Citrus Sinensis ID: 048199
Local Sequence Feature Prediction
| Prediction and Method | Result |
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Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| E3 ubiquitin-protein ligase COP1 | E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors such as HY5, HYH and LAF1. Down-regulates MYB21, probably via ubiquitination process. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways. | probable | P43254 |
| E3 ubiquitin-protein ligase COP1 | E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways. | probable | P93471 |
Prediction of Enzyme Commission Number
No confident prediction of EC number!
Spatial Structural Prediction
Structural Models Based on Templates
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Template: 3SFZ, chain A Confidence level:very confident Coverage over the Query: 339-495 View the alignment between query and template View the model in PyMOL |
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Template: 4A11, chain B Confidence level:very confident Coverage over the Query: 325-495 View the alignment between query and template View the model in PyMOL |
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Template: 3HCT, chain A Confidence level:very confident Coverage over the Query: 45-118 View the alignment between query and template View the model in PyMOL |
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Template: 1GMJ, chain A Confidence level:probable Coverage over the Query: 172-211 View the alignment between query and template View the model in PyMOL |