Citrus Sinensis ID: 048181

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
MAATLSLFVFVFSLPRMVFSIPTFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEAQYSTTPISEVQPFGGAL
ccEEEHHHHHHccccccccccccccCECcccccccccCEEECccccCEEEECcccEEEEEEccccCEEEEEEccccccccccccccccccccccccccEEEEccccEEEEEEccccEEEECccccEEEEEEccccccCEccccccEECccccEEEEEccccccccccEEEEEECcccccEEEEECcccccEEEEEcccccccCEEEcccccEEEEEEccccEEEEEEEcccccccEEEEcccccccccEEcccccccEEEEEEEcccccccccccEEEEcccccEEEEEEcccccccccEEEEEEccccc
MAATLSLFVFVFSLPRMVFSIPTFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEAQYSTTPISEVQPFGG*L
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SSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAATLSLFVFVFSLPRMVFSIPTFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEAQYSTTPISEVQPFGGAL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Strictosidine synthase 1 Catalyzes the stereospecific condensation of tryptamine with secologanin to form strictosidine, the key intermediate of indole alkaloid biosynthesis.probableP94111

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
4.3.-.-Carbon-nitrogen lyases.probable
4.3.3.-Amine-lyases.probable
4.3.3.2Strictosidine synthase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2FP8, chain A
Confidence level:very confident
Coverage over the Query: 25-310
View the alignment between query and template
View the model in PyMOL