Citrus Sinensis ID: 048192
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 422 | ||||||
| 338190111 | 830 | lectin-domain receptor-like kinase [Nico | 0.966 | 0.491 | 0.590 | 1e-144 | |
| 255569831 | 457 | S-locus-specific glycoprotein precursor, | 0.902 | 0.833 | 0.646 | 1e-139 | |
| 255569833 | 837 | serine-threonine protein kinase, plant-t | 0.902 | 0.455 | 0.633 | 1e-137 | |
| 255569825 | 870 | serine-threonine protein kinase, plant-t | 0.936 | 0.454 | 0.533 | 1e-119 | |
| 359485463 | 848 | PREDICTED: G-type lectin S-receptor-like | 0.957 | 0.476 | 0.511 | 1e-114 | |
| 302143473 | 830 | unnamed protein product [Vitis vinifera] | 0.957 | 0.486 | 0.511 | 1e-114 | |
| 116309112 | 838 | OSIGBa0157N01.3 [Oryza sativa Indica Gro | 0.964 | 0.485 | 0.475 | 1e-110 | |
| 125547684 | 863 | hypothetical protein OsI_15301 [Oryza sa | 0.971 | 0.475 | 0.474 | 1e-110 | |
| 357160794 | 846 | PREDICTED: G-type lectin S-receptor-like | 0.973 | 0.485 | 0.469 | 1e-109 | |
| 38344588 | 838 | OSJNBa0079M09.4 [Oryza sativa Japonica G | 0.964 | 0.485 | 0.473 | 1e-107 |
| >gi|338190111|gb|AEI84329.1| lectin-domain receptor-like kinase [Nicotiana attenuata] | Back alignment and taxonomy information |
|---|
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/427 (59%), Positives = 311/427 (72%), Gaps = 19/427 (4%)
Query: 1 GTFGPTYACGFFCNGTCDSYLFAVFIVHAYDASLIEYQHTEFPQVVWSANRNNLVRINAT 60
GTFGP YACGF+CNG C+SY+FA+FIV SLI FPQVVWSANRNN V+IN+T
Sbjct: 61 GTFGPRYACGFYCNGNCESYIFAIFIVQTNSISLITMPAIGFPQVVWSANRNNPVKINST 120
Query: 61 LELTSDGNLVLQDADGAIAWSTNTSGKSVVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDS 120
L+LT+ G+LVL+DADG +AWSTN++GKSV GLNLTD GNLVLFD NA VWQSFDHPTDS
Sbjct: 121 LQLTAQGDLVLRDADGTLAWSTNSTGKSVAGLNLTDEGNLVLFDSKNATVWQSFDHPTDS 180
Query: 121 LVPGQKLLEGKKLTASVSTTNWTDGGLFSLSVSNKGLFAFIESNNTSIRYYELVKATKTS 180
LVPGQKL+ G KLTASVSTTNWT GGLFS S +N GL AF+ESN + + + TS
Sbjct: 181 LVPGQKLVPGMKLTASVSTTNWTKGGLFSFSATNDGLVAFVESNPPQTYFEKSIGGLNTS 240
Query: 181 KEPSHARYLNGSLAFFINSSEPREPDGAVPVPPASSSPGQYMRLWPDGHLRVYEWQASIG 240
++ YLNGSLA NSS+ P + +PPASS+ QYM+L DGHL+VYEWQ+
Sbjct: 241 GGSNYVMYLNGSLALLSNSSDSNNPRTLISIPPASSA--QYMKLESDGHLKVYEWQSR-- 296
Query: 241 WTQVADLLEGYHGECGYPMVCGKYGICSQGQCSCP------ATYFKLLNDRQPALGCSPI 294
W +V DLL G++GEC YPM+CG+YGICS+GQCSCP +YF+ ++DRQ LGC+ +
Sbjct: 297 WNEVNDLLTGFNGECYYPMICGRYGICSRGQCSCPKSSSNSTSYFRQIDDRQGNLGCAEV 356
Query: 295 TPLSCEASQDHSFVELNDVAYFAFSSPSSDLTNTDPETCKQACLKNCSCKAALFLYGLNL 354
T L+C A +H F+EL DV YF F ++D+ NTD CK ACL+NCSCKAALF GLN
Sbjct: 357 TRLTCNALNNHRFLELQDVDYFTF---TADIKNTDMNACKDACLRNCSCKAALFRSGLNS 413
Query: 355 SPGDCYLPSELFSMMNNEKERTHYNSTAYIKVQNFSMPRASLGGKETSHRKRIMGFILGS 414
S GDCYLPSE++S+ NNEKE+T YNS A++KVQ + P A+ +KR+ G +LGS
Sbjct: 414 STGDCYLPSEIYSLANNEKEKTRYNSYAFVKVQVEAEPAAA------KEKKRVSGVVLGS 467
Query: 415 FFGLLVL 421
GL +L
Sbjct: 468 VIGLAIL 474
|
Source: Nicotiana attenuata Species: Nicotiana attenuata Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255569831|ref|XP_002525879.1| S-locus-specific glycoprotein precursor, putative [Ricinus communis] gi|223534793|gb|EEF36483.1| S-locus-specific glycoprotein precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255569833|ref|XP_002525880.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223534794|gb|EEF36484.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255569825|ref|XP_002525876.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223534790|gb|EEF36480.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|359485463|ref|XP_003633280.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|302143473|emb|CBI22034.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|116309112|emb|CAH66217.1| OSIGBa0157N01.3 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
| >gi|125547684|gb|EAY93506.1| hypothetical protein OsI_15301 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
| >gi|357160794|ref|XP_003578878.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like isoform 1 [Brachypodium distachyon] gi|357160797|ref|XP_003578879.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like isoform 2 [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
| >gi|38344588|emb|CAE05335.2| OSJNBa0079M09.4 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 422 | ||||||
| TAIR|locus:2037568 | 443 | AT1G78860 [Arabidopsis thalian | 0.848 | 0.808 | 0.300 | 9.5e-34 | |
| TAIR|locus:2037508 | 441 | AT1G78850 [Arabidopsis thalian | 0.831 | 0.795 | 0.312 | 6.7e-33 | |
| TAIR|locus:4010713447 | 423 | AT1G16905 [Arabidopsis thalian | 0.763 | 0.761 | 0.298 | 2.3e-30 | |
| TAIR|locus:2182603 | 872 | AT5G35370 [Arabidopsis thalian | 0.755 | 0.365 | 0.302 | 7.3e-28 | |
| TAIR|locus:2037548 | 455 | AT1G78830 [Arabidopsis thalian | 0.355 | 0.329 | 0.422 | 3.3e-27 | |
| UNIPROTKB|Q39688 | 389 | EP1 "Epidermis-specific secret | 0.327 | 0.354 | 0.433 | 1.6e-26 | |
| TAIR|locus:2116525 | 821 | SD2-5 "S-domain-2 5" [Arabidop | 0.308 | 0.158 | 0.318 | 7.3e-24 | |
| TAIR|locus:2037563 | 455 | AT1G78820 [Arabidopsis thalian | 0.355 | 0.329 | 0.403 | 8.6e-24 | |
| TAIR|locus:2141176 | 849 | B120 [Arabidopsis thaliana (ta | 0.732 | 0.363 | 0.286 | 1.6e-21 | |
| TAIR|locus:2059103 | 828 | AT2G19130 [Arabidopsis thalian | 0.912 | 0.464 | 0.254 | 1.5e-20 |
| TAIR|locus:2037568 AT1G78860 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 121/402 (30%), Positives = 181/402 (45%)
Query: 12 FCNGTCDSYLFAVFIVHAYDASLIEYQHTEFPQVVWSANRNNLVRINATLELTSDGNLVL 71
F N T ++Y A+ I + S + + VW ANR + V+ NATL DGNLVL
Sbjct: 64 FYNTTQNAYTLALRIGNRAQESTLRW--------VWEANRGSPVKENATLTFGEDGNLVL 115
Query: 72 QDADGAIAWSTNTSGKSVVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSLVPGQKL-LEG 130
+ADG + W TNT+ K VVG+ + + GN+V++D N VWQSFD PTD+L+ GQ L L G
Sbjct: 116 AEADGRVVWQTNTANKGVVGIKILENGNMVIYDSNGKFVWQSFDSPTDTLLVGQSLKLNG 175
Query: 131 KKLTASVSTTNWTDGGLFSLSVSNKGLFAFIESNNTS--IRYYELVKATKTSKEPSHARY 188
+ S + + G +SL + K L + +N T I YYE TK ++ S
Sbjct: 176 QNKLVSRLSPSVNANGPYSLVMEAKKLVLYYTTNKTPKPIGYYEYEFFTKIAQLQSMTFQ 235
Query: 189 L--NGSLAFFIN----SSEPREPDGXXXXXXXXXXXGQYMRLWPDGHLRVYEWQA---SI 239
+ + ++ S + ++RL DG++RV+ + S
Sbjct: 236 AVEDADTTWGLHMEGVDSGSQFNVSTFLSRPKHNATLSFLRLESDGNIRVWSYSTLATST 295
Query: 240 GW--TQVA---DLLEGYHGECGYPMVCGKYGICSQGQCS-CPATYFKLLNDRQPALGCSP 293
W T A D +G + EC P C +G+C +GQC+ CP+ L D C
Sbjct: 296 AWDVTYTAFTNDNTDG-NDECRIPEHCLGFGLCKKGQCNACPSDIGLLGWDET----CKI 350
Query: 294 ITPLSCEASQDHSF-VELNDVAYFAFSSPSSDLTNTDPETCKQACLKNCSCKAALFLYGL 352
+ SC+ H F +E D +F + + + T C C ++C C F Y
Sbjct: 351 PSLASCDPKTFHYFKIEGAD----SFMTKYNGGSTTTESACGDKCTRDCKCLG--FFY-- 402
Query: 353 NLSPGDCYLPSELFSMMNNEKERTHYNSTAYIKVQNFSMPRA 394
N C+L EL ++ + AY+K N S A
Sbjct: 403 NRKSSRCWLGYELKTLTKTGDT----SLVAYVKAPNASKKSA 440
|
|
| TAIR|locus:2037508 AT1G78850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:4010713447 AT1G16905 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2182603 AT5G35370 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037548 AT1G78830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q39688 EP1 "Epidermis-specific secreted glycoprotein EP1" [Daucus carota (taxid:4039)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037563 AT1G78820 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 422 | |||
| pfam01453 | 109 | pfam01453, B_lectin, D-mannose binding lectin | 4e-30 | |
| cd00028 | 116 | cd00028, B_lectin, Bulb-type mannose-specific lect | 3e-24 | |
| smart00108 | 114 | smart00108, B_lectin, Bulb-type mannose-specific l | 2e-23 | |
| cd01098 | 84 | cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain | 4e-11 | |
| pfam01453 | 109 | pfam01453, B_lectin, D-mannose binding lectin | 9e-08 | |
| pfam08276 | 66 | pfam08276, PAN_2, PAN-like domain | 4e-04 |
| >gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 4e-30
Identities = 49/85 (57%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Query: 45 VVWSANRNNLVRI-NATLELTSDGNLVLQDADGAIAWSTNTSGK-SVVGLNLTDMGNLVL 102
VVW ANR N + + TL L SDGNLVL D +G + WS+NTSGK S L D GNLVL
Sbjct: 4 VVWVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSGCVAVLQDDGNLVL 63
Query: 103 FDKNNAAVWQSFDHPTDSLVPGQKL 127
+D + +WQSFDHPTD+L+PGQK
Sbjct: 64 YDNSGKVLWQSFDHPTDTLLPGQKD 88
|
These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109 |
| >gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
| >gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
| >gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins | Back alignment and domain information |
|---|
| >gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin | Back alignment and domain information |
|---|
| >gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 422 | |||
| PF01453 | 114 | B_lectin: D-mannose binding lectin; InterPro: IPR0 | 99.96 | |
| cd00028 | 116 | B_lectin Bulb-type mannose-specific lectin. The do | 99.92 | |
| smart00108 | 114 | B_lectin Bulb-type mannose-specific lectin. | 99.91 | |
| PF00954 | 110 | S_locus_glycop: S-locus glycoprotein family; Inter | 99.78 | |
| PF08276 | 66 | PAN_2: PAN-like domain; InterPro: IPR013227 PAN do | 99.42 | |
| cd01098 | 84 | PAN_AP_plant Plant PAN/APPLE-like domain; present | 99.39 | |
| cd00129 | 80 | PAN_APPLE PAN/APPLE-like domain; present in N-term | 99.12 | |
| smart00108 | 114 | B_lectin Bulb-type mannose-specific lectin. | 98.7 | |
| cd00028 | 116 | B_lectin Bulb-type mannose-specific lectin. The do | 98.61 | |
| smart00473 | 78 | PAN_AP divergent subfamily of APPLE domains. Apple | 98.14 | |
| PF01453 | 114 | B_lectin: D-mannose binding lectin; InterPro: IPR0 | 98.02 | |
| cd01100 | 73 | APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d | 97.61 | |
| smart00605 | 94 | CW CW domain. | 91.79 | |
| PF08277 | 71 | PAN_3: PAN-like domain; InterPro: IPR006583 PAN do | 90.86 | |
| smart00223 | 79 | APPLE APPLE domain. Four-fold repeat in plasma kal | 89.66 | |
| PF14295 | 51 | PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A. | 89.57 | |
| PF00024 | 79 | PAN_1: PAN domain This Prosite entry concerns appl | 89.07 | |
| cd01099 | 80 | PAN_AP_HGF Subfamily of PAN/APPLE-like domains; pr | 83.57 | |
| PF01683 | 52 | EB: EB module; InterPro: IPR006149 The EB domain h | 83.55 |
| >PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-30 Score=215.25 Aligned_cols=101 Identities=53% Similarity=0.808 Sum_probs=75.6
Q ss_pred CcEEEEcCCCCCCCC---CcEEEEecCccEEEEcCCCCEEEee-CCCCCc--eeEEEEecCCCeeEEcCCCcEEEeccCC
Q 048192 43 PQVVWSANRNNLVRI---NATLELTSDGNLVLQDADGAIAWST-NTSGKS--VVGLNLTDMGNLVLFDKNNAAVWQSFDH 116 (422)
Q Consensus 43 ~~vVW~ANr~~pv~~---~~~L~l~~~G~LvL~~~~~~~vWst-~~~~~~--~~~~~LldsGNLVL~~~~~~~lWQSFd~ 116 (422)
++|||+|||+.|+.. ..+|.|+.||+|+|.+..++.+|++ ++.+.+ ...|.|+|+|||||+|..+.+|||||||
T Consensus 2 ~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~~ 81 (114)
T PF01453_consen 2 RTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFDY 81 (114)
T ss_dssp --------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTTS
T ss_pred cccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecCC
Confidence 789999999999943 3899999999999999988899999 666554 7889999999999999999999999999
Q ss_pred CCCccCCCceecCC------CeeeeecCCCCCC
Q 048192 117 PTDSLVPGQKLLEG------KKLTASVSTTNWT 143 (422)
Q Consensus 117 PTDTlLpgq~l~~~------~~L~S~~s~~d~s 143 (422)
||||+||+|+|+.+ ..|+||++.+|||
T Consensus 82 ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps 114 (114)
T PF01453_consen 82 PTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS 114 (114)
T ss_dssp SS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred CccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence 99999999999873 3499999999986
|
Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B .... |
| >cd00028 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
| >smart00108 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
| >PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation | Back alignment and domain information |
|---|
| >PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] | Back alignment and domain information |
|---|
| >cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins | Back alignment and domain information |
|---|
| >cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins | Back alignment and domain information |
|---|
| >smart00108 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
| >cd00028 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
| >smart00473 PAN_AP divergent subfamily of APPLE domains | Back alignment and domain information |
|---|
| >PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity | Back alignment and domain information |
|---|
| >cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins | Back alignment and domain information |
|---|
| >smart00605 CW CW domain | Back alignment and domain information |
|---|
| >PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] | Back alignment and domain information |
|---|
| >smart00223 APPLE APPLE domain | Back alignment and domain information |
|---|
| >PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A | Back alignment and domain information |
|---|
| >PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] | Back alignment and domain information |
|---|
| >cd01099 PAN_AP_HGF Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins | Back alignment and domain information |
|---|
| >PF01683 EB: EB module; InterPro: IPR006149 The EB domain has no known function | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 422 | |||
| 1kj1_A | 109 | Lectin I, lecgna 1; BULB lectin, mannose, plant pr | 2e-15 | |
| 1kj1_A | 109 | Lectin I, lecgna 1; BULB lectin, mannose, plant pr | 2e-10 | |
| 1b2p_A | 119 | Protein (lectin); mannose-binding lectin, monocot, | 3e-13 | |
| 1b2p_A | 119 | Protein (lectin); mannose-binding lectin, monocot, | 6e-12 | |
| 1xd5_A | 112 | Gastrodianin-1, antifungal protein GAFP-1; monocot | 5e-12 | |
| 1xd5_A | 112 | Gastrodianin-1, antifungal protein GAFP-1; monocot | 1e-04 | |
| 3a0c_A | 110 | Mannose/sialic acid-binding lectin; beta-prism II, | 6e-12 | |
| 3a0c_A | 110 | Mannose/sialic acid-binding lectin; beta-prism II, | 1e-11 | |
| 3m7h_A | 276 | Putidacin L1; monocot mannose-binding lectin, bact | 2e-11 | |
| 3m7h_A | 276 | Putidacin L1; monocot mannose-binding lectin, bact | 7e-09 | |
| 3dzw_A | 109 | Agglutinin; lectin, mannobiose, mannose-alpha1, 3- | 7e-11 | |
| 3dzw_A | 109 | Agglutinin; lectin, mannobiose, mannose-alpha1, 3- | 4e-09 | |
| 3r0e_B | 110 | Lectin; carbohydrate binding, carbohydrate, sugar | 1e-10 | |
| 3r0e_B | 110 | Lectin; carbohydrate binding, carbohydrate, sugar | 3e-10 | |
| 1dlp_A | 236 | Lectin scafet precursor; two-domain lectin, beta p | 1e-10 | |
| 1dlp_A | 236 | Lectin scafet precursor; two-domain lectin, beta p | 4e-08 | |
| 2dpf_A | 115 | Curculin; sweet taste, taste modifying, plant prot | 3e-10 | |
| 2dpf_A | 115 | Curculin; sweet taste, taste modifying, plant prot | 3e-10 | |
| 3mez_B | 113 | Mannose-specific lectin 3 chain 2; heterotetramer, | 9e-10 | |
| 3mez_B | 113 | Mannose-specific lectin 3 chain 2; heterotetramer, | 1e-09 | |
| 3r0e_A | 109 | Lectin; carbohydrate binding, carbohydrate, sugar | 1e-09 | |
| 3r0e_A | 109 | Lectin; carbohydrate binding, carbohydrate, sugar | 7e-09 | |
| 3mez_A | 111 | Mannose-specific lectin 3 chain 1; heterotetramer, | 1e-06 | |
| 3mez_A | 111 | Mannose-specific lectin 3 chain 1; heterotetramer, | 2e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 |
| >1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 2e-15
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 44 QVVWSANRNNLVRINATLELTSDGNLVLQDADGAIAWSTNTSGKS-VVGLNLTDMGNLVL 102
VW++N L + L SDGN V+ DA+G W++++ + L L + GN+V+
Sbjct: 38 TSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVI 97
Query: 103 FDKNNAAVWQSFDH 116
+ + +W + +
Sbjct: 98 YG---SDIWSTGTY 108
|
| >1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 | Back alignment and structure |
|---|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 | Back alignment and structure |
|---|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 | Back alignment and structure |
|---|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 | Back alignment and structure |
|---|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 | Back alignment and structure |
|---|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 | Back alignment and structure |
|---|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 | Back alignment and structure |
|---|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 | Back alignment and structure |
|---|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 | Back alignment and structure |
|---|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 | Back alignment and structure |
|---|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 | Back alignment and structure |
|---|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 | Back alignment and structure |
|---|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 | Back alignment and structure |
|---|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 | Back alignment and structure |
|---|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 | Back alignment and structure |
|---|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 | Back alignment and structure |
|---|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 | Back alignment and structure |
|---|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 | Back alignment and structure |
|---|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 | Back alignment and structure |
|---|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109 | Back alignment and structure |
|---|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109 | Back alignment and structure |
|---|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111 | Back alignment and structure |
|---|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 422 | |||
| 3m7h_A | 276 | Putidacin L1; monocot mannose-binding lectin, bact | 100.0 | |
| 1dlp_A | 236 | Lectin scafet precursor; two-domain lectin, beta p | 99.97 | |
| 4h3o_A | 105 | Lectin; cadmium, plant protein; 2.17A {Allium sati | 99.73 | |
| 3a0c_A | 110 | Mannose/sialic acid-binding lectin; beta-prism II, | 99.69 | |
| 2dpf_A | 115 | Curculin; sweet taste, taste modifying, plant prot | 99.67 | |
| 1b2p_A | 119 | Protein (lectin); mannose-binding lectin, monocot, | 99.66 | |
| 3a0c_A | 110 | Mannose/sialic acid-binding lectin; beta-prism II, | 99.64 | |
| 1xd5_A | 112 | Gastrodianin-1, antifungal protein GAFP-1; monocot | 99.64 | |
| 1xd5_A | 112 | Gastrodianin-1, antifungal protein GAFP-1; monocot | 99.63 | |
| 1b2p_A | 119 | Protein (lectin); mannose-binding lectin, monocot, | 99.6 | |
| 3dzw_A | 109 | Agglutinin; lectin, mannobiose, mannose-alpha1, 3- | 99.56 | |
| 2dpf_A | 115 | Curculin; sweet taste, taste modifying, plant prot | 99.54 | |
| 3mez_B | 113 | Mannose-specific lectin 3 chain 2; heterotetramer, | 99.43 | |
| 3r0e_B | 110 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.36 | |
| 3mez_B | 113 | Mannose-specific lectin 3 chain 2; heterotetramer, | 99.31 | |
| 3r0e_A | 109 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.3 | |
| 3mez_A | 111 | Mannose-specific lectin 3 chain 1; heterotetramer, | 99.29 | |
| 3dzw_A | 109 | Agglutinin; lectin, mannobiose, mannose-alpha1, 3- | 99.2 | |
| 3mez_A | 111 | Mannose-specific lectin 3 chain 1; heterotetramer, | 99.17 | |
| 3r0e_B | 110 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.17 | |
| 3m7h_A | 276 | Putidacin L1; monocot mannose-binding lectin, bact | 99.07 | |
| 3r0e_A | 109 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.05 | |
| 4h3o_A | 105 | Lectin; cadmium, plant protein; 2.17A {Allium sati | 99.03 | |
| 1dlp_A | 236 | Lectin scafet precursor; two-domain lectin, beta p | 99.02 | |
| 2ll3_A | 82 | Micronemal protein 4; cell adhesion; NMR {Toxoplas | 89.05 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 86.29 |
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=302.86 Aligned_cols=195 Identities=21% Similarity=0.268 Sum_probs=147.5
Q ss_pred CCCCeEEEeeecCCCCCceEEEEEeeccccccccccccCCCCcEEEEcCCCCCCCC-----CcEEEEecCccEEE--EcC
Q 048192 2 TFGPTYACGFFCNGTCDSYLFAVFIVHAYDASLIEYQHTEFPQVVWSANRNNLVRI-----NATLELTSDGNLVL--QDA 74 (422)
Q Consensus 2 ~~~~~F~~GF~~~~~~~~~~l~Iw~~~~~~~~~~~~~~~~~~~vVW~ANr~~pv~~-----~~~L~l~~~G~LvL--~~~ 74 (422)
|++|+|+||||+++ + +|+ |. +.+ +||+|||++||.+ +++|+|+.||+|+| .|+
T Consensus 31 S~~g~F~lgf~~~~--~-~~l---y~-------------~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G~Lvl~~~~~ 90 (276)
T 3m7h_A 31 SPNQRFKLLLQGDG--N-LVI---QD-------------NGA-TVWVANEQQPFSSTIPLRNKKAPLAFYVQYGAFLDDY 90 (276)
T ss_dssp CTTSSEEEEECTTS--C-EEE---EE-------------TTE-EEEECSTTSTTEEEEECCCTTCCSEEEESSSEEEEEG
T ss_pred cCCCcEEEEEECCC--C-eEE---EC-------------CCC-eEEECCCCCCcCCcccccceEEEEeCCCcEEEEEeCC
Confidence 78999999999543 3 343 42 356 9999999999987 57899999999999 788
Q ss_pred CCCEEEeeCCCC------CceeEEEEecCCCeeEEcCCCcEEEeccCCCCCccCCCce----ecCCCeeeeecCCCCCCC
Q 048192 75 DGAIAWSTNTSG------KSVVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSLVPGQK----LLEGKKLTASVSTTNWTD 144 (422)
Q Consensus 75 ~~~~vWst~~~~------~~~~~~~LldsGNLVL~~~~~~~lWQSFd~PTDTlLpgq~----l~~~~~L~S~~s~~d~s~ 144 (422)
++.+||+|++.. ...+.|+|+|+|||||+| +.+|||| ||||||||||+ |..+++| ++.+||++
T Consensus 91 ~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~--~~~lWqS--~ptdtlLpg~~~~~~l~~g~~L---~S~~dps~ 163 (276)
T 3m7h_A 91 SRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD--SLALWNG--TPAIPLVPGAIDSLLLAPGSEL---VQGVVYGA 163 (276)
T ss_dssp GGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE--EEEEEES--CTTSCCCCSCTTCEEECSSEEE---CTTCEEEE
T ss_pred CCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC--CceeeCc--ccccccccccccccccccCccc---ccCCCCCC
Confidence 889999999865 346789999999999998 7899999 99999999999 8888888 45689999
Q ss_pred CCceEEEecCCCceEEEeccCCcceEEEeeccccccCcCcceeEe-cCceEEEeccCCCCCCceEEEcCCCCCCCeEEEE
Q 048192 145 GGLFSLSVSNKGLFAFIESNNTSIRYYELVKATKTSKEPSHARYL-NGSLAFFINSSEPREPDGAVPVPPASSSPGQYMR 223 (422)
Q Consensus 145 ~G~y~l~~~~~g~~~~~~~~~~~~~Yw~~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~s~~~~~~~~~~rl~ 223 (422)
|.|+++|+++|...++ ..+..+ ||+.+.+... ...+.+. +|.+.++.... .....+...... .+|++
T Consensus 164 -G~fsl~l~~dGnlvLy-~~~~~~-yW~Sgt~~~~---~~~l~l~~dGnLvl~d~~~----~~vWsS~t~~~~--~~rl~ 231 (276)
T 3m7h_A 164 -GASKLVFQGDGNLVAY-GPNGAA-TWNAGTQGKG---AVRAVFQGDGNLVVYGAGN----AVLWHSHTGGHA--SAVLR 231 (276)
T ss_dssp -TTEEEEECTTSCEEEE-CTTSSE-EEECCCTTTT---CCEEEECTTSCEEEECTTS----CEEEECSCTTCT--TCEEE
T ss_pred -ceEEEeecCCceEEEE-eCCCeE-EEECCCCCCc---cEEEEEcCCCeEEEEeCCC----cEEEEecCCCCC--CEEEE
Confidence 9999999999864432 333567 9995433221 1233333 45566554321 223333333222 57999
Q ss_pred EccCCcEEEEEE
Q 048192 224 LWPDGHLRVYEW 235 (422)
Q Consensus 224 Ld~dG~lr~y~w 235 (422)
|+.||+|++|.|
T Consensus 232 Ld~dGnLvly~~ 243 (276)
T 3m7h_A 232 LQANGSIAILDE 243 (276)
T ss_dssp ECTTSCEEEEEE
T ss_pred EcCCccEEEEcC
Confidence 999999999998
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 | Back alignment and structure |
|---|
| >4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* | Back alignment and structure |
|---|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* | Back alignment and structure |
|---|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* | Back alignment and structure |
|---|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 | Back alignment and structure |
|---|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* | Back alignment and structure |
|---|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A | Back alignment and structure |
|---|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A | Back alignment and structure |
|---|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 | Back alignment and structure |
|---|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* | Back alignment and structure |
|---|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* | Back alignment and structure |
|---|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* | Back alignment and structure |
|---|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* | Back alignment and structure |
|---|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
| >4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* | Back alignment and structure |
|---|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 | Back alignment and structure |
|---|
| >2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M* | Back alignment and structure |
|---|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 422 | ||||
| d1kj1a_ | 109 | b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium | 1e-17 | |
| d1kj1a_ | 109 | b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium | 9e-09 | |
| d1dlpa2 | 120 | b.78.1.1 (A:116-235) Fetuin-binding protein Scafet | 3e-15 | |
| d1dlpa2 | 120 | b.78.1.1 (A:116-235) Fetuin-binding protein Scafet | 7e-08 | |
| d1xd5a_ | 112 | b.78.1.1 (A:) Gastrodianin (antifungal protein) {G | 1e-13 | |
| d1dlpa1 | 115 | b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p | 3e-13 | |
| d1dlpa1 | 115 | b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p | 5e-06 | |
| d1b2pa_ | 119 | b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill | 3e-11 | |
| d1b2pa_ | 119 | b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill | 1e-10 | |
| d1jpca_ | 108 | b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan | 4e-11 | |
| d1jpca_ | 108 | b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan | 3e-07 |
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Garlic (Allium sativum) [TaxId: 4682]
Score = 75.8 bits (186), Expect = 1e-17
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 45 VVWSANRNNLVRINATLELTSDGNLVLQDADGAIAWSTNTS-GKSVVGLNLTDMGNLVLF 103
VW++N L + L SDGN V+ DA+G W++++ G L L + GN+V++
Sbjct: 39 SVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIY 98
Query: 104 DKNNAAVWQSFDH 116
+ +W + +
Sbjct: 99 G---SDIWSTGTY 108
|
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 | Back information, alignment and structure |
|---|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 | Back information, alignment and structure |
|---|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 | Back information, alignment and structure |
|---|
| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 | Back information, alignment and structure |
|---|
| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 | Back information, alignment and structure |
|---|
| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 | Back information, alignment and structure |
|---|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 | Back information, alignment and structure |
|---|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 | Back information, alignment and structure |
|---|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 | Back information, alignment and structure |
|---|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 422 | |||
| d1xd5a_ | 112 | Gastrodianin (antifungal protein) {Gastrodia elata | 99.72 | |
| d1kj1a_ | 109 | Lectin (agglutinin) {Garlic (Allium sativum) [TaxI | 99.72 | |
| d1jpca_ | 108 | Lectin (agglutinin) {Snowdrop (Galanthus nivalis) | 99.68 | |
| d1dlpa2 | 120 | Fetuin-binding protein Scafet precursor {Bluebell | 99.67 | |
| d1dlpa1 | 115 | Fetuin-binding protein Scafet precursor {Bluebell | 99.63 | |
| d1b2pa_ | 119 | Lectin (agglutinin) {Bluebell (Scilla campanulata) | 99.45 | |
| d1dlpa1 | 115 | Fetuin-binding protein Scafet precursor {Bluebell | 99.1 | |
| d1b2pa_ | 119 | Lectin (agglutinin) {Bluebell (Scilla campanulata) | 99.06 | |
| d1jpca_ | 108 | Lectin (agglutinin) {Snowdrop (Galanthus nivalis) | 99.04 | |
| d1kj1a_ | 109 | Lectin (agglutinin) {Garlic (Allium sativum) [TaxI | 99.02 | |
| d1dlpa2 | 120 | Fetuin-binding protein Scafet precursor {Bluebell | 98.91 | |
| d1xd5a_ | 112 | Gastrodianin (antifungal protein) {Gastrodia elata | 98.73 | |
| d1emoa2 | 39 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 88.64 | |
| d2qj2a1 | 91 | Hepatocyte growth factor {Human (Homo sapiens) [Ta | 80.6 |
| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Gastrodianin (antifungal protein) species: Gastrodia elata [TaxId: 91201]
Probab=99.72 E-value=1.6e-17 Score=136.11 Aligned_cols=94 Identities=22% Similarity=0.418 Sum_probs=76.6
Q ss_pred CCeEEEeeecCCCCCceEEEEEeeccccccccccccCCCCcEEEEcCCCCCCCCCcEEEEecCccEEEEcCCCCEEEeeC
Q 048192 4 GPTYACGFFCNGTCDSYLFAVFIVHAYDASLIEYQHTEFPQVVWSANRNNLVRINATLELTSDGNLVLQDADGAIAWSTN 83 (422)
Q Consensus 4 ~~~F~~GF~~~~~~~~~~l~Iw~~~~~~~~~~~~~~~~~~~vVW~ANr~~pv~~~~~L~l~~~G~LvL~~~~~~~vWst~ 83 (422)
+|.|+|.|...|+ |.|+. ..++||.||++.|. ..+.|+|+.||+|+|.+. +.++|+++
T Consensus 18 ~g~~~l~~q~DGN-----Lvly~---------------~~~~vW~s~~~~~~-~~~~l~l~~dGnLvl~~~-~~~~w~s~ 75 (112)
T d1xd5a_ 18 EGGYLFIIQNDCN-----LVLYD---------------NNRAVWASGTNGKA-SGCVLKMQNDGNLVIYSG-SRAIWASN 75 (112)
T ss_dssp ETTEEEEECTTSC-----EEEEE---------------TTEEEEECCCTTSC-SSEEEEECTTSCEEEEET-TEEEEECC
T ss_pred ECCEEEEEcCCCC-----EEEEc---------------CCcEEEEccCccCC-CCcEEEEeccccEEEEec-CCeEEEEe
Confidence 5789999998774 34442 35789999999774 346899999999999996 56788877
Q ss_pred CCCC-ceeEEEEecCCCeeEEcCCCcEEEeccCCCCC
Q 048192 84 TSGK-SVVGLNLTDMGNLVLFDKNNAAVWQSFDHPTD 119 (422)
Q Consensus 84 ~~~~-~~~~~~LldsGNLVL~~~~~~~lWQSFd~PTD 119 (422)
+... +...|+|+|+|||||++.++.++|||+.||+|
T Consensus 76 t~~~~~~~~l~L~ddGNlvly~~~~~~~W~S~t~~~n 112 (112)
T d1xd5a_ 76 TNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNVGN 112 (112)
T ss_dssp CCCSCCCCEEEECTTSCEEEECTTSCEEEECCCCCCC
T ss_pred eccCCCceEEEEcCCCCEEEECCCCcEEecCCCccCC
Confidence 6543 55688999999999999999999999999986
|
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} | Back information, alignment and structure |
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| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} | Back information, alignment and structure |
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| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
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| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
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| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
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| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} | Back information, alignment and structure |
|---|
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} | Back information, alignment and structure |
|---|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
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| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} | Back information, alignment and structure |
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| >d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2qj2a1 g.10.1.1 (A:36-126) Hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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