  134 (142)
                              ...++.++.+|+.+||..||++|||++++.  .++.++......++
T Consensus       252 --------p~~~~~~~~~li~~cl~~dP~~RPs~~~i~--~~L~~~~~~~p~~l  295 (299)
T 4asz_A          252 --------PRTCPQEVYELMLGCWQREPHMRKNIKGIH--TLLQNLAKASPVYL  295 (299)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHH--HHHHHHHHHSCCCS
T ss_pred             --------CccchHHHHHHHHHHcCCChhHCcCHHHHH--HHHHHHHhcCCccc
Confidence                    123788999999999999999999999995  67777655444333

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.88  E-value=1.8e-22  Score=138.29  Aligned_cols=100  Identities=17%  Similarity=0.138  Sum_probs=77.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+|+++|+|++|..||.+.........+.....                       
T Consensus       180 gt~~y~aPE~~~-~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-----------------------  235 (361)
T 2yab_A          180 GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY-----------------------  235 (361)
T ss_dssp             SCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC-----------------------
T ss_pred             CCccEECchHHc-CCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-----------------------
Confidence            788999999954 45899999999999999999999999987644433222221110                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                       ......+..++.++++||.+||..||++|||+.++++||||...
T Consensus       236 -~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          236 -DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             -CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             -CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence             00112345688899999999999999999999999999999854

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.88  E-value=3.2e-22  Score=133.67  Aligned_cols=100  Identities=20%  Similarity=0.262  Sum_probs=76.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+ ..++.++||||+|+++|+|++|..||...........+.....+....                  
T Consensus       178 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~------------------  238 (297)
T 3fxz_A          178 GTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN------------------  238 (297)
T ss_dssp             SCGGGCCHHHHHC-SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSC------------------
T ss_pred             CCcCccChhhhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCC------------------
Confidence            6889999999654 488999999999999999999999997664433322222222111110                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                             ...++..+.+||.+||..||++||+++++++||||+...
T Consensus       239 -------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  277 (297)
T 3fxz_A          239 -------PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAK  277 (297)
T ss_dssp             -------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             -------ccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccC
Confidence                   123678899999999999999999999999999998654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.88  E-value=3.1e-23  Score=142.40  Aligned_cols=125  Identities=26%  Similarity=0.419  Sum_probs=83.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccc-hHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANY-ISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (142)
                      ||+.|+|||++.+ ..++.++||||+||++|+|++|..||.+.+ ...+..+....+.+.+........ ...+....+.
T Consensus       188 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (371)
T 2xrw_A          188 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK  266 (371)
T ss_dssp             --CTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCC
T ss_pred             ecCCccCHHHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCcc
Confidence            6889999999654 478999999999999999999999998773 345555666555544332222111 1112222222


Q ss_pred             CCCchhHhhhc------------CCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTH------------GLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~------------~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ...........            ..+.++++||.+||..||++|||++++++||||....
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~  326 (371)
T 2xrw_A          267 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY  326 (371)
T ss_dssp             CCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             ccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhc
Confidence            22112211111            1256789999999999999999999999999998643

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.87  E-value=4.7e-22  Score=134.30  Aligned_cols=127  Identities=21%  Similarity=0.331  Sum_probs=81.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC--ChhHHHHHHHHhCCCCCCCC---CCccchHHHhhc
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKETW---PGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   76 (142)
                      ||..|+|||++.+...++.++||||+||++++|++|..||...  ....+..+....+.......   ........+...
T Consensus       192 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (330)
T 3nsz_A          192 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI  271 (330)
T ss_dssp             SCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHH
T ss_pred             ccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhh
Confidence            6788999999776568999999999999999999999999554  22333333333331100000   000000011111


Q ss_pred             CCCCCCchhHhh-----hcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           77 LPQCEPADLAEK-----THGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        77 ~~~~~~~~~~~~-----~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                      ........+...     ...++.++.+||.+||..||++|||++++++||||.++..
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  328 (330)
T 3nsz_A          272 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  328 (330)
T ss_dssp             HCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred             hhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence            111111111111     1237889999999999999999999999999999998753

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.87  E-value=3.4e-22  Score=140.16  Aligned_cols=99  Identities=24%  Similarity=0.330  Sum_probs=77.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCC-CCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGN-PTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|..||.+.........+..... .+..                  
T Consensus       175 gt~~Y~APE~l~-~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~------------------  235 (444)
T 3soa_A          175 GTPGYLSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSP------------------  235 (444)
T ss_dssp             SCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTT------------------
T ss_pred             CCcccCCHHHhc-CCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCcc------------------
Confidence            789999999954 44899999999999999999999999987755444333322111 1111                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                             .+..++.++++||.+||..||++|||+.++++||||...
T Consensus       236 -------~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          236 -------EWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             -------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred             -------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence                   123478899999999999999999999999999999864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.87  E-value=6.4e-22  Score=134.44  Aligned_cols=96  Identities=23%  Similarity=0.300  Sum_probs=76.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||.+.........+......                      
T Consensus       167 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~----------------------  223 (337)
T 1o6l_A          167 GTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR----------------------  223 (337)
T ss_dssp             ECGGGCCGGGGS-SSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC----------------------
T ss_pred             cChhhCChhhhc-CCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------------------
Confidence            688999999954 458899999999999999999999999876554443332211100                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                            ....++.++.+||.+||..||++|+     +++++++||||..+
T Consensus       224 ------~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          224 ------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             ------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             ------CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence                  0123788999999999999999999     89999999999864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.87  E-value=5.6e-23  Score=140.40  Aligned_cols=122  Identities=22%  Similarity=0.296  Sum_probs=78.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccc--------hHH
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANY--------ISE   72 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~   72 (142)
                      ||+.|+|||++.+ ..++.++||||+||++|+|++|+.||..... .....+....+..+.........        ...
T Consensus       221 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  299 (360)
T 3llt_A          221 NTRQYRAPEVILN-LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDE  299 (360)
T ss_dssp             SCGGGCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTT
T ss_pred             CcccccCcHHHcC-CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCccc
Confidence            6889999999654 4799999999999999999999999987744 44444444444333211000000        000


Q ss_pred             HhhcCCCCCCchh---------HhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           73 LLHSLPQCEPADL---------AEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        73 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                      ....++.......         .......+..+.+||.+||..||++|||++++++||||+
T Consensus       300 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          300 LKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             TEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             ceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            0000010000000         011122457788999999999999999999999999985

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.87  E-value=3.5e-22  Score=134.07  Aligned_cols=90  Identities=16%  Similarity=0.188  Sum_probs=70.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|||||++.+. .|+.++|||||||++|||++ |..||.+.....+...+......+.                   
T Consensus       209 gt~~ymAPE~l~~~-~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~-------------------  268 (308)
T 4gt4_A          209 LPIRWMAPEAIMYG-KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC-------------------  268 (308)
T ss_dssp             BCGGGCCHHHHHHC-CCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             cCCcccCHHHHhCC-CCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            68899999996544 89999999999999999998 8999987755554444332211111                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                              ...++.++.+|+.+||..||++|||+.+|++
T Consensus       269 --------p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~  299 (308)
T 4gt4_A          269 --------PDDCPAWVYALMIECWNEFPSRRPRFKDIHS  299 (308)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------cccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                    1247888999999999999999999999875

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.87  E-value=2.2e-22  Score=137.49  Aligned_cols=96  Identities=21%  Similarity=0.244  Sum_probs=76.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.+.........+.......                     
T Consensus       186 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~---------------------  243 (353)
T 3txo_A          186 GTPDYIAPEILQE-MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY---------------------  243 (353)
T ss_dssp             CCGGGCCHHHHHH-HHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC---------------------
T ss_pred             CCcCeEChhhcCC-CCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC---------------------
Confidence            7899999999654 478999999999999999999999998775544433322211100                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH------HHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA------NDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~------~~~l~~~~~~~~  126 (142)
                             ...++.++.+||.+||..||.+|+++      +++++||||.++
T Consensus       244 -------p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          244 -------PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             -------CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             -------CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence                   12267889999999999999999998      899999999865

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.87  E-value=2.7e-22  Score=136.79  Aligned_cols=91  Identities=20%  Similarity=0.297  Sum_probs=70.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|||||++.+ ..|+.++|||||||++|||++ |+.||.+.. ...+...+.....+..                  
T Consensus       249 gt~~ymAPE~l~~-~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~------------------  309 (353)
T 4ase_A          249 LPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA------------------  309 (353)
T ss_dssp             ECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCC------------------
T ss_pred             ccccccCHHHHhc-CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCC------------------
Confidence            6788999999665 489999999999999999997 899998663 3334333332221111                  


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                               ...++.++.+|+.+||..||++|||+.++++|
T Consensus       310 ---------p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          310 ---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             ---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence                     12378899999999999999999999999876

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.87  E-value=6.1e-22  Score=132.18  Aligned_cols=97  Identities=19%  Similarity=0.164  Sum_probs=73.7

Q ss_pred             ccCcccchhhhcCCCC--CChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSV--YMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~--~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|+|||++.+...  ++.++|+||+|+++|+|++|..||...........+.......+.                 
T Consensus       199 gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-----------------  261 (298)
T 2zv2_A          199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD-----------------  261 (298)
T ss_dssp             SCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS-----------------
T ss_pred             CCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCC-----------------
Confidence            6889999999654432  478899999999999999999999766544433322211110000                 


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                               ...++.++.+||.+||..||++||++.++++||||.
T Consensus       262 ---------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          262 ---------QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             ---------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             ---------ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence                     124788899999999999999999999999999986

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.87  E-value=9.3e-22  Score=137.98  Aligned_cols=96  Identities=24%  Similarity=0.296  Sum_probs=77.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+ ..++.++|+||+||++|+|++|..||...........+.......                     
T Consensus       311 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~---------------------  368 (446)
T 4ejn_A          311 GTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF---------------------  368 (446)
T ss_dssp             SCGGGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC---------------------
T ss_pred             CCccccCHhhcCC-CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCC---------------------
Confidence            7899999999654 489999999999999999999999998765544433332211110                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                             ...++.++.+||.+||..||.+||     +++++++||||..+
T Consensus       369 -------p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          369 -------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             -------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             -------CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence                   123678899999999999999999     99999999999965

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.87  E-value=3.1e-22  Score=138.09  Aligned_cols=128  Identities=20%  Similarity=0.177  Sum_probs=73.8

Q ss_pred             ccCcccchhhhcCC-CCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCC--------CCCCCCCCc---c
Q 048170            2 VEFPYKAPESRICS-SVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGN--------PTKETWPGA---N   68 (142)
Q Consensus         2 ~t~~y~~PE~~~~~-~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~~~---~   68 (142)
                      ||+.|+|||++.+. ..++.++||||+||++|+|++|..||.+.. ......+......        +........   .
T Consensus       197 gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (389)
T 3gni_B          197 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSV  276 (389)
T ss_dssp             TTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------------------------
T ss_pred             ccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccc
Confidence            67789999997653 578999999999999999999999997652 2222221110000        000000000   0


Q ss_pred             chHHHhhcC------CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           69 YISELLHSL------PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        69 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      .........      +.............++.++.+||.+||..||++|||++++++||||+++...
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~~  343 (389)
T 3gni_B          277 ANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRR  343 (389)
T ss_dssp             -----------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC---
T ss_pred             cccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhhc
Confidence            000000000      0001111122345578899999999999999999999999999999976543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.87  E-value=9.6e-22  Score=133.04  Aligned_cols=90  Identities=17%  Similarity=0.266  Sum_probs=69.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|||||++. ...++.++|||||||++|||++ |+.||.+.....+...+.....++                    
T Consensus       222 gt~~ymAPE~~~-~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~--------------------  280 (329)
T 4aoj_A          222 LPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE--------------------  280 (329)
T ss_dssp             CCGGGCCHHHHT-TCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCC--------------------
T ss_pred             ccccccChhhhc-CCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCC--------------------
Confidence            788999999955 4589999999999999999998 899998765544433332211111                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....++.++.+|+.+||..||++|||++++++
T Consensus       281 -------~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~  312 (329)
T 4aoj_A          281 -------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHA  312 (329)
T ss_dssp             -------CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred             -------CcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence                   01237889999999999999999999999874

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.87  E-value=1.2e-22  Score=136.33  Aligned_cols=126  Identities=27%  Similarity=0.426  Sum_probs=85.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCc-cchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGA-NYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (142)
                      +|..|+|||++.+...++.++|+||+|+++|+|++|+.||.+... .....+............... .....+......
T Consensus       186 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (320)
T 2i6l_A          186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMT  265 (320)
T ss_dssp             SCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTT
T ss_pred             ccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCccccccccc
Confidence            477899999977666899999999999999999999999987743 333334333222111100000 000011111112


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ............++.++++||.+||..||++||+++++++||||....
T Consensus       266 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          266 EPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             SCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred             CCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence            223344455667899999999999999999999999999999998654

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.87  E-value=1.2e-21  Score=132.54  Aligned_cols=101  Identities=20%  Similarity=0.166  Sum_probs=77.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+|+++|+|++|..||.+.........+.....                       
T Consensus       179 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~-----------------------  234 (326)
T 2y0a_A          179 GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-----------------------  234 (326)
T ss_dssp             SCTTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC-----------------------
T ss_pred             CCcCcCCceeec-CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC-----------------------
Confidence            788999999954 45899999999999999999999999976644333222221110                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                       ......+...+.++.+||.+||..||++|||++++++||||....
T Consensus       235 -~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          235 -EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             -CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             -CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence             001123345788999999999999999999999999999998643

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.87  E-value=1e-22  Score=137.80  Aligned_cols=125  Identities=29%  Similarity=0.377  Sum_probs=86.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHh-hcCC-
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELL-HSLP-   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-   78 (142)
                      ||..|+|||++.+...++.++||||+|+++|+|++|..||.... ......+....+...+...........+. ...+ 
T Consensus       186 ~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (331)
T 4aaa_A          186 ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPE  265 (331)
T ss_dssp             CCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCC
T ss_pred             CCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCcc
Confidence            67889999997666678999999999999999999999998773 34445555444432221100000000000 0011 


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                      .............++.++.+||.+||..||++|||++++++||||+..
T Consensus       266 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          266 IKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             CSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             ccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence            112233344556789999999999999999999999999999999864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.86  E-value=9.2e-22  Score=130.32  Aligned_cols=110  Identities=23%  Similarity=0.291  Sum_probs=81.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+|+++++|++|..||...........+.......+.                   
T Consensus       169 ~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------  228 (284)
T 3kk8_A          169 GTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS-------------------  228 (284)
T ss_dssp             SCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT-------------------
T ss_pred             CCcCCcCchhhc-CCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCc-------------------
Confidence            678899999954 447899999999999999999999999776554443333221111000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcccccccc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKT  136 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~~~~~  136 (142)
                           .....++.++.+|+.+||..||++||+++++++||||.+.........++
T Consensus       229 -----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~~~~~~  278 (284)
T 3kk8_A          229 -----PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQ  278 (284)
T ss_dssp             -----TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCGGGSCCCC
T ss_pred             -----hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhHHhHhhcC
Confidence                 01134788899999999999999999999999999999765544443333

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.86  E-value=1.3e-21  Score=131.97  Aligned_cols=96  Identities=19%  Similarity=0.148  Sum_probs=75.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||.+.........+......                      
T Consensus       165 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----------------------  221 (318)
T 1fot_A          165 GTPDYIAPEVVS-TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELR----------------------  221 (318)
T ss_dssp             SCTTTCCHHHHT-TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCC----------------------
T ss_pred             CCccccCHhHhc-CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC----------------------
Confidence            789999999954 458899999999999999999999999766443332222111100                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                            ....++.++.+||.+||..||++|+     +++++++||||..+
T Consensus       222 ------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          222 ------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             ------CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             ------CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence                  0123678999999999999999999     89999999999864

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.86  E-value=4.5e-22  Score=135.13  Aligned_cols=103  Identities=21%  Similarity=0.226  Sum_probs=78.2

Q ss_pred             ccCcccchhhhcCC-CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH-HHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICS-SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~-~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|+|||++.+. ..++.++||||+|+++|+|++|+.||.+..... ...+.........                  
T Consensus       236 gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~------------------  297 (345)
T 3hko_A          236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFEN------------------  297 (345)
T ss_dssp             CCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTS------------------
T ss_pred             CCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCC------------------
Confidence            68889999996542 578999999999999999999999997664432 2333221110000                  


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                             .....++.++.+||.+||..||.+||++.++++||||++..++
T Consensus       298 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~~  340 (345)
T 3hko_A          298 -------PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDK  340 (345)
T ss_dssp             -------GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSSC
T ss_pred             -------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChHh
Confidence                   1113368899999999999999999999999999999987643

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.86  E-value=4.5e-22  Score=135.57  Aligned_cols=96  Identities=22%  Similarity=0.307  Sum_probs=76.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.+.........+.......                     
T Consensus       180 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~---------------------  237 (345)
T 1xjd_A          180 GTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY---------------------  237 (345)
T ss_dssp             SCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC---------------------
T ss_pred             CCcccCChhhhcC-CCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCC---------------------
Confidence            7899999999654 478999999999999999999999998775544433332211100                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHH-HHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN-DALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~-~~l~~~~~~~~  126 (142)
                             ...++.++++||.+||..||++||++. ++++||||..+
T Consensus       238 -------p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          238 -------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             -------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             -------CcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence                   123678999999999999999999998 99999999865

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.86  E-value=1.9e-21  Score=131.19  Aligned_cols=101  Identities=27%  Similarity=0.334  Sum_probs=76.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+|+++++|++|..||...........+.....+...                   
T Consensus       203 gt~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------  262 (321)
T 2c30_A          203 GTPYWMAPEVIS-RSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLK-------------------  262 (321)
T ss_dssp             SCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCT-------------------
T ss_pred             CCccccCHhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcC-------------------
Confidence            688999999954 447899999999999999999999999766443332222211110000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                            .....+.++.+|+.+||..||++||+++++++||||.+...
T Consensus       263 ------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~  303 (321)
T 2c30_A          263 ------NSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGL  303 (321)
T ss_dssp             ------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCCC
T ss_pred             ------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCCC
Confidence                  01236788999999999999999999999999999986543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.86  E-value=1.7e-22  Score=138.47  Aligned_cols=128  Identities=21%  Similarity=0.369  Sum_probs=82.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-------hhHHHHHHHHhCCCCCCCCCCccchHHHh
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-------KDHLSLIVRLFGNPTKETWPGANYISELL   74 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (142)
                      ||+.|+|||++.+. .++.++||||+|+++|+|++|..||....       ...+..+...++..+............+.
T Consensus       197 ~t~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  275 (373)
T 1q8y_A          197 QTREYRSPEVLLGA-PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFF  275 (373)
T ss_dssp             SCGGGCCHHHHHTC-CCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHB
T ss_pred             CCccccCcHHHhCC-CCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhc
Confidence            68899999996654 78999999999999999999999997542       23455566666654432211111111110


Q ss_pred             ------hcCCCCCCchhHhh-------hcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           75 ------HSLPQCEPADLAEK-------THGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        75 ------~~~~~~~~~~~~~~-------~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                            ..+...........       ....+.++.+||.+||..||++|||++++++||||.+.....
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~  344 (373)
T 1q8y_A          276 NSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGME  344 (373)
T ss_dssp             CC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTCT
T ss_pred             CCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccCcc
Confidence                  01111111111110       122456788999999999999999999999999999765443

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.86  E-value=1.2e-21  Score=132.37  Aligned_cols=100  Identities=21%  Similarity=0.248  Sum_probs=74.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh-HHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD-HLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+...++.++||||+|+++|+|++|..||...... .............                    
T Consensus       169 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--------------------  228 (323)
T 3tki_A          169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL--------------------  228 (323)
T ss_dssp             SCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTS--------------------
T ss_pred             cCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccC--------------------
Confidence            6889999999766645688999999999999999999999765322 2111111100000                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                            .....++.++.+||.+||..||++|||++++++||||....
T Consensus       229 ------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          229 ------NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             ------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             ------CccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence                  00133788899999999999999999999999999998643

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.86  E-value=1.2e-22  Score=140.07  Aligned_cols=123  Identities=28%  Similarity=0.432  Sum_probs=79.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-------hhHHHHHHHHhCCCCCCCCCCccchHHHh
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-------KDHLSLIVRLFGNPTKETWPGANYISELL   74 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (142)
                      ||+.|+|||++.+. .++.++||||+||++|+|++|..||....       ...+..+....+..+............+.
T Consensus       255 gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  333 (397)
T 1wak_A          255 QTRQYRSLEVLIGS-GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFF  333 (397)
T ss_dssp             SCGGGCCHHHHHTS-CCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTB
T ss_pred             CCCcccCChhhcCC-CCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccccccc
Confidence            68899999996654 79999999999999999999999997542       23455566666654332110000000000


Q ss_pred             ------hcCCCCCCchhHh-------hhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           75 ------HSLPQCEPADLAE-------KTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        75 ------~~~~~~~~~~~~~-------~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                            ..+..........       .....+.++.+||.+||..||++|||++++++||||++
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          334 TKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             CTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             CCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence                  0000101100000       01123456789999999999999999999999999974

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.86  E-value=2.9e-21  Score=128.23  Aligned_cols=97  Identities=23%  Similarity=0.261  Sum_probs=74.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++ . ..++.++|+||+|+++++|++|..||.+....................                  
T Consensus       188 ~t~~y~aPE~~-~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~------------------  247 (285)
T 3is5_A          188 GTALYMAPEVF-K-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE------------------  247 (285)
T ss_dssp             TTGGGCCHHHH-T-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC-------------------
T ss_pred             cccCcCChHHh-c-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccc------------------
Confidence            68889999985 3 368899999999999999999999998765544433332211111000                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                             ....+.++.+|+.+||..||++||+++++++||||++
T Consensus       248 -------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          248 -------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             --------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             -------cCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence                   1226788999999999999999999999999999986

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.86  E-value=4.4e-22  Score=136.88  Aligned_cols=101  Identities=22%  Similarity=0.240  Sum_probs=78.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh-HHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD-HLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|..||.+.... .+..+.......+                    
T Consensus       250 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~--------------------  308 (373)
T 2x4f_A          250 GTPEFLAPEVVN-YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE--------------------  308 (373)
T ss_dssp             SSCTTCCHHHHT-TCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSC--------------------
T ss_pred             CCCcEeChhhcc-CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC--------------------
Confidence            788999999954 457899999999999999999999999876443 3333332111000                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                           ...+..++.++.+||.+||..||.+||+++++++||||.+...
T Consensus       309 -----~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~~  351 (373)
T 2x4f_A          309 -----DEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKL  351 (373)
T ss_dssp             -----SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHHH
T ss_pred             -----hhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCch
Confidence                 0112457889999999999999999999999999999997643

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.86  E-value=3.1e-22  Score=136.57  Aligned_cols=100  Identities=26%  Similarity=0.263  Sum_probs=76.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|..||.+........+.....                        
T Consensus       195 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~------------------------  249 (351)
T 3c0i_A          195 GTPHFMAPEVVK-REPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKY------------------------  249 (351)
T ss_dssp             SCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCC------------------------
T ss_pred             CCcCccCHHHHc-CCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCC------------------------
Confidence            788999999955 4478999999999999999999999997653333332222100                        


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                       ......+..++.++++||.+||..||++||++.++++||||....
T Consensus       250 -~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~  294 (351)
T 3c0i_A          250 -KMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERD  294 (351)
T ss_dssp             -CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHH
T ss_pred             -CCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCc
Confidence             000122345788999999999999999999999999999998643

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.86  E-value=1.4e-21  Score=132.14  Aligned_cols=101  Identities=19%  Similarity=0.213  Sum_probs=77.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+|+++|+|++|..||...........+.........                   
T Consensus       195 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-------------------  254 (327)
T 3lm5_A          195 GTPEYLAPEILN-YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSE-------------------  254 (327)
T ss_dssp             CCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT-------------------
T ss_pred             CCcCccCCeeec-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCc-------------------
Confidence            688999999954 458899999999999999999999999876544333322222111110                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                           .....++.++.+||.+||..||.+|||++++++||||++..
T Consensus       255 -----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~  295 (327)
T 3lm5_A          255 -----ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD  295 (327)
T ss_dssp             -----TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred             -----hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence                 11234788899999999999999999999999999998753

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.86  E-value=1.8e-21  Score=132.96  Aligned_cols=96  Identities=20%  Similarity=0.253  Sum_probs=75.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||.+.....+...+......                      
T Consensus       183 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~----------------------  239 (353)
T 2i0e_A          183 GTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA----------------------  239 (353)
T ss_dssp             SCGGGCCHHHHT-TCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC----------------------
T ss_pred             CCccccChhhhc-CCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC----------------------
Confidence            789999999955 458899999999999999999999999876554433322211100                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~  126 (142)
                            ....++.++.+||.+||..||.+|++     ++++++||||..+
T Consensus       240 ------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          240 ------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  283 (353)
T ss_dssp             ------CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred             ------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence                  01237889999999999999999994     6999999999854

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.86  E-value=2.5e-22  Score=135.71  Aligned_cols=125  Identities=24%  Similarity=0.383  Sum_probs=80.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCC----------------
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW----------------   64 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------------   64 (142)
                      ||+.|+|||++.+ ..++.++|+||+||++|+|++|..||..... .....+....+..+....                
T Consensus       196 gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  274 (339)
T 1z57_A          196 STRHYRAPEVILA-LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDW  274 (339)
T ss_dssp             SCGGGCCHHHHTT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECC
T ss_pred             CCccccChHHhhC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccc
Confidence            6889999999654 4789999999999999999999999987644 334444454443332210                


Q ss_pred             CCccchHHHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                      ............... ............+.++.+||.+||..||++|||++++++||||+.+..
T Consensus       275 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  337 (339)
T 1z57_A          275 DEHSSAGRYVSRACK-PLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK  337 (339)
T ss_dssp             CTTSHHHHHHHHHCC-CGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred             cccccccchhhhcCc-chhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence            000000000000000 000000000113456789999999999999999999999999998754

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.86  E-value=2.9e-21  Score=133.39  Aligned_cols=100  Identities=19%  Similarity=0.196  Sum_probs=76.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|..||.+.........+........                    
T Consensus       212 gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~--------------------  270 (387)
T 1kob_A          212 ATAEFAAPEIVD-REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD--------------------  270 (387)
T ss_dssp             SSGGGCCHHHHT-TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCC--------------------
T ss_pred             cCCCccCchhcc-CCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--------------------
Confidence            789999999954 45789999999999999999999999987644333222221111000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                          ...+..++.++.+||.+||..||++|||+.++++||||...
T Consensus       271 ----~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  311 (387)
T 1kob_A          271 ----EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  311 (387)
T ss_dssp             ----SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             ----ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCC
Confidence                01123478899999999999999999999999999999864

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=6.6e-22  Score=133.51  Aligned_cols=101  Identities=19%  Similarity=0.243  Sum_probs=77.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+|+++|+|++|..||.+.........+.....                       
T Consensus       165 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~-----------------------  220 (321)
T 1tki_A          165 TAPEYYAPEVHQ-HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY-----------------------  220 (321)
T ss_dssp             SCGGGSCHHHHT-TCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC-----------------------
T ss_pred             CChhhcCcHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCC-----------------------
Confidence            688999999954 44789999999999999999999999987644433222221110                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                       ......+..++.++.+|+.+||..||.+|||+.++++||||.+..
T Consensus       221 -~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  265 (321)
T 1tki_A          221 -TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             -CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred             -CCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence             001122355889999999999999999999999999999998653

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.86  E-value=1.6e-21  Score=133.05  Aligned_cols=101  Identities=23%  Similarity=0.241  Sum_probs=75.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH-H-HHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-L-SLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|..||....... . ..+... ....                   
T Consensus       212 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~-~~~~-------------------  270 (349)
T 2w4o_A          212 GTPGYCAPEILR-GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC-EYYF-------------------  270 (349)
T ss_dssp             -CGGGSCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTT-CCCC-------------------
T ss_pred             CCCCccCHHHhc-CCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhC-CCcc-------------------
Confidence            688999999965 4478999999999999999999999997653322 2 222211 1000                   


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                           ........+.++.+||.+||..||++||++.++++||||.....
T Consensus       271 -----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  314 (349)
T 2w4o_A          271 -----ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA  314 (349)
T ss_dssp             -----CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTC
T ss_pred             -----CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCcc
Confidence                 00112347889999999999999999999999999999987643

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.86  E-value=6.6e-22  Score=135.51  Aligned_cols=100  Identities=24%  Similarity=0.338  Sum_probs=76.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|..||.+.........+.......+                    
T Consensus       192 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~--------------------  250 (362)
T 2bdw_A          192 GTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP--------------------  250 (362)
T ss_dssp             SCTTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC--------------------
T ss_pred             CCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC--------------------
Confidence            789999999954 44899999999999999999999999987654443333222111000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                          ...+..++.++.+||.+||..||++||++.++++||||...
T Consensus       251 ----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  291 (362)
T 2bdw_A          251 ----SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR  291 (362)
T ss_dssp             ----TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred             ----cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence                01123478899999999999999999999999999999754

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.86  E-value=1.8e-21  Score=132.32  Aligned_cols=126  Identities=21%  Similarity=0.338  Sum_probs=82.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCc-------------
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGA-------------   67 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------   67 (142)
                      ||+.|+|||++.+ ..++.++|+||+||++|+|++|..||..... .....+....+..+.......             
T Consensus       201 gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  279 (355)
T 2eu9_A          201 ATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVW  279 (355)
T ss_dssp             SCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECC
T ss_pred             CCCcccCCeeeec-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhccccccc
Confidence            6889999999654 4789999999999999999999999987743 444555555554433211100             


Q ss_pred             ---cchHHHhh-cCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           68 ---NYISELLH-SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        68 ---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                         ........ .....  ..........+.++.+||.+||..||++|||++++++||||..+....
T Consensus       280 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~  344 (355)
T 2eu9_A          280 DENSSDGRYVKENCKPL--KSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEE  344 (355)
T ss_dssp             CTTSHHHHHHHHHCCCG--GGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCHHH
T ss_pred             ccccchhccccccCCcc--cccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCChhh
Confidence               00000000 00000  000000011234778999999999999999999999999999875443

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.85  E-value=2.2e-21  Score=130.80  Aligned_cols=103  Identities=17%  Similarity=0.120  Sum_probs=78.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+|+++|+|++|..||.+.........+.....                       
T Consensus       180 gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-----------------------  235 (321)
T 2a2a_A          180 GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY-----------------------  235 (321)
T ss_dssp             SCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC-----------------------
T ss_pred             CCCCccCccccc-CCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc-----------------------
Confidence            688999999954 45789999999999999999999999976644333222211110                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                       ..........+.++.+||.+||..||++|||++++++||||..+...
T Consensus       236 -~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~~~  282 (321)
T 2a2a_A          236 -DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQ  282 (321)
T ss_dssp             -CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSSHH
T ss_pred             -ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCCcc
Confidence             00112234578899999999999999999999999999999876433

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.85  E-value=8.9e-22  Score=134.81  Aligned_cols=102  Identities=19%  Similarity=0.216  Sum_probs=69.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+....+.++||||+||++|+|++|+.||.+... ......+..........              +  
T Consensus       179 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--------------~--  242 (361)
T 3uc3_A          179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSI--------------P--  242 (361)
T ss_dssp             --CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCC--------------C--
T ss_pred             CCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCC--------------C--
Confidence            789999999976664445569999999999999999999976521 11212111111000000              0  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                             ....++.++.+||.+||..||++|||+.++++||||...
T Consensus       243 -------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          243 -------DDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             -------TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             -------CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence                   012367889999999999999999999999999999643

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.85  E-value=3.2e-22  Score=136.12  Aligned_cols=100  Identities=21%  Similarity=0.274  Sum_probs=74.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh---hHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK---DHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.....   ..+...+........                 
T Consensus       182 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~-----------------  243 (342)
T 2qr7_A          182 YTANFVAPEVLER-QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLS-----------------  243 (342)
T ss_dssp             CCSSCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCC-----------------
T ss_pred             CCccccCHHHhcC-CCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccC-----------------
Confidence            6889999999654 3688999999999999999999999975422   222221211110000                 


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                             ...+..++.++++||.+||..||++||+++++++||||.+.
T Consensus       244 -------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          244 -------GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             -------STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred             -------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence                   01123478899999999999999999999999999999764

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.85  E-value=2.2e-21  Score=137.01  Aligned_cols=97  Identities=25%  Similarity=0.173  Sum_probs=75.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+....+.++|+||+||++|+|++|..||.+.........+.......                     
T Consensus       177 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------------------  235 (476)
T 2y94_A          177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYT---------------------  235 (476)
T ss_dssp             SCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCC---------------------
T ss_pred             CCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCC---------------------
Confidence            78999999997665455789999999999999999999998664433322222111000                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                             ...++.++.+||.+||..||++|||++++++||||...
T Consensus       236 -------p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          236 -------PQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             -------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             -------CccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence                   12367889999999999999999999999999999864

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.85  E-value=1.4e-22  Score=137.70  Aligned_cols=97  Identities=22%  Similarity=0.207  Sum_probs=72.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+....+.++||||+|+++|+|++|..||.........      .                  .+....
T Consensus       169 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~------~------------------~i~~~~  224 (336)
T 3h4j_B          169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF------K------------------KVNSCV  224 (336)
T ss_dssp             TSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB------C------------------CCCSSC
T ss_pred             CCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH------H------------------HHHcCC
Confidence            7899999999665544578999999999999999999999644211100      0                  000000


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                          .......+.++.+||.+||..||.+|||++++++||||...
T Consensus       225 ----~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          225 ----YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             ----CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             ----CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence                01113378889999999999999999999999999999854

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.85  E-value=3.2e-21  Score=131.58  Aligned_cols=96  Identities=21%  Similarity=0.161  Sum_probs=76.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.+.........+......                      
T Consensus       200 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~----------------------  256 (350)
T 1rdq_E          200 GTPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR----------------------  256 (350)
T ss_dssp             ECGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC----------------------
T ss_pred             CCccccCHHHhcC-CCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCC----------------------
Confidence            6889999999654 47899999999999999999999999876554443322211100                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~  126 (142)
                            ....++.++.+||.+||..||.+|++     ++++++||||..+
T Consensus       257 ------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          257 ------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             ------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             ------CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence                  01236889999999999999999998     9999999999864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.85  E-value=3e-21  Score=133.60  Aligned_cols=96  Identities=23%  Similarity=0.240  Sum_probs=72.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh---------hHHHHHHHHhCCCCCCCCCCccchHH
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK---------DHLSLIVRLFGNPTKETWPGANYISE   72 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (142)
                      ||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.....         ..+...+.....              
T Consensus       215 gt~~Y~aPE~l~~-~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--------------  279 (396)
T 4dc2_A          215 GTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--------------  279 (396)
T ss_dssp             BCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC--------------
T ss_pred             CCcccCCchhhcC-CCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc--------------
Confidence            7899999999654 4899999999999999999999999964311         111111111000              


Q ss_pred             HhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCH------HHHhcCCCccch
Q 048170           73 LLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA------NDALCIGTSEKL  126 (142)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~------~~~l~~~~~~~~  126 (142)
                                    .....++.++++||.+||..||++|+++      +++++||||+.+
T Consensus       280 --------------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          280 --------------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             --------------CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             --------------CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence                          0112378899999999999999999985      799999999865

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.85  E-value=4.3e-21  Score=129.79  Aligned_cols=95  Identities=20%  Similarity=0.288  Sum_probs=75.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+ ..++.++|+||+|+++|+|++|..||.+...... ..+... ...                     
T Consensus       183 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~-~~~---------------------  239 (327)
T 3a62_A          183 GTIEYMAPEILMR-SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC-KLN---------------------  239 (327)
T ss_dssp             SCCTTSCHHHHTT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-CCC---------------------
T ss_pred             CCcCccCHhhCcC-CCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC-CCC---------------------
Confidence            7899999999654 4789999999999999999999999987644333 222221 100                     


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                             ....++.++++||.+||..||++||     +++++++||||..+
T Consensus       240 -------~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          240 -------LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             -------CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             -------CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence                   0123678899999999999999999     89999999999865

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.85  E-value=2.8e-21  Score=128.25  Aligned_cols=101  Identities=18%  Similarity=0.171  Sum_probs=74.5

Q ss_pred             ccCcccchhhh---cCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh--hHHHHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESR---ICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~---~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      ||+.|+|||++   .....++.++|+||+|+++++|++|..||.....  ...........  +...             
T Consensus       171 ~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~-------------  235 (290)
T 3fme_A          171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS--PQLP-------------  235 (290)
T ss_dssp             CCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC--CCCC-------------
T ss_pred             CCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC--CCcc-------------
Confidence            68899999996   3455789999999999999999999999975422  22222222110  0000             


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                                  ...++.++.+|+.+||..||++|||++++++||||......
T Consensus       236 ------------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~~~  276 (290)
T 3fme_A          236 ------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESK  276 (290)
T ss_dssp             ------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHHS
T ss_pred             ------------cccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCccc
Confidence                        02367889999999999999999999999999999865443

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.85  E-value=2.4e-21  Score=128.14  Aligned_cols=99  Identities=17%  Similarity=0.208  Sum_probs=77.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||.+. ...++.++|+||+|+++++|++|..||...........+.......+                    
T Consensus       169 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  227 (279)
T 3fdn_A          169 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--------------------  227 (279)
T ss_dssp             CCCTTCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC--------------------
T ss_pred             CCCCccCHhHhc-cCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC--------------------
Confidence            688999999954 44788999999999999999999999987655444333332221111                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                              ...+.++.+||.+||..||++||++.++++||||......
T Consensus       228 --------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~~  267 (279)
T 3fdn_A          228 --------DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK  267 (279)
T ss_dssp             --------TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCSS
T ss_pred             --------CcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCccC
Confidence                    2267789999999999999999999999999999975433

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.85  E-value=7.5e-22  Score=133.44  Aligned_cols=104  Identities=19%  Similarity=0.285  Sum_probs=64.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh----HHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD----HLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||+.|+|||++. ...++.++||||+|+++|+|++|..||......    ....+.....                    
T Consensus       171 ~t~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~--------------------  229 (325)
T 3kn6_A          171 FTLHYAAPELLN-QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK--------------------  229 (325)
T ss_dssp             --------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHT--------------------
T ss_pred             CCcCccCHHHhc-CCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHH--------------------
Confidence            578899999954 558999999999999999999999999754221    0111111111                    


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                       ..........+..++.++++||.+||..||++||+++++++||||.+..
T Consensus       230 -~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~  278 (325)
T 3kn6_A          230 -KGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGS  278 (325)
T ss_dssp             -TTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTC
T ss_pred             -cCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCc
Confidence             1111111122345889999999999999999999999999999998654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.85  E-value=2.9e-21  Score=141.32  Aligned_cols=96  Identities=20%  Similarity=0.255  Sum_probs=76.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+|+++|||++|..||.+.+...+...+......                      
T Consensus       504 GT~~Y~APE~l~-~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~----------------------  560 (674)
T 3pfq_A          504 GTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA----------------------  560 (674)
T ss_dssp             SCSSSCCHHHHT-CCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCC----------------------
T ss_pred             CCCcccCHhhhc-CCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC----------------------
Confidence            789999999954 458999999999999999999999999877554443332211100                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH-----HHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA-----NDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~-----~~~l~~~~~~~~  126 (142)
                            ....++.++.+||.+||..||++|+++     +++++||||+.+
T Consensus       561 ------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          561 ------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             ------CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred             ------CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence                  012378899999999999999999997     899999999865

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.85  E-value=4.1e-21  Score=130.83  Aligned_cols=96  Identities=23%  Similarity=0.240  Sum_probs=72.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh---------hHHHHHHHHhCCCCCCCCCCccchHH
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK---------DHLSLIVRLFGNPTKETWPGANYISE   72 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (142)
                      ||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.....         ..+...+.....              
T Consensus       172 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~--------------  236 (345)
T 3a8x_A          172 GTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--------------  236 (345)
T ss_dssp             SCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC--------------
T ss_pred             CCccccCccccCC-CCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC--------------
Confidence            7899999999654 4889999999999999999999999964311         111111110000              


Q ss_pred             HhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCH------HHHhcCCCccch
Q 048170           73 LLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA------NDALCIGTSEKL  126 (142)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~------~~~l~~~~~~~~  126 (142)
                                    .....++.++++||.+||..||++|+++      +++++||||..+
T Consensus       237 --------------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          237 --------------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             --------------CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             --------------CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence                          0112478899999999999999999995      799999999864

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.85  E-value=7e-22  Score=132.75  Aligned_cols=122  Identities=21%  Similarity=0.253  Sum_probs=73.3

Q ss_pred             ccCcccchhhhcC----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRIC----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||+.|+|||++.+    ...++.++||||+||++|+|++|..||.+......       .......  ...........+
T Consensus       183 gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-------~~~~~~~--~~~~~~~~~~~i  253 (316)
T 2ac3_A          183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC-------GWDRGEA--CPACQNMLFESI  253 (316)
T ss_dssp             CSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCS-------CC----C--CHHHHHHHHHHH
T ss_pred             CCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccc-------ccccccc--chhHHHHHHHHH
Confidence            7889999999653    13578899999999999999999999975521100       0000000  000000000000


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcccc
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHL  132 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~  132 (142)
                      ..............++.++++||.+||..||++||+++++++||||........+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~~~~  308 (316)
T 2ac3_A          254 QEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTL  308 (316)
T ss_dssp             HHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC--------
T ss_pred             hccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCCcccC
Confidence            0000011112234578899999999999999999999999999999976544333

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.85  E-value=2e-21  Score=137.85  Aligned_cols=101  Identities=23%  Similarity=0.292  Sum_probs=78.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.  ..++.++||||+||++|+|++|..||.+.........+........                    
T Consensus       200 gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--------------------  257 (494)
T 3lij_A          200 GTAYYIAPEVLR--KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD--------------------  257 (494)
T ss_dssp             SCTTTCCHHHHT--TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC--------------------
T ss_pred             CCcCeeCHHHHc--ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--------------------
Confidence            789999999953  3689999999999999999999999987755443333322111000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                          ...+..++.++++||.+||..||.+|||+.++++||||.....
T Consensus       258 ----~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~  300 (494)
T 3lij_A          258 ----SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCS  300 (494)
T ss_dssp             ----SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHH
T ss_pred             ----chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcc
Confidence                0112457889999999999999999999999999999987643

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.85  E-value=6.8e-21  Score=125.62  Aligned_cols=100  Identities=22%  Similarity=0.276  Sum_probs=74.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh--HHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD--HLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||..|+|||++.+...++.++|+||+|+++++|++|..||......  ....+... .   ..                 
T Consensus       169 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~---~~-----------------  227 (276)
T 2yex_A          169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK-K---TY-----------------  227 (276)
T ss_dssp             SCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT-C---TT-----------------
T ss_pred             cccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc-c---cc-----------------
Confidence            6788999999665544578999999999999999999999765321  21111110 0   00                 


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                            .......+.++.+||.+||..||++|||++++++||||.+...
T Consensus       228 ------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          228 ------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             ------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             ------cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence                  0011336888999999999999999999999999999987643

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.85  E-value=3.4e-21  Score=128.49  Aligned_cols=110  Identities=19%  Similarity=0.135  Sum_probs=74.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+...++.++|+||+|+++++|++|..||.............  ....... .               .
T Consensus       188 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~-~---------------~  249 (303)
T 2vwi_A          188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL--QNDPPSL-E---------------T  249 (303)
T ss_dssp             CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHH--TSSCCCT-T---------------C
T ss_pred             CCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHh--ccCCCcc-c---------------c
Confidence            67889999996654578999999999999999999999997663322211111  1100000 0               0


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ...........+.++.+|+.+||..||.+||++.++++||||.....+
T Consensus       250 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~  297 (303)
T 2vwi_A          250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNK  297 (303)
T ss_dssp             -----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC------
T ss_pred             ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCCC
Confidence            000112234577889999999999999999999999999999987654

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.85  E-value=1.3e-21  Score=138.41  Aligned_cols=100  Identities=25%  Similarity=0.267  Sum_probs=77.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+  .++.++||||+||++|+|++|..||.+.........+........                    
T Consensus       190 gt~~y~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--------------------  247 (484)
T 3nyv_A          190 GTAYYIAPEVLHG--TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE--------------------  247 (484)
T ss_dssp             TGGGTCCHHHHHT--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--------------------
T ss_pred             CCccccCceeecC--CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC--------------------
Confidence            7899999999643  689999999999999999999999987755443333222111000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                          ...+..++.++++||.+||..||++|||+.++++||||....
T Consensus       248 ----~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          248 ----LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             ----SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred             ----CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence                011234788999999999999999999999999999998754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.85  E-value=2.2e-21  Score=137.34  Aligned_cols=100  Identities=24%  Similarity=0.275  Sum_probs=76.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. + .++.++||||+||++|+|++|..||.+.........+........                    
T Consensus       185 gt~~y~aPE~~~-~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--------------------  242 (486)
T 3mwu_A          185 GTAYYIAPEVLR-G-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD--------------------  242 (486)
T ss_dssp             TGGGGCCGGGGG-S-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSC--------------------
T ss_pred             CCCCCCCHHHhC-C-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--------------------
Confidence            789999999964 3 589999999999999999999999987754433332222111000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                          ...+..++.++++||.+||..||++|||+.++++||||....
T Consensus       243 ----~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~  284 (486)
T 3mwu_A          243 ----LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (486)
T ss_dssp             ----SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred             ----CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence                011234788999999999999999999999999999998654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.84  E-value=8.9e-21  Score=126.85  Aligned_cols=101  Identities=21%  Similarity=0.223  Sum_probs=76.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+|+++|+|++|..||...........+........                    
T Consensus       169 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~--------------------  227 (304)
T 2jam_A          169 GTPGYVAPEVLA-QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFE--------------------  227 (304)
T ss_dssp             SCCCBCCTTTBS-SCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCC--------------------
T ss_pred             CCCCccChHHhc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC--------------------
Confidence            688999999954 55899999999999999999999999976644433222221110000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                          .......+.++.+||.+||..||++||+++++++||||....
T Consensus       228 ----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          228 ----SPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             ----TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred             ----ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence                011234788999999999999999999999999999998643

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.84  E-value=4.4e-21  Score=133.00  Aligned_cols=100  Identities=20%  Similarity=0.243  Sum_probs=73.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh-----HHHHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD-----HLSLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      ||+.|+|||++ ....++.++||||+||++|+|++|..||.+....     ....+ ......                 
T Consensus       225 gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i-~~~~~~-----------------  285 (400)
T 1nxk_A          225 YTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYE-----------------  285 (400)
T ss_dssp             --CTTCCGGGS-CCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH-HHTCCC-----------------
T ss_pred             CCCCccCHhhc-CCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH-HcCccc-----------------
Confidence            68899999995 4558999999999999999999999999655221     11111 110000                 


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ++       ...+..++.++.+||.+||..||++|||++++++||||....
T Consensus       286 ~~-------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          286 FP-------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             CC-------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             CC-------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence            00       011234788999999999999999999999999999998643

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.84  E-value=3.3e-21  Score=132.95  Aligned_cols=100  Identities=22%  Similarity=0.306  Sum_probs=74.4

Q ss_pred             ccCcccchhhhcC--CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRIC--SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~--~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|+|||++.+  ...++.++|+||+||++|+|++|..||..........+..........                 
T Consensus       176 gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~-----------------  238 (384)
T 4fr4_A          176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT-----------------  238 (384)
T ss_dssp             SCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC-----------------
T ss_pred             CCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccC-----------------
Confidence            7899999999654  335889999999999999999999999755322222222111100000                 


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCC-HHHHhcCCCccch
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-ANDALCIGTSEKL  126 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-~~~~l~~~~~~~~  126 (142)
                              ....++.++.+||.+||..||.+|++ ++++++||||..+
T Consensus       239 --------~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          239 --------YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             --------CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred             --------CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence                    01236789999999999999999998 8999999999865

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.84  E-value=1.7e-21  Score=135.74  Aligned_cols=102  Identities=23%  Similarity=0.263  Sum_probs=74.3

Q ss_pred             ccCcccchhhhcC--CCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRIC--SSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~--~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+  ...++.++|+||+||++|+|++|..||... ........+....                     
T Consensus       303 gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~---------------------  361 (419)
T 3i6u_A          303 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK---------------------  361 (419)
T ss_dssp             --CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTC---------------------
T ss_pred             CCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCC---------------------
Confidence            6889999999653  357889999999999999999999999754 2212211111100                     


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                         .......+..++.++.+||.+||..||++||+++++++||||.+..
T Consensus       362 ---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  407 (419)
T 3i6u_A          362 ---YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED  407 (419)
T ss_dssp             ---CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHH
T ss_pred             ---CCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChh
Confidence               0111233455888999999999999999999999999999998653

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.84  E-value=7.2e-21  Score=126.48  Aligned_cols=97  Identities=19%  Similarity=0.115  Sum_probs=72.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++. . .++.++|+||+|+++++|++|..||... ........+.....                      
T Consensus       192 ~t~~y~aPE~~~-~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~----------------------  247 (290)
T 1t4h_A          192 GTPEFMAPEMYE-E-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----------------------  247 (290)
T ss_dssp             SSCCCCCGGGGG-T-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC----------------------
T ss_pred             CCcCcCCHHHHh-c-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCC----------------------
Confidence            688999999853 3 6899999999999999999999999765 33332222211000                      


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                          ........+.++.+||.+||..||++||+++++++||||++.
T Consensus       248 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          248 ----PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             ----CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             ----ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence                001123366789999999999999999999999999999863

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.84  E-value=1.5e-20  Score=125.51  Aligned_cols=102  Identities=19%  Similarity=0.162  Sum_probs=76.4

Q ss_pred             ccCcccchhhhc----CCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRI----CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~----~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||..|+|||++.    ....++.++|+||+|+++++|++|..||...........+.....+. ..              
T Consensus       179 ~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~--------------  243 (302)
T 2j7t_A          179 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPT-LL--------------  243 (302)
T ss_dssp             CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC-CS--------------
T ss_pred             CChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcc-cC--------------
Confidence            688899999964    35578899999999999999999999997664433222111111100 00              


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                                ....++.++.+|+.+||..||++||+++++++||||.....
T Consensus       244 ----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  284 (302)
T 2j7t_A          244 ----------TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITS  284 (302)
T ss_dssp             ----------SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCC
T ss_pred             ----------CccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhcc
Confidence                      01236778999999999999999999999999999997654

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.84  E-value=1.1e-21  Score=134.58  Aligned_cols=109  Identities=15%  Similarity=0.111  Sum_probs=75.9

Q ss_pred             ccCcccchhhhcCC-CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICS-SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~-~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|+.|+|||++.+. ..++.++||||+||++|+|++|+.||.........            .+....    .   ....
T Consensus       253 ~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~------------~~~~~~----~---~~~~  313 (371)
T 3q60_A          253 VPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKG------------SWKRPS----L---RVPG  313 (371)
T ss_dssp             SCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTT------------CCCBCC----T---TSCC
T ss_pred             CCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCccccc------------chhhhh----h---hhcc
Confidence            56889999996542 47899999999999999999999999654221000            000000    0   0000


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ...........++.++.+||.+||..||++|||+.++++||||.++...
T Consensus       314 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~  362 (371)
T 3q60_A          314 TDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNE  362 (371)
T ss_dssp             CCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHH
T ss_pred             ccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHH
Confidence            0000011124578899999999999999999999999999999987544

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.84  E-value=4e-21  Score=132.78  Aligned_cols=100  Identities=22%  Similarity=0.269  Sum_probs=71.9

Q ss_pred             ccCcccchhhhcC----------CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchH
Q 048170            2 VEFPYKAPESRIC----------SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYIS   71 (142)
Q Consensus         2 ~t~~y~~PE~~~~----------~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (142)
                      ||+.|+|||++.+          ...++.++||||+||++|+|++|..||...... ...+............       
T Consensus       218 gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-~~~~~~~~~~~~~~~~-------  289 (390)
T 2zmd_A          218 GAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-ISKLHAIIDPNHEIEF-------  289 (390)
T ss_dssp             CCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-HHHHHHHHCTTSCCCC-------
T ss_pred             cCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-HHHHHHHhCccccCCC-------
Confidence            7899999999754          236889999999999999999999999754221 1111122111111100       


Q ss_pred             HHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           72 ELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                                       ....+.++.+||.+||..||++||++.++++||||...
T Consensus       290 -----------------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          290 -----------------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             -----------------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             -----------------CccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence                             11246688999999999999999999999999999753

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.84  E-value=6e-21  Score=125.94  Aligned_cols=98  Identities=24%  Similarity=0.149  Sum_probs=71.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||.+.+....+.++|+||+|+++++|++|..||...........+.......                     
T Consensus       172 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------  230 (276)
T 2h6d_A          172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI---------------------  230 (276)
T ss_dssp             -----CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC---------------------
T ss_pred             CCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccC---------------------
Confidence            57889999996655445789999999999999999999997664444333222111000                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                             ....+.++.+++.+||..||++||+++++++||||++..
T Consensus       231 -------~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          231 -------PEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL  269 (276)
T ss_dssp             -------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             -------chhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence                   123677899999999999999999999999999998654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.84  E-value=6.1e-21  Score=126.48  Aligned_cols=98  Identities=16%  Similarity=0.180  Sum_probs=76.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++. ...++.++|+||+|+++++|++|..||...........+......                      
T Consensus       174 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~----------------------  230 (284)
T 2vgo_A          174 GTLDYLPPEMIE-GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK----------------------  230 (284)
T ss_dssp             SCGGGCCHHHHT-TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC----------------------
T ss_pred             CCCCcCCHHHhc-cCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccC----------------------
Confidence            678899999955 447889999999999999999999999766443332222211100                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                            .....+.++.+||.+||..||.+||+++++++||||+....
T Consensus       231 ------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          231 ------FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             ------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             ------CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence                  01236788999999999999999999999999999987543

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.84  E-value=1.3e-20  Score=129.26  Aligned_cols=100  Identities=25%  Similarity=0.305  Sum_probs=74.8

Q ss_pred             ccCcccchhhhcC-----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRIC-----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~-----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      ||+.|+|||++.+     ...++.++||||+|+++|+|++|..||...........+.....                  
T Consensus       261 gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~------------------  322 (365)
T 2y7j_A          261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQY------------------  322 (365)
T ss_dssp             SCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC------------------
T ss_pred             CCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC------------------
Confidence            6889999998653     23578899999999999999999999976644333222221110                  


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                            ......+...+.++.+||.+||..||++||+++++++||||+.
T Consensus       323 ------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          323 ------QFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             ------CCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             ------CCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence                  0001122457888999999999999999999999999999963

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.84  E-value=1.1e-20  Score=129.98  Aligned_cols=96  Identities=21%  Similarity=0.187  Sum_probs=75.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+||++|+|++|..||.+.........+.....   .                   
T Consensus       201 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~---~-------------------  257 (373)
T 2r5t_A          201 GTPEYLAPEVLH-KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL---Q-------------------  257 (373)
T ss_dssp             CCCCCCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCC---C-------------------
T ss_pred             CCccccCHHHhC-CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc---C-------------------
Confidence            789999999955 45899999999999999999999999987654443322221100   0                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCH----HHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTA----NDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~----~~~l~~~~~~~~  126 (142)
                            ....++.++++||.+||..||.+|+++    .++++|+||..+
T Consensus       258 ------~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          258 ------LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI  300 (373)
T ss_dssp             ------CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred             ------CCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence                  012378899999999999999999986    689999999864

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.84  E-value=8.8e-21  Score=128.94  Aligned_cols=99  Identities=22%  Similarity=0.277  Sum_probs=71.6

Q ss_pred             ccCcccchhhhcC----------CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchH
Q 048170            2 VEFPYKAPESRIC----------SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYIS   71 (142)
Q Consensus         2 ~t~~y~~PE~~~~----------~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (142)
                      ||+.|+|||++.+          ...++.++||||+||++|+|++|..||...... ...+............       
T Consensus       171 gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~-------  242 (343)
T 3dbq_A          171 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-ISKLHAIIDPNHEIEF-------  242 (343)
T ss_dssp             CCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-HHHHHHHHCTTSCCCC-------
T ss_pred             CCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH-HHHHHHHhcCCcccCC-------
Confidence            7899999999653          257889999999999999999999999754221 1112222221111111       


Q ss_pred             HHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           72 ELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                                       ....+.++.+|+.+||..||.+|||+.++++||||..
T Consensus       243 -----------------~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          243 -----------------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             -----------------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             -----------------cccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence                             1224567899999999999999999999999999974

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.84  E-value=7.7e-21  Score=129.61  Aligned_cols=98  Identities=19%  Similarity=0.146  Sum_probs=74.7

Q ss_pred             ccCcccchhhhcC--CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH-HHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRIC--SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~--~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+  ...++.++||||+|+++++|++|..||....... ...+.. ...+...                
T Consensus       212 gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~-~~~~~~~----------------  274 (348)
T 1u5q_A          212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPALQ----------------  274 (348)
T ss_dssp             SCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCC----------------
T ss_pred             CCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-cCCCCCC----------------
Confidence            7889999999753  4578999999999999999999999997664322 222222 1111000                


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                                ....+..+.+||.+||..||++|||++++++||||...
T Consensus       275 ----------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~  312 (348)
T 1u5q_A          275 ----------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  312 (348)
T ss_dssp             ----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             ----------CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence                      12367889999999999999999999999999999754

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.84  E-value=4.2e-21  Score=134.23  Aligned_cols=101  Identities=20%  Similarity=0.253  Sum_probs=71.5

Q ss_pred             ccCcccchhhhcC--CCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRIC--SSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~--~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+  ...++.++||||+||++|+|++ |..||..........+..   ........             
T Consensus       188 gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~---~~~~~~~~-------------  251 (432)
T 3p23_A          188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG---ACSLDCLH-------------  251 (432)
T ss_dssp             SCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTT---CCCCTTSC-------------
T ss_pred             CCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhc---cCCccccC-------------
Confidence            7899999999654  3467789999999999999999 888986553333322211   11111000             


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                         .      ....+..+.+||.+||..||++||+++++++||||+.+.
T Consensus       252 ---~------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~~  291 (432)
T 3p23_A          252 ---P------EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLE  291 (432)
T ss_dssp             ---T------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCHH
T ss_pred             ---c------cccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccChH
Confidence               0      001234578999999999999999999999999998754

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.84  E-value=4.8e-21  Score=130.89  Aligned_cols=125  Identities=18%  Similarity=0.233  Sum_probs=78.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCC-CCCccc-----------
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKET-WPGANY-----------   69 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----------   69 (142)
                      ||+.|+|||++. ...++.++||||+|+++|+|++|..||..........+........... .+....           
T Consensus       192 gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (360)
T 3eqc_A          192 GTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMD  270 (360)
T ss_dssp             CCCTTCCHHHHT-TCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------------
T ss_pred             CCCCeECHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccC
Confidence            688999999955 4489999999999999999999999998775544433322111100000 000000           


Q ss_pred             ------hHHHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           70 ------ISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        70 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                            .......+.......  .....++.++.+||.+||..||++|||++++++||||......
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  334 (360)
T 3eqc_A          271 SRPPMAIFELLDYIVNEPPPK--LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE  334 (360)
T ss_dssp             ---CCCHHHHHHHHHHSCCCC--CCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHHS
T ss_pred             CCCcccchhhhhHHhccCCCC--CCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchHh
Confidence                  000000000000000  0012367789999999999999999999999999999976543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.84  E-value=1.1e-20  Score=124.89  Aligned_cols=101  Identities=22%  Similarity=0.280  Sum_probs=76.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. . .++.++|+||+|+++++|++|..||...........+......                      
T Consensus       170 ~t~~y~aPE~~~-~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------------------  225 (277)
T 3f3z_A          170 GTPYYVSPQVLE-G-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFT----------------------  225 (277)
T ss_dssp             SCTTTCCHHHHT-T-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC----------------------
T ss_pred             CCCCccChHHhc-c-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC----------------------
Confidence            688999999953 3 4889999999999999999999999766443332222211110                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                        ........++.++.+|+.+||..||++||++.++++||||.+...
T Consensus       226 --~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~  270 (277)
T 3f3z_A          226 --FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS  270 (277)
T ss_dssp             --CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred             --CCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence              011122347889999999999999999999999999999987543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.84  E-value=8.5e-21  Score=134.90  Aligned_cols=100  Identities=25%  Similarity=0.233  Sum_probs=77.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. . .++.++||||+||++|+|++|..||.+.........+.....                       
T Consensus       210 gt~~y~aPE~~~-~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~-----------------------  264 (504)
T 3q5i_A          210 GTAYYIAPEVLK-K-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKY-----------------------  264 (504)
T ss_dssp             SCTTTCCHHHHT-T-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----------------------
T ss_pred             CCcCCCCHHHhc-c-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence            789999999953 3 689999999999999999999999987755443333222110                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                       ......+..++.++++||.+||..||.+|||++++++||||....
T Consensus       265 -~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          265 -YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             -CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             -CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence             001122355889999999999999999999999999999998654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.83  E-value=1.2e-20  Score=131.17  Aligned_cols=100  Identities=18%  Similarity=0.138  Sum_probs=75.6

Q ss_pred             ccCcccchhhhcCCCC---CChhhhHHHHHHHHHHHHhCCCCcCCCChhHHH-HHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSSV---YMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLS-LIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~---~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||+.|+|||++.+...   ++.++|+||+||++|+|++|..||.+.+..... .+.........                
T Consensus       231 gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~----------------  294 (410)
T 3v8s_A          231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTF----------------  294 (410)
T ss_dssp             SCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCC----------------
T ss_pred             CCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccC----------------
Confidence            7899999999765422   789999999999999999999999877544332 23221100000                


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCC--CCCHHHHhcCCCccch
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDH--RVTANDALCIGTSEKL  126 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~--R~t~~~~l~~~~~~~~  126 (142)
                      +         ....++.++++||.+||..+|.+  |++++++++||||+.+
T Consensus       295 p---------~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          295 P---------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             C---------TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             C---------CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence            0         01237889999999999999988  9999999999999865

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.83  E-value=1.2e-20  Score=124.94  Aligned_cols=96  Identities=19%  Similarity=0.113  Sum_probs=70.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++.+...++.++||||+|+++++|++|.+++...  .....+... ..  .                    
T Consensus       192 gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~-~~--~--------------------  246 (289)
T 1x8b_A          192 GDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG--DQWHEIRQG-RL--P--------------------  246 (289)
T ss_dssp             CCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS--HHHHHHHTT-CC--C--------------------
T ss_pred             CCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch--hHHHHHHcC-CC--C--------------------
Confidence            6889999999766557778999999999999999998766433  112222110 00  0                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                           .....++.++.+|+.+||..||++||++.++++||||.+..
T Consensus       247 -----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          247 -----RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS  287 (289)
T ss_dssp             -----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC----
T ss_pred             -----CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhhc
Confidence                 01124788999999999999999999999999999998754

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.83  E-value=1.3e-20  Score=126.66  Aligned_cols=93  Identities=28%  Similarity=0.292  Sum_probs=70.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. + .++.++||||+|+++++|++|..++...  .....+..  +.                       
T Consensus       218 gt~~y~aPE~~~-~-~~~~~~DiwslG~il~el~~g~~~~~~~--~~~~~~~~--~~-----------------------  268 (311)
T 3p1a_A          218 GDPRYMAPELLQ-G-SYGTAADVFSLGLTILEVACNMELPHGG--EGWQQLRQ--GY-----------------------  268 (311)
T ss_dssp             CCGGGCCGGGGG-T-CCSTHHHHHHHHHHHHHHHHTCCCCSSH--HHHHHHTT--TC-----------------------
T ss_pred             CCccccCHhHhc-C-CCCchhhHHHHHHHHHHHHhCCCCCCCc--cHHHHHhc--cC-----------------------
Confidence            788999999854 3 6899999999999999999997665422  11111110  00                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                        ........++.++.+|+.+||..||++|||++++++||||++
T Consensus       269 --~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          269 --LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             --CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             --CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence              001223457889999999999999999999999999999975

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.83  E-value=9.1e-21  Score=132.61  Aligned_cols=102  Identities=25%  Similarity=0.228  Sum_probs=71.9

Q ss_pred             ccCcccchhhhcC------CCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHh
Q 048170            2 VEFPYKAPESRIC------SSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELL   74 (142)
Q Consensus         2 ~t~~y~~PE~~~~------~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (142)
                      ||+.|+|||++.+      ...++.++||||+||++|+|++ |..||....... ..+.....  ........       
T Consensus       194 gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-~~i~~~~~--~~~~~~~~-------  263 (434)
T 2rio_A          194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-SNIIRGIF--SLDEMKCL-------  263 (434)
T ss_dssp             -CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-HHHHHTCC--CCCCCTTC-------
T ss_pred             CCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-HHHhcCCC--Cccccccc-------
Confidence            7889999999754      2468999999999999999998 899996553222 12222110  00000000       


Q ss_pred             hcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           75 HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                               .    ...++.++.+|+.+||..||++||++.++++||||+..
T Consensus       264 ---------~----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          264 ---------H----DRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             ---------C----CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSCH
T ss_pred             ---------c----cccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCCc
Confidence                     0    01135678999999999999999999999999999854

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.83  E-value=1.3e-20  Score=124.80  Aligned_cols=103  Identities=17%  Similarity=0.164  Sum_probs=78.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+|+++++|++|..||...........+.....                       
T Consensus       173 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----------------------  228 (283)
T 3bhy_A          173 GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY-----------------------  228 (283)
T ss_dssp             CCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC-----------------------
T ss_pred             CCcCccCcceec-CCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhccc-----------------------
Confidence            678899999954 44789999999999999999999999976644333222221110                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                       ..........+..+.+|+.+||..||++||++.++++||||..+...
T Consensus       229 -~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~  275 (283)
T 3bhy_A          229 -DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR  275 (283)
T ss_dssp             -CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred             -CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence             00112334578899999999999999999999999999999987544

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.83  E-value=2.1e-20  Score=124.90  Aligned_cols=100  Identities=16%  Similarity=0.106  Sum_probs=75.9

Q ss_pred             ccCcccchhhhcCCC-CCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSS-VYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~-~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++.+.. .++.++|+||+|+++|+|++|..||...........+......                     
T Consensus       173 ~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~---------------------  231 (305)
T 2wtk_C          173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYA---------------------  231 (305)
T ss_dssp             SCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC---------------------
T ss_pred             CCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCC---------------------
Confidence            688999999965432 3478999999999999999999999866544333222211100                     


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                             ....++.++.+|+.+||..||++||+++++++||||......
T Consensus       232 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~  273 (305)
T 2wtk_C          232 -------IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPP  273 (305)
T ss_dssp             -------CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCCC
T ss_pred             -------CCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCCC
Confidence                   012367889999999999999999999999999999865443

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.83  E-value=3.5e-20  Score=123.48  Aligned_cols=103  Identities=21%  Similarity=0.263  Sum_probs=76.6

Q ss_pred             ccCcccchhhhc-----CCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRI-----CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~-----~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      ||..|+|||++.     ....++.++|+||+|+++++|++|..||...........+.........              
T Consensus       185 ~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------  250 (298)
T 1phk_A          185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS--------------  250 (298)
T ss_dssp             SCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT--------------
T ss_pred             CCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCc--------------
Confidence            678899999864     2346889999999999999999999999766444333322211110000              


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                                ......+.++.+|+.+||..||++||+++++++||||.+...
T Consensus       251 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (298)
T 1phk_A          251 ----------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVV  292 (298)
T ss_dssp             ----------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC-
T ss_pred             ----------ccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhccc
Confidence                      011347888999999999999999999999999999997643

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.83  E-value=1.6e-20  Score=127.30  Aligned_cols=102  Identities=26%  Similarity=0.309  Sum_probs=77.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++.+ ..++.++|+||+|+++|+|++|..||...........+......                      
T Consensus       203 gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~----------------------  259 (335)
T 2owb_A          203 GTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS----------------------  259 (335)
T ss_dssp             SCCSSCCHHHHHT-SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC----------------------
T ss_pred             CCccccCHHHhcc-CCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCC----------------------
Confidence            6788999999654 47899999999999999999999999766443332222211110                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcccc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHL  132 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~~  132 (142)
                            ....++.++.+||.+||..||++||+++++++|+||.........
T Consensus       260 ------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~~~~~  304 (335)
T 2owb_A          260 ------IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARL  304 (335)
T ss_dssp             ------CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCSCC
T ss_pred             ------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCccccC
Confidence                  012367788999999999999999999999999999876544433

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.83  E-value=2e-20  Score=126.12  Aligned_cols=101  Identities=16%  Similarity=0.180  Sum_probs=73.8

Q ss_pred             ccCcccchhhhcC----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRIC----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||..|+|||++.+    ...++.++||||+|+++|+|++|..||...........+.....+  ..              
T Consensus       191 ~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~--------------  254 (326)
T 2x7f_A          191 GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAP--RL--------------  254 (326)
T ss_dssp             CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC--CC--------------
T ss_pred             CCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccc--cC--------------
Confidence            6788999999652    346889999999999999999999999765433222221111110  00              


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                                ....++.++.+||.+||..||.+||+++++++||||.+...
T Consensus       255 ----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  295 (326)
T 2x7f_A          255 ----------KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPN  295 (326)
T ss_dssp             ----------SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTT
T ss_pred             ----------CccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCcc
Confidence                      01236788999999999999999999999999999987543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.83  E-value=3.6e-20  Score=124.87  Aligned_cols=102  Identities=23%  Similarity=0.270  Sum_probs=75.9

Q ss_pred             ccCcccchhhhc--CCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRI--CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~--~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.  +...++.++|+||+|+++|+|++|..||.... ...+...+.....                    
T Consensus       178 gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--------------------  237 (322)
T 2ycf_A          178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY--------------------  237 (322)
T ss_dssp             SCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCC--------------------
T ss_pred             CCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcc--------------------
Confidence            688999999964  34578899999999999999999999996542 1112111111000                    


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                          .........++.++.+|+.+||..||++||+++++++||||.+..
T Consensus       238 ----~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~  282 (322)
T 2ycf_A          238 ----NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED  282 (322)
T ss_dssp             ----CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHH
T ss_pred             ----ccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHH
Confidence                011123345788999999999999999999999999999998643

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.83  E-value=1.9e-20  Score=127.28  Aligned_cols=117  Identities=18%  Similarity=0.136  Sum_probs=76.4

Q ss_pred             ccCcccchhhhcCCCCCCh-hhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMT-PHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~-~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||..|+|||++.+...++. ++|+||+|+++++|++|..||..... ......+.......+.....      +   ...
T Consensus       212 ~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~------~---~~~  282 (348)
T 2pml_X          212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNH------F---LYP  282 (348)
T ss_dssp             SCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSS------S---TTT
T ss_pred             CCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhh------h---hcc
Confidence            6888999999665546666 99999999999999999999986633 33222221111110100000      0   000


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ............++.++.+|+.+||..||.+||+++++++||||.+..
T Consensus       283 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          283 LTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             TCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             ccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence            001111222355888999999999999999999999999999999754

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.83  E-value=2.2e-20  Score=124.37  Aligned_cols=100  Identities=26%  Similarity=0.310  Sum_probs=76.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++. ...++.++|+||+|+++++|++|..||...........+......                      
T Consensus       177 ~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------------------  233 (294)
T 2rku_A          177 GTPNYIAPEVLS-KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS----------------------  233 (294)
T ss_dssp             SCCSSCCHHHHT-TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC----------------------
T ss_pred             CCCCcCCcchhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCC----------------------
Confidence            678899999954 447889999999999999999999999766443322222111000                      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                            .....+.++.+|+.+||..||++||+++++++|+||.+.....
T Consensus       234 ------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~~  276 (294)
T 2rku_A          234 ------IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA  276 (294)
T ss_dssp             ------CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred             ------CccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCcCC
Confidence                  0123677899999999999999999999999999998654443

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.82  E-value=8e-21  Score=132.96  Aligned_cols=101  Identities=16%  Similarity=0.201  Sum_probs=75.9

Q ss_pred             ccCcccchhhhc----CCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRI----CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~----~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      ||+.|+|||++.    +...++.++|+||+||++|||++|+.||.+.+.... ..+........                
T Consensus       238 GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~----------------  301 (437)
T 4aw2_A          238 GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ----------------  301 (437)
T ss_dssp             SCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC----------------
T ss_pred             CCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccccc----------------
Confidence            789999999975    244689999999999999999999999987754333 33322110000                


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCC--CCCHHHHhcCCCccch
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDH--RVTANDALCIGTSEKL  126 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~--R~t~~~~l~~~~~~~~  126 (142)
                      ++        .....++.++++||.+||+.+|++  |++++++++||||..+
T Consensus       302 ~p--------~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i  345 (437)
T 4aw2_A          302 FP--------TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI  345 (437)
T ss_dssp             CC--------SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred             CC--------cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence            00        001237889999999999988888  9999999999999864

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.82  E-value=1.8e-20  Score=127.16  Aligned_cols=91  Identities=15%  Similarity=0.138  Sum_probs=71.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+...++.++||||+|+++|+|++|..||......        .....                     
T Consensus       191 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~---------------------  241 (335)
T 3dls_A          191 GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------VEAAI---------------------  241 (335)
T ss_dssp             SCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------TTTCC---------------------
T ss_pred             CCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------Hhhcc---------------------
Confidence            6889999999766544589999999999999999999999632110        00000                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                           .....++.++.+||.+||..||++||+++++++||||.+.
T Consensus       242 -----~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          242 -----HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             -----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             -----CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence                 0012267889999999999999999999999999999863

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.82  E-value=6.5e-21  Score=125.97  Aligned_cols=97  Identities=23%  Similarity=0.292  Sum_probs=56.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+|+++++|++|..||...........+   ..   ..                . 
T Consensus       174 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~---~~----------------~-  229 (278)
T 3cok_A          174 GTPNYISPEIAT-RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV---VL---AD----------------Y-  229 (278)
T ss_dssp             -------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C---CS---SC----------------C-
T ss_pred             CCCCcCCcchhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH---hh---cc----------------c-
Confidence            678899999954 447889999999999999999999999755322111000   00   00                0 


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                           ......+.++.+|+.+||..||++||+++++++||||.+..
T Consensus       230 -----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          230 -----EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             -----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred             -----CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence                 01123678899999999999999999999999999998643

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.82  E-value=1.8e-20  Score=134.67  Aligned_cols=96  Identities=31%  Similarity=0.503  Sum_probs=74.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh----hHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK----DHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.....    ..+...+....   ..               
T Consensus       347 GT~~Y~APEvl~~-~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~---~~---------------  407 (576)
T 2acx_A          347 GTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP---EE---------------  407 (576)
T ss_dssp             SCGGGCCHHHHTT-CEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCC---CC---------------
T ss_pred             CCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccc---cc---------------
Confidence            7899999999654 4789999999999999999999999976521    22222222111   00               


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                                ....++.++++||.+||..||.+|+     +++++++||||..+
T Consensus       408 ----------~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          408 ----------YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             ----------CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred             ----------CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence                      0123788999999999999999999     79999999999964

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.82  E-value=4e-20  Score=123.00  Aligned_cols=101  Identities=25%  Similarity=0.337  Sum_probs=73.0

Q ss_pred             ccCcccchhhhcCC-CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICS-SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~-~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||..|+|||++.+. ..++.++|+||+|+++|+|++|..||........ ..........+.                  
T Consensus       185 ~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~------------------  246 (295)
T 2clq_A          185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE------------------  246 (295)
T ss_dssp             CCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCC------------------
T ss_pred             CCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccccc------------------
Confidence            67889999996543 3488999999999999999999999965422211 111111111000                  


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                              ....++.++.+|+.+||..||++||+++++++|+||.....
T Consensus       247 --------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  287 (295)
T 2clq_A          247 --------IPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSK  287 (295)
T ss_dssp             --------CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC---
T ss_pred             --------ccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhccc
Confidence                    11236888999999999999999999999999999986543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.82  E-value=2.9e-20  Score=124.79  Aligned_cols=101  Identities=19%  Similarity=0.224  Sum_probs=72.6

Q ss_pred             ccCcccchhhhc----CCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-Ch-hHHHHHHHHhCCCCCCCCCCccchHHHhh
Q 048170            2 VEFPYKAPESRI----CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KK-DHLSLIVRLFGNPTKETWPGANYISELLH   75 (142)
Q Consensus         2 ~t~~y~~PE~~~----~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (142)
                      ||+.|+|||++.    ....++.++||||+|+++|+|++|..||... .. .....+...  . .... +          
T Consensus       186 ~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~-~~~~-~----------  251 (318)
T 2dyl_A          186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE--E-PPLL-P----------  251 (318)
T ss_dssp             -CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHS--C-CCCC-C----------
T ss_pred             CCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhcc--C-CCCC-C----------
Confidence            678999999964    2446889999999999999999999999764 22 222222221  1 0000 0          


Q ss_pred             cCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           76 SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                                  ....++.++.+|+.+||..||.+||+++++++||||.+...
T Consensus       252 ------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (318)
T 2dyl_A          252 ------------GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYET  292 (318)
T ss_dssp             ------------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHHH
T ss_pred             ------------ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhccc
Confidence                        01236788999999999999999999999999999987543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=6.9e-20  Score=125.14  Aligned_cols=99  Identities=20%  Similarity=0.296  Sum_probs=71.5

Q ss_pred             ccCcccchhhhcCC-CCCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHH-hCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICS-SVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRL-FGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~-~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+. ..++.++||||+||++|+|++|..||.... ......+... ....+.                 
T Consensus       222 gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----------------  284 (355)
T 1vzo_A          222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP-----------------  284 (355)
T ss_dssp             SCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC-----------------
T ss_pred             cCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCC-----------------
Confidence            68899999997653 357899999999999999999999996541 1111111111 000000                 


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                               ....++..+.+||.+||..||++||     +++++++|+||..+
T Consensus       285 ---------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          285 ---------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             ---------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             ---------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence                     0123678899999999999999999     99999999999864

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.82  E-value=1.1e-21  Score=134.98  Aligned_cols=95  Identities=14%  Similarity=0.106  Sum_probs=71.6

Q ss_pred             CcccchhhhcCC----------CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHH
Q 048170            4 FPYKAPESRICS----------SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISEL   73 (142)
Q Consensus         4 ~~y~~PE~~~~~----------~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (142)
                      +.|+|||++.+.          ..++.++||||+||++|+|++|+.||........              .      .  
T Consensus       266 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~--------------~------~--  323 (377)
T 3byv_A          266 RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG--------------S------E--  323 (377)
T ss_dssp             TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CC--------------S------G--
T ss_pred             cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccc--------------h------h--
Confidence            789999996544          2789999999999999999999999953311000              0      0  


Q ss_pred             hhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           74 LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                                ........++.++.+||.+||..||++||++.++++||||.++....
T Consensus       324 ----------~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~  370 (377)
T 3byv_A          324 ----------WIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTEL  370 (377)
T ss_dssp             ----------GGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHHHH
T ss_pred             ----------hhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHHHH
Confidence                      00001134788999999999999999999999999999999876543

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.82  E-value=4e-20  Score=132.26  Aligned_cols=96  Identities=18%  Similarity=0.218  Sum_probs=73.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh----hHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK----DHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.+...    ..+...+....   ..               
T Consensus       351 GT~~Y~APE~l~~-~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~---~~---------------  411 (543)
T 3c4z_A          351 GTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA---VT---------------  411 (543)
T ss_dssp             SCTTTSCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC---CC---------------
T ss_pred             CCccccChhhhcC-CCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc---cC---------------
Confidence            7899999999654 5899999999999999999999999976521    12211111100   00               


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccch
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKL  126 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~  126 (142)
                                ....++.++.+||.+||..||.+||+     ++++++||||+.+
T Consensus       412 ----------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          412 ----------YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             ----------CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             ----------CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence                      01237889999999999999999995     5899999999964

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.82  E-value=5.8e-20  Score=123.30  Aligned_cols=100  Identities=20%  Similarity=0.185  Sum_probs=74.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++. ...++.++|+||+|+++++|++|..||...........+.....  ...                  
T Consensus       187 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~------------------  245 (314)
T 3com_A          187 GTPFWMAPEVIQ-EIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPP--PTF------------------  245 (314)
T ss_dssp             SCGGGCCHHHHS-SSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC--CCC------------------
T ss_pred             CCCCccChhhcC-CCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC--ccc------------------
Confidence            678899999954 44789999999999999999999999976543322222111110  000                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                           .....++.++.+|+.+||..||++||++.++++||||....
T Consensus       246 -----~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          246 -----RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             -----SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred             -----CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence                 00123678899999999999999999999999999998653

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.82  E-value=1.7e-19  Score=119.19  Aligned_cols=98  Identities=20%  Similarity=0.219  Sum_probs=75.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++.+ ..++.++|+||+|+++|+|++|..||...........+.......                     
T Consensus       178 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---------------------  235 (279)
T 2w5a_A          178 GTPYYMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---------------------  235 (279)
T ss_dssp             SCCTTCCHHHHHC-C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC---------------------
T ss_pred             CCccccChHHhcc-CCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccccc---------------------
Confidence            6788999999654 478999999999999999999999998765544333322211100                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                            .....+.++.+|+.+||..||++||+++++++|+|+..-.
T Consensus       236 ------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          236 ------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             ------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred             ------CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence                  0123678899999999999999999999999999998654

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.82  E-value=2.3e-20  Score=123.94  Aligned_cols=100  Identities=24%  Similarity=0.275  Sum_probs=75.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++. + .++.++|+||+|+++++|++|..||.+.........+........                    
T Consensus       185 ~~~~y~aPE~~~-~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  242 (287)
T 2wei_A          185 GTAYYIAPEVLR-G-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD--------------------  242 (287)
T ss_dssp             HHHTTCCHHHHT-T-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--------------------
T ss_pred             CcccccChHHhc-C-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC--------------------
Confidence            467899999854 3 588999999999999999999999987654443332221111000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                          ......++.++.+||.+||..||++||++.++++||||.+..
T Consensus       243 ----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  284 (287)
T 2wei_A          243 ----LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (287)
T ss_dssp             ----SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred             ----chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhccc
Confidence                011234788999999999999999999999999999998764

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.81  E-value=8e-20  Score=122.68  Aligned_cols=103  Identities=21%  Similarity=0.212  Sum_probs=72.5

Q ss_pred             ccCcccchhhhcC----------CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchH
Q 048170            2 VEFPYKAPESRIC----------SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYIS   71 (142)
Q Consensus         2 ~t~~y~~PE~~~~----------~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (142)
                      ||..|+|||++.+          ...++.++||||+|+++++|++|..||....... ..+...........        
T Consensus       190 gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~--------  260 (313)
T 3cek_A          190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-SKLHAIIDPNHEIE--------  260 (313)
T ss_dssp             CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-HHHHHHHCTTSCCC--------
T ss_pred             CCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH-HHHHHHHhcccccC--------
Confidence            6889999999654          1468899999999999999999999997552211 11111111111000        


Q ss_pred             HHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           72 ELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                                      .....+.++.+|+.+||..||++||+++++++||||......
T Consensus       261 ----------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~  302 (313)
T 3cek_A          261 ----------------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP  302 (313)
T ss_dssp             ----------------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC---
T ss_pred             ----------------CcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCCc
Confidence                            012246788999999999999999999999999999865443

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.81  E-value=1.6e-20  Score=130.63  Aligned_cols=100  Identities=24%  Similarity=0.312  Sum_probs=73.9

Q ss_pred             ccCcccchhhhcC------CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHh
Q 048170            2 VEFPYKAPESRIC------SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELL   74 (142)
Q Consensus         2 ~t~~y~~PE~~~~------~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   74 (142)
                      ||+.|+|||++..      ...++.++|+||+||++|||++|+.||.+...... ..+........              
T Consensus       225 Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~--------------  290 (412)
T 2vd5_A          225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS--------------  290 (412)
T ss_dssp             SCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC--------------
T ss_pred             cccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcC--------------
Confidence            7899999999753      34689999999999999999999999987654433 22322100000              


Q ss_pred             hcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCC---CCHHHHhcCCCccch
Q 048170           75 HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHR---VTANDALCIGTSEKL  126 (142)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R---~t~~~~l~~~~~~~~  126 (142)
                        ++        .....++.++++||.+||. +|.+|   ++++++++||||..+
T Consensus       291 --~p--------~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          291 --LP--------LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             --CC------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred             --CC--------ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence              00        0013478899999999999 99998   489999999999865

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.81  E-value=7.4e-20  Score=122.29  Aligned_cols=99  Identities=19%  Similarity=0.202  Sum_probs=75.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++. ...++.++|+||+|+++++|++|..||...........+.....+  .                   
T Consensus       181 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~-------------------  238 (303)
T 3a7i_A          181 GTPFWMAPEVIK-QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP--T-------------------  238 (303)
T ss_dssp             SCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC--C-------------------
T ss_pred             CCcCccCHHHHh-cCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCC--C-------------------
Confidence            678899999954 447889999999999999999999999765443332222211100  0                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                            ....++.++.+|+.+||..||++||++.++++|+||.....
T Consensus       239 ------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  279 (303)
T 3a7i_A          239 ------LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK  279 (303)
T ss_dssp             ------CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred             ------CccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence                  01236788999999999999999999999999999976543

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.81  E-value=1.3e-20  Score=127.85  Aligned_cols=104  Identities=19%  Similarity=0.230  Sum_probs=60.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHH-HHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL-IVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++ ....++.++||||+|+++|+|++|..||.......... .......                     .
T Consensus       191 ~t~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---------------------~  248 (336)
T 3fhr_A          191 YTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL---------------------G  248 (336)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------------------
T ss_pred             CCcCccChhhh-CCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhc---------------------c
Confidence            57889999995 44478899999999999999999999996553222110 0000000                     0


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ........+..++.++.+||.+||..||++|||++++++||||.+..
T Consensus       249 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             --CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence            00000011234788999999999999999999999999999998654

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.80  E-value=5.1e-20  Score=124.15  Aligned_cols=93  Identities=22%  Similarity=0.256  Sum_probs=72.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+...++.++|+||+|+++|+|++|..||....     .+..  +..   .                  
T Consensus       210 gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~~--~~~---~------------------  261 (320)
T 3a99_A          210 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIR--GQV---F------------------  261 (320)
T ss_dssp             SCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HHHH--CCC---C------------------
T ss_pred             CCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-----hhhc--ccc---c------------------
Confidence            68899999997666456789999999999999999999995321     1111  000   0                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                            ....++.++.+||.+||..||++||+++++++||||.+...
T Consensus       262 ------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  302 (320)
T 3a99_A          262 ------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL  302 (320)
T ss_dssp             ------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             ------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccC
Confidence                  01237788999999999999999999999999999997643

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.80  E-value=1.2e-19  Score=120.81  Aligned_cols=99  Identities=19%  Similarity=0.182  Sum_probs=68.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++.+...++.++|+||+|+++|+|++   ||... ........+.......+.                  
T Consensus       192 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~------------------  250 (303)
T 1zy4_A          192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPP------------------  250 (303)
T ss_dssp             --CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCT------------------
T ss_pred             CcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCc------------------
Confidence            67889999997665579999999999999999997   44322 111111111111100000                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                            ......+..+.+|+.+||..||.+|||+.++++||||....
T Consensus       251 ------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (303)
T 1zy4_A          251 ------DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKH  291 (303)
T ss_dssp             ------TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCC
T ss_pred             ------cccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCC
Confidence                  01123567789999999999999999999999999998653

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.80  E-value=3.9e-20  Score=124.72  Aligned_cols=95  Identities=19%  Similarity=0.188  Sum_probs=68.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+ ..++.++|+||+|+++|+|++|..++.    ..............                     
T Consensus       238 gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~~~~~~----~~~~~~~~~~~~~~---------------------  291 (332)
T 3qd2_B          238 GTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELLYSFSTQM----ERVRIITDVRNLKF---------------------  291 (332)
T ss_dssp             -CGGGSCHHHHHC-CCCCTHHHHHHHHHHHHHHHSCCCCHH----HHHHHHHHHHTTCC---------------------
T ss_pred             CCcCccChHHhcC-CCCcchhhHHHHHHHHHHHHHcCCChh----HHHHHHHHhhccCC---------------------
Confidence            7889999999654 488999999999999999999866552    11111111101000                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                          .......+.++.+|+.+||..||++||+++++++||||+++
T Consensus       292 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~~  332 (332)
T 3qd2_B          292 ----PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFENL  332 (332)
T ss_dssp             ----CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCCC
T ss_pred             ----CcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhcC
Confidence                01112245677999999999999999999999999999864

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.78  E-value=9e-20  Score=123.09  Aligned_cols=106  Identities=18%  Similarity=0.206  Sum_probs=61.5

Q ss_pred             ccCcccchhhhc---CCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRI---CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~---~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||..|+|||++.   ....++.++|+||+|+++++|++|..||....... ..+...... ....               
T Consensus       187 gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~-~~~~---------------  249 (327)
T 3aln_A          187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-DQLTQVVKG-DPPQ---------------  249 (327)
T ss_dssp             -------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------CCCCCS-CCCC---------------
T ss_pred             CCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-HHHHHHhcC-CCCC---------------
Confidence            678899999963   34468899999999999999999999996542110 000000000 0000               


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                           ........++.++.+|+.+||..||++||++.++++||||......
T Consensus       250 -----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~~  295 (327)
T 3aln_A          250 -----LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEER  295 (327)
T ss_dssp             -----CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHHS
T ss_pred             -----CCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhHhh
Confidence                 0001113478899999999999999999999999999999866443

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.78  E-value=4.3e-19  Score=119.01  Aligned_cols=93  Identities=19%  Similarity=0.238  Sum_probs=70.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++.+....+.++|+||+|+++|+|++|+.||....     .+... ..                       
T Consensus       200 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~-~~-----------------------  250 (312)
T 2iwi_A          200 GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-----EILEA-EL-----------------------  250 (312)
T ss_dssp             SCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HHHHT-CC-----------------------
T ss_pred             CcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-----HHhhh-cc-----------------------
Confidence            68889999996655445668999999999999999999996321     11110 00                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                           .....++.++.+||.+||..||++||+++++++|+||.....
T Consensus       251 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~  292 (312)
T 2iwi_A          251 -----HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE  292 (312)
T ss_dssp             -----CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred             -----CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence                 001236788999999999999999999999999999997643

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.78  E-value=2.9e-20  Score=129.32  Aligned_cols=94  Identities=14%  Similarity=0.094  Sum_probs=72.3

Q ss_pred             Ccccchhhhc---------CCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHh
Q 048170            4 FPYKAPESRI---------CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELL   74 (142)
Q Consensus         4 ~~y~~PE~~~---------~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (142)
                      +.|+|||++.         ....++.++||||+||++|+|++|+.||..........                       
T Consensus       271 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~-----------------------  327 (413)
T 3dzo_A          271 RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSE-----------------------  327 (413)
T ss_dssp             TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSG-----------------------
T ss_pred             CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHH-----------------------
Confidence            7899999963         44468889999999999999999999996442111000                       


Q ss_pred             hcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           75 HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                               ........++.++.+||.+||..||++||++.++++||||.++...
T Consensus       328 ---------~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~~~  373 (413)
T 3dzo_A          328 ---------WIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTE  373 (413)
T ss_dssp             ---------GGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHHH
T ss_pred             ---------HHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHHHHH
Confidence                     0000112467899999999999999999999999999999977544

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.78  E-value=9.5e-20  Score=122.15  Aligned_cols=109  Identities=17%  Similarity=0.115  Sum_probs=62.3

Q ss_pred             ccCcccchhhhcCCC-----CCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRICSS-----VYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~-----~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      ||+.|||||++.+..     .++.++|||||||++|||++|..|+........         +-....+...........
T Consensus       174 GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~---------p~~~~~~~~~~~~~~~~~  244 (303)
T 3hmm_A          174 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL---------PYYDLVPSDPSVEEMRKV  244 (303)
T ss_dssp             CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCC---------TTTTTSCSSCCHHHHHHH
T ss_pred             ccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccc---------cchhcccccchHHHHHHH
Confidence            799999999965432     367789999999999999999877643211000         000000000001111100


Q ss_pred             CC-CCCCchhHhhh--cCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           77 LP-QCEPADLAEKT--HGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        77 ~~-~~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                      +. ...........  ......+.+|+.+||..||++|||+.++++
T Consensus       245 ~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          245 VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             HTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             HhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            00 00000000000  112346789999999999999999999875

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.77  E-value=1.9e-19  Score=120.87  Aligned_cols=100  Identities=17%  Similarity=0.271  Sum_probs=75.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+. .++.++||||+|+++|+|++|+.||.+..............                        
T Consensus       181 gt~~y~aPE~~~~~-~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~------------------------  235 (311)
T 3ork_A          181 GTAQYLSPEQARGD-SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED------------------------  235 (311)
T ss_dssp             -CCTTCCHHHHHTC-CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC------------------------
T ss_pred             cCcccCCHHHhcCC-CCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC------------------------
Confidence            68899999996544 89999999999999999999999997664433322111100                        


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                      ..........++.++.+|+.+||..||++||++.+++.|+|++..
T Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence            011122234578899999999999999999999999999998754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.77  E-value=4.7e-20  Score=124.14  Aligned_cols=116  Identities=14%  Similarity=0.206  Sum_probs=72.3

Q ss_pred             ccCcccchhhhcC-------CCCCChhhhHHHHHHHHHHHHhCCCCcCCC-C-hhHHHHHHHHhCCCCCCCCCCccchHH
Q 048170            2 VEFPYKAPESRIC-------SSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-K-KDHLSLIVRLFGNPTKETWPGANYISE   72 (142)
Q Consensus         2 ~t~~y~~PE~~~~-------~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (142)
                      ||..|+|||++..       ...++.++||||+||++|+|++|..||... . ......+.......+...+........
T Consensus       177 gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  256 (319)
T 4euu_A          177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAEN  256 (319)
T ss_dssp             SCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTT
T ss_pred             cCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccC
Confidence            6889999998652       357889999999999999999999999644 1 111222222222222222111111000


Q ss_pred             ----HhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCC
Q 048170           73 ----LLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGT  122 (142)
Q Consensus        73 ----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~  122 (142)
                          +...++..     .......+..+.+||.+||..||++|||++|+++||-
T Consensus       257 ~~~~~~~~~~~~-----~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          257 GPIDWSGDMPVS-----CSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             CCEEEESSCCTT-----CSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             CccccCccCCcc-----cccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence                00011100     0111224567789999999999999999999998874

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.77  E-value=2.7e-18  Score=115.28  Aligned_cols=91  Identities=14%  Similarity=0.116  Sum_probs=68.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++||||+|+++|+|++|..||...........+........                    
T Consensus       201 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~--------------------  259 (309)
T 3p86_A          201 GTPEWMAPEVLR-DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE--------------------  259 (309)
T ss_dssp             -CCTTSCHHHHT-TCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCC--------------------
T ss_pred             CCccccChhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC--------------------
Confidence            688999999955 44789999999999999999999999976654443332221111100                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            ....++.++.+||.+||..||.+||+++++++
T Consensus       260 ------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          260 ------IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             ------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------CCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                  11347788999999999999999999999884

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.76  E-value=2.1e-18  Score=116.19  Aligned_cols=98  Identities=17%  Similarity=0.170  Sum_probs=68.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|+.|+|||.+.+ ..++.++||||+||++|+|++ |..||.+.........+......  ..                 
T Consensus       201 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~--~~-----------------  260 (323)
T 3qup_A          201 LPVKWLALESLAD-NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRL--KQ-----------------  260 (323)
T ss_dssp             CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC--CC-----------------
T ss_pred             CcccccCchhhcC-CCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCC--CC-----------------
Confidence            4567999999554 479999999999999999999 89999876443332222211110  00                 


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCC-------HHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-------ANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-------~~~~l~~~~~~~~~  127 (142)
                              ....+.++.+|+.+||..||++||+       ++++++|+|+....
T Consensus       261 --------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~  306 (323)
T 3qup_A          261 --------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS  306 (323)
T ss_dssp             --------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-------
T ss_pred             --------CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCC
Confidence                    1236788999999999999999999       66788999988653

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.76  E-value=2.5e-18  Score=113.08  Aligned_cols=92  Identities=18%  Similarity=0.222  Sum_probs=69.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||.+. ...++.++|+||+|+++++|++|..||....................                    
T Consensus       176 ~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  234 (271)
T 3dtc_A          176 GAYAWMAPEVIR-ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP--------------------  234 (271)
T ss_dssp             CCGGGSCHHHHH-HCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCC--------------------
T ss_pred             CccceeCHHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCC--------------------
Confidence            688999999965 44789999999999999999999999976644333222221111000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                            ....++.++.+++.+||..||.+||++.+++++
T Consensus       235 ------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          235 ------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             ------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence                  012367889999999999999999999998853

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.76  E-value=2.4e-18  Score=118.01  Aligned_cols=95  Identities=16%  Similarity=0.224  Sum_probs=73.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+. .++.++||||+||++|+|++ |..||...........+........                   
T Consensus       248 ~t~~y~aPE~~~~~-~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~-------------------  307 (367)
T 3l9p_A          248 LPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-------------------  307 (367)
T ss_dssp             SCGGGCCHHHHHHC-CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             CcccEECHHHhcCC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            57789999996544 89999999999999999998 9999987755544443332221111                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                              ...++.++.+|+.+||..||.+||++++++++.++.
T Consensus       308 --------~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          308 --------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --------CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                    123678899999999999999999999999876543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.75  E-value=4.7e-18  Score=111.59  Aligned_cols=92  Identities=18%  Similarity=0.235  Sum_probs=66.9

Q ss_pred             ccCcccchhhhcCC--CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICS--SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~--~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|+|||++.+.  ..++.++||||+|+++|+|++|..||...............+..+.                  
T Consensus       170 ~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------  231 (271)
T 3kmu_A          170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT------------------  231 (271)
T ss_dssp             SCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCC------------------
T ss_pred             CCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCC------------------
Confidence            68899999996653  2234489999999999999999999976644333222211111110                  


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                              ....++.++.+++.+||..||++|||++++++
T Consensus       232 --------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          232 --------IPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                    01237888999999999999999999999873

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.75  E-value=1.8e-19  Score=131.16  Aligned_cols=122  Identities=19%  Similarity=0.121  Sum_probs=72.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh-HHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD-HLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++. ...++.++||||+|+++|+|++|..||...... .+...+...................+....   
T Consensus       185 gt~~Y~APE~l~-~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~l---  260 (676)
T 3qa8_A          185 GTLQYLAPELLE-QKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVL---  260 (676)
T ss_dssp             SCCTTCSSCSSC-CSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSS---
T ss_pred             CCcccCChHHhc-cCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhcccccccccc---
Confidence            688999999954 458999999999999999999999999654221 110000000000000000000000000000   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                        .........++.++.+||.+||..||++|||++++++||||..+.+-
T Consensus       261 --p~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~i  307 (676)
T 3qa8_A          261 --PTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSI  307 (676)
T ss_dssp             --CCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHH
T ss_pred             --CCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHH
Confidence              01111223356788999999999999999999999999999976544

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.74  E-value=6e-18  Score=112.19  Aligned_cols=92  Identities=16%  Similarity=0.197  Sum_probs=67.7

Q ss_pred             ccCcccchhhhcC-CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHH--HHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRIC-SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLS--LIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~-~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||..|+|||++.+ ...++.++|+||+|+++|+|++|..||.........  ......+..+.                 
T Consensus       188 g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----------------  250 (287)
T 4f0f_A          188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT-----------------  250 (287)
T ss_dssp             CCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC-----------------
T ss_pred             CCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC-----------------
Confidence            6889999999533 345789999999999999999999999766333322  12211111110                 


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                               ....++.++.+|+.+||..||++||+++++++
T Consensus       251 ---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          251 ---------IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             ---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------CCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                     01236788999999999999999999999874

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.74  E-value=4.7e-18  Score=114.82  Aligned_cols=91  Identities=18%  Similarity=0.217  Sum_probs=70.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||.+.+ ..++.++||||+|+++|+|++ |..||.+.........+......+.                   
T Consensus       181 ~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------  240 (327)
T 3poz_A          181 VPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ-------------------  240 (327)
T ss_dssp             CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC-------------------
T ss_pred             ccccccChHHhcc-CCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCC-------------------
Confidence            4678999999654 489999999999999999999 9999987655444444332221111                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                              ....+.++.+++.+||..||++||++.+++++
T Consensus       241 --------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          241 --------PPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             --------CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             --------CccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                    12367789999999999999999999998854

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.74  E-value=1.2e-17  Score=111.93  Aligned_cols=92  Identities=17%  Similarity=0.209  Sum_probs=67.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++. ...++.++||||+|+++++|++|+.||.....................                   
T Consensus       165 gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------  224 (307)
T 2eva_A          165 GSAAWMAPEVFE-GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP-------------------  224 (307)
T ss_dssp             CCTTSSCHHHHT-CCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCC-------------------
T ss_pred             CCCceEChhhhC-CCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCC-------------------
Confidence            688999999955 448899999999999999999999999754222211111111110000                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            ....++.++.+|+.+||..||++||+++++++
T Consensus       225 ------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          225 ------LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             ------CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------cccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                  11347788999999999999999999999875

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.74  E-value=6.1e-18  Score=116.15  Aligned_cols=90  Identities=19%  Similarity=0.267  Sum_probs=68.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|+.|+|||++.+ ..++.++||||+||++|+|++ |..||.+.........+.......                    
T Consensus       267 ~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~--------------------  325 (370)
T 2psq_A          267 LPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD--------------------  325 (370)
T ss_dssp             SCGGGCCHHHHHT-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC--------------------
T ss_pred             cccceECHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCC--------------------
Confidence            4678999999654 489999999999999999998 999997664443333222111100                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....++.++.+|+.+||..||.+||++.++++
T Consensus       326 -------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~  357 (370)
T 2psq_A          326 -------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVE  357 (370)
T ss_dssp             -------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                   01236788999999999999999999999874

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.74  E-value=4e-18  Score=116.24  Aligned_cols=91  Identities=20%  Similarity=0.297  Sum_probs=68.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||..|+|||++.+ ..++.++||||+|+++|+|++ |..||.+.. .......+........                  
T Consensus       257 ~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------  317 (359)
T 3vhe_A          257 LPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA------------------  317 (359)
T ss_dssp             ECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCC------------------
T ss_pred             CCceeEChhhhcC-CCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCC------------------
Confidence            5678999999654 489999999999999999998 999997663 2333333322111111                  


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                               ....+.++.+++.+||..||.+||+++++++|
T Consensus       318 ---------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          318 ---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             ---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence                     12267889999999999999999999999854

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.74  E-value=2e-17  Score=111.11  Aligned_cols=92  Identities=16%  Similarity=0.119  Sum_probs=68.7

Q ss_pred             ccCcccchhhhcC--------CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHH
Q 048170            2 VEFPYKAPESRIC--------SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISEL   73 (142)
Q Consensus         2 ~t~~y~~PE~~~~--------~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (142)
                      ||..|+|||++.+        ...++.++||||+|+++|+|++|..||...........+.....+...           
T Consensus       196 g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------  264 (319)
T 2y4i_B          196 GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLS-----------  264 (319)
T ss_dssp             GGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCC-----------
T ss_pred             CcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCC-----------
Confidence            6788999999654        235789999999999999999999999866544433222211111100           


Q ss_pred             hhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           74 LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                                     ...++.++.+|+.+||..||++||++.++++
T Consensus       265 ---------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          265 ---------------QIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             ---------------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             ---------------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                           0136788999999999999999999999883

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.74  E-value=2.2e-18  Score=114.72  Aligned_cols=92  Identities=14%  Similarity=0.056  Sum_probs=67.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh---h-HHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK---D-HLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||+.|+|||++. ...++.++||||+|+++|+|++|..||.....   . ....+.....                    
T Consensus       180 gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------------  238 (298)
T 1csn_A          180 GTARYMSINTHL-GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ--------------------  238 (298)
T ss_dssp             SCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH--------------------
T ss_pred             CCcccCCchhhc-CCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc--------------------
Confidence            788999999954 44789999999999999999999999976421   1 1111111000                    


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                          ..........++.++.+|+.+||..||++||++++++
T Consensus       239 ----~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~  275 (298)
T 1csn_A          239 ----STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  275 (298)
T ss_dssp             ----HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             ----CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHH
Confidence                0111223345788999999999999999999999887

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.74  E-value=4.5e-18  Score=114.83  Aligned_cols=95  Identities=16%  Similarity=0.224  Sum_probs=72.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+ ..++.++||||+|+++|+|++ |..||...........+........                   
T Consensus       207 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------  266 (327)
T 2yfx_A          207 LPVKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-------------------  266 (327)
T ss_dssp             SCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             CCcceeCHhHhcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCC-------------------
Confidence            4678999999654 478999999999999999998 8899976654443333322111100                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                              ...++.++.+|+.+||..||.+||++.+++++.++.
T Consensus       267 --------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          267 --------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence                    123678899999999999999999999999887744

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.74  E-value=1.4e-17  Score=110.71  Aligned_cols=95  Identities=19%  Similarity=0.192  Sum_probs=69.7

Q ss_pred             ccCcccchhhhc--CCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRI--CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~--~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||..|+|||++.  ....++.++||||+|+++++|++|..||... ........+......+..                
T Consensus       184 gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------------  247 (289)
T 3og7_A          184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL----------------  247 (289)
T ss_dssp             CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCT----------------
T ss_pred             CCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcch----------------
Confidence            688999999964  2446889999999999999999999999765 444444433322211110                


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ......++.++.+|+.+||..||.+||+++++++
T Consensus       248 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          248 -------SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             -------TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------hhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                   1112347788999999999999999999999873

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.74  E-value=4.7e-18  Score=111.81  Aligned_cols=91  Identities=18%  Similarity=0.184  Sum_probs=68.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++. ...++.++|+||+|+++++|++ |..||...........+........                   
T Consensus       169 ~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------  228 (269)
T 4hcu_A          169 FPVKWASPEVFS-FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK-------------------  228 (269)
T ss_dssp             CCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             cccccCCHHHhc-CCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCC-------------------
Confidence            456799999954 4479999999999999999999 8999987655443333221111000                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                              ....+.++.+++.+||..||++||++++++++
T Consensus       229 --------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          229 --------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             --------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------CCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence                    02257789999999999999999999999854

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.74  E-value=6.2e-18  Score=112.17  Aligned_cols=89  Identities=16%  Similarity=0.188  Sum_probs=65.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCC-CCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK-PLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++.+...++.++||||+|+++|+|++|. +++..................                     
T Consensus       179 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~---------------------  237 (289)
T 4fvq_A          179 ERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQL---------------------  237 (289)
T ss_dssp             HTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC---------------------
T ss_pred             CcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCC---------------------
Confidence            5788999999776568999999999999999999964 555443443333322211110                     


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                              ....+.++.+|+.+||..||++||++.++++
T Consensus       238 --------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  268 (289)
T 4fvq_A          238 --------PAPKAAELANLINNCMDYEPDHRPSFRAIIR  268 (289)
T ss_dssp             --------CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             --------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                    0124678899999999999999999999884

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.73  E-value=7.9e-18  Score=113.61  Aligned_cols=91  Identities=14%  Similarity=0.135  Sum_probs=68.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++.+. .++.++|+||+|+++|+|++ |..||.+.........+.........                  
T Consensus       179 ~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------  239 (325)
T 3kex_A          179 TPIKWMALESIHFG-KYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP------------------  239 (325)
T ss_dssp             CCTTTSCHHHHHHC-CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCC------------------
T ss_pred             CcccccChHHhccC-CCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCC------------------
Confidence            56789999996544 79999999999999999999 99999876544443333321111110                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                               ...+.++.+|+.+||..||++||++.+++++
T Consensus       240 ---------~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          240 ---------QICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             ---------TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             ---------CcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                     1256678899999999999999999998764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.73  E-value=1e-17  Score=113.30  Aligned_cols=90  Identities=18%  Similarity=0.232  Sum_probs=69.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++.+ ..++.++||||+|+++|+|++ |..||.+.........+......+.                   
T Consensus       181 ~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------  240 (327)
T 3lzb_A          181 VPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ-------------------  240 (327)
T ss_dssp             CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC-------------------
T ss_pred             ccccccCHHHHcC-CCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            4668999999654 489999999999999999999 9999987755444444332221111                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                              ....+.++.+|+.+||..||.+||++.++++
T Consensus       241 --------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          241 --------PPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             --------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                    1226778999999999999999999999884

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.73  E-value=1.5e-17  Score=114.58  Aligned_cols=91  Identities=18%  Similarity=0.257  Sum_probs=69.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++.+ ..++.++||||+|+++++|++ |..||.......+...+........                   
T Consensus       255 ~t~~y~aPE~~~~-~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------  314 (382)
T 3tt0_A          255 LPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK-------------------  314 (382)
T ss_dssp             CGGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             CCcceeCHHHhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            4678999999654 489999999999999999999 9999987655544443332111100                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                              ...++.++.+|+.+||..||++||++++++++
T Consensus       315 --------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          315 --------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             --------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                    12377889999999999999999999998853

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.73  E-value=1.1e-17  Score=110.62  Aligned_cols=91  Identities=21%  Similarity=0.277  Sum_probs=67.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++. ...++.++|+||+|+++|+|++ |..||...........+......+.                   
T Consensus       176 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------  235 (281)
T 3cc6_A          176 LPIKWMSPESIN-FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPK-------------------  235 (281)
T ss_dssp             CCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCC-------------------
T ss_pred             CCcceeCchhhc-cCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCC-------------------
Confidence            466799999954 4478999999999999999998 9999976543333222222111110                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                              ...++..+.+++.+||..||++||++.+++++
T Consensus       236 --------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          236 --------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------CCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence                    12367889999999999999999999998853

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.73  E-value=8.6e-18  Score=111.22  Aligned_cols=91  Identities=18%  Similarity=0.172  Sum_probs=68.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++.+. .++.++|+||+|+++|+|++ |..||...........+........                   
T Consensus       183 ~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------  242 (283)
T 3gen_A          183 FPVRWSPPEVLMYS-KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-------------------  242 (283)
T ss_dssp             SCGGGCCHHHHHHC-CCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC-------------------
T ss_pred             cCcccCCHHHhccC-CCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCC-------------------
Confidence            46679999996544 78999999999999999998 9999986655443333221111000                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                              ....+.++.+|+.+||..||.+||++++++++
T Consensus       243 --------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          243 --------PHLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             --------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             --------CCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence                    02257789999999999999999999999854

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.72  E-value=1.4e-17  Score=111.72  Aligned_cols=91  Identities=20%  Similarity=0.288  Sum_probs=67.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|+|||++.+ ..++.++|+||+|+++|+|++ |..||.+... ......+........                  
T Consensus       212 ~t~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------  272 (316)
T 2xir_A          212 LPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA------------------  272 (316)
T ss_dssp             ECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCC------------------
T ss_pred             cceeecCchhhcc-ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCC------------------
Confidence            4678999999654 478999999999999999998 9999976632 222222221111000                  


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                               ....+.++.+++.+||..||.+||++.++++|
T Consensus       273 ---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          273 ---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             ---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                     12267789999999999999999999999854

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.72  E-value=7.3e-18  Score=112.09  Aligned_cols=93  Identities=11%  Similarity=-0.004  Sum_probs=67.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh----hHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK----DHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||..|+|||++.+ ..++.++||||+|+++|+|++|+.||.....    .....+......                   
T Consensus       177 gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------  236 (296)
T 3uzp_A          177 GTARYASINTHLG-IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-------------------  236 (296)
T ss_dssp             SCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-------------------
T ss_pred             cccccCChhhhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC-------------------
Confidence            6888999999554 4799999999999999999999999975311    122211110000                   


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           .+.......++.++.+|+.+||..||++||+++++++
T Consensus       237 -----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          237 -----TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             -----SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             -----CchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence                 0111223457889999999999999999999998873

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.72  E-value=1.1e-17  Score=113.83  Aligned_cols=96  Identities=9%  Similarity=-0.002  Sum_probs=67.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC--ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||..|+|||++.+ ..++.++||||+|+++|+|++|..||...  ..............                 .   
T Consensus       222 gt~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-----------------~---  280 (345)
T 2v62_A          222 GTIEFTSLDAHKG-VALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLD-----------------E---  280 (345)
T ss_dssp             SCTTTCCHHHHHT-CCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHH-----------------T---
T ss_pred             CCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcc-----------------c---
Confidence            6889999999654 48999999999999999999999999643  22222111111000                 0   


Q ss_pred             CCCchhHhhhc--CCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           80 CEPADLAEKTH--GLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        80 ~~~~~~~~~~~--~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                       ..........  .++.++.+|+.+||..||++||+++++++
T Consensus       281 -~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          281 -LPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             -TTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             -ccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence             0001111111  57889999999999999999999998773

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.72  E-value=1.2e-17  Score=110.54  Aligned_cols=90  Identities=19%  Similarity=0.248  Sum_probs=66.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|+.|+|||++. ...++.++|+||+|+++|+|++ |..||.+.........+......+                    
T Consensus       179 ~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~--------------------  237 (281)
T 1mp8_A          179 LPIKWMAPESIN-FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP--------------------  237 (281)
T ss_dssp             CCGGGCCHHHHH-HCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC--------------------
T ss_pred             CcccccChhhcc-cCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCC--------------------
Confidence            456799999955 4488999999999999999996 899997664333222222111000                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....++.++.+++.+||..||++||++.++++
T Consensus       238 -------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  269 (281)
T 1mp8_A          238 -------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  269 (281)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                   01247888999999999999999999999874

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.72  E-value=5.7e-18  Score=112.55  Aligned_cols=93  Identities=11%  Similarity=0.003  Sum_probs=67.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh----hHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK----DHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||..|+|||++. ...++.++||||+|+++|+|++|..||.+...    .....+.....                    
T Consensus       177 gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------------  235 (296)
T 4hgt_A          177 GTARYASINTHL-GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM--------------------  235 (296)
T ss_dssp             SCGGGCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH--------------------
T ss_pred             CCccccchHHhc-CCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc--------------------
Confidence            688999999955 44799999999999999999999999975411    11111111000                    


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                          ..+.......++.++.+|+.+||..||++||+++++++
T Consensus       236 ----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          236 ----STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             ----HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             ----cchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence                00112223457889999999999999999999999873

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.72  E-value=1.7e-17  Score=111.14  Aligned_cols=90  Identities=20%  Similarity=0.255  Sum_probs=67.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      +|..|+|||++.+ ..++.++||||+|+++++|++ |..||..... ...............                  
T Consensus       209 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------  269 (313)
T 1t46_A          209 LPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS------------------  269 (313)
T ss_dssp             ECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCC------------------
T ss_pred             CcceeeChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCC------------------
Confidence            4567999999654 489999999999999999998 9999976632 233332222111000                  


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                               ....+.++.+|+.+||..||.+||++.++++
T Consensus       270 ---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  300 (313)
T 1t46_A          270 ---------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (313)
T ss_dssp             ---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------cccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                     1236788999999999999999999999884

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.72  E-value=1.2e-17  Score=113.36  Aligned_cols=91  Identities=16%  Similarity=0.224  Sum_probs=67.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|+|||++.+ ..++.++||||+|+++|+|++ |..||.+... ......+.......                   
T Consensus       236 ~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------  295 (344)
T 1rjb_A          236 LPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMD-------------------  295 (344)
T ss_dssp             ECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCC-------------------
T ss_pred             CccCccCHHHhcc-CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCC-------------------
Confidence            4678999999654 479999999999999999998 9999976632 23332222111000                   


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                              .....+.++.+|+.+||..||.+||++.+++++
T Consensus       296 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          296 --------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence                    012367889999999999999999999999854

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.72  E-value=1.2e-17  Score=110.83  Aligned_cols=92  Identities=17%  Similarity=0.118  Sum_probs=69.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++. ...++.++|+||+|+++++|++ |..||...........+.....+                     
T Consensus       175 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~---------------------  232 (287)
T 1u59_A          175 WPLKWYAPECIN-FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---------------------  232 (287)
T ss_dssp             CCGGGCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC---------------------
T ss_pred             ccccccCHHHhc-cCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcC---------------------
Confidence            467899999964 4478999999999999999998 99999766444433333221110                     


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIG  121 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~  121 (142)
                            .....++.++.+++.+||..||++||++.+++++-
T Consensus       233 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          233 ------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             ------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             ------CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence                  01124788999999999999999999999998653

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.72  E-value=1.2e-17  Score=111.82  Aligned_cols=91  Identities=22%  Similarity=0.283  Sum_probs=68.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++.+ ..++.++||||+|+++|+|++ |..||.+.........+.......                    
T Consensus       214 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--------------------  272 (314)
T 2ivs_A          214 IPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRME--------------------  272 (314)
T ss_dssp             SCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC--------------------
T ss_pred             CcccccChhhhcC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCC--------------------
Confidence            4667999999654 478999999999999999999 999997665444433332211100                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                             ....++.++.+|+.+||..||++||++.+++++
T Consensus       273 -------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          273 -------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                   012378899999999999999999999998853

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.72  E-value=1e-17  Score=110.02  Aligned_cols=91  Identities=22%  Similarity=0.224  Sum_probs=67.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++. ...++.++|+||+|+++++|++ |..||...........+........                   
T Consensus       167 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------  226 (268)
T 3sxs_A          167 FPVKWSAPEVFH-YFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYR-------------------  226 (268)
T ss_dssp             CCGGGCCHHHHH-HSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC-------------------
T ss_pred             cCcccCCHHHHh-ccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCC-------------------
Confidence            456799999954 4478899999999999999998 9999976654443332221111000                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                              ....+.++.+++.+||..||++||++.+++++
T Consensus       227 --------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          227 --------PHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             --------CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             --------CCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                    01257789999999999999999999999853

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.72  E-value=2.3e-17  Score=110.97  Aligned_cols=91  Identities=19%  Similarity=0.240  Sum_probs=68.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|+.|+|||++.+ ..++.++|+||+|+++|+|++ |..||...........+.......                    
T Consensus       202 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------  260 (322)
T 1p4o_A          202 LPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD--------------------  260 (322)
T ss_dssp             ECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCC--------------------
T ss_pred             CCCCccChhhhcc-CCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCC--------------------
Confidence            4677999999654 478999999999999999999 889997665544433322111100                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                             ....++.++.+|+.+||..||++||++.+++++
T Consensus       261 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          261 -------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                   012377889999999999999999999998864

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.72  E-value=1.2e-17  Score=112.92  Aligned_cols=89  Identities=16%  Similarity=0.209  Sum_probs=67.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++.+ ..++.++||||+|+++|+|++ |..||...........+......+.                   
T Consensus       216 ~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------  275 (325)
T 3kul_A          216 IPIRWTAPEAIAF-RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-------------------  275 (325)
T ss_dssp             CCGGGSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC-------------------
T ss_pred             CcccccCHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCC-------------------
Confidence            4567999999654 478999999999999999998 9999976655444333322111110                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                              ...++.++.+|+.+||..||++||++.+++
T Consensus       276 --------~~~~~~~l~~li~~~l~~dp~~Rps~~eil  305 (325)
T 3kul_A          276 --------PMGCPHALHQLMLDCWHKDRAQRPRFSQIV  305 (325)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             --------CCCcCHHHHHHHHHHccCChhhCcCHHHHH
Confidence                    123778899999999999999999999987

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.71  E-value=1.5e-17  Score=109.06  Aligned_cols=90  Identities=18%  Similarity=0.193  Sum_probs=67.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++. ...++.++|+||+|+++|+|++ |..||...........+.......                    
T Consensus       167 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~--------------------  225 (267)
T 3t9t_A          167 FPVKWASPEVFS-FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY--------------------  225 (267)
T ss_dssp             CCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC--------------------
T ss_pred             ccccccChhhhc-CCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCC--------------------
Confidence            456799999955 4478999999999999999999 899997664443332222110000                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             .....+.++.+++.+||..||++||++.++++
T Consensus       226 -------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  257 (267)
T 3t9t_A          226 -------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLR  257 (267)
T ss_dssp             -------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CCccCcHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                   01225778999999999999999999999884

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.71  E-value=2.8e-17  Score=109.23  Aligned_cols=90  Identities=17%  Similarity=0.181  Sum_probs=68.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||.+. ...++.++|+||+|+++|+|++ |..||...........+.....+.                    
T Consensus       182 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------  240 (291)
T 1xbb_A          182 WPVKWYAPECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG--------------------  240 (291)
T ss_dssp             CCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC--------------------
T ss_pred             CCceeeChHHhc-cCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC--------------------
Confidence            457799999964 4478899999999999999998 999998765554444333211110                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....++.++.+++.+||..||++||++.++++
T Consensus       241 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          241 -------CPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             -------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                   01237889999999999999999999999873

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.71  E-value=1.9e-17  Score=109.90  Aligned_cols=91  Identities=19%  Similarity=0.224  Sum_probs=68.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++.+ ..++.++|+||+|+++++|++ |..||...........+.........                  
T Consensus       186 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------  246 (291)
T 1u46_A          186 VPFAWCAPESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR------------------  246 (291)
T ss_dssp             CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC------------------
T ss_pred             CCceeeCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCC------------------
Confidence            4667999999654 478899999999999999999 99999766544433322211111000                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                              ...++.++.+++.+||..||.+||++.++++
T Consensus       247 --------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          247 --------PEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                    1237888999999999999999999999884

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.71  E-value=3.4e-17  Score=110.95  Aligned_cols=90  Identities=20%  Similarity=0.193  Sum_probs=68.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|+.|+|||++.+. .++.++|+||+|+++|+|++ |..||.+.........+.......                    
T Consensus       238 ~t~~y~aPE~~~~~-~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--------------------  296 (343)
T 1luf_A          238 IPIRWMPPESIFYN-RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILA--------------------  296 (343)
T ss_dssp             BCGGGCCHHHHHHC-CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCC--------------------
T ss_pred             ccceecChhhhccC-CcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCC--------------------
Confidence            56789999996544 79999999999999999998 999997665444333222111100                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....++.++.+|+.+||..||++||++.++++
T Consensus       297 -------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~  328 (343)
T 1luf_A          297 -------CPENCPLELYNLMRLCWSKLPADRPSFCSIHR  328 (343)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                   01236788999999999999999999999873

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.71  E-value=1.8e-17  Score=114.07  Aligned_cols=88  Identities=20%  Similarity=0.291  Sum_probs=67.4

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |..|+|||++.+ ..++.++||||+|+++|||++ |..||...........+......+.                    
T Consensus       278 ~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  336 (377)
T 3cbl_A          278 PVKWTAPEALNY-GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPC--------------------  336 (377)
T ss_dssp             EGGGSCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCC--------------------
T ss_pred             CcCcCCHhHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC--------------------
Confidence            556999999654 478999999999999999998 9999977655544443332211110                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                             ...++.++.+|+.+||..||++|||+++++
T Consensus       337 -------~~~~~~~l~~li~~cl~~dP~~Rps~~~i~  366 (377)
T 3cbl_A          337 -------PELCPDAVFRLMEQCWAYEPGQRPSFSTIY  366 (377)
T ss_dssp             -------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             -------CCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence                   123677899999999999999999999987

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.71  E-value=2.8e-17  Score=115.57  Aligned_cols=89  Identities=16%  Similarity=0.233  Sum_probs=67.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++.. ..++.++||||+|+++|+|++ |..||.+.........+......+.                   
T Consensus       347 ~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~-------------------  406 (454)
T 1qcf_A          347 FPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-------------------  406 (454)
T ss_dssp             SCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCC-------------------
T ss_pred             ccccccCHHHhcc-CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            4567999999654 479999999999999999998 9999987654443333222111110                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                              ...++.++.+|+.+||..||++|||+++++
T Consensus       407 --------~~~~~~~l~~li~~cl~~dp~~RPt~~~i~  436 (454)
T 1qcf_A          407 --------PENCPEELYNIMMRCWKNRPEERPTFEYIQ  436 (454)
T ss_dssp             --------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             --------CCCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence                    123678899999999999999999999886

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.71  E-value=2e-17  Score=112.71  Aligned_cols=98  Identities=6%  Similarity=-0.043  Sum_probs=68.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC--hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|+|||++. ...++.++||||+|+++|+|++|+.||....  ...................               
T Consensus       230 gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---------------  293 (352)
T 2jii_A          230 GDLEFISMDLHK-GCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFV---------------  293 (352)
T ss_dssp             SCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEE---------------
T ss_pred             CCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhh---------------
Confidence            688999999955 4489999999999999999999999997552  2222222221111111000               


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                          ........++.++.+|+.+||..||++||+++++++
T Consensus       294 ----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          294 ----GPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             ----CTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ----hhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence                000012346889999999999999999999999873

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.71  E-value=6.5e-17  Score=108.30  Aligned_cols=98  Identities=19%  Similarity=0.286  Sum_probs=68.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh--hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||..|+|||++. ...++.++|+||+|+++++|++|..||.+...  ......+.....+...                 
T Consensus       198 ~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------  259 (310)
T 2wqm_A          198 GTPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLP-----------------  259 (310)
T ss_dssp             -CCSSCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCC-----------------
T ss_pred             CCeeEeChHHhC-CCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCc-----------------
Confidence            678899999954 44889999999999999999999999965522  2222222211111000                 


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                               ...++.++.+|+.+||..||++||++.+++  ..+.++..
T Consensus       260 ---------~~~~~~~l~~li~~~l~~dp~~Rps~~~il--~~l~~l~~  297 (310)
T 2wqm_A          260 ---------SDHYSEELRQLVNMCINPDPEKRPDVTYVY--DVAKRMHA  297 (310)
T ss_dssp             ---------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHH--HHHHHHHH
T ss_pred             ---------ccccCHHHHHHHHHHcCCChhhCCCHHHHH--HHHHHHHH
Confidence                     123678899999999999999999999988  34454443

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.70  E-value=3.5e-17  Score=109.74  Aligned_cols=90  Identities=20%  Similarity=0.197  Sum_probs=67.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|+.|+|||.+. ...++.++|+||+|+++|+|++ |..||...........+.....  ..                  
T Consensus       211 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~------------------  269 (313)
T 3brb_A          211 MPVKWIAIESLA-DRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHR--LK------------------  269 (313)
T ss_dssp             CCGGGSCHHHHH-SSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC--CC------------------
T ss_pred             CCccccCchhhc-CCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCC--CC------------------
Confidence            467899999955 4589999999999999999999 8889976644333222211110  00                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....++.++.+|+.+||..||.+||++.++++
T Consensus       270 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  301 (313)
T 3brb_A          270 -------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL  301 (313)
T ss_dssp             -------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             -------CCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                   01236788999999999999999999999874

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.70  E-value=1e-17  Score=113.21  Aligned_cols=96  Identities=14%  Similarity=0.063  Sum_probs=66.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+ ..++.++|+||+|+++|+|++|..||.+.........+..+..              ...      
T Consensus       179 gt~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~--------------~~~------  237 (330)
T 2izr_A          179 GTARYMSINTHLG-KEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD--------------TKR------  237 (330)
T ss_dssp             SCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHH--------------HHH------
T ss_pred             CCccccChHHHcC-CCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHh--------------hhc------
Confidence            7899999999554 5789999999999999999999999976532222111111000              000      


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                      ...........+ ++.+|+..||..||.+||+++++.+
T Consensus       238 ~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          238 ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             cCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            000111122244 8999999999999999999988764

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.70  E-value=3.6e-17  Score=110.55  Aligned_cols=90  Identities=22%  Similarity=0.292  Sum_probs=66.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      +|..|+|||++.+ ..++.++||||+|+++|+|++ |..||.+.. ................                  
T Consensus       228 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------  288 (333)
T 2i1m_A          228 LPVKWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ------------------  288 (333)
T ss_dssp             ECGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCC------------------
T ss_pred             CCccccCHHHhcc-CCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCC------------------
Confidence            4567999999654 479999999999999999998 889997663 2333333222111100                  


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                               ....+.++.+|+.+||..||.+||++.++++
T Consensus       289 ---------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          289 ---------PAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             ---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------CCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence                     1225778999999999999999999999984

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.70  E-value=4.4e-17  Score=107.98  Aligned_cols=90  Identities=19%  Similarity=0.282  Sum_probs=67.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++.+. .++.++|+||+|+++++|++ |..||...........+.......                    
T Consensus       174 ~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------  232 (288)
T 3kfa_A          174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME--------------------  232 (288)
T ss_dssp             ECGGGCCHHHHHHC-CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC--------------------
T ss_pred             cccCcCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCC--------------------
Confidence            45679999996544 78999999999999999999 899997665444433332111100                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....++.++.+|+.+||..||.+||+++++++
T Consensus       233 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          233 -------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence                   01236788999999999999999999999874

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.70  E-value=5.8e-17  Score=113.85  Aligned_cols=90  Identities=21%  Similarity=0.249  Sum_probs=67.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++.+ ..++.++||||+|+++|+|++ |..||...........+.......                    
T Consensus       348 ~~~~y~aPE~~~~-~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~--------------------  406 (450)
T 1k9a_A          348 LPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD--------------------  406 (450)
T ss_dssp             CCTTTSCHHHHHS-SCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCC--------------------
T ss_pred             CCcceeCHHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--------------------
Confidence            4678999999654 489999999999999999998 999997653333222222111000                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....++.++.+||.+||..||++|||+.++++
T Consensus       407 -------~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          407 -------APDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                   01237889999999999999999999999873

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.70  E-value=4.1e-17  Score=110.44  Aligned_cols=90  Identities=19%  Similarity=0.267  Sum_probs=68.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++.+ ..++.++||||+|+++|+|++ |..||.+.........+.......                    
T Consensus       221 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~--------------------  279 (334)
T 2pvf_A          221 LPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD--------------------  279 (334)
T ss_dssp             CCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCC--------------------
T ss_pred             cccceeChHHhcC-CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCC--------------------
Confidence            4567999999654 478999999999999999999 999997765544433332211110                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....++.++.+++.+||..||.+||++.++++
T Consensus       280 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  311 (334)
T 2pvf_A          280 -------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVE  311 (334)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                   01236788999999999999999999999874

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.70  E-value=3.9e-17  Score=108.86  Aligned_cols=97  Identities=14%  Similarity=0.189  Sum_probs=67.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+ ..++.++|+||+|+++|+|++|+.||.+.........  ....                     ..
T Consensus       174 gt~~y~aPE~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~--~~~~---------------------~~  229 (294)
T 4eqm_A          174 GTVQYFSPEQAKG-EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK--HIQD---------------------SV  229 (294)
T ss_dssp             -CCSSCCHHHHHT-CCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHH--HHSS---------------------CC
T ss_pred             cCccccCHhHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH--Hhhc---------------------cC
Confidence            6889999999654 4789999999999999999999999976644332111  1111                     01


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCC
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGT  122 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~  122 (142)
                      ..........++..+.+++.+||..||.+||+..+.+.+.|
T Consensus       230 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l  270 (294)
T 4eqm_A          230 PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDL  270 (294)
T ss_dssp             CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHH
T ss_pred             CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHH
Confidence            11112233557889999999999999999995444444443

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.70  E-value=4.1e-17  Score=109.41  Aligned_cols=92  Identities=17%  Similarity=0.251  Sum_probs=65.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++. ...++.++|+||+|+++|+|++|..||...........+.....                       
T Consensus       197 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-----------------------  252 (309)
T 2h34_A          197 GTLYYMAPERFS-ESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIP-----------------------  252 (309)
T ss_dssp             CCGGGCCGGGTC-C----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCC-----------------------
T ss_pred             CCcCccCHHHHc-CCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCC-----------------------
Confidence            678899999954 44788899999999999999999999976644333332221110                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-CHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-TANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-t~~~~l~  119 (142)
                        ........++.++.++|.+||..||++|| +++++++
T Consensus       253 --~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          253 --RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             --CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             --CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence              01112245788999999999999999999 8887763

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.70  E-value=1.1e-16  Score=108.50  Aligned_cols=90  Identities=14%  Similarity=0.176  Sum_probs=67.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++. ...++.++||||+|+++|+|++ |..||...........+......+.                   
T Consensus       212 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------  271 (333)
T 1mqb_A          212 IPIRWTAPEAIS-YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPT-------------------  271 (333)
T ss_dssp             CCGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             ccccccCchhcc-cCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCC-------------------
Confidence            466799999965 4489999999999999999998 9999976654433332221111000                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                              ...++.++.+++.+||..||++||++.++++
T Consensus       272 --------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  302 (333)
T 1mqb_A          272 --------PMDCPSAIYQLMMQCWQQERARRPKFADIVS  302 (333)
T ss_dssp             --------CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             --------cccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                    1236778999999999999999999998874

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=4.5e-17  Score=112.02  Aligned_cols=90  Identities=16%  Similarity=0.231  Sum_probs=65.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++. ...++.++||||+|+++|+|++ |.+||...........+........                   
T Consensus       258 ~~~~y~aPE~~~-~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~-------------------  317 (373)
T 3c1x_A          258 LPVKWMALESLQ-TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-------------------  317 (373)
T ss_dssp             CCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCC-------------------
T ss_pred             CcccccChHHhc-CCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            456799999965 4489999999999999999999 6778865533222222111110000                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                              ...++.++.+++.+||..||++||++.++++
T Consensus       318 --------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~  348 (373)
T 3c1x_A          318 --------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  348 (373)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                    1236788999999999999999999999874

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.69  E-value=5.1e-17  Score=114.23  Aligned_cols=90  Identities=19%  Similarity=0.252  Sum_probs=67.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++.+. .++.++||||+|+++|+|++ |..||.+.........+......+                    
T Consensus       343 ~~~~y~aPE~~~~~-~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~--------------------  401 (452)
T 1fmk_A          343 FPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--------------------  401 (452)
T ss_dssp             CCGGGSCHHHHHHC-CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC--------------------
T ss_pred             ccccccCHhHHhcC-CCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--------------------
Confidence            45679999996544 89999999999999999999 899997664443332222111100                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....++.++.+|+.+||..||++|||++++++
T Consensus       402 -------~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          402 -------CPPECPESLHDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             -------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                   01237788999999999999999999999874

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.69  E-value=3.3e-17  Score=110.58  Aligned_cols=90  Identities=26%  Similarity=0.221  Sum_probs=67.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++. ...++.++|+||+|+++|+|++ |..||.+.........+......                     
T Consensus       203 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~---------------------  260 (327)
T 1fvr_A          203 LPVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL---------------------  260 (327)
T ss_dssp             CCTTTCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCC---------------------
T ss_pred             CCccccChhhhc-cccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCC---------------------
Confidence            467899999954 4478999999999999999998 99999766544332222110000                     


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            .....++.++.+|+.+||..||.+||+++++++
T Consensus       261 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  293 (327)
T 1fvr_A          261 ------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV  293 (327)
T ss_dssp             ------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                  001236788999999999999999999999885

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.69  E-value=4.9e-18  Score=114.55  Aligned_cols=111  Identities=16%  Similarity=0.088  Sum_probs=63.6

Q ss_pred             ccCcccchhhhcCC----CCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICS----SVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~----~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||+.|+|||++.+.    ..++.++||||+||++|+|++|..||.+...............     .+..........  
T Consensus       195 gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--  267 (322)
T 3soc_A          195 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ-----HPSLEDMQEVVV--  267 (322)
T ss_dssp             CCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS-----SCCHHHHHHHHT--
T ss_pred             cCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc-----CCchhhhhhhhh--
Confidence            68899999997653    2455678999999999999999999975421100000000000     000000000000  


Q ss_pred             CCCCCchhHhhh--cCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           78 PQCEPADLAEKT--HGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        78 ~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                      ...........+  ...+.++.+|+.+||..||++|||+.++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          268 HKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             TSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            000000000000  112345899999999999999999999873

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.69  E-value=6.2e-17  Score=106.89  Aligned_cols=90  Identities=21%  Similarity=0.271  Sum_probs=66.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++. ...++.++|+||+|+++++|++ |..||...........+.....  .                   
T Consensus       176 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~--~-------------------  233 (278)
T 1byg_A          176 LPVKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK--M-------------------  233 (278)
T ss_dssp             CCTTTSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC--C-------------------
T ss_pred             ccccccCHHHhC-CCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC--C-------------------
Confidence            567899999955 4488999999999999999998 9999976543333222211000  0                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            ......+.++.+++.+||..||++||++.++++
T Consensus       234 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          234 ------DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence                  001236788999999999999999999999873

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.69  E-value=1.7e-17  Score=111.35  Aligned_cols=92  Identities=27%  Similarity=0.426  Sum_probs=64.3

Q ss_pred             ccCcccchhhhcCCC--CCChhhhHHHHHHHHHHHHhCCCCcCCC--ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSS--VYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~--~~~~~~Diws~g~~l~~l~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||..|+|||++.+..  .++.++||||+|+++|+|++|..||...  ...........  ....                
T Consensus       205 gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~~~~----------------  266 (317)
T 2buj_A          205 CTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN--QLSI----------------  266 (317)
T ss_dssp             SCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC--C--C----------------
T ss_pred             CCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc--cCCC----------------
Confidence            588899999965432  3688999999999999999999998532  11111111110  0000                


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                      +         .....+.++.+||.+||..||.+||++++++++
T Consensus       267 ~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          267 P---------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             C---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             C---------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            0         012367889999999999999999999999853

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.69  E-value=8.7e-17  Score=107.11  Aligned_cols=90  Identities=16%  Similarity=0.224  Sum_probs=64.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|+.|+|||.+.+ ..++.++|+||+|+++++|++ +.+||....................                   
T Consensus       194 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  253 (298)
T 3f66_A          194 LPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-------------------  253 (298)
T ss_dssp             BCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCC-------------------
T ss_pred             CCccccChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCC-------------------
Confidence            5678999999654 478999999999999999999 5666755533222222111111000                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                              ...++.++.+++.+||..||++||++.++++
T Consensus       254 --------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          254 --------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                    0226778999999999999999999999874

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.69  E-value=1.3e-16  Score=116.24  Aligned_cols=90  Identities=17%  Similarity=0.181  Sum_probs=69.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++. ...++.++||||+|+++|+|++ |..||.+.........+........                   
T Consensus       534 ~t~~y~APE~~~-~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~-------------------  593 (635)
T 4fl3_A          534 WPVKWYAPECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC-------------------  593 (635)
T ss_dssp             -CGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             CceeeeChhhhc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            467799999964 4489999999999999999998 9999987755544444332211110                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                              ...++.++.+||.+||..||++||+++++++
T Consensus       594 --------p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          594 --------PAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             --------CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                    1237889999999999999999999999863

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=1.6e-16  Score=105.67  Aligned_cols=90  Identities=19%  Similarity=0.186  Sum_probs=65.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCC-CCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK-PLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||.+. ...++.++|+||+|+++|+|++|. ++|...........+......+.                   
T Consensus       190 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  249 (298)
T 3pls_A          190 LPVKWTALESLQ-TYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQ-------------------  249 (298)
T ss_dssp             CGGGGSCHHHHT-TCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCC-------------------
T ss_pred             CCccccChhhhc-cCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCC-------------------
Confidence            567899999954 558899999999999999999955 55544444443333322111111                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                              ....+.++.+|+.+||..||.+|||+.++++
T Consensus       250 --------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          250 --------PEYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                    1236778999999999999999999999873

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.68  E-value=4.3e-17  Score=110.03  Aligned_cols=89  Identities=20%  Similarity=0.319  Sum_probs=52.7

Q ss_pred             ccCcccchhhhc--CCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRI--CSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~--~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|+|||++.  ....++.++||||+|+++|+|++|..||........  .......+                    
T Consensus       212 ~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~--------------------  269 (337)
T 3ll6_A          212 TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI--VNGKYSIP--------------------  269 (337)
T ss_dssp             ------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------CCCC--------------------
T ss_pred             CCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh--hcCcccCC--------------------
Confidence            678899999953  345788999999999999999999999964422111  00000000                    


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                              .....+..+.+|+.+||..||++||++.+++++
T Consensus       270 --------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          270 --------PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             --------TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             --------cccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                    012256678999999999999999999999865

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.68  E-value=1.5e-16  Score=115.50  Aligned_cols=89  Identities=17%  Similarity=0.139  Sum_probs=67.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|+.|+|||++. ...++.++||||+|+++|||++ |..||...........+.......                    
T Consensus       501 ~~~~y~APE~~~-~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~--------------------  559 (613)
T 2ozo_A          501 WPLKWYAPECIN-FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME--------------------  559 (613)
T ss_dssp             -CCTTSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCC--------------------
T ss_pred             CccceeCHhhhc-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC--------------------
Confidence            357899999965 4489999999999999999998 999998764443333332211100                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                             ....++.++.+||.+||..||++||++.+++
T Consensus       560 -------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~  590 (613)
T 2ozo_A          560 -------CPPECPPELYALMSDCWIYKWEDRPDFLTVE  590 (613)
T ss_dssp             -------CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHH
T ss_pred             -------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence                   0123788999999999999999999999875

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.68  E-value=3.9e-17  Score=115.61  Aligned_cols=95  Identities=8%  Similarity=0.037  Sum_probs=67.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh-HHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD-HLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++.+ ..++.++||||+||++|+|++|..||.+.... ....+......             .        
T Consensus       175 gt~~Y~aPE~~~~-~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~-------------~--------  232 (483)
T 3sv0_A          175 GTARYASVNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK-------------K--------  232 (483)
T ss_dssp             SCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH-------------H--------
T ss_pred             CCccccCHHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc-------------c--------
Confidence            6889999999654 47999999999999999999999999765221 11111110000             0        


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                      ...........++.++.+|+.+||..+|.+||++++++
T Consensus       233 ~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~  270 (483)
T 3sv0_A          233 VATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLK  270 (483)
T ss_dssp             HHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred             ccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHH
Confidence            00112233356788999999999999999999998765

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.68  E-value=1e-16  Score=106.83  Aligned_cols=100  Identities=19%  Similarity=0.111  Sum_probs=62.8

Q ss_pred             ccCcccchhhhcCCC-----CCChhhhHHHHHHHHHHHHhC----------CCCcCCC--ChhHHHHHHHHhCCCCCCCC
Q 048170            2 VEFPYKAPESRICSS-----VYMTPHDVWAVGCIFAEMVSG----------KPLFPCG--KKDHLSLIVRLFGNPTKETW   64 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~-----~~~~~~Diws~g~~l~~l~~g----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~   64 (142)
                      ||+.|+|||++.+..     .++.++||||+|+++|+|++|          ..||...  .......+.......     
T Consensus       179 gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~-----  253 (301)
T 3q4u_A          179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVD-----  253 (301)
T ss_dssp             CCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS-----
T ss_pred             cccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhcc-----
Confidence            688999999965443     234789999999999999999          7777543  111111111111100     


Q ss_pred             CCccchHHHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                                   ......+........+.++.+|+.+||..||++|||+.++++
T Consensus       254 -------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          254 -------------QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             -------------CCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             -------------CCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence                         000000000011124567899999999999999999999874

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.68  E-value=7.3e-17  Score=110.46  Aligned_cols=96  Identities=9%  Similarity=0.096  Sum_probs=66.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHH-HHHHhCCCCCCCCCCccchHHHh-hcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSL-IVRLFGNPTKETWPGANYISELL-HSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~   78 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|+.||.+. ....... ......          ....... ..+.
T Consensus       223 gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~  291 (364)
T 3op5_A          223 GTIEFTSIDAHN-GVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYR----------ENIASLMDKCFP  291 (364)
T ss_dssp             CCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHH----------HCHHHHHHHHSC
T ss_pred             CCCCccCHHHhC-CCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhh----------hhHHHHHHHhcc
Confidence            889999999955 447999999999999999999999999754 2111111 111000          0000000 0000


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                                ....+.++.+|+..|+..||.+||++.+++
T Consensus       292 ----------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~  321 (364)
T 3op5_A          292 ----------AANAPGEIAKYMETVKLLDYTEKPLYENLR  321 (364)
T ss_dssp             ----------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred             ----------cccCHHHHHHHHHHHhcCCCCCCCCHHHHH
Confidence                      034788999999999999999999999876

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.68  E-value=6.9e-17  Score=111.04  Aligned_cols=89  Identities=15%  Similarity=0.172  Sum_probs=64.9

Q ss_pred             cCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            3 EFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         3 t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      |..|+|||++. ...++.++||||+|+++|+|++ |..||...........+......+.                    
T Consensus       213 ~~~y~aPE~~~-~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~--------------------  271 (373)
T 2qol_A          213 PIRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP--------------------  271 (373)
T ss_dssp             -CTTSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCC--------------------
T ss_pred             CCCccChhhhc-cCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC--------------------
Confidence            56799999965 4489999999999999999997 9999976654443333221100000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ...++.++.+|+.+||..||++||++.++++
T Consensus       272 -------~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          272 -------PMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             -------CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence                   1236778999999999999999999998763

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.68  E-value=6.9e-17  Score=106.66  Aligned_cols=90  Identities=17%  Similarity=0.225  Sum_probs=66.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++. ...++.++|+||+|+++++|++ |..||.+.........+......  .                  
T Consensus       172 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~------------------  230 (279)
T 1qpc_A          172 FPIKWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM--V------------------  230 (279)
T ss_dssp             CCTTTSCHHHHH-HCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC--C------------------
T ss_pred             CccCccChhhhc-cCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC--C------------------
Confidence            456799999964 3478899999999999999999 89999766444332222211000  0                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             .....+.++.+|+.+||..||++||+++++++
T Consensus       231 -------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          231 -------RPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence                   01236788999999999999999999999874

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.68  E-value=3.8e-17  Score=109.52  Aligned_cols=98  Identities=18%  Similarity=0.096  Sum_probs=68.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++||||+|+++|+|++|..|+.......               .............     
T Consensus       184 gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~---------------~~~~~~~~~~~~~-----  242 (310)
T 3s95_A          184 GNPYWMAPEMIN-GRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT---------------MDFGLNVRGFLDR-----  242 (310)
T ss_dssp             SCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBC---------------TTSSBCHHHHHHH-----
T ss_pred             CCcceeCHHHhc-CCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhH---------------HHHhhhhhccccc-----
Confidence            688899999955 4588999999999999999999998885331100               0000000010000     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                           .....++.++.+|+.+||..||++||++.++++  ++..+.
T Consensus       243 -----~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~--~L~~l~  281 (310)
T 3s95_A          243 -----YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH--WLETLR  281 (310)
T ss_dssp             -----TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH--HHHHHH
T ss_pred             -----cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH--HHHHHH
Confidence                 012347889999999999999999999999884  555443

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.67  E-value=9.2e-17  Score=114.06  Aligned_cols=90  Identities=20%  Similarity=0.295  Sum_probs=67.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++.+ ..++.++||||+|+++|+|++ |..||.+.........+......                     
T Consensus       381 ~~~~y~aPE~~~~-~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---------------------  438 (495)
T 1opk_A          381 FPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM---------------------  438 (495)
T ss_dssp             CCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC---------------------
T ss_pred             CCcceeCHhHHhc-CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---------------------
Confidence            3567999999654 478999999999999999998 89999766544433332211000                     


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            .....++.++.+||.+||..||++||++.++++
T Consensus       439 ------~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          439 ------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence                  001237789999999999999999999999874

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.67  E-value=6.6e-17  Score=107.91  Aligned_cols=95  Identities=15%  Similarity=0.159  Sum_probs=64.4

Q ss_pred             CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCCchhHhhhcCCCc
Q 048170           15 SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEPADLAEKTHGLEP   94 (142)
Q Consensus        15 ~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (142)
                      ...++.++|+||+||++|+|++|..||.........   .       ..          ...+..............++.
T Consensus       172 ~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~---~-------~~----------~~~~~~~~~~~~~~~~~~~~~  231 (299)
T 3m2w_A          172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS---P-------GM----------KTRIRMGQYEFPNPEWSEVSE  231 (299)
T ss_dssp             TCGGGGHHHHHHHHHHHHHHHHSSCSCCC----------C-------CS----------CCSSCTTCCSSCHHHHTTSCH
T ss_pred             cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh---H-------HH----------HHHHhhccccCCchhcccCCH
Confidence            346788999999999999999999999644221110   0       00          000011111111222355889


Q ss_pred             hHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           95 SGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        95 ~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ++.+|+.+||..||++||+++++++||||.+....
T Consensus       232 ~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~  266 (299)
T 3m2w_A          232 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV  266 (299)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGS
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhcChhhcccccC
Confidence            99999999999999999999999999999876543

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.67  E-value=7.3e-18  Score=113.52  Aligned_cols=103  Identities=16%  Similarity=0.108  Sum_probs=65.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh----HHHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD----HLSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      ||..|+|||++.+. .++.++||||+|+++|+|++|+.||......    ................            ..
T Consensus       203 gt~~y~aPE~~~~~-~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~  269 (321)
T 2qkw_B          203 GTLGYIDPEYFIKG-RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ------------IV  269 (321)
T ss_dssp             EETTTCCHHHHHHC-BCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCS------------SS
T ss_pred             CCccccCHHHhcCC-CCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHH------------hc
Confidence            67889999996544 7899999999999999999999999654211    1110000000000000            00


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                      ..   ..........+.++.+++.+||..||++||++.+++++
T Consensus       270 ~~---~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          270 DP---NLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             SS---SCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             Ch---hhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            00   00000111245678899999999999999999999853

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.67  E-value=1.2e-16  Score=107.93  Aligned_cols=100  Identities=14%  Similarity=0.037  Sum_probs=60.7

Q ss_pred             ccCcccchhhhcCCCCCCh------hhhHHHHHHHHHHHHhC----------CCCcCCCC--hhHHHHHHHHhCCCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMT------PHDVWAVGCIFAEMVSG----------KPLFPCGK--KDHLSLIVRLFGNPTKET   63 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~------~~Diws~g~~l~~l~~g----------~~~~~~~~--~~~~~~~~~~~~~~~~~~   63 (142)
                      ||+.|+|||++.+. ....      ++||||+||++|+|++|          +.||....  ......+......     
T Consensus       208 gt~~y~aPE~~~~~-~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----  281 (337)
T 3mdy_A          208 GTKRYMPPEVLDES-LNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCI-----  281 (337)
T ss_dssp             SCGGGCCHHHHTTC-CCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT-----
T ss_pred             cCcceeChhhcccc-cCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhh-----
Confidence            68899999996544 3333      49999999999999999          55554320  0001111110000     


Q ss_pred             CCCccchHHHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           64 WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                                 ....  ...+.......++.++.+|+.+||..||++||++.+++++
T Consensus       282 -----------~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          282 -----------KKLR--PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             -----------SCCC--CCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             -----------hccC--ccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                       0000  0000000011245678999999999999999999999853

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.67  E-value=1.5e-16  Score=105.85  Aligned_cols=106  Identities=17%  Similarity=0.230  Sum_probs=66.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +|..|+|||++.+. .++.++||||+|+++++|++|..|+.......    ....+......    .........+....
T Consensus       179 ~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~~  249 (295)
T 3ugc_A          179 SPIFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIEKSKSPPAEF----MRMIGNDKQGQ----MIVFHLIELLKNNG  249 (295)
T ss_dssp             CGGGGCCHHHHHHC-CCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHH----HHHHCTTCCTH----HHHHHHHHHHHTTC
T ss_pred             CccceeCcHHhcCC-CCChHHHHHHHHHHHHHHHhcccccCCChHHH----HhhhcCccccc----hhHHHHHHHHhccC
Confidence            45679999996544 79999999999999999999988885331111    11111111000    00000000000000


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                      .   ......++.++.+|+.+||..||++|||+.++++
T Consensus       250 ~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          250 R---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             C---CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             c---CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            0   0012347889999999999999999999999873

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.67  E-value=1.4e-16  Score=105.30  Aligned_cols=90  Identities=21%  Similarity=0.199  Sum_probs=66.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++|+||+|+++++|++|..++...     ...........                     
T Consensus       183 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~~~~~~~~~~~---------------------  235 (284)
T 2a19_B          183 GTLRYMSPEQIS-SQDYGKEVDLYALGLILAELLHVCDTAFET-----SKFFTDLRDGI---------------------  235 (284)
T ss_dssp             SCCTTSCHHHHH-CSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----HHHHHHHHTTC---------------------
T ss_pred             CcccccChhhhc-cCCCcchhhhHHHHHHHHHHHhcCCcchhH-----HHHHHHhhccc---------------------
Confidence            688999999965 447899999999999999999998776311     11111110000                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                            ....++.++.+|+.+||..||++||++.+++++.+..
T Consensus       236 ------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          236 ------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             ------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ------ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                  0022677889999999999999999999999887643

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.66  E-value=1.5e-16  Score=113.96  Aligned_cols=90  Identities=19%  Similarity=0.252  Sum_probs=67.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++... .++.++||||+|+++|+|++ |..||.+.........+......+                    
T Consensus       426 ~~~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~--------------------  484 (535)
T 2h8h_A          426 FPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--------------------  484 (535)
T ss_dssp             SCGGGSCHHHHHHC-CCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCC--------------------
T ss_pred             CcccccCHHHhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--------------------
Confidence            45679999996544 79999999999999999999 899997664433332222111000                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                             ....++.++.+||.+||..||++||+++++++
T Consensus       485 -------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          485 -------CPPECPESLHDLMCQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                   01237788999999999999999999999874

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.66  E-value=7.6e-18  Score=116.57  Aligned_cols=113  Identities=14%  Similarity=0.227  Sum_probs=68.9

Q ss_pred             ccCcccchhhhcCC-------CCCChhhhHHHHHHHHHHHHhCCCCcCCCC--hhHHHHHHHHhCCCCCCCCCCccchHH
Q 048170            2 VEFPYKAPESRICS-------SVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKETWPGANYISE   72 (142)
Q Consensus         2 ~t~~y~~PE~~~~~-------~~~~~~~Diws~g~~l~~l~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (142)
                      ||..|+|||++.+.       ..++.++||||+||++|+|++|..||....  ......+.......+...+........
T Consensus       177 gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  256 (396)
T 4eut_A          177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAEN  256 (396)
T ss_dssp             SCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTT
T ss_pred             CCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccC
Confidence            68899999986541       467789999999999999999999996431  112222233333333222211111000


Q ss_pred             ----HhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           73 ----LLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        73 ----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                          +...++..     .......+..+.+++.+||..||++|++++++++
T Consensus       257 ~~~~~~~~~~~~-----~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          257 GPIDWSGDMPVS-----CSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             CCEEEESSCCTT-----CSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             CCcccCccCCcc-----cccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence                00111110     0111224567789999999999999999998753

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.66  E-value=4.1e-16  Score=114.03  Aligned_cols=90  Identities=19%  Similarity=0.248  Sum_probs=67.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|+.|+|||++. ...++.++||||+|+++|+|++ |..||.+.........+......+.                   
T Consensus       554 ~t~~y~aPE~~~-~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~-------------------  613 (656)
T 2j0j_A          554 LPIKWMAPESIN-FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM-------------------  613 (656)
T ss_dssp             CCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCC-------------------
T ss_pred             CCcceeCHHHhc-CCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            457899999965 4489999999999999999997 8999987654443332222111110                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                              ...++.++.+|+.+||..||++||++.++++
T Consensus       614 --------~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          614 --------PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                    1236788999999999999999999999874

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.66  E-value=4.6e-17  Score=109.74  Aligned_cols=104  Identities=13%  Similarity=0.103  Sum_probs=65.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC------ChhHHHHHHHHhCCCCCCCCCCccchHHHhh
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG------KKDHLSLIVRLFGNPTKETWPGANYISELLH   75 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (142)
                      ||+.|+|||++.+. .++.++||||+|+++|+|++|..||...      .............   .........     .
T Consensus       197 gt~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~  267 (326)
T 3uim_A          197 GTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK---EKKLEALVD-----V  267 (326)
T ss_dssp             SCGGGCCHHHHHHS-EECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTS---SCCSTTSSC-----T
T ss_pred             CCcCccCHHHhccC-CCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhh---chhhhhhcC-----h
Confidence            78899999996544 7899999999999999999999999521      1111111100000   000000000     0


Q ss_pred             cCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCC
Q 048170           76 SLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIG  121 (142)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~  121 (142)
                      ...       .......+.++.+++.+||..||.+|||+.+++++-
T Consensus       268 ~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L  306 (326)
T 3uim_A          268 DLQ-------GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML  306 (326)
T ss_dssp             TCT-------TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred             hhc-------cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence            000       000111346788999999999999999999988653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.65  E-value=8.2e-17  Score=108.64  Aligned_cols=105  Identities=18%  Similarity=0.214  Sum_probs=65.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++.+ ..++.++||||+|+++++|++|..||.........    ....  ....+............... 
T Consensus       192 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~-  263 (327)
T 3lxl_A          192 SPIFWYAPESLSD-NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLR----MMGC--ERDVPALSRLLELLEEGQRL-  263 (327)
T ss_dssp             SCGGGSCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH----HCC------CCHHHHHHHHHHTTCCC-
T ss_pred             ccccccCHHHhcc-CCCChHHhHHHHHHHHHHHHhCCCCCccccchhhh----hccc--ccccccHHHHHHHhhcccCC-
Confidence            5677999999654 47899999999999999999999998543221111    0000  00000000000000000000 


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           .....++.++.+|+.+||..||++||+++++++
T Consensus       264 -----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  296 (327)
T 3lxl_A          264 -----PAPPACPAEVHELMKLCWAPSPQDRPSFSALGP  296 (327)
T ss_dssp             -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                 011347889999999999999999999999863

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.64  E-value=4.2e-16  Score=103.90  Aligned_cols=105  Identities=15%  Similarity=0.273  Sum_probs=65.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++.+. .++.++|+||+|+++++|++|..|+...    ..............     .........+....
T Consensus       191 ~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  260 (302)
T 4e5w_A          191 SPVFWYAPECLMQS-KFYIASDVWSFGVTLHELLTYCDSDSSP----MALFLKMIGPTHGQ-----MTVTRLVNTLKEGK  260 (302)
T ss_dssp             CCGGGCCHHHHHHC-EEEHHHHHHHHHHHHHHHHTTTCGGGSH----HHHHHHHHCSCCGG-----GHHHHHHHHHHTTC
T ss_pred             CCccccCCeeecCC-CCCcchhHHHHHHHHHHHHHccCCCcch----hhHHhhccCCcccc-----cCHHHHHHHHhccC
Confidence            56779999996544 7889999999999999999998876322    11111211111100     01111111110000


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                      ..   .....++.++.+|+.+||..||.+|||+.++++
T Consensus       261 ~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          261 RL---PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             CC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CC---CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            00   011347889999999999999999999999873

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.63  E-value=1.5e-16  Score=107.56  Aligned_cols=119  Identities=17%  Similarity=0.083  Sum_probs=64.4

Q ss_pred             ccCcccchhhhcCC------CCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHH-HHHHHHhCCCCCCCCCCccchHHH
Q 048170            2 VEFPYKAPESRICS------SVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHL-SLIVRLFGNPTKETWPGANYISEL   73 (142)
Q Consensus         2 ~t~~y~~PE~~~~~------~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   73 (142)
                      ||+.|+|||++.+.      ..++.++||||+||++|+|++|..||... ..... ..+....+..+     ........
T Consensus       190 gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  264 (336)
T 3g2f_A          190 GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHP-----TFEDMQVL  264 (336)
T ss_dssp             SCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSC-----CHHHHHHH
T ss_pred             CccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCc-----hHHHHHhh
Confidence            78899999996542      34567899999999999999997666332 11000 00000000000     00000000


Q ss_pred             hhcCC-CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh------cCCCccc
Q 048170           74 LHSLP-QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL------CIGTSEK  125 (142)
Q Consensus        74 ~~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l------~~~~~~~  125 (142)
                      ..... ..............+.++.+||.+||..||++|||+++++      .++|-++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          265 VSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN  323 (336)
T ss_dssp             HTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred             hcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence            00000 0000000000011334689999999999999999999985      3566554

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.63  E-value=2.4e-16  Score=106.09  Aligned_cols=104  Identities=16%  Similarity=0.187  Sum_probs=65.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +|..|+|||++.+ ..++.++||||+|+++++|++|..||.........    .........  ............... 
T Consensus       199 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~-  270 (318)
T 3lxp_A          199 SPVFWYAPECLKE-YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE----LIGIAQGQM--TVLRLTELLERGERL-  270 (318)
T ss_dssp             CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH----HHCSCCHHH--HHHHHHHHHHTTCCC-
T ss_pred             CCceeeChHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh----hhcccccch--hHHHHHHHHhcccCC-
Confidence            5677999999654 47889999999999999999999998643211100    000000000  000000000000000 


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                           .....++.++.+|+.+||..||++||++.+++
T Consensus       271 -----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell  302 (318)
T 3lxp_A          271 -----PRPDKCPAEVYHLMKNCWETEASFRPTFENLI  302 (318)
T ss_dssp             -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             -----CCCccccHHHHHHHHHHcCCCcccCcCHHHHH
Confidence                 01134788999999999999999999999998

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.63  E-value=3.3e-16  Score=104.67  Aligned_cols=102  Identities=16%  Similarity=0.184  Sum_probs=64.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++. . .++.++|+||+|+++|+|++|..||..... .....+........       .....+...... 
T Consensus       197 g~~~y~aPE~~~-~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-  266 (307)
T 2nru_A          197 GTTAYMAPEALR-G-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEE-------KTIEDYIDKKMN-  266 (307)
T ss_dssp             SCGGGCCHHHHT-T-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTS-------CCHHHHSCSSCS-
T ss_pred             CCcCcCChHHhc-C-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhh-------hhhhhhcccccc-
Confidence            688999999854 3 578899999999999999999999975522 11111111110000       000111000000 


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            ......+..+.+++.+||..||++||++.++++
T Consensus       267 ------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~  299 (307)
T 2nru_A          267 ------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ  299 (307)
T ss_dssp             ------CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ------ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                  000113456889999999999999999999874

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.62  E-value=1.4e-15  Score=103.04  Aligned_cols=100  Identities=14%  Similarity=0.087  Sum_probs=61.8

Q ss_pred             ccCcccchhhhcCCCC-----CChhhhHHHHHHHHHHHHhC----------CCCcCCCCh--hHHHHHHHHhCC-CCCCC
Q 048170            2 VEFPYKAPESRICSSV-----YMTPHDVWAVGCIFAEMVSG----------KPLFPCGKK--DHLSLIVRLFGN-PTKET   63 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~-----~~~~~Diws~g~~l~~l~~g----------~~~~~~~~~--~~~~~~~~~~~~-~~~~~   63 (142)
                      ||..|+|||++.+...     ++.++||||+|+++|+|++|          ..||.....  .....+...... .....
T Consensus       213 gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (342)
T 1b6c_B          213 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPN  292 (342)
T ss_dssp             CCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCC
T ss_pred             cCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCC
Confidence            6889999999654422     23689999999999999999          667754311  111111111100 00000


Q ss_pred             CCCccchHHHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           64 WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                      .                 ....  .....+..+.+|+.+||..||++||++.+++++
T Consensus       293 ~-----------------~~~~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          293 I-----------------PNRW--QSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             C-----------------CGGG--GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             C-----------------cccc--cchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            0                 0000  001234567899999999999999999999853

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.59  E-value=1.3e-15  Score=102.74  Aligned_cols=106  Identities=18%  Similarity=0.211  Sum_probs=65.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      +|..|+|||++.+ ..++.++||||+|+++++|++|..|+.....    ......+........ .............. 
T Consensus       210 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~tg~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-  282 (326)
T 2w1i_A          210 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYIEKSKSPPA----EFMRMIGNDKQGQMI-VFHLIELLKNNGRL-  282 (326)
T ss_dssp             CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH----HHHHHHCTTCCTHHH-HHHHHHHHHTTCCC-
T ss_pred             CceeEECchhhcC-CCCCchhhHHHHHHHHHHHHhcCCCCCCCHH----HHHHhhccccchhhh-HHHHHHHhhcCCCC-
Confidence            4567999999654 4788999999999999999999888753211    111111111100000 00000000000000 


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                           .....++.++.+|+.+||..||++||++.++++
T Consensus       283 -----~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          283 -----PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             -----CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -----CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                 011347889999999999999999999999873

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.46  E-value=9e-15  Score=107.39  Aligned_cols=88  Identities=20%  Similarity=0.190  Sum_probs=64.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+.  .+.++||||+||++++|++|..+|.+....               ..             +  .
T Consensus       239 gt~~y~aPE~~~~~--~~~~sDi~slG~~l~~l~~g~~~~~~~~~~---------------~~-------------~--~  286 (681)
T 2pzi_A          239 GTPGFQAPEIVRTG--PTVATDIYTVGRTLAALTLDLPTRNGRYVD---------------GL-------------P--E  286 (681)
T ss_dssp             CCTTTSCTTHHHHC--SCHHHHHHHHHHHHHHHHSCCCEETTEECS---------------SC-------------C--T
T ss_pred             CCccccCHHHHcCC--CCCceehhhhHHHHHHHHhCCCCCcccccc---------------cc-------------c--c
Confidence            78999999996543  488999999999999999998887532100               00             0  0


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                      ....    ...+..+.+||.+||..||++||+..+.+.|+|+..
T Consensus       287 ~~~~----~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          287 DDPV----LKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             TCHH----HHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             cccc----cccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence            0000    113567899999999999999999888888887653

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.45  E-value=4e-15  Score=101.81  Aligned_cols=82  Identities=12%  Similarity=-0.011  Sum_probs=57.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||..|+|||++.+. .++.++||||+||++|+|++|+.||........                   .   ....+... 
T Consensus       247 gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-------------------~---~~~~~~~~-  302 (365)
T 3e7e_A          247 ETSGFQCVEMLSNK-PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-------------------K---PEGLFRRL-  302 (365)
T ss_dssp             CTTSCCCHHHHTTC-CBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-------------------E---ECSCCTTC-
T ss_pred             CCCCCCChHHhcCC-CCCccccHHHHHHHHHHHHhCCCccccCCCCce-------------------e---echhcccc-
Confidence            78999999996544 799999999999999999999999853311000                   0   00000000 


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHH
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAND  116 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~  116 (142)
                               ..+....+++..||..+|.+|+...+
T Consensus       303 ---------~~~~~~~~~~~~~l~~~p~~r~~~~~  328 (365)
T 3e7e_A          303 ---------PHLDMWNEFFHVMLNIPDCHHLPSLD  328 (365)
T ss_dssp             ---------SSHHHHHHHHHHHHCCCCTTCCCCHH
T ss_pred             ---------CcHHHHHHHHHHHcCCCCCCcchHHH
Confidence                     13456689999999999999965433

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.43  E-value=3.6e-14  Score=96.06  Aligned_cols=94  Identities=9%  Similarity=-0.110  Sum_probs=61.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHH-HHHHHhCCCCcCCCC--hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCI-FAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~-l~~l~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+. . +.++||||++++ .++++.|..||....  ......+........                  
T Consensus       239 gt~~y~aPE~~~g~-~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------  298 (336)
T 2vuw_A          239 FCDVSMDEDLFTGD-G-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT------------------  298 (336)
T ss_dssp             CCCCTTCSGGGCCC-S-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS------------------
T ss_pred             EeecccChhhhcCC-C-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCc------------------
Confidence            78999999996544 3 889999998777 667888888884210  001111111101000                  


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh-cCCCcc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL-CIGTSE  124 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l-~~~~~~  124 (142)
                          .........++.++++||.+||.+|     |+++++ +||||+
T Consensus       299 ----~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          299 ----KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             ----CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             ----ccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence                0001122346788999999999987     999999 999985

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.40  E-value=5.4e-13  Score=88.65  Aligned_cols=81  Identities=11%  Similarity=0.045  Sum_probs=56.7

Q ss_pred             CCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCCCchhHhhhcCCCchH
Q 048170           17 VYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEPADLAEKTHGLEPSG   96 (142)
Q Consensus        17 ~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (142)
                      .++.++||||+||++|+|++|+.||.+......              .   .    ...................++.++
T Consensus       178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~--------------~---~----~~~~~~~~~~~~~~~~~~~~~~~l  236 (286)
T 3uqc_A          178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG--------------L---A----PAERDTAGQPIEPADIDRDIPFQI  236 (286)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC--------------S---E----ECCBCTTSCBCCHHHHCTTSCHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh--------------h---H----HHHHHhccCCCChhhcccCCCHHH
Confidence            478899999999999999999999975422100              0   0    000001111223334456688999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhc
Q 048170           97 VELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        97 ~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                      .+||.+||..||++| |+.++++
T Consensus       237 ~~li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          237 SAVAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             HHHHHHHHCTTSSCC-CHHHHHH
T ss_pred             HHHHHHHcccCCccC-CHHHHHH
Confidence            999999999999999 9999874

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=96.64  E-value=1.3e-05  Score=58.07  Aligned_cols=34  Identities=6%  Similarity=-0.361  Sum_probs=13.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSG   37 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g   37 (142)
                      ||+.|++||++.+  .+...+|+||.|++++++..+
T Consensus       401 GTp~YmAPE~l~g--~~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          401 QSFFVFVNELFAE--NKSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             HHHHHHHHHHC-------------------CCCCTT
T ss_pred             echhhccHHHhCC--CCCCcccccccccchhhhccc
Confidence            6889999999543  466789999999988766544

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=81.99  E-value=6.4  Score=25.21  Aligned_cols=28  Identities=18%  Similarity=0.080  Sum_probs=17.2

Q ss_pred             ccchhhhcCCCCCChhhhHHHHHHHHHHHH
Q 048170            6 YKAPESRICSSVYMTPHDVWAVGCIFAEMV   35 (142)
Q Consensus         6 y~~PE~~~~~~~~~~~~Diws~g~~l~~l~   35 (142)
                      +.+||..  ....+.+.-|+|+|+++|.-+
T Consensus       103 ~~~pe~~--~~~~te~~~IysLG~tLY~AL  130 (229)
T 2yle_A          103 PVAGKLG--YSQCMETEVIESLGIIIYKAL  130 (229)
T ss_dssp             ----CCS--SSSSCHHHHHHHHHHHHHHHH
T ss_pred             CCChhhc--cccchHHHHHHHHHHHHHHHh
Confidence            3455542  124467788999999999766

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	142
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-23
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-21
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-19
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-19
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-19
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	6e-19
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-18
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-18
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-18
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	7e-18
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-15
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-15
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-13
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-13
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-12
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-12
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-11
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-11
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-11
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-11
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	6e-11
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-10
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-10
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-10
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-09
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-09
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-09
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	9e-09
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-08
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	8e-08
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	8e-08
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-08
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-07
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-07
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-07
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-06
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-06
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	6e-06
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-05
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-05
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-04
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-04
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-04
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	6e-04
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	7e-04
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	0.001
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	0.001
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	0.001
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	0.001
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	0.002
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	0.002
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	0.002
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	0.002
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	0.003
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	0.004

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.5 bits (221), Expect = 5e-23
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKET 63
            Y+APE  +    Y T  D+W++GCIFAEMV+ + LFP   + D L  I R  G P +  
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WPG   + +   S P+    D ++    L+  G  LLSQML  DP+ R++A  AL
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 85.7 bits (211), Expect = 1e-21
 Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 1/114 (0%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
           Y+AP+  + S  Y T  D+W+VGCIFAEMV+G PLFP   + D L  I R+ G P  + W
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW 225

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P    + +   +    EP        GL+ SG++LLS+ML LDP+ R+TA  AL
Sbjct: 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.6 bits (198), Expect = 1e-19
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 3/116 (2%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKET 63
            Y+APE    ++ Y +  DVW+ GC+ AE++ G+P+FP     D L  I+++ G PT+E 
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246

Query: 64  WPGANYISELLHSLPQCEPADLAEK-THGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               N  +      PQ +     +       P  + L S++L   P  R+T  +A 
Sbjct: 247 IREMNP-NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.5 bits (195), Expect = 2e-19
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 2/114 (1%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETW 64
           Y+APE    + +Y    D+WAVGCI AE++   P  P     D L+ I    G PT+E W
Sbjct: 166 YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQW 225

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           P    + +   +        L           ++L+  +   +P  R+TA  AL
Sbjct: 226 PDMCSLPD-YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 278

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 3e-19
 Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 3/117 (2%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKET 63
            Y+APE  +    Y    D+W+VGCI AE+++G+ LFP     D L LI+RL G P  E 
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 242

Query: 64  WPGANYIS--ELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               +  S    + SL Q    + A    G  P  V+LL +ML LD D R+TA  AL
Sbjct: 243 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (193), Expect = 6e-19
 Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 3/118 (2%)

Query: 4   FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKE 62
             Y+APE  + S  Y    D+W+VGCI AEM+S +P+FP     D L+ I+ + G+P++E
Sbjct: 176 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 235

Query: 63  TWPGANY--ISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                        L SLP              +   ++LL +ML  +P  R+    AL
Sbjct: 236 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 293

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.3 bits (189), Expect = 1e-18
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 2/117 (1%)

Query: 4   FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK-PLFPCGK-KDHLSLIVRLFGNPTK 61
             Y+ P+    + +Y T  D+W+ GCIFAE+ +   PLFP     D L  I RL G PT+
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 224

Query: 62  ETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           E WP    + +            L      L  +G +LL  +L  +P  R++A +AL
Sbjct: 225 EQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 3e-18
 Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 14/136 (10%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETW 64
           Y+APE  +    Y    D+W+VGCI AEM++GK LF      D L  I+++ G P  E  
Sbjct: 184 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 243

Query: 65  PGANYIS--ELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGT 122
                      +  LP+ E  D A       P  V LL +ML LD + RVTA +AL    
Sbjct: 244 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL---- 299

Query: 123 SEKLLAHAHLYVKTVH 138
                  AH Y +++H
Sbjct: 300 -------AHPYFESLH 308

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.1 bits (186), Expect = 5e-18
 Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 4/119 (3%)

Query: 4   FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRLFGNPTKE 62
             Y+ PE  +    Y  P D+W  GCI AEM +  P+     ++  L+LI +L G+ T E
Sbjct: 185 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 244

Query: 63  TWPGAN---YISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
            WP  +      +L     Q        K +  +P  ++L+ ++L LDP  R+ ++DAL
Sbjct: 245 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 303

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.7 bits (185), Expect = 7e-18
 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 3/115 (2%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKET 63
            +      +  S Y TP D+W+VGCIFAEM   KPLF      D L  I+ + G P +E 
Sbjct: 179 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 238

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           WP    +     +        + +    ++  G +LL + L  +P  R++A  AL
Sbjct: 239 WPRDVALPR--QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 291

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 69.1 bits (168), Expect = 2e-15
 Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 10/123 (8%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKET 63
           +K PE  +   +Y    D+W++GC+ A M+  K  F  G    D L  I ++ G      
Sbjct: 195 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 254

Query: 64  WPGANYISEL--------LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
           +     I            HS  + E    +E  H + P  ++ L ++L  D   R+TA 
Sbjct: 255 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 314

Query: 116 DAL 118
           +A+
Sbjct: 315 EAM 317

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 6e-15
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 17/130 (13%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVR------LFGN 58
            Y +PE R+  + Y    D+W++G    EM  G+   P      L L+            
Sbjct: 168 SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAET 226

Query: 59  PTKETWPGANYISELLHSLPQCEPADLAEK----------THGLEPSGVELLSQMLCLDP 108
           P +   PG    S  + S P     +L +           +        + +++ L  +P
Sbjct: 227 PPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNP 286

Query: 109 DHRVTANDAL 118
             R      +
Sbjct: 287 AERADLKQLM 296

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.1 bits (152), Expect = 3e-13
 Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 21/133 (15%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-------CGKKDHLSLIVRLFGN 58
           Y++PE  +  + +    D+W+  C+  E+++G  LF            DH++ I+ L G 
Sbjct: 195 YRSPE-VLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGE 253

Query: 59  PTKETWPGANYISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLC 105
                     Y     +S                    +  + +        + LS ML 
Sbjct: 254 LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQ 313

Query: 106 LDPDHRVTANDAL 118
           LDP  R  A   +
Sbjct: 314 LDPRKRADAGGLV 326

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (151), Expect = 4e-13
 Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 14/128 (10%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRLFGNPTKET 63
            Y      I    Y    D+W+VGCI  EMV  K LFP     D  + ++   G P  E 
Sbjct: 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241

Query: 64  WPGANY-ISELLHSLPQCEPADL------------AEKTHGLEPSGVELLSQMLCLDPDH 110
                  +   + + P+                  +E          +LLS+ML +DP  
Sbjct: 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 301

Query: 111 RVTANDAL 118
           R++ +DAL
Sbjct: 302 RISVDDAL 309

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 60.8 bits (147), Expect = 2e-12
 Identities = 24/138 (17%), Positives = 46/138 (33%), Gaps = 38/138 (27%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKET 63
            + APE  +         D+WA+G +   ++SG   F      + L  + R      ++ 
Sbjct: 193 EFAAPEI-VDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDA 251

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS 123
           +                           + P   + +  +L  +P  R+T +DAL     
Sbjct: 252 FSS-------------------------VSPEAKDFIKNLLQKEPRKRLTVHDAL----- 281

Query: 124 EKLLAHAHLYVKTVHVNI 141
                  H ++K  H N+
Sbjct: 282 ------EHPWLKGDHSNL 293

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 60.5 bits (146), Expect = 2e-12
 Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 27/114 (23%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRLFGNPTKETW 64
           + APE            D+W+VG +   ++SG   F      + L  +     N     +
Sbjct: 191 FAAPE-VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF 249

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                                     G+   G + + ++L  DP+ R+T + AL
Sbjct: 250 S-------------------------GISEDGKDFIRKLLLADPNTRMTIHQAL 278

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 1e-11
 Identities = 17/115 (14%), Positives = 38/115 (33%), Gaps = 26/115 (22%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKET 63
           P           V  T  D+W++G +   ++SG   F     +  +  I+       +E 
Sbjct: 167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEA 226

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           +                           +    ++ + ++L  +   R+TA++AL
Sbjct: 227 FK-------------------------EISIEAMDFVDRLLVKERKSRMTASEAL 256

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 1e-11
 Identities = 20/114 (17%), Positives = 35/114 (30%), Gaps = 25/114 (21%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
           PY APE       +  P DVW+ G +   M++G+  +                      W
Sbjct: 170 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 229

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                                      ++ + + LL ++L  +P  R+T  D  
Sbjct: 230 K-------------------------KIDSAPLALLHKILVENPSARITIPDIK 258

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.0 bits (137), Expect = 4e-11
 Identities = 21/113 (18%), Positives = 37/113 (32%), Gaps = 25/113 (22%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
           Y APE  +    Y    D W++G I   ++ G P F                        
Sbjct: 175 YVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFY----------------------- 210

Query: 66  GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                ++L   + + E    +     +  S  + +  ++  DP+ R T   AL
Sbjct: 211 -DENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL 262

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (136), Expect = 6e-11
 Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 26/114 (22%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
            + APE  +    Y    D+W++G +  EM+ G+P +          ++   G P  +  
Sbjct: 181 YWMAPE-VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 239

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                                      L     + L++ L +D + R +A + L
Sbjct: 240 E-------------------------KLSAIFRDFLNRCLDMDVEKRGSAKELL 268

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 6e-11
 Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 27/116 (23%)

Query: 4   FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKE 62
             + APE  +         D+W++G I   ++SG   F    K++ L+ +  +      E
Sbjct: 180 PEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDE 238

Query: 63  TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
            +                                 + + ++L  DP  R+T  D+L
Sbjct: 239 YFSN-------------------------TSALAKDFIRRLLVKDPKKRMTIQDSL 269

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (131), Expect = 2e-10
 Identities = 23/115 (20%), Positives = 36/115 (31%), Gaps = 29/115 (25%)

Query: 4   FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKET 63
             Y APE  +    Y    D W+ G +  EM+ G+  F                      
Sbjct: 167 PDYIAPE-ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH--------------------- 204

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                   EL HS+    P         LE    +LL ++   +P+ R+     +
Sbjct: 205 ---GQDEEELFHSIRMDNP----FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDI 252

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (129), Expect = 4e-10
 Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 29/114 (25%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
            Y  PE  I   ++    D+W++G +  E + GKP F                N  +ET+
Sbjct: 169 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------------ANTYQETY 213

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                IS +  + P                   +L+S++L  +P  R    + L
Sbjct: 214 ---KRISRVEFTFPDFVTEGAR-----------DLISRLLKHNPSQRPMLREVL 253

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 5e-10
 Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 32/125 (25%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
            Y +PE  +         D+WA+GCI  ++V+G P F  G +  +               
Sbjct: 175 QYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI--------------- 218

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE 124
                I +L +  P+              P   +L+ ++L LD   R+   +        
Sbjct: 219 --FQKIIKLEYDFPE-----------KFFPKARDLVEKLLVLDATKRLGCEEME---GYG 262

Query: 125 KLLAH 129
            L AH
Sbjct: 263 PLKAH 267

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 52.8 bits (126), Expect = 1e-09
 Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 24/101 (23%)

Query: 18  YMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL 77
           Y    D+W+ G I   +++G P F    +  + ++  +     +   P  +  S+ +   
Sbjct: 192 YGKEVDMWSTGVIMYTLLAGSPPFW--HRKQMLMLRMIMSGNYQFGSPEWDDYSDTV--- 246

Query: 78  PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                               +L+S+ L + P  R TA +AL
Sbjct: 247 -------------------KDLVSRFLVVQPQKRYTAEEAL 268

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 1e-09
 Identities = 23/115 (20%), Positives = 40/115 (34%), Gaps = 23/115 (20%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
            Y APE  +    Y    D+W++G I   ++ G P F                N      
Sbjct: 178 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY--------------SNHGLAIS 222

Query: 65  PG-ANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           PG    I    +  P  E ++++            L+  +L  +P  R+T  + +
Sbjct: 223 PGMKTRIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFM 270

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 2e-09
 Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 29/117 (24%)

Query: 6   YKAPESRICSSVYMTPH----DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTK 61
           + APE  +C +    P+    DVW++G    EM   +P                      
Sbjct: 176 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH------------------- 216

Query: 62  ETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                      +L  + + EP  LA+ +     +  + L + L  + D R T +  L
Sbjct: 217 -----ELNPMRVLLKIAKSEPPTLAQPSR-WSSNFKDFLKKCLEKNVDARWTTSQLL 267

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (122), Expect = 4e-09
 Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 28/114 (24%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
            Y +PE  +    Y    D+W++GC+  E+ +  P F                       
Sbjct: 179 YYMSPEQ-MNRMSYNEKSDIWSLGCLLYELCALMPPFT---------------------- 215

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
             A    EL   + + +   +  +         E++++ML L   HR +  + L
Sbjct: 216 --AFSQKELAGKIREGKFRRIPYR---YSDELNEIITRMLNLKDYHRPSVEEIL 264

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 9e-09
 Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 27/113 (23%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
           + APE  +    Y    DV+A G    EM + +  +   +  + + I R   +  K    
Sbjct: 179 FMAPE--MYEEKYDESVDVYAFGMCMLEMATSEYPYS--ECQNAAQIYRRVTSGVKPASF 234

Query: 66  GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
               I E+                        E++   +  + D R +  D L
Sbjct: 235 DKVAIPEV-----------------------KEIIEGCIRQNKDERYSIKDLL 264

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 47.8 bits (113), Expect = 5e-08
 Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 25/114 (21%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
            Y +PE +          DV+++GC+  E+++G+P F                       
Sbjct: 179 QYLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPFT---------------------- 215

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
              +    + +   + +P   + +  GL      ++ + L  +P++R      +
Sbjct: 216 --GDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 267

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 8e-08
 Identities = 18/127 (14%), Positives = 38/127 (29%), Gaps = 30/127 (23%)

Query: 4   FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRLFGNPTKE 62
                   R   S +    D W++G +  E+++G   F   G+K+  + I R        
Sbjct: 195 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP 254

Query: 63  TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGT 122
                                        +     +L+ ++L  DP  R+          
Sbjct: 255 YPQ-------------------------EMSALAKDLIQRLLMKDPKKRLGCGPR----D 285

Query: 123 SEKLLAH 129
           ++++  H
Sbjct: 286 ADEIKEH 292

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 8e-08
 Identities = 18/114 (15%), Positives = 27/114 (23%), Gaps = 34/114 (29%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
            Y  PE       +     VW++G +  +MV G   F                       
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----------------------- 210

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                I        Q   ++              L+   L L P  R T  +  
Sbjct: 211 EHDEEIIRGQVFFRQRVSSECQ-----------HLIRWCLALRPSDRPTFEEIQ 253

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 8e-08
 Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 24/117 (20%)

Query: 4   FPYKAPES--RICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTK 61
             + APE       + Y    DV+A G +  E+++G+  +     ++   I+ + G    
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS--NINNRDQIIFMVGR--- 224

Query: 62  ETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                  Y+S  L  +    P  +             L+++ L    D R      L
Sbjct: 225 ------GYLSPDLSKVRSNCPKAMK-----------RLMAECLKKKRDERPLFPQIL 264

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.9 bits (111), Expect = 1e-07
 Identities = 21/115 (18%), Positives = 34/115 (29%), Gaps = 28/115 (24%)

Query: 6   YKAPESRICSSV--YMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKET 63
           + APE  +      Y    DVW++G    E+   KP       + +S +  +  N +   
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF--NMNAMSALYHIAQNESPAL 234

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
             G  + SE                           +   L   P  R T+   L
Sbjct: 235 QSG--HWSEYFR----------------------NFVDSCLQKIPQDRPTSEVLL 265

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.0 bits (111), Expect = 1e-07
 Identities = 20/125 (16%), Positives = 36/125 (28%), Gaps = 29/125 (23%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
            Y APE       Y +  D +++GC+  +++ G   F   K      I R+      E  
Sbjct: 170 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP 229

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE 124
                                        P    LL  +L  D + R+          ++
Sbjct: 230 D-------------------------SFSPELRSLLEGLLQRDVNRRLGCLG----RGAQ 260

Query: 125 KLLAH 129
           ++   
Sbjct: 261 EVKES 265

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.0 bits (108), Expect = 2e-07
 Identities = 12/114 (10%), Positives = 25/114 (21%), Gaps = 21/114 (18%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
            Y +  +           D+ ++G +      G   +   K                 T 
Sbjct: 178 RYASINT-HLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 236

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                       L +  P++ A             L+    L  D +   +   
Sbjct: 237 I---------EVLCKGYPSEFA-----------TYLNFCRSLRFDDKPDYSYLR 270

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 1e-06
 Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 11/118 (9%)

Query: 6   YKAPESRICSSVYMTPH-----DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPT 60
           Y APE    S            D++A+G +F E+     +    +   L     +  +P+
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237

Query: 61  KETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
            E         +L  ++P    +  A +         +++ +    +   R+TA    
Sbjct: 238 VEEMRKVVCEQKLRPNIPNRWQSCEALR------VMAKIMRECWYANGAARLTALRIK 289

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 2e-06
 Identities = 22/125 (17%), Positives = 39/125 (31%), Gaps = 32/125 (25%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
           P       +  + Y    D W +G +  EM+ G+  F     +      RLF     E  
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------RLFELILMEEI 222

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE 124
                +S                      P    LL+ +L  DP  R+    +     ++
Sbjct: 223 RFPRTLS----------------------PEAKSLLAGLLKKDPKQRLGGGPS----DAK 256

Query: 125 KLLAH 129
           +++ H
Sbjct: 257 EVMEH 261

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 42.1 bits (98), Expect = 6e-06
 Identities = 15/107 (14%), Positives = 26/107 (24%), Gaps = 21/107 (19%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
            Y +              D+ A+G +F   + G   +   K           G   K++ 
Sbjct: 178 RYMSIN-THLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE-KKQST 235

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHR 111
           P        L  L    P +             + +     L  D  
Sbjct: 236 P--------LRELCAGFPEEFY-----------KYMHYARNLAFDAT 263

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.2 bits (96), Expect = 1e-05
 Identities = 20/124 (16%), Positives = 36/124 (29%), Gaps = 33/124 (26%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
           Y APE  + +  Y    D W+ G +  EM++G   F                        
Sbjct: 167 YIAPEV-VSTKPYNKSIDWWSFGILIYEMLAGYTPFY----------------------- 202

Query: 66  GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK 125
             +   +    +   E                +LLS+++  D   R+          +E 
Sbjct: 203 -DSNTMKTYEKILNAEL----RFPPFFNEDVKDLLSRLITRDLSQRLGNLQN----GTED 253

Query: 126 LLAH 129
           +  H
Sbjct: 254 VKNH 257

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 5e-05
 Identities = 17/113 (15%), Positives = 35/113 (30%), Gaps = 27/113 (23%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
           + APE+ +    + T  DVW+ G +  E+ S   +                         
Sbjct: 166 WTAPEA-LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----------------- 207

Query: 66  GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                 +++  + +    D  +   G  P+  E++     LD   R +     
Sbjct: 208 ------DVVPRVEKGYKMDAPD---GCPPAVYEVMKNCWHLDAAMRPSFLQLR 251

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 1e-04
 Identities = 19/115 (16%), Positives = 34/115 (29%), Gaps = 31/115 (26%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH--LSLIVRLFGNPTKET 63
           + APE+      +    DVW+ G +  E+ +   +   G  +   L  + R +  P    
Sbjct: 180 WTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 238

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
            P                             S  +L+ Q    +P+ R T     
Sbjct: 239 CP----------------------------ESLHDLMCQCWRKEPEERPTFEYLQ 265

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 2e-04
 Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 31/117 (26%)

Query: 4   FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH--LSLIVRLFGNPTK 61
             + APE  I    + +  DVW+ G +  E+++          +H  +  I   F  PT 
Sbjct: 177 IRWTAPE-AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP 235

Query: 62  ETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
              P                             +  +L+ Q    +   R    D +
Sbjct: 236 MDCP----------------------------SAIYQLMMQCWQQERARRPKFADIV 264

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 6e-04
 Identities = 17/115 (14%), Positives = 37/115 (32%), Gaps = 27/115 (23%)

Query: 4   FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKET 63
             + A ES + +  + T  DVW+ G +  E+++     P    +   + V L        
Sbjct: 198 VKWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITVYLLQGRRLL- 254

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                         P+  P  L            E++ +      + R + ++ +
Sbjct: 255 -------------QPEYCPDPLY-----------EVMLKCWHPKAEMRPSFSELV 285

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 6e-04
 Identities = 16/113 (14%), Positives = 34/113 (30%), Gaps = 27/113 (23%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
           + +PE     S Y +  DVW+ G +  E+ S                    G    E   
Sbjct: 168 WASPEV-FSFSRYSSKSDVWSFGVLMWEVFSE-------------------GKIPYENRS 207

Query: 66  GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
            +  + ++       +P   +           ++++      P+ R   +  L
Sbjct: 208 NSEVVEDISTGFRLYKPRLASTHV-------YQIMNHCWKERPEDRPAFSRLL 253

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 7e-04
 Identities = 30/133 (22%), Positives = 44/133 (33%), Gaps = 29/133 (21%)

Query: 4   FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKET 63
             + A ES +  SVY T  DVW+ G +  E+VS      CG                   
Sbjct: 190 VRWMAIES-LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT----------------- 231

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS 123
                  +EL   LPQ    +        +    +L+ Q     P  R +    L   + 
Sbjct: 232 ------CAELYEKLPQGYRLEKPLN---CDDEVYDLMRQCWREKPYERPSFAQILV--SL 280

Query: 124 EKLLAHAHLYVKT 136
            ++L     YV T
Sbjct: 281 NRMLEERKTYVNT 293

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 0.001
 Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 29/116 (25%)

Query: 4   FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKE 62
             + A ES I   +Y    DVW+ G    E+++ G   +       +S I+         
Sbjct: 177 IKWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-------- 227

Query: 63  TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                          P     D+             ++ +   +D D R    + +
Sbjct: 228 --------KGERLPQPPICTIDVYM-----------IMVKCWMIDADSRPKFRELI 264

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 0.001
 Identities = 17/114 (14%), Positives = 35/114 (30%), Gaps = 29/114 (25%)

Query: 4   FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKE 62
             + APE  I    + +  DVW+ G +  E  S G+  +   K   ++ ++         
Sbjct: 174 VKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-------- 224

Query: 63  TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAND 116
                          P   P ++            +L++     D ++R     
Sbjct: 225 --------KGERMGCPAGCPREMY-----------DLMNLCWTYDVENRPGFAA 259

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.2 bits (80), Expect = 0.001
 Identities = 21/114 (18%), Positives = 32/114 (28%), Gaps = 26/114 (22%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
               P   I  + Y T  DVWA G +  E+ S   L P     H  +I  +         
Sbjct: 206 IRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG-LQPYYGMAHEEVIYYV--------- 255

Query: 65  PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                    + + P+  P +L             L+       P  R +     
Sbjct: 256 -----RDGNILACPENCPLELY-----------NLMRLCWSKLPADRPSFCSIH 293

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (80), Expect = 0.001
 Identities = 17/113 (15%), Positives = 36/113 (31%), Gaps = 27/113 (23%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
           + +PES +   V+ T  DVW+ G +  E+ +       G  +                  
Sbjct: 201 WMSPES-LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----------------- 242

Query: 66  GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                 ++L  + +    D  +          EL+      +P  R +  + +
Sbjct: 243 ------QVLRFVMEGGLLDKPDN---CPDMLFELMRMCWQYNPKMRPSFLEII 286

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 0.002
 Identities = 14/115 (12%), Positives = 29/115 (25%), Gaps = 28/115 (24%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKET 63
                   +   +Y    DVW+ G +  E+ + G   +P    + L  +++         
Sbjct: 201 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK--------- 251

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
                         P     +L             ++       P  R T    +
Sbjct: 252 -------EGHRMDKPSNCTNELY-----------MMMRDCWHAVPSQRPTFKQLV 288

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.002
 Identities = 11/115 (9%), Positives = 26/115 (22%), Gaps = 27/115 (23%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKET 63
                   + +  +    D W  G    EM + G+  +     +   ++ ++     +  
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG--LNGSQILHKIDKEGERLP 235

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
            P                                 ++ Q     P+ R T     
Sbjct: 236 RP------------------------EDCPQDIYNVMVQCWAHKPEDRPTFVALR 266

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 0.002
 Identities = 20/116 (17%), Positives = 36/116 (31%), Gaps = 28/116 (24%)

Query: 4   FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKE 62
             + APE  +   +Y    DVW+ G +  E+ S G   +P       +   +L  N  K 
Sbjct: 230 VKWMAPE-SLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP--GIPVDANFYKLIQNGFKM 286

Query: 63  TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
             P   Y +E ++                       ++      D   R +  +  
Sbjct: 287 DQP--FYATEEIY----------------------IIMQSCWAFDSRKRPSFPNLT 318

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.8 bits (79), Expect = 0.002
 Identities = 22/124 (17%), Positives = 34/124 (27%), Gaps = 33/124 (26%)

Query: 6   YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
             APE  I S  Y    D WA+G +  EM +G P F                        
Sbjct: 204 ALAPE-IILSKGYNKAVDWWALGVLIYEMAAGYPPFF----------------------- 239

Query: 66  GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK 125
            A+   ++   +   +                +LL  +L +D   R              
Sbjct: 240 -ADQPIQIYEKIVSGKV----RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKN----GVND 290

Query: 126 LLAH 129
           +  H
Sbjct: 291 IKNH 294

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.003
 Identities = 19/115 (16%), Positives = 33/115 (28%), Gaps = 27/115 (23%)

Query: 4   FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKET 63
             +  PE  +  S + +  D+WA G +  E+ S                    G    E 
Sbjct: 165 VRWSPPE-VLMYSKFSSKSDIWAFGVLMWEIYS-------------------LGKMPYER 204

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
           +  +     +   L    P   +EK +        ++        D R T    L
Sbjct: 205 FTNSETAEHIAQGLRLYRPHLASEKVY-------TIMYSCWHEKADERPTFKILL 252

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (77), Expect = 0.004
 Identities = 16/115 (13%), Positives = 28/115 (24%), Gaps = 28/115 (24%)

Query: 5   PYKAPESRICSSVYMTPHDVWAVGCIFAEM-VSGKPLFPCGKKDHLSLIVRLFGNPTKET 63
                   I    + +  DVW  G    E+ + G    P     +  +I R+        
Sbjct: 173 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK--PFQGVKNNDVIGRIENGERLPM 230

Query: 64  WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
            P                            P+   L+++    DP  R    +  
Sbjct: 231 PP-------------------------NCPPTLYSLMTKCWAYDPSRRPRFTELK 260

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	142
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.96
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.96
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.95
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.95
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.94
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.94
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.94
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.94
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.93
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.93
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.93
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.93
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.93
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.93
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.93
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.93
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.93
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.93
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.93
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.92
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.92
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.92
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.92
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.92
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.92
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.92
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.92
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.92
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.91
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.91
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.91
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.9
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.9
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.89
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.88
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.87
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.86
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.85
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.85
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.85
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.85
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.84
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.84
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.84
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.84
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.83
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.83
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.83
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.83
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.82
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.82
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.81
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.8
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.8
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.8
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.79
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.79
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.78
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.72
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.72

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.7e-29  Score=166.97  Aligned_cols=123  Identities=33%  Similarity=0.579  Sum_probs=96.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+ ..|+.++||||+||++|+|++|+.||.+. ....+..+....+.+....++........  .+...
T Consensus       177 gT~~Y~APE~~~~-~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~  253 (305)
T d1blxa_         177 VTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQ--AFHSK  253 (305)
T ss_dssp             CCCTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGG--GSCCC
T ss_pred             cChhhcCcchhcC-CCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhh--hhccc
Confidence            7999999999654 58999999999999999999999999877 44566777787777666555433222222  22233


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ............+.++++||.+||.+||++|||++|+++||||+++.
T Consensus       254 ~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         254 SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE  300 (305)
T ss_dssp             CCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             cccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCch
Confidence            33444556677899999999999999999999999999999999874

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.4e-29  Score=165.54  Aligned_cols=126  Identities=27%  Similarity=0.455  Sum_probs=100.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.....++.++||||+||++|+|++|.+||.+. ..+.+..+.+..+.+....++........ ..+...
T Consensus       162 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~  240 (299)
T d1ua2a_         162 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY-VTFKSF  240 (299)
T ss_dssp             CCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTC-CCCCCC
T ss_pred             cChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchh-hhhccC
Confidence            7899999999777778999999999999999999999999877 45667778888887777665543322211 223334


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLA  128 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~  128 (142)
                      ...+.....+..+.++++||.+||+.||++||||+|+++||||++...
T Consensus       241 ~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~  288 (299)
T d1ua2a_         241 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG  288 (299)
T ss_dssp             CCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred             CCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCC
Confidence            445566677788999999999999999999999999999999997643

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.1e-28  Score=162.27  Aligned_cols=128  Identities=36%  Similarity=0.641  Sum_probs=108.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.....++.++|+||+||++|+|++|+.||.+. ....+..+....+.+....++...........++..
T Consensus       164 gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (298)
T d1gz8a_         164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW  243 (298)
T ss_dssp             CCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCC
T ss_pred             ccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccc
Confidence            7899999999776666789999999999999999999999877 445677788888887777776666666666666666


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ...........++.++++||.+||.+||++|||++|+++||||+++.++
T Consensus       244 ~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP  292 (298)
T ss_dssp             CCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             cccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCC
Confidence            6677777778899999999999999999999999999999999988544

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.95  E-value=4.1e-28  Score=159.94  Aligned_cols=124  Identities=40%  Similarity=0.718  Sum_probs=106.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|++||.+.+...++.++|+||+||++|+|++|+.||.+. ..+....+....+.+....++...............
T Consensus       162 ~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T d1ob3a_         162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY  241 (286)
T ss_dssp             CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC
T ss_pred             ccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccc
Confidence            6788999999877778899999999999999999999999877 445667778888888877777666666666666666


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                      ............+.++++||.+||.+||++|||++|+++||||++
T Consensus       242 ~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             CCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             cCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence            667777777889999999999999999999999999999999974

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-27  Score=155.64  Aligned_cols=95  Identities=18%  Similarity=0.222  Sum_probs=76.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.........+.......                     
T Consensus       166 Gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~---------------------  223 (263)
T d2j4za1         166 GTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF---------------------  223 (263)
T ss_dssp             EEGGGCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCC---------------------
T ss_pred             CCCcccCHHHHcC-CCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC---------------------
Confidence            7999999999654 578999999999999999999999998775544433332111100                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                             ...++.++++||.+||..||++|||++|+++||||..
T Consensus       224 -------p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         224 -------PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             -------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             -------CccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence                   1237889999999999999999999999999999974

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.1e-27  Score=154.58  Aligned_cols=99  Identities=20%  Similarity=0.226  Sum_probs=75.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|||||++.+...++.++||||+||++|+|++|+.||..... ............ ..                   
T Consensus       167 GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~-~~-------------------  226 (271)
T d1nvra_         167 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-YL-------------------  226 (271)
T ss_dssp             SCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCT-TS-------------------
T ss_pred             eCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-CC-------------------
Confidence            799999999976664567889999999999999999999976522 222222211110 00                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                            .....++.++++||.+||..||++|||++|+++||||++-
T Consensus       227 ------~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  266 (271)
T d1nvra_         227 ------NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  266 (271)
T ss_dssp             ------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             ------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence                  0113478899999999999999999999999999999853

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.4e-27  Score=159.22  Aligned_cols=129  Identities=36%  Similarity=0.537  Sum_probs=101.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCc--cchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGA--NYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|.+||.+. ....+..+....+.++.......  .........++
T Consensus       180 ~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (346)
T d1cm8a_         180 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLP  259 (346)
T ss_dssp             SCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSC
T ss_pred             ccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCC
Confidence            7899999999887778899999999999999999999999877 34455666666666554433222  22344456666


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhcc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHA  130 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~  130 (142)
                      ......+.......+.++++||.+||..||++|||++|+++||||+.+.+..
T Consensus       260 ~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~~  311 (346)
T d1cm8a_         260 ELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTE  311 (346)
T ss_dssp             CCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC---
T ss_pred             cccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCcc
Confidence            6667777777788999999999999999999999999999999999875443

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.6e-26  Score=154.34  Aligned_cols=125  Identities=28%  Similarity=0.502  Sum_probs=89.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHh-hcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELL-HSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   79 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|+.||.+. .......+....+.+............... .....
T Consensus       183 gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (318)
T d3blha1         183 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVK  262 (318)
T ss_dssp             SCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCS
T ss_pred             cCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccc
Confidence            7899999999877778999999999999999999999999877 444556666777766655544332222211 11111


Q ss_pred             CCCchhHhhh--cCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           80 CEPADLAEKT--HGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        80 ~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                      .........+  ...+.++++||.+||.+||++|+|++|+++||||+..
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         263 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             SCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred             cccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence            1111221111  2357788999999999999999999999999999853

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.3e-26  Score=151.63  Aligned_cols=95  Identities=19%  Similarity=0.131  Sum_probs=73.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++. . .++.++||||+||++|+|++|+.||... ....+...+..... +                    
T Consensus       175 GT~~Y~aPE~~~-~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~-~--------------------  231 (270)
T d1t4ha_         175 GTPEFMAPEMYE-E-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK-P--------------------  231 (270)
T ss_dssp             SSCCCCCGGGGG-T-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC-C--------------------
T ss_pred             cCccccCHHHhC-C-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCC-C--------------------
Confidence            799999999853 3 6999999999999999999999999755 33333322221100 0                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCcc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSE  124 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~  124 (142)
                           .......++++++||.+||..||++|||++|+++||||+
T Consensus       232 -----~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         232 -----ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             -----GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             -----cccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence                 111244778899999999999999999999999999995

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.2e-26  Score=152.01  Aligned_cols=98  Identities=23%  Similarity=0.306  Sum_probs=76.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH-HHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+ ..++.++||||+||++|+|++|..||.+..... ...+.. .+.+....                 
T Consensus       178 gt~~Y~aPE~~~~-~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~-~~~~~~~~-----------------  238 (293)
T d1yhwa1         178 GTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPELQN-----------------  238 (293)
T ss_dssp             SCGGGCCHHHHSS-SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-HCSCCCSS-----------------
T ss_pred             cCCCccChhhhcC-CCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHh-CCCCCCCC-----------------
Confidence            7999999999654 588999999999999999999999998664433 333322 22111111                 


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                              ...++.++++||.+||..||++|||++|+++||||+..
T Consensus       239 --------~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~  276 (293)
T d1yhwa1         239 --------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA  276 (293)
T ss_dssp             --------GGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             --------cccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence                    12378899999999999999999999999999999743

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=2.3e-26  Score=152.86  Aligned_cols=99  Identities=20%  Similarity=0.222  Sum_probs=75.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+ ..++.++||||+||++|+|++|..||.+.........+........                    
T Consensus       171 GT~~y~APE~~~~-~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~--------------------  229 (307)
T d1a06a_         171 GTPGYVAPEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD--------------------  229 (307)
T ss_dssp             --CTTSCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCC--------------------
T ss_pred             eCccccCcHHHcC-CCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCC--------------------
Confidence            7999999999654 4899999999999999999999999987654443332221111100                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                          ......++.++++||.+||..||++|||++|+++||||..
T Consensus       230 ----~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  269 (307)
T d1a06a_         230 ----SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG  269 (307)
T ss_dssp             ----TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTS
T ss_pred             ----CccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence                0112347889999999999999999999999999999975

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.4e-26  Score=149.52  Aligned_cols=94  Identities=21%  Similarity=0.254  Sum_probs=75.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|+.||.+.+...+...+.......                     
T Consensus       176 gt~~Y~APE~l~-~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~---------------------  233 (269)
T d2java1         176 GTPYYMSPEQMN-RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---------------------  233 (269)
T ss_dssp             CCCSCCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC---------------------
T ss_pred             CCcccCCHHHHc-CCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC---------------------
Confidence            789999999954 4589999999999999999999999998765554433332211110                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTS  123 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~  123 (142)
                            ....++.++++||.+||..||++|||++|+++|||+
T Consensus       234 ------~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         234 ------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             ------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             ------CCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence                  012378899999999999999999999999999995

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.8e-27  Score=156.71  Aligned_cols=125  Identities=21%  Similarity=0.310  Sum_probs=77.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHH--HHHhCCCCCCCC----CC---------
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI--VRLFGNPTKETW----PG---------   66 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~---------   66 (142)
                      ||+.|||||++.+. .|+.++||||+||++|||++|+.||.+.+.......  ....+.......    ..         
T Consensus       165 GT~~Y~APEvl~~~-~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (322)
T d1s9ja_         165 GTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMD  243 (322)
T ss_dssp             CSSCCCCHHHHHCS-CCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------------
T ss_pred             CCccccCchHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccc
Confidence            89999999997654 899999999999999999999999987643322111  111111100000    00         


Q ss_pred             ---ccchHHHhhcCCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           67 ---ANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        67 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                         .....+....+........  .....+.++++||.+||..||++|||++|+++||||++....
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~~~  307 (322)
T d1s9ja_         244 SRPPMAIFELLDYIVNEPPPKL--PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE  307 (322)
T ss_dssp             --CCCCHHHHHHHHHTSCCCCC--CBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHHHS
T ss_pred             cccchhHHHHHhhhhccCCccC--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCCcc
Confidence               0000000000000000000  001257889999999999999999999999999999876443

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=3e-26  Score=155.42  Aligned_cols=100  Identities=22%  Similarity=0.258  Sum_probs=78.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.....++.++||||+||++|+|++|+.||.+........+...........                  
T Consensus       167 GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~------------------  228 (364)
T d1omwa3         167 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL------------------  228 (364)
T ss_dssp             SCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCC------------------
T ss_pred             cccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCC------------------
Confidence            89999999997666689999999999999999999999997663333223332221111111                  


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~  126 (142)
                             ...++.++++||.+||..||++|+|     |+++++||||+++
T Consensus       229 -------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         229 -------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             -------CSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred             -------CCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence                   1347889999999999999999999     7999999999875

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.4e-26  Score=156.36  Aligned_cols=127  Identities=28%  Similarity=0.459  Sum_probs=91.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||.+.+...++.++||||+||++|||++|..||... ....+..+.+.++.+....+..... ......++..
T Consensus       184 gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~  262 (350)
T d1q5ka_         184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP-NYTEFKFPQI  262 (350)
T ss_dssp             SCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC----CCCCCCC
T ss_pred             ccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhcc-chhhcccccc
Confidence            6889999999887778999999999999999999999999877 4456666777666544332110000 0001111222


Q ss_pred             CCchhH-hhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           81 EPADLA-EKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        81 ~~~~~~-~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                      ....+. ......+.++.+||.+||.+||++|||+.|+++||||+++.+.
T Consensus       263 ~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~  312 (350)
T d1q5ka_         263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDP  312 (350)
T ss_dssp             CCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCT
T ss_pred             ccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccCC
Confidence            222222 2234578899999999999999999999999999999987554

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.9e-26  Score=150.04  Aligned_cols=98  Identities=22%  Similarity=0.217  Sum_probs=75.6

Q ss_pred             ccCcccchhhhcC----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRIC----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      ||+.|+|||++..    ...|+.++||||+||++|+|++|..||.+... .....+.. ...+...              
T Consensus       172 Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~-~~~~~~~--------------  236 (288)
T d2jfla1         172 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK-SEPPTLA--------------  236 (288)
T ss_dssp             SCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHH-SCCCCCS--------------
T ss_pred             cccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHc-CCCCCCC--------------
Confidence            7999999999642    34688999999999999999999999987643 33333322 1111000              


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccc
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK  125 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~  125 (142)
                                 ....++.++++||.+||+.||++|||++|+++||||..
T Consensus       237 -----------~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         237 -----------QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             -----------SGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred             -----------ccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence                       01337889999999999999999999999999999974

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2e-26  Score=151.90  Aligned_cols=96  Identities=22%  Similarity=0.362  Sum_probs=75.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+ ..++.++||||+||++|+|++|..||.+.+.......+.....   .                   
T Consensus       172 GT~~Y~APE~~~~-~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~---~-------------------  228 (288)
T d1uu3a_         172 GTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY---D-------------------  228 (288)
T ss_dssp             CCGGGCCHHHHHT-CCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC---C-------------------
T ss_pred             CCccccCceeecc-CCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCC---C-------------------
Confidence            7999999999654 4899999999999999999999999987755443332221110   0                   


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHH------HhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAND------ALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~------~l~~~~~~~~  126 (142)
                            ....++.++++||.+||..||++|||++|      +++||||+++
T Consensus       229 ------~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i  273 (288)
T d1uu3a_         229 ------FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  273 (288)
T ss_dssp             ------CCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             ------CCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence                  01237889999999999999999999987      5889999876

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.4e-26  Score=149.98  Aligned_cols=126  Identities=29%  Similarity=0.499  Sum_probs=93.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-Ch-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ++..|+|||++.+...++.++||||+||++|+|++|+.||... +. .....+....+.+....++..............
T Consensus       163 ~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (292)
T d1unla_         163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY  242 (292)
T ss_dssp             SCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCC
T ss_pred             cccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccc
Confidence            5688999999777767899999999999999999999886544 33 445556666666666555544333333222222


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      .............+.++++||.+||++||++||||+|+++||||++..
T Consensus       243 ~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~  290 (292)
T d1unla_         243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             CTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred             cccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence            223334445566888999999999999999999999999999998764

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.9e-25  Score=150.52  Aligned_cols=130  Identities=29%  Similarity=0.507  Sum_probs=99.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCC--ccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPG--ANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.....++.++||||+||++++|++|..||.+... ............+.......  ...........+
T Consensus       174 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (345)
T d1pmea_         174 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP  253 (345)
T ss_dssp             SCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSC
T ss_pred             ccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCC
Confidence            688999999976676889999999999999999999999987743 34444455444443332111  122334455566


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAH  131 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~  131 (142)
                      .....++...+...+.++++|+.+||..||.+|||++++++||||+.......
T Consensus       254 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~~~~  306 (345)
T d1pmea_         254 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD  306 (345)
T ss_dssp             CCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred             ccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCCCcc
Confidence            66677777888889999999999999999999999999999999997655443

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.93  E-value=5e-26  Score=153.56  Aligned_cols=101  Identities=21%  Similarity=0.214  Sum_probs=78.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|||||++.+ ..++.++||||+||++|+|++|..||.+.........+........                    
T Consensus       187 gT~~Y~aPEv~~~-~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~--------------------  245 (350)
T d1koaa2         187 GTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD--------------------  245 (350)
T ss_dssp             SCTTTCCHHHHHT-CCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSC--------------------
T ss_pred             CcccccCHHHHcC-CCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--------------------
Confidence            7999999999654 4889999999999999999999999987654433222222111000                    


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                          ......++.++++||.+||..||++|||++|+++||||....
T Consensus       246 ----~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~  287 (350)
T d1koaa2         246 ----DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN  287 (350)
T ss_dssp             ----CGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred             ----cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence                011234788999999999999999999999999999998654

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.1e-25  Score=151.76  Aligned_cols=130  Identities=35%  Similarity=0.552  Sum_probs=100.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCC--ccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPG--ANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   78 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|..||.+.+. .....+....+.+.......  ......+.....
T Consensus       180 g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (348)
T d2gfsa1         180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT  259 (348)
T ss_dssp             HHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSC
T ss_pred             ccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcc
Confidence            678899999977776789999999999999999999999987744 44455555555544332221  222333445566


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhccc
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAH  131 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~~~  131 (142)
                      ......+.......+.++++||.+||..||++|+|++|+++||||++..+...
T Consensus       260 ~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~~  312 (348)
T d2gfsa1         260 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDD  312 (348)
T ss_dssp             CCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTS
T ss_pred             cCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCcc
Confidence            66666777777889999999999999999999999999999999997765443

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=9.4e-26  Score=149.07  Aligned_cols=103  Identities=19%  Similarity=0.169  Sum_probs=77.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|+.||.+.........+.....                       
T Consensus       178 ~t~~y~APE~~~-~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~-----------------------  233 (293)
T d1jksa_         178 GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-----------------------  233 (293)
T ss_dssp             CCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC-----------------------
T ss_pred             CCCcccCHHHHc-CCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC-----------------------
Confidence            788999999965 45899999999999999999999999987654433222221110                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                       ..........+.++++||.+||..||++|||++++++||||+.....
T Consensus       234 -~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~  280 (293)
T d1jksa_         234 -EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ  280 (293)
T ss_dssp             -CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC----
T ss_pred             -CCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCChh
Confidence             01122335588899999999999999999999999999999875433

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=6.8e-26  Score=150.64  Aligned_cols=99  Identities=19%  Similarity=0.138  Sum_probs=76.0

Q ss_pred             CccCcccchhhhcC--CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH-HHHHHHHhCCCCCCCCCCccchHHHhhcC
Q 048170            1 EVEFPYKAPESRIC--SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETWPGANYISELLHSL   77 (142)
Q Consensus         1 ~~t~~y~~PE~~~~--~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (142)
                      .||+.|||||++.+  ...|+.++||||+||++|+|++|..||.+..... +..+.. ...+...               
T Consensus       172 ~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~-~~~~~~~---------------  235 (309)
T d1u5ra_         172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPALQ---------------  235 (309)
T ss_dssp             CSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCS---------------
T ss_pred             ccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh-CCCCCCC---------------
Confidence            38999999999754  3468999999999999999999999997664433 233222 1111111               


Q ss_pred             CCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                                 ...++.++++||.+||..||++|||++++++||||...
T Consensus       236 -----------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~  273 (309)
T d1u5ra_         236 -----------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (309)
T ss_dssp             -----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             -----------CCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCC
Confidence                       02368899999999999999999999999999999753

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.2e-25  Score=149.67  Aligned_cols=96  Identities=23%  Similarity=0.300  Sum_probs=77.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. ...|+.++|+||+||++|+|++|++||.+.+...+...+.......                     
T Consensus       167 GT~~Y~aPE~~~-~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~---------------------  224 (337)
T d1o6la_         167 GTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF---------------------  224 (337)
T ss_dssp             ECGGGCCGGGGS-SSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC---------------------
T ss_pred             eCHHHhhhhhcc-CCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCC---------------------
Confidence            789999999955 4589999999999999999999999998776655444333211111                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCC-----HHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVT-----ANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t-----~~~~l~~~~~~~~  126 (142)
                             ...++.++++||.+||++||.+|++     ++++++||||.++
T Consensus       225 -------p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         225 -------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             -------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             -------CccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence                   1237889999999999999999994     8999999999864

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8.1e-26  Score=150.94  Aligned_cols=96  Identities=22%  Similarity=0.307  Sum_probs=77.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.....+...+.......                     
T Consensus       165 gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~---------------------  222 (320)
T d1xjda_         165 GTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY---------------------  222 (320)
T ss_dssp             SCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC---------------------
T ss_pred             CCCCcCCHHHHcC-CCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC---------------------
Confidence            7899999999654 489999999999999999999999998776655444333211100                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHH-HHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN-DALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~-~~l~~~~~~~~  126 (142)
                             .+.++.++++||.+||..||++||++. ++++||||+++
T Consensus       223 -------p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~  261 (320)
T d1xjda_         223 -------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI  261 (320)
T ss_dssp             -------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             -------CccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence                   123788999999999999999999995 89999999875

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=2.2e-25  Score=150.42  Aligned_cols=96  Identities=21%  Similarity=0.165  Sum_probs=76.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|||||++.+ ..++.++||||+||++|+|++|..||.+.+.......+.......                     
T Consensus       200 Gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~---------------------  257 (350)
T d1rdqe_         200 GTPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF---------------------  257 (350)
T ss_dssp             ECGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC---------------------
T ss_pred             CccccCCHHHHcC-CCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCC---------------------
Confidence            7999999999654 589999999999999999999999998775544333222211111                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                             ...++.++.+||.+||..||.+|+     |++++++||||+.+
T Consensus       258 -------p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         258 -------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             -------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             -------CccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence                   123788999999999999999995     89999999999864

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=3.2e-25  Score=147.83  Aligned_cols=96  Identities=19%  Similarity=0.152  Sum_probs=76.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. +..++.++||||+||++|+|++|+.||.+.+.......+.......                     
T Consensus       163 Gt~~Y~APE~l~-~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~---------------------  220 (316)
T d1fota_         163 GTPDYIAPEVVS-TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF---------------------  220 (316)
T ss_dssp             SCTTTCCHHHHT-TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCC---------------------
T ss_pred             CcccccCHHHHc-CCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCC---------------------
Confidence            899999999954 4489999999999999999999999998775544433222111100                     


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~  126 (142)
                             ...++.++++++.+||..||.+|+     |++++++||||+++
T Consensus       221 -------p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         221 -------PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             -------CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             -------CCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence                   123788999999999999999996     89999999999875

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.92  E-value=6.5e-25  Score=148.19  Aligned_cols=101  Identities=20%  Similarity=0.205  Sum_probs=78.2

Q ss_pred             CccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            1 EVEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         1 ~~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      .||+.|+|||++. ...++.++||||+||++|+|++|..||.+.........+.......+.                  
T Consensus       189 ~gt~~y~aPE~~~-~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~------------------  249 (352)
T d1koba_         189 TATAEFAAPEIVD-REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE------------------  249 (352)
T ss_dssp             CSSGGGCCHHHHT-TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCS------------------
T ss_pred             cCcccccCHHHHc-CCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc------------------
Confidence            3789999999954 458999999999999999999999999877544433222222111111                  


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                            ..+..++.++++||.+||..||.+|||++|+++||||+..
T Consensus       250 ------~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         250 ------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             ------STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             ------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence                  1123478899999999999999999999999999999854

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.1e-25  Score=146.04  Aligned_cols=92  Identities=21%  Similarity=0.209  Sum_probs=73.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++.+...++.++||||+||++|+|++|+.||...+     .+... ..                       
T Consensus       171 GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-----~i~~~-~~-----------------------  221 (273)
T d1xwsa_         171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRG-QV-----------------------  221 (273)
T ss_dssp             SCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HHHHC-CC-----------------------
T ss_pred             cCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-----HHhhc-cc-----------------------
Confidence            89999999997766566788999999999999999999996321     11110 00                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                           .....++.++++||.+||..||++|||++|+++||||+++.
T Consensus       222 -----~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         222 -----FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             -----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             -----CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence                 00123788999999999999999999999999999998764

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.6e-25  Score=148.41  Aligned_cols=125  Identities=28%  Similarity=0.456  Sum_probs=86.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCcc-chHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETWPGAN-YISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   79 (142)
                      +|+.|+|||++.+ ..++.++||||+||++++|++|++||.+.+. .....+......+....+.... ....+......
T Consensus       180 ~t~~y~aPE~l~~-~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (355)
T d2b1pa1         180 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK  258 (355)
T ss_dssp             -CCTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCC
T ss_pred             ccccccChhhhcC-CCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcc
Confidence            6899999999665 4899999999999999999999999987744 4445566655554444332221 12222222222


Q ss_pred             CCCchhHh------------hhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           80 CEPADLAE------------KTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~------------~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ........            .....+.++++||++||.+||++||||+|+|+||||+...
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~  318 (355)
T d2b1pa1         259 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY  318 (355)
T ss_dssp             CCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             ccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            21111111            1122466789999999999999999999999999998644

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.91  E-value=7e-25  Score=146.83  Aligned_cols=126  Identities=22%  Similarity=0.353  Sum_probs=83.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC--hhHHHHHHHHhCCCCCCCC---CCccchHHHhhc
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK--KDHLSLIVRLFGNPTKETW---PGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   76 (142)
                      +|+.|+|||.+.+...++.++|+||+||++++|++|..||....  ......+...++.+....+   ........+...
T Consensus       191 ~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  270 (328)
T d3bqca1         191 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI  270 (328)
T ss_dssp             SCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGT
T ss_pred             cCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchh
Confidence            68899999998777779999999999999999999999997652  2333334443332110000   000001111111


Q ss_pred             CCCCCCchhH-----hhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchh
Q 048170           77 LPQCEPADLA-----EKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLL  127 (142)
Q Consensus        77 ~~~~~~~~~~-----~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~  127 (142)
                      ..........     .....++.++++||.+||.+||++|+|++|+|+||||+.+.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         271 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             CCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSC
T ss_pred             cccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            2211111111     12234788999999999999999999999999999999864

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.4e-25  Score=148.75  Aligned_cols=103  Identities=17%  Similarity=0.144  Sum_probs=74.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhH-HHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++ ....|+.++||||+||++|+|++|+.||.+..... ...+......                     .
T Consensus       175 gt~~y~aPE~~-~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~---------------------~  232 (335)
T d2ozaa1         175 YTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM---------------------G  232 (335)
T ss_dssp             CCCSSCCCCCC-CGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCS---------------------C
T ss_pred             CCcccCCcHHH-cCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhc---------------------C
Confidence            79999999995 45589999999999999999999999997653222 1212111100                     0


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                      ...........++.++++||.+||..||++|||+.|+++||||.+.
T Consensus       233 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  278 (335)
T d2ozaa1         233 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  278 (335)
T ss_dssp             SSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred             CCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCC
Confidence            0000011123478899999999999999999999999999999753

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.90  E-value=5.4e-24  Score=139.50  Aligned_cols=101  Identities=23%  Similarity=0.308  Sum_probs=76.9

Q ss_pred             ccCcccchhhhcC-----CCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRIC-----SSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~-----~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      ||..|++||.+.+     ...++.++||||+||++|+|++|+.||.+.........+........               
T Consensus       171 gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~---------------  235 (277)
T d1phka_         171 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG---------------  235 (277)
T ss_dssp             SCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC---------------
T ss_pred             ccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCC---------------
Confidence            7899999998753     33578899999999999999999999987754443332221111000               


Q ss_pred             CCCCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           77 LPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                               ......+++++++|+.+||..||++||+++++++||||++.
T Consensus       236 ---------~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         236 ---------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             ---------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             ---------CcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence                     01123488999999999999999999999999999999863

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=2.2e-24  Score=145.92  Aligned_cols=127  Identities=21%  Similarity=0.365  Sum_probs=82.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCC-------hhHHHHHHHHhCCCCCCCCCCccchHHHh
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-------KDHLSLIVRLFGNPTKETWPGANYISELL   74 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (142)
                      ||+.|+|||++.+ ..++.++|+||+||++++|++|+.||....       .......+..++..+............+.
T Consensus       191 gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~  269 (362)
T d1q8ya_         191 QTREYRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFF  269 (362)
T ss_dssp             SCGGGCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHB
T ss_pred             ccccccChhhccc-cCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhccccccccc
Confidence            7889999999664 478999999999999999999999996542       13345555666654333221111111111


Q ss_pred             ------hcCCCCCCchhHhhh-------cCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccchhhc
Q 048170           75 ------HSLPQCEPADLAEKT-------HGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAH  129 (142)
Q Consensus        75 ------~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~~~~  129 (142)
                            ..+............       ...+.++.+||.+||.+||.+||||+|+|+||||+++...
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~~~  337 (362)
T d1q8ya_         270 NSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGM  337 (362)
T ss_dssp             CC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTC
T ss_pred             ccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCCCc
Confidence                  111111111111111       2245678999999999999999999999999999966443

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=6.6e-24  Score=141.71  Aligned_cols=100  Identities=19%  Similarity=0.236  Sum_probs=77.8

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||.+. ...++.++||||+||++|+|++|..||.+.........+.....                       
T Consensus       165 ~t~~y~ape~~~-~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~-----------------------  220 (321)
T d1tkia_         165 TAPEYYAPEVHQ-HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY-----------------------  220 (321)
T ss_dssp             SCGGGSCHHHHT-TCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC-----------------------
T ss_pred             cccccccchhcc-CCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----------------------
Confidence            688999999954 55899999999999999999999999987754433322221110                       


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcCCCccch
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEKL  126 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~~~~~~~  126 (142)
                       ......+..++.++++||.+||..||++|||++|+++||||.+.
T Consensus       221 -~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         221 -TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             -CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             -CCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence             11123345588999999999999999999999999999999753

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.3e-23  Score=138.36  Aligned_cols=101  Identities=19%  Similarity=0.261  Sum_probs=73.7

Q ss_pred             ccCcccchhhhcCCC-CCChhhhHHHHHHHHHHHHhCCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSS-VYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~-~~~~~~Diws~g~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|++||.+.+.. .++.++||||+||++|+|++|+.||.+.. ......+..........                 
T Consensus       192 g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~-----------------  254 (322)
T d1vzoa_         192 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP-----------------  254 (322)
T ss_dssp             SCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC-----------------
T ss_pred             cccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCC-----------------
Confidence            688999999976543 57889999999999999999999997662 22222222111100000                 


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCC-----CHHHHhcCCCccchh
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRV-----TANDALCIGTSEKLL  127 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-----t~~~~l~~~~~~~~~  127 (142)
                              .....+.++++||.+||.+||.+|+     |++|+++||||+++.
T Consensus       255 --------~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~  299 (322)
T d1vzoa_         255 --------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  299 (322)
T ss_dssp             --------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             --------CcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCC
Confidence                    1134788999999999999999999     589999999998753

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.3e-22  Score=131.69  Aligned_cols=96  Identities=20%  Similarity=0.223  Sum_probs=71.9

Q ss_pred             ccCcccchhhhcCC--CCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCC
Q 048170            2 VEFPYKAPESRICS--SVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLP   78 (142)
Q Consensus         2 ~t~~y~~PE~~~~~--~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (142)
                      ||+.|||||++.+.  ..++.++||||+||++|||++|+.||.+. ........+......+                  
T Consensus       168 gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p------------------  229 (276)
T d1uwha_         168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP------------------  229 (276)
T ss_dssp             CCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCC------------------
T ss_pred             cCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC------------------
Confidence            78999999997543  35899999999999999999999999866 3334433333211111                  


Q ss_pred             CCCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           79 QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                           ........++.++.+|+.+||..||++|||+++++++
T Consensus       230 -----~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         230 -----DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             -----CGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----cchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                 1112224478899999999999999999999999864

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=9.7e-23  Score=133.52  Aligned_cols=96  Identities=16%  Similarity=0.139  Sum_probs=72.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+ ..++.++||||+||++|||++ |+.||.+.....+...+.....++.                   
T Consensus       172 gt~~y~APE~l~~-~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~-------------------  231 (277)
T d1xbba_         172 WPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC-------------------  231 (277)
T ss_dssp             CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             CCceecCchhhcC-CCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            6889999999654 479999999999999999997 8999987755554444332111110                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh---cCCCccc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL---CIGTSEK  125 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l---~~~~~~~  125 (142)
                              ...++.++.+|+.+||..||++|||+++++   +|+|+.-
T Consensus       232 --------p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  271 (277)
T d1xbba_         232 --------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  271 (277)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             --------CcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhhc
Confidence                    123788999999999999999999999874   5555443

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.6e-22  Score=134.12  Aligned_cols=91  Identities=16%  Similarity=0.232  Sum_probs=69.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|||||++.+ ..++.++||||+||++|||++ |..||.+.. ...+..++.....++                   
T Consensus       228 gt~~y~aPE~l~~-~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~-------------------  287 (325)
T d1rjba_         228 LPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMD-------------------  287 (325)
T ss_dssp             ECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCC-------------------
T ss_pred             CCCccCChHHHcC-CCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC-------------------
Confidence            5889999999654 489999999999999999997 899998663 334444433211110                   


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                              ....++.++++||.+||..||++|||+++|++|
T Consensus       288 --------~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         288 --------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                    012378899999999999999999999999864

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=8.9e-22  Score=127.69  Aligned_cols=91  Identities=18%  Similarity=0.172  Sum_probs=70.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++.+ ..++.++||||+|+++|||++ |+.||.......+...+........                   
T Consensus       163 ~t~~y~aPE~~~~-~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~-------------------  222 (258)
T d1k2pa_         163 FPVRWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-------------------  222 (258)
T ss_dssp             CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC-------------------
T ss_pred             CCCCcCCcHHhcC-CCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCC-------------------
Confidence            6788999999654 489999999999999999997 7999987755544443332111111                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                              ....+.++.+|+.+||..||++|||++++++|
T Consensus       223 --------p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         223 --------PHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             --------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             --------cccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence                    02367789999999999999999999999875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.85  E-value=2.7e-22  Score=131.40  Aligned_cols=95  Identities=21%  Similarity=0.325  Sum_probs=67.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHH-HHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++. ...++.++||||+||++|+|++|+.||.+...... ..++.. ..                      
T Consensus       176 Gt~~Y~aPE~~~-~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~-~~----------------------  231 (277)
T d1o6ya_         176 GTAQYLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-DP----------------------  231 (277)
T ss_dssp             ---TTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC-CC----------------------
T ss_pred             CcccccCHHHHc-CCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhc-CC----------------------
Confidence            789999999965 44899999999999999999999999986644332 222221 11                      


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCC-CHHHHhcCCCc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRV-TANDALCIGTS  123 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-t~~~~l~~~~~  123 (142)
                        .........++.++.+||.+||.+||++|| ++++++ |+|.
T Consensus       232 --~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~-~~l~  272 (277)
T d1o6ya_         232 --IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR-ADLV  272 (277)
T ss_dssp             --CCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHH-HHHH
T ss_pred             --CCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHH-HHHH
Confidence              011122345889999999999999999999 566553 4443

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.7e-21  Score=125.72  Aligned_cols=91  Identities=16%  Similarity=0.155  Sum_probs=67.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhC-CCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSG-KPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++. ...++.++||||+||++|||+++ .+++.......+...+........                   
T Consensus       164 gt~~y~aPE~l~-~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~-------------------  223 (263)
T d1sm2a_         164 FPVKWASPEVFS-FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK-------------------  223 (263)
T ss_dssp             -CTTSCCHHHHT-TCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCC-------------------
T ss_pred             cCcccCChHHhc-CCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCC-------------------
Confidence            678899999955 44899999999999999999985 666655555444333332211111                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                              ....+.++.+|+.+||..||++|||+++++++
T Consensus       224 --------p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         224 --------PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             --------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------ccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence                    12367889999999999999999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.7e-21  Score=129.72  Aligned_cols=91  Identities=18%  Similarity=0.217  Sum_probs=72.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+. .++.++||||+||++|||++ |..||.+.....+..++.....++.                   
T Consensus       175 gt~~y~APE~l~~~-~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~-------------------  234 (317)
T d1xkka_         175 VPIKWMALESILHR-IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ-------------------  234 (317)
T ss_dssp             CCTTTSCHHHHHHC-CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCC-------------------
T ss_pred             cCccccChHHHhcC-CCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            68899999996655 89999999999999999998 7899977655555444443222111                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                              ...++.++.+|+.+||..||++|||+.++++|
T Consensus       235 --------p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         235 --------PPICTIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             --------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------CcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence                    12367889999999999999999999999876

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2e-21  Score=126.93  Aligned_cols=91  Identities=19%  Similarity=0.238  Sum_probs=70.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++. ...++.++||||+||++|||++ |.+||.......+...+.....++                    
T Consensus       171 gt~~y~apE~l~-~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~--------------------  229 (273)
T d1mp8a_         171 LPIKWMAPESIN-FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP--------------------  229 (273)
T ss_dssp             CCGGGCCHHHHH-HCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC--------------------
T ss_pred             cCcccchhhHhc-cCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC--------------------
Confidence            678999999965 4489999999999999999997 889997764444333332211110                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                             ....++.++.+||.+||..||++|||+.+++++
T Consensus       230 -------~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         230 -------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                   113478899999999999999999999999865

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=3.6e-21  Score=127.23  Aligned_cols=90  Identities=16%  Similarity=0.197  Sum_probs=68.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||.+.+ ..++.++||||+||++|||++ |..||.+.....+...+.....++.                   
T Consensus       195 ~t~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~-------------------  254 (299)
T d1jpaa_         195 IPIRWTAPEAIQY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP-------------------  254 (299)
T ss_dssp             -CGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             CCccccCHHHHhc-CCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            5788999999554 489999999999999999997 8999987655444333322111110                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                              ...++.++.+|+.+||..||++|||+.++++
T Consensus       255 --------~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~  285 (299)
T d1jpaa_         255 --------PMDCPSALHQLMLDCWQKDRNHRPKFGQIVN  285 (299)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             --------CccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                    1237888999999999999999999999874

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4e-21  Score=126.99  Aligned_cols=91  Identities=19%  Similarity=0.257  Sum_probs=69.0

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhC-CCCcCCCC-hhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSG-KPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|+|||++.+ ..++.++||||+||++|||+++ .+||.+.. .......+.....+..                  
T Consensus       198 gt~~y~APE~l~~-~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~------------------  258 (299)
T d1ywna1         198 LPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA------------------  258 (299)
T ss_dssp             CGGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCC------------------
T ss_pred             eCccccchhHhhc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCC------------------
Confidence            7889999999654 4899999999999999999986 56786553 3333333332221111                  


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                               ...++.++.+|+.+||..||++|||++++++|
T Consensus       259 ---------~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         259 ---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             ---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                     12367889999999999999999999999875

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.6e-21  Score=127.42  Aligned_cols=95  Identities=15%  Similarity=0.156  Sum_probs=69.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCC-CCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK-PLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+ ..++.++||||+||++|||++|. +++...........+.....+..                   
T Consensus       172 gt~~y~APE~~~~-~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~-------------------  231 (272)
T d1qpca_         172 FPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR-------------------  231 (272)
T ss_dssp             CCTTTSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             CcccccChHHHhC-CCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC-------------------
Confidence            6788999999654 47899999999999999999965 45544444333332221111100                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc--CCCcc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC--IGTSE  124 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~--~~~~~  124 (142)
                              ...++.++.+|+.+||..||++|||++++++  ++||.
T Consensus       232 --------p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         232 --------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --------cccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence                    1237788999999999999999999999986  66664

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=4.6e-21  Score=125.90  Aligned_cols=95  Identities=16%  Similarity=0.127  Sum_probs=71.7

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++.+ ..++.++||||+||++|||++ |..||.+.....+...+.....+.                    
T Consensus       174 gt~~y~aPE~~~~-~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~--------------------  232 (285)
T d1u59a_         174 WPLKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME--------------------  232 (285)
T ss_dssp             CCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCC--------------------
T ss_pred             cCccccChHHHhC-CCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--------------------
Confidence            6788999999654 489999999999999999997 899998764444333333211110                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHH---hcCCCcc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA---LCIGTSE  124 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~---l~~~~~~  124 (142)
                             ....++.++.+|+.+||..||++|||+.++   |++.|+.
T Consensus       233 -------~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         233 -------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             -------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -------CCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence                   113478899999999999999999999887   5666654

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.2e-20  Score=124.67  Aligned_cols=90  Identities=18%  Similarity=0.274  Sum_probs=70.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||.+.+ ..|+.++||||||+++|||++ |.+||.+.....+...+.....+..                   
T Consensus       199 ~~~~y~aPE~l~~-~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~-------------------  258 (299)
T d1fgka_         199 LPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK-------------------  258 (299)
T ss_dssp             CGGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             CChhhhhhhHhcC-CCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            6788999999654 489999999999999999997 6888876666555444432211111                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                              ...++.++++||.+||..||++|||+.++++
T Consensus       259 --------p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         259 --------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             --------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence                    1237888999999999999999999999985

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=9.4e-21  Score=123.07  Aligned_cols=90  Identities=21%  Similarity=0.255  Sum_probs=68.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      +|..|+|||++.+. .++.++|||||||++|||++ |.+||.......+...+.....+                     
T Consensus       162 ~~~~y~aPE~l~~~-~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~---------------------  219 (262)
T d1byga_         162 LPVKWTAPEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM---------------------  219 (262)
T ss_dssp             CCTTTSCHHHHHHC-CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCC---------------------
T ss_pred             ccccCCChHHHhCC-CCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---------------------
Confidence            57889999996554 89999999999999999998 68888766554443333211110                     


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            +....++.++++|+.+||..||.+|||+.++++
T Consensus       220 ------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~  252 (262)
T d1byga_         220 ------DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  252 (262)
T ss_dssp             ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------CCCccCCHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence                  011236789999999999999999999999985

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=8.5e-21  Score=124.63  Aligned_cols=98  Identities=16%  Similarity=0.136  Sum_probs=72.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCc-CCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF-PCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||++. ...++.++||||+||++|||++|..|+ .......+...+.....++                    
T Consensus       176 gt~~y~aPE~~~-~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~--------------------  234 (285)
T d1fmka3         176 FPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--------------------  234 (285)
T ss_dssp             CCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC--------------------
T ss_pred             ccccccChHHHh-CCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC--------------------
Confidence            688999999965 448999999999999999999965554 4444443333332111111                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc--CCCccchh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC--IGTSEKLL  127 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~--~~~~~~~~  127 (142)
                             ....++.++.+|+.+||+.||++||+++++++  ++||....
T Consensus       235 -------~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         235 -------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             -------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             -------CCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence                   11337889999999999999999999999987  88887653

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.5e-20  Score=122.32  Aligned_cols=90  Identities=13%  Similarity=0.098  Sum_probs=66.3

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCc-CCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF-PCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++. ...++.++||||+||++|||+++..|+ .......+...+.....++.                   
T Consensus       175 gt~~Y~APE~l~-~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~-------------------  234 (283)
T d1mqba_         175 IPIRWTAPEAIS-YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPT-------------------  234 (283)
T ss_dssp             CCGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             CCccccCHHHHc-cCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCC-------------------
Confidence            688899999965 448999999999999999999965554 33344444333322111111                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                              ...++.++.+|+.+||..||++|||+.++++
T Consensus       235 --------~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         235 --------PMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             --------CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             --------chhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence                    1236778999999999999999999999875

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.1e-20  Score=123.45  Aligned_cols=90  Identities=19%  Similarity=0.247  Sum_probs=68.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||.+.+ ..++.++||||||+++|||++ |..||.+.+.......+...+..++                   
T Consensus       176 ~~~~~~aPE~~~~-~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~-------------------  235 (273)
T d1u46a_         176 VPFAWCAPESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP-------------------  235 (273)
T ss_dssp             CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCC-------------------
T ss_pred             cCcccCCHHHHhC-CCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCC-------------------
Confidence            5778999999654 489999999999999999997 8999987755443332221111111                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                             ....++.++.+|+.+||..||++|||+++++
T Consensus       236 -------~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~  266 (273)
T d1u46a_         236 -------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALR  266 (273)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             -------CcccccHHHHHHHHHHcCCChhHCcCHHHHH
Confidence                   1134778999999999999999999999986

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=4.9e-20  Score=121.11  Aligned_cols=90  Identities=18%  Similarity=0.175  Sum_probs=67.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcC-CCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||++.+. .++.++||||+||++|||++|..|+. ......+..++.....+                     
T Consensus       178 g~~~y~aPE~~~~~-~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~---------------------  235 (287)
T d1opja_         178 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM---------------------  235 (287)
T ss_dssp             ECGGGCCHHHHHHC-CCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC---------------------
T ss_pred             ccccccChHHHcCC-CCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCC---------------------
Confidence            57889999996544 89999999999999999999766554 33554444443321110                     


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                            .....++.++.+|+.+||..||++|||++++++
T Consensus       236 ------~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         236 ------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                  011347889999999999999999999999974

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.9e-20  Score=123.34  Aligned_cols=91  Identities=23%  Similarity=0.163  Sum_probs=69.2

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCC-CCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK-PLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||.+.+ ..++.++|||||||++|||++|. +||.+.....+...+.....+.                    
T Consensus       188 gt~~y~aPE~l~~-~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~--------------------  246 (309)
T d1fvra_         188 LPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE--------------------  246 (309)
T ss_dssp             CCTTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCC--------------------
T ss_pred             cCCcccchHHhcc-CCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCC--------------------
Confidence            7889999999654 48999999999999999999975 6776655555433332111110                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                             ....++.++.+||.+||..||++|||+++++++
T Consensus       247 -------~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         247 -------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             -------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                   012367899999999999999999999999975

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.80  E-value=9.9e-20  Score=120.37  Aligned_cols=89  Identities=19%  Similarity=0.167  Sum_probs=67.9

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCC-CCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK-PLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||.+.+ ..++.++|||||||++|||++|. +||.+.....+...+.....++                    
T Consensus       204 ~~~~y~aPE~~~~-~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~--------------------  262 (301)
T d1lufa_         204 IPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILA--------------------  262 (301)
T ss_dssp             BCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCC--------------------
T ss_pred             cCcCcCCHHHHcc-CCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC--------------------
Confidence            6788999999654 48999999999999999999985 6776665544433333211110                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                             ....++.++.+|+.+||..||++|||+.+++
T Consensus       263 -------~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~  293 (301)
T d1lufa_         263 -------CPENCPLELYNLMRLCWSKLPADRPSFCSIH  293 (301)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             -------CCccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence                   1134778999999999999999999999986

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1e-19  Score=120.77  Aligned_cols=90  Identities=20%  Similarity=0.253  Sum_probs=67.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHh-CCCCcCCCCh-hHHHHHHHHhCCCCCCCCCCccchHHHhhcCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVS-GKPLFPCGKK-DHLSLIVRLFGNPTKETWPGANYISELLHSLPQ   79 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (142)
                      ||+.|+|||++.+ ..++.++|||||||++|||++ |.++|..... ..+..++.....+...                 
T Consensus       209 gt~~y~aPE~~~~-~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~-----------------  270 (311)
T d1t46a_         209 LPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP-----------------  270 (311)
T ss_dssp             ECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCC-----------------
T ss_pred             cChHHcCHHHhcC-CCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCc-----------------
Confidence            6889999999654 489999999999999999998 5666655533 3444444322111111                 


Q ss_pred             CCCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           80 CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                                ...+.++.+||.+||..||++|||++++++
T Consensus       271 ----------~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         271 ----------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             ----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------ccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                      236788999999999999999999999884

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.9e-19  Score=119.31  Aligned_cols=96  Identities=18%  Similarity=0.194  Sum_probs=71.6

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhC-CCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSG-KPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|+|||.+.+ ..++.++||||+|+++|||++| ..||.+.........+.....++.                   
T Consensus       197 ~t~~y~aPe~l~~-~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~-------------------  256 (308)
T d1p4oa_         197 LPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-------------------  256 (308)
T ss_dssp             ECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCC-------------------
T ss_pred             cccccCCHHHHcc-CCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCC-------------------
Confidence            5788999999654 4889999999999999999998 477766655444333322111110                   


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhc------CCCccc
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC------IGTSEK  125 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~------~~~~~~  125 (142)
                              ...++.++.+||.+||+.||++|||+.++++      +|+|++
T Consensus       257 --------p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         257 --------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             --------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence                    1236788999999999999999999999886      566554

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.79  E-value=6.5e-20  Score=121.09  Aligned_cols=102  Identities=10%  Similarity=-0.028  Sum_probs=69.5

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCE   81 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (142)
                      ||+.|+|||++. +..++.++||||+||++|||++|..||...........+....              ...      .
T Consensus       175 gt~~y~aPE~~~-~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~--------------~~~------~  233 (299)
T d1ckia_         175 GTARYASINTHL-GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS--------------EKK------M  233 (299)
T ss_dssp             CCSSSCCHHHHT-TBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHH--------------HHH------H
T ss_pred             CCccccCHHHHh-CCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhh--------------ccc------C
Confidence            799999999955 4479999999999999999999999997653222111110000              000      0


Q ss_pred             CchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHH---HhcCCCcc
Q 048170           82 PADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAND---ALCIGTSE  124 (142)
Q Consensus        82 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~---~l~~~~~~  124 (142)
                      ..+.......++.++.+|+.+||..+|++||++++   +++++|.+
T Consensus       234 ~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         234 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             HSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             CCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence            01122334568899999999999999999999875   45665543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.2e-19  Score=120.52  Aligned_cols=91  Identities=12%  Similarity=0.104  Sum_probs=65.4

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCC-ChhHHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG-KKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||..|+|||.+. ...++.++||||||+++|||++|..||... ........+.....+.                    
T Consensus       196 gt~~y~aPE~~~-~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~--------------------  254 (311)
T d1r0pa_         196 LPVKWMALESLQ-TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL--------------------  254 (311)
T ss_dssp             CCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCC--------------------
T ss_pred             ccccccChHHHh-cCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC--------------------
Confidence            678899999955 448999999999999999999987777544 2222222211111100                    


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHhcC
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCI  120 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~~  120 (142)
                             ....+++++.+|+.+||..||++||++.+++++
T Consensus       255 -------~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         255 -------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------CcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                   012367889999999999999999999999976

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.72  E-value=2.7e-18  Score=113.05  Aligned_cols=95  Identities=14%  Similarity=0.053  Sum_probs=68.1

Q ss_pred             ccCcccchhhhcCCCCCChhhhHHHHHHHHHHHHhCCCCcCCCChh-HHHHHHHHhCCCCCCCCCCccchHHHhhcCCCC
Q 048170            2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKD-HLSLIVRLFGNPTKETWPGANYISELLHSLPQC   80 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (142)
                      ||+.|||||++. ...++.++|+||+|+++|+|++|..||.+.... ..........               ..      
T Consensus       175 GT~~y~aPE~~~-~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~---------------~~------  232 (293)
T d1csna_         175 GTARYMSINTHL-GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE---------------KK------  232 (293)
T ss_dssp             SCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHH---------------HH------
T ss_pred             EchhhcCHHHhc-CCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHh---------------cc------
Confidence            899999999965 458999999999999999999999999755221 1111110000               00      


Q ss_pred             CCchhHhhhcCCCchHHHHHHHhcccCCCCCCCHHHHh
Q 048170           81 EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL  118 (142)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l  118 (142)
                      ...+..+....++.++.+++..|+..+|++||+.+.+.
T Consensus       233 ~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         233 QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             HHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             CCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence            00122334456888999999999999999999987664

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.8e-18  Score=114.34  Aligned_cols=109  Identities=16%  Similarity=0.117  Sum_probs=61.9

Q ss_pred             ccCcccchhhhcCCC-----CCChhhhHHHHHHHHHHHHhCCCCcCCCChhHHHHHHHHhCCCCCCCCCCccchHHHhhc
Q 048170            2 VEFPYKAPESRICSS-----VYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHS   76 (142)
Q Consensus         2 ~t~~y~~PE~~~~~~-----~~~~~~Diws~g~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (142)
                      ||+.|+|||++.+..     .++.++|||||||++|||++|..|+.........         .................
T Consensus       174 gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~  244 (303)
T d1vjya_         174 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP---------YYDLVPSDPSVEEMRKV  244 (303)
T ss_dssp             SCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT---------TTTTSCSSCCHHHHHHH
T ss_pred             cccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccc---------hhhcccccchHHHHHHH
Confidence            789999999964432     2567899999999999999998776432111000         00000000000111000


Q ss_pred             C-CCCCCchhHhh--hcCCCchHHHHHHHhcccCCCCCCCHHHHhc
Q 048170           77 L-PQCEPADLAEK--THGLEPSGVELLSQMLCLDPDHRVTANDALC  119 (142)
Q Consensus        77 ~-~~~~~~~~~~~--~~~~~~~~~~ll~~~l~~~p~~R~t~~~~l~  119 (142)
                      . ...........  .......+.+|+.+||..||++|||+.|+++
T Consensus       245 ~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         245 VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             HTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             HhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            0 00000000000  1112345789999999999999999999875