Citrus Sinensis ID: 048219

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180---
Protein Sequence
MPVKYKIDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARSD
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEHHHHHHHHccHHHHcccccccEEEEEEEccccEEEEEEccccHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccEEEEEEccccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccEEccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEEcHHHHHHHHcccHccccccccccEEccEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEccccEEEEEEEcccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHcHEEEccccccHHcHccHHEEcccccc
Coil and Loop (DISEMBL)
mpvkykidsnystlttpfsfSYAELKKITDgfkekvgrgssgtvykgaMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNaekqpnwieRTGIARDIARGILYLHdecetqiihcdikpqnilmdENRCAKNFRLWIGkvdearsd
Flexible Loop (DISEMBL)
mpvkykidsnystlttpfsfsyAELKKITdgfkekvgrgssgtvykgaminrqLVAVNRLEKVLDEREREFQTeikvigrthhrnlvRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFrlwigkvdearsd
Low Complexity Region (SEG)
MPVKYKIDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARSD
Disordered region (IsUnstruct)
********SNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV******
Disordered Region (DISOPRED)
****Y********LTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE****
Disordered Region (DISEMBL)
MPVKYKIDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARSD
Disordered Region (DISPRO)
******I**NY*TLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPVKYKIDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMxxxxxxxxxxxxxxxxxxxxxFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARSD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	183	2.2.26 [Sep-21-2011]
Q9FLV4	872	G-type lectin S-receptor-	yes	no	0.836	0.175	0.506	2e-40
Q39202	832	G-type lectin S-receptor-	no	no	0.781	0.171	0.513	8e-38
Q9XID3	829	G-type lectin S-receptor-	no	no	0.825	0.182	0.487	9e-38
O64477	828	G-type lectin S-receptor-	no	no	0.814	0.179	0.487	2e-34
P17801	817	Putative receptor protein	N/A	no	0.863	0.193	0.469	2e-33
O65468	676	Cysteine-rich receptor-li	no	no	0.781	0.211	0.489	2e-31
Q9C5S9	674	Cysteine-rich receptor-li	no	no	0.781	0.212	0.489	4e-31
Q8RWZ5	821	G-type lectin S-receptor-	no	no	0.825	0.183	0.4	6e-31
Q9LFV3	436	Probable leucine-rich rep	no	no	0.814	0.341	0.443	6e-31
C0LGI2	929	Probable LRR receptor-lik	no	no	0.825	0.162	0.464	1e-30

>sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1

 Score =  164 bits (416), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/156 (50%), Positives = 103/156 (66%), Gaps = 3/156 (1%)

Query: 16  TPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEI 75
           +P SF+Y +L+  T+ F + +G G  GTVYKG +    LVAV RL++ L   EREF TE+
Sbjct: 516 SPVSFTYRDLQNCTNNFSQLLGSGGFGTVYKGTVAGETLVAVKRLDRALSHGEREFITEV 575

Query: 76  KVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN---WIERTGIAR 132
             IG  HH NLVRL GY  E S ++LVYEYM NGSL   +F++E+  N   W  R  IA 
Sbjct: 576 NTIGSMHHMNLVRLCGYCSEDSHRLLVYEYMINGSLDKWIFSSEQTANLLDWRTRFEIAV 635

Query: 133 DIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             A+GI Y H++C  +IIHCDIKP+NIL+D+N C K
Sbjct: 636 ATAQGIAYFHEQCRNRIIHCDIKPENILLDDNFCPK 671

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2

 Score =  156 bits (394), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 76/148 (51%), Positives = 106/148 (71%), Gaps = 5/148 (3%)

Query: 20  FSYAELKKITDGFKEKVGRGSSGTVYKG----AMINRQLVAVNRLEKVLDEREREFQTEI 75
           F+Y EL + T  F E++GRG+ G VYKG    A  +   VAV +L+++  + E+EF+ E+
Sbjct: 521 FTYGELAEATRDFTEELGRGAFGIVYKGYLEVAGGSEVTVAVKKLDRLDLDNEKEFKNEV 580

Query: 76  KVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIA 135
           KVIG+ HH+NLVRL+G+  E   +++VYE++  G+LA+ LF    +P+W +R  IA  IA
Sbjct: 581 KVIGQIHHKNLVRLIGFCNEGQSQMIVYEFLPQGTLANFLFR-RPRPSWEDRKNIAVAIA 639

Query: 136 RGILYLHDECETQIIHCDIKPQNILMDE 163
           RGILYLH+EC  QIIHCDIKPQNIL+DE
Sbjct: 640 RGILYLHEECSEQIIHCDIKPQNILLDE 667

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana GN=At1g34300 PE=1 SV=1

 Score =  156 bits (394), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 75/154 (48%), Positives = 105/154 (68%), Gaps = 3/154 (1%)

Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIK 76
           P  F+Y EL++ T  FKEK+G G  GTVY+G + NR +VAV +LE + ++ E++F+ E+ 
Sbjct: 471 PVQFTYKELQRCTKSFKEKLGAGGFGTVYRGVLTNRTVVAVKQLEGI-EQGEKQFRMEVA 529

Query: 77  VIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILF--NAEKQPNWIERTGIARDI 134
            I  THH NLVRL+G+  +   ++LVYE+M NGSL + LF  ++ K   W  R  IA   
Sbjct: 530 TISSTHHLNLVRLIGFCSQGRHRLLVYEFMRNGSLDNFLFTTDSAKFLTWEYRFNIALGT 589

Query: 135 ARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           A+GI YLH+EC   I+HCDIKP+NIL+D+N  AK
Sbjct: 590 AKGITYLHEECRDCIVHCDIKPENILVDDNFAAK 623

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1

 Score =  145 bits (365), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/154 (48%), Positives = 98/154 (63%), Gaps = 5/154 (3%)

Query: 19  SFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVI 78
           +FSY EL+  T  F +K+G G  G+V+KGA+ +   +AV RLE +  + E++F+TE+  I
Sbjct: 482 AFSYRELQNATKNFSDKLGGGGFGSVFKGALPDSSDIAVKRLEGI-SQGEKQFRTEVVTI 540

Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP----NWIERTGIARDI 134
           G   H NLVRL G+  E SKK+LVY+YM NGSL   LF  + +      W  R  IA   
Sbjct: 541 GTIQHVNLVRLRGFCSEGSKKLLVYDYMPNGSLDSHLFLNQVEEKIVLGWKLRFQIALGT 600

Query: 135 ARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           ARG+ YLHDEC   IIHCDIKP+NIL+D   C K
Sbjct: 601 ARGLAYLHDECRDCIIHCDIKPENILLDSQFCPK 634

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2

 Score =  141 bits (356), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/162 (46%), Positives = 106/162 (65%), Gaps = 4/162 (2%)

Query: 5   YKIDSNYSTLTTPFS-FSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKV 63
           +  +  Y  +T+ F  +SY EL K T  FK ++GRG SGTVYKG + + + VAV +LE V
Sbjct: 508 WASEKGYKAMTSNFRRYSYRELVKATRKFKVELGRGESGTVYKGVLEDDRHVAVKKLENV 567

Query: 64  LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQ-- 121
              +E  FQ E+ VIGR +H NLVR+ G+  E S ++LV EY+ NGSLA+ILF+      
Sbjct: 568 RQGKE-VFQAELSVIGRINHMNLVRIWGFCSEGSHRLLVSEYVENGSLANILFSEGGNIL 626

Query: 122 PNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE 163
            +W  R  IA  +A+G+ YLH EC   +IHCD+KP+NIL+D+
Sbjct: 627 LDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQ 668

Probable receptor. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain.

Zea mays (taxid: 4577)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O65468|CRK8_ARATH Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2

 Score =  135 bits (339), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/147 (48%), Positives = 95/147 (64%), Gaps = 4/147 (2%)

Query: 22  YAELKKITDGFKE--KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIG 79
           Y  ++  T+ F E  K+GRG  G VYKG   N + VAV RL K   + E EF+TE+ V+ 
Sbjct: 343 YRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVA 402

Query: 80  RTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NWIERTGIARDIARG 137
           +  HRNLVRLLG+SL+  ++ILVYEYM N SL  +LF+  KQ   +W++R  I   IARG
Sbjct: 403 KLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARG 462

Query: 138 ILYLHDECETQIIHCDIKPQNILMDEN 164
           ILYLH +    IIH D+K  NIL+D +
Sbjct: 463 ILYLHQDSRLTIIHRDLKASNILLDAD 489

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9C5S9|CRK6_ARATH Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1

 Score =  134 bits (337), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 72/147 (48%), Positives = 95/147 (64%), Gaps = 4/147 (2%)

Query: 22  YAELKKITDGFKE--KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIG 79
           Y  ++  T+ F E  K+GRG  G VYKG   N + VAV RL K   + E EF+TE+ V+ 
Sbjct: 341 YRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVA 400

Query: 80  RTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEK--QPNWIERTGIARDIARG 137
           +  HRNLVRLLG+SL+  ++ILVYEYM N SL  +LF+  K  Q +W++R  I   IARG
Sbjct: 401 KLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQIQLDWMQRYNIIGGIARG 460

Query: 138 ILYLHDECETQIIHCDIKPQNILMDEN 164
           ILYLH +    IIH D+K  NIL+D +
Sbjct: 461 ILYLHQDSRLTIIHRDLKASNILLDAD 487

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1

 Score =  133 bits (335), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 102/155 (65%), Gaps = 4/155 (2%)

Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIK 76
           P  F+Y +L+  T+ F  K+G+G  G+VY+G + +   +AV +LE +  + ++EF+ E+ 
Sbjct: 480 PIRFAYKDLQSATNNFSVKLGQGGFGSVYEGTLPDGSRLAVKKLEGI-GQGKKEFRAEVS 538

Query: 77  VIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILF---NAEKQPNWIERTGIARD 133
           +IG  HH +LVRL G+  E + ++L YE++S GSL   +F   + +   +W  R  IA  
Sbjct: 539 IIGSIHHLHLVRLRGFCAEGAHRLLAYEFLSKGSLERWIFRKKDGDVLLDWDTRFNIALG 598

Query: 134 IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            A+G+ YLH++C+ +I+HCDIKP+NIL+D+N  AK
Sbjct: 599 TAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAK 633

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LFV3|Y5157_ARATH Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730 OS=Arabidopsis thaliana GN=At5g15730 PE=2 SV=1

 Score =  133 bits (335), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 67/151 (44%), Positives = 95/151 (62%), Gaps = 2/151 (1%)

Query: 20  FSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIG 79
           ++Y +++K T  F   +G+GS G VYK  M N +L A         + +REFQTE+ ++G
Sbjct: 104 YNYKDIQKATQNFTTVLGQGSFGPVYKAVMPNGELAAAKVHGSNSSQGDREFQTEVSLLG 163

Query: 80  RTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NWIERTGIARDIARG 137
           R HHRNLV L GY ++ S ++L+YE+MSNGSL ++L+  E     NW ER  IA DI+ G
Sbjct: 164 RLHHRNLVNLTGYCVDKSHRMLIYEFMSNGSLENLLYGGEGMQVLNWEERLQIALDISHG 223

Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           I YLH+     +IH D+K  NIL+D +  AK
Sbjct: 224 IEYLHEGAVPPVIHRDLKSANILLDHSMRAK 254

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGI2|Y1677_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1

 Score =  132 bits (333), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/153 (46%), Positives = 93/153 (60%), Gaps = 2/153 (1%)

Query: 18  FSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKV 77
           +  S   L++ TD F +KVGRGS G+VY G M + + VAV           R+F TE+ +
Sbjct: 594 YFISLPVLEEATDNFSKKVGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVAL 653

Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAE--KQPNWIERTGIARDIA 135
           + R HHRNLV L+GY  E  ++ILVYEYM NGSL D L  +   K  +W+ R  IA+D A
Sbjct: 654 LSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAA 713

Query: 136 RGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           +G+ YLH  C   IIH D+K  NIL+D N  AK
Sbjct: 714 KGLEYLHTGCNPSIIHRDVKSSNILLDINMRAK 746

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
359477044	768	PREDICTED: G-type lectin S-receptor-like	0.819	0.195	0.728	3e-59
359477040	774	PREDICTED: G-type lectin S-receptor-like	0.819	0.193	0.721	1e-57
225431551	768	PREDICTED: G-type lectin S-receptor-like	0.819	0.195	0.695	5e-57
224078930	488	predicted protein [Populus trichocarpa]	0.890	0.334	0.672	7e-57
255582007	783	ATP binding protein, putative [Ricinus c	0.836	0.195	0.655	2e-54
255582003	817	ATP binding protein, putative [Ricinus c	0.836	0.187	0.662	2e-54
296088600	623	unnamed protein product [Vitis vinifera]	0.841	0.247	0.649	7e-53
225431567	762	PREDICTED: G-type lectin S-receptor-like	0.841	0.202	0.649	8e-53
359477046	798	PREDICTED: G-type lectin S-receptor-like	0.814	0.186	0.673	8e-53
147782422	762	hypothetical protein VITISV_038481 [Viti	0.841	0.202	0.649	9e-53

>gi|359477044|ref|XP_002275760.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  233 bits (594), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 110/151 (72%), Positives = 131/151 (86%), Gaps = 1/151 (0%)

Query: 19  SFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKV 77
           SF+Y EL+K+T+GFKE++G+G+SGTVYKGA+ N Q +VAV +LEKVL E +REFQ E+KV
Sbjct: 472 SFTYMELEKVTNGFKEEIGKGASGTVYKGAISNSQRIVAVKKLEKVLAEGQREFQNELKV 531

Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARG 137
           IGRTHHRNLVRLLGY LE   ++LVYEYMSNGSLAD+LF   KQP WIER GIA ++ARG
Sbjct: 532 IGRTHHRNLVRLLGYCLEGPNRLLVYEYMSNGSLADLLFTPGKQPCWIERMGIALNVARG 591

Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           +LYLH+ECETQIIHCDIKPQNILMDE + AK
Sbjct: 592 VLYLHEECETQIIHCDIKPQNILMDEYKRAK 622

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477040|ref|XP_002275651.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  227 bits (579), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 109/151 (72%), Positives = 126/151 (83%), Gaps = 1/151 (0%)

Query: 19  SFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKV 77
           SF+Y EL+K+T+GF E++G+G+SGTVYKGA  N Q +VAV +LEKVL E E EFQ E+KV
Sbjct: 478 SFTYMELEKVTNGFMEEIGKGASGTVYKGATSNGQRIVAVKKLEKVLAEGEIEFQNELKV 537

Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARG 137
           IGRTHHRNLVRLLGY L+   ++LVYEYMSNGSLAD LF   KQP W ER GIA ++ARG
Sbjct: 538 IGRTHHRNLVRLLGYCLDGPNRLLVYEYMSNGSLADWLFTPGKQPRWSERMGIALNVARG 597

Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           ILYLH+ECET IIHCDIKPQNILMDE RCAK
Sbjct: 598 ILYLHEECETCIIHCDIKPQNILMDEYRCAK 628

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431551|ref|XP_002275615.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  225 bits (574), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 105/151 (69%), Positives = 129/151 (85%), Gaps = 1/151 (0%)

Query: 19  SFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKV 77
           SF+Y EL+K+T+ FKE++G+G+SGTVYKGA+ N Q +VAV + EKVL E +REFQ E+KV
Sbjct: 472 SFTYMELEKVTNCFKEEIGKGASGTVYKGAISNGQRIVAVKKQEKVLAEWQREFQNELKV 531

Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARG 137
           +GRTHHRNLVRLLGY L+   ++LVYEYMSNGSLAD+LF   KQP W+ER  IA ++A+G
Sbjct: 532 LGRTHHRNLVRLLGYCLDGRNRLLVYEYMSNGSLADLLFTPAKQPCWVERVRIALNVAKG 591

Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           +LYLH+ECETQIIHCDIKPQNILMDE RCAK
Sbjct: 592 VLYLHEECETQIIHCDIKPQNILMDEYRCAK 622

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078930|ref|XP_002335729.1| predicted protein [Populus trichocarpa] gi|222834660|gb|EEE73123.1| predicted protein [Populus trichocarpa]

 Score =  225 bits (573), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 113/168 (67%), Positives = 137/168 (81%), Gaps = 5/168 (2%)

Query: 6   KIDSNYSTLT----TPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRL 60
           K+ SN ST       P +F+YAEL+ +T GFKE++GRGS GTVYKG +  N+++VAV RL
Sbjct: 175 KVPSNDSTGLNEEFAPRAFTYAELENVTGGFKEEIGRGSFGTVYKGIISSNQKVVAVKRL 234

Query: 61  EKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEK 120
           EKVL E EREFQ E+KVIG+THHRNLVRLLGY  +   ++LVYEYMSNGSLADILF+ EK
Sbjct: 235 EKVLAEGEREFQNEMKVIGKTHHRNLVRLLGYCHDGHHRLLVYEYMSNGSLADILFSLEK 294

Query: 121 QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           +P + ER  IAR+IARGI+YLH+ECETQIIHCDIKPQNIL+DE+RC K
Sbjct: 295 RPCFPERLEIARNIARGIVYLHEECETQIIHCDIKPQNILIDESRCPK 342

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582007|ref|XP_002531801.1| ATP binding protein, putative [Ricinus communis] gi|223528567|gb|EEF30589.1| ATP binding protein, putative [Ricinus communis]

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 101/154 (65%), Positives = 127/154 (82%), Gaps = 1/154 (0%)

Query: 16  TPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTE 74
            P SF+YAEL+++TDGFKE++GRGS GTVYKG +   Q +VAV +LE+VL + +REFQTE
Sbjct: 483 APLSFTYAELERVTDGFKEEIGRGSFGTVYKGLLSRSQKVVAVKKLERVLADGDREFQTE 542

Query: 75  IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDI 134
           +K IG+THH+NLVRLLGY  E   ++LVYE+MSNGSL+D+LF+ E +P + ER  IAR+I
Sbjct: 543 MKAIGKTHHKNLVRLLGYCNEGPNRLLVYEFMSNGSLSDVLFSPENRPCFAERIEIARNI 602

Query: 135 ARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           ARGILYLH+ECETQIIHCDIKP+NILMD   C K
Sbjct: 603 ARGILYLHEECETQIIHCDIKPENILMDAYMCPK 636

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582003|ref|XP_002531799.1| ATP binding protein, putative [Ricinus communis] gi|223528565|gb|EEF30587.1| ATP binding protein, putative [Ricinus communis]

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 102/154 (66%), Positives = 129/154 (83%), Gaps = 1/154 (0%)

Query: 16  TPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTE 74
            P SF+YAEL+++TDGFKE++GRGS GTVYKG + + Q +VAV +LE+VL + +REFQTE
Sbjct: 483 APLSFTYAELERVTDGFKEEIGRGSFGTVYKGLLSSSQKVVAVKKLERVLADGDREFQTE 542

Query: 75  IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDI 134
           +KVIG+THHRNLV LLGY  E   ++LVY++MSNGSL+D+LF+ EK+P + ER  IAR+I
Sbjct: 543 MKVIGKTHHRNLVCLLGYCNEGLNRLLVYDFMSNGSLSDVLFSPEKRPCFTERIEIARNI 602

Query: 135 ARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           ARGILYLH+ECETQIIHCDIKP+NILMD   C K
Sbjct: 603 ARGILYLHEECETQIIHCDIKPENILMDAYMCPK 636

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088600|emb|CBI37591.3| unnamed protein product [Vitis vinifera]

 Score =  211 bits (538), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 102/157 (64%), Positives = 126/157 (80%), Gaps = 3/157 (1%)

Query: 19  SFSYAELKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKV 77
           SFSY +L+K TDGF+E++GRG  G VYKG +    Q +AV RLEKV++E EREFQ E+ +
Sbjct: 256 SFSYNDLEKATDGFREELGRGPFGAVYKGTIAQGNQTIAVKRLEKVVEEGEREFQAEMTI 315

Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARG 137
           IGRTHHRNLVRLLG+ ++ SKK+LVYEYMSNGSLAD+LFN EK+P W ER  IA D+ARG
Sbjct: 316 IGRTHHRNLVRLLGFCMQGSKKLLVYEYMSNGSLADLLFNGEKRPIWRERVRIALDVARG 375

Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK--NFRL 172
           I YLH+ECE  IIH DIKP+NIL+D++  AK  +FRL
Sbjct: 376 IFYLHEECEVHIIHGDIKPKNILLDDSWTAKLSDFRL 412

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431567|ref|XP_002276274.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  211 bits (538), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 102/157 (64%), Positives = 126/157 (80%), Gaps = 3/157 (1%)

Query: 19  SFSYAELKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKV 77
           SFSY +L+K TDGF+E++GRG  G VYKG +    Q +AV RLEKV++E EREFQ E+ +
Sbjct: 466 SFSYNDLEKATDGFREELGRGPFGAVYKGTIAQGNQTIAVKRLEKVVEEGEREFQAEMTI 525

Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARG 137
           IGRTHHRNLVRLLG+ ++ SKK+LVYEYMSNGSLAD+LFN EK+P W ER  IA D+ARG
Sbjct: 526 IGRTHHRNLVRLLGFCMQGSKKLLVYEYMSNGSLADLLFNGEKRPIWRERVRIALDVARG 585

Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK--NFRL 172
           I YLH+ECE  IIH DIKP+NIL+D++  AK  +FRL
Sbjct: 586 IFYLHEECEVHIIHGDIKPKNILLDDSWTAKLSDFRL 622

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477046|ref|XP_002275786.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]

 Score =  211 bits (538), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 101/150 (67%), Positives = 124/150 (82%), Gaps = 1/150 (0%)

Query: 20  FSYAELKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVI 78
           FSY EL + T GFKE++G+GS G VYKG +  +++LVAV RLEK+++E EREFQ E++ I
Sbjct: 504 FSYKELIRATSGFKEELGKGSFGAVYKGFLYKSKKLVAVKRLEKIVEEGEREFQAEMRAI 563

Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
           GRTHHRNLVRL+GY  E S+++LVYEYMSNGSLA++LFNA  +P+W ER  IA D+ARGI
Sbjct: 564 GRTHHRNLVRLMGYCAENSRRLLVYEYMSNGSLANLLFNAGTRPHWNERVRIALDVARGI 623

Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
           LYLH+ECET IIHCDIKPQNILMDE   AK
Sbjct: 624 LYLHEECETPIIHCDIKPQNILMDEFLNAK 653

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147782422|emb|CAN72833.1| hypothetical protein VITISV_038481 [Vitis vinifera]

 Score =  211 bits (537), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 102/157 (64%), Positives = 126/157 (80%), Gaps = 3/157 (1%)

Query: 19  SFSYAELKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKV 77
           SFSY +L+K TDGF+E++GRG  G VYKG +    Q +AV RLEKV++E EREFQ E+ +
Sbjct: 466 SFSYNDLEKATDGFREELGRGPFGAVYKGTIAQGNQTIAVKRLEKVVEEGEREFQAEMTI 525

Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARG 137
           IGRTHHRNLVRLLG+ ++ SKK+LVYEYMSNGSLAD+LFN EK+P W ER  IA D+ARG
Sbjct: 526 IGRTHHRNLVRLLGFCMQGSKKLLVYEYMSNGSLADLLFNGEKRPIWRERVRIALDVARG 585

Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK--NFRL 172
           I YLH+ECE  IIH DIKP+NIL+D++  AK  +FRL
Sbjct: 586 IFYLHEECEVHIIHGDIKPKNILLDDSWTAKLSDFRL 622

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
TAIR|locus:2026155	829	AT1G34300 [Arabidopsis thalian	0.879	0.194	0.464	4e-35
TAIR|locus:2059103	828	AT2G19130 [Arabidopsis thalian	0.814	0.179	0.493	1.4e-31
TAIR|locus:2172149	440	CRLK1 "calcium/calmodulin-regu	0.874	0.363	0.434	8.8e-31
TAIR|locus:2143166	436	CRLK2 "calcium/calmodulin-regu	0.814	0.341	0.443	3e-30
TAIR|locus:2090634	663	AT3G19300 [Arabidopsis thalian	0.814	0.224	0.453	1.5e-29
TAIR|locus:2121651	676	CRK8 "cysteine-rich RLK (RECEP	0.770	0.208	0.496	2e-29
TAIR|locus:2084016	937	AT3G53590 [Arabidopsis thalian	0.781	0.152	0.465	4.9e-29
TAIR|locus:2008565	929	AT1G67720 [Arabidopsis thalian	0.825	0.162	0.464	7e-29
TAIR|locus:2116525	821	SD2-5 "S-domain-2 5" [Arabidop	0.825	0.183	0.4	1.1e-28
TAIR|locus:2157042	953	AT5G49760 [Arabidopsis thalian	0.890	0.171	0.426	1.2e-28

TAIR|locus:2026155 AT1G34300 [Arabidopsis thaliana (taxid:3702)]

 Score = 389 (142.0 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 78/168 (46%), Positives = 110/168 (65%)

Query:     7 IDSNYSTLT----TPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEK 62
             + S+Y+ L      P  F+Y EL++ T  FKEK+G G  GTVY+G + NR +VAV +LE 
Sbjct:   457 LSSHYTLLEYASGAPVQFTYKELQRCTKSFKEKLGAGGFGTVYRGVLTNRTVVAVKQLEG 516

Query:    63 VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAE--K 120
             + ++ E++F+ E+  I  THH NLVRL+G+  +   ++LVYE+M NGSL + LF  +  K
Sbjct:   517 I-EQGEKQFRMEVATISSTHHLNLVRLIGFCSQGRHRLLVYEFMRNGSLDNFLFTTDSAK 575

Query:   121 QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
                W  R  IA   A+GI YLH+EC   I+HCDIKP+NIL+D+N  AK
Sbjct:   576 FLTWEYRFNIALGTAKGITYLHEECRDCIVHCDIKPENILVDDNFAAK 623

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)]

 Score = 356 (130.4 bits), Expect = 1.4e-31, P = 1.4e-31
 Identities = 76/154 (49%), Positives = 99/154 (64%)

Query:    19 SFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVI 78
             +FSY EL+  T  F +K+G G  G+V+KGA+ +   +AV RLE +  + E++F+TE+  I
Sbjct:   482 AFSYRELQNATKNFSDKLGGGGFGSVFKGALPDSSDIAVKRLEGI-SQGEKQFRTEVVTI 540

Query:    79 GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILF-NAEKQP---NWIERTGIARDI 134
             G   H NLVRL G+  E SKK+LVY+YM NGSL   LF N  ++     W  R  IA   
Sbjct:   541 GTIQHVNLVRLRGFCSEGSKKLLVYDYMPNGSLDSHLFLNQVEEKIVLGWKLRFQIALGT 600

Query:   135 ARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             ARG+ YLHDEC   IIHCDIKP+NIL+D   C K
Sbjct:   601 ARGLAYLHDECRDCIIHCDIKPENILLDSQFCPK 634

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2172149 CRLK1 "calcium/calmodulin-regulated receptor-like kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 70/161 (43%), Positives = 101/161 (62%)

Query:     9 SNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERE 68
             SN  + +    +SY +L+K T  F   +G+G+ G VYK  M   ++VAV  L     + E
Sbjct:    92 SNVISASGILEYSYRDLQKATCNFTTLIGQGAFGPVYKAQMSTGEIVAVKVLATDSKQGE 151

Query:    69 REFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIER 127
             +EFQTE+ ++GR HHRNLV L+GY  E  + +L+Y YMS GSLA  L++ + +P +W  R
Sbjct:   152 KEFQTEVMLLGRLHHRNLVNLIGYCAEKGQHMLIYVYMSKGSLASHLYSEKHEPLSWDLR 211

Query:   128 TGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
               IA D+ARG+ YLHD     +IH DIK  NIL+D++  A+
Sbjct:   212 VYIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRAR 252

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:2143166 CRLK2 "calcium/calmodulin-regulated receptor-like kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 67/151 (44%), Positives = 95/151 (62%)

Query:    20 FSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIG 79
             ++Y +++K T  F   +G+GS G VYK  M N +L A         + +REFQTE+ ++G
Sbjct:   104 YNYKDIQKATQNFTTVLGQGSFGPVYKAVMPNGELAAAKVHGSNSSQGDREFQTEVSLLG 163

Query:    80 RTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NWIERTGIARDIARG 137
             R HHRNLV L GY ++ S ++L+YE+MSNGSL ++L+  E     NW ER  IA DI+ G
Sbjct:   164 RLHHRNLVNLTGYCVDKSHRMLIYEFMSNGSLENLLYGGEGMQVLNWEERLQIALDISHG 223

Query:   138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             I YLH+     +IH D+K  NIL+D +  AK
Sbjct:   224 IEYLHEGAVPPVIHRDLKSANILLDHSMRAK 254

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2090634 AT3G19300 [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 1.5e-29, P = 1.5e-29
 Identities = 68/150 (45%), Positives = 94/150 (62%)

Query:    20 FSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIG 79
             FSY E++K T+ F   +GRG  GTVYK    N  + AV ++ K  ++ E EF  EI+++ 
Sbjct:   316 FSYKEIRKATEDFNAVIGRGGFGTVYKAEFSNGLVAAVKKMNKSSEQAEDEFCREIELLA 375

Query:    80 RTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGI 138
             R HHR+LV L G+  + +++ LVYEYM NGSL D L + EK P +W  R  IA D+A  +
Sbjct:   376 RLHHRHLVALKGFCNKKNERFLVYEYMENGSLKDHLHSTEKSPLSWESRMKIAIDVANAL 435

Query:   139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
              YLH  C+  + H DIK  NIL+DE+  AK
Sbjct:   436 EYLHFYCDPPLCHRDIKSSNILLDEHFVAK 465

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2121651 CRK8 "cysteine-rich RLK (RECEPTOR-like protein kinase) 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 2.0e-29, P = 2.0e-29
 Identities = 72/145 (49%), Positives = 94/145 (64%)

Query:    22 YAELKKITDGFKE--KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIG 79
             Y  ++  T+ F E  K+GRG  G VYKG   N + VAV RL K   + E EF+TE+ V+ 
Sbjct:   343 YRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVA 402

Query:    80 RTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NWIERTGIARDIARG 137
             +  HRNLVRLLG+SL+  ++ILVYEYM N SL  +LF+  KQ   +W++R  I   IARG
Sbjct:   403 KLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARG 462

Query:   138 ILYLHDECETQIIHCDIKPQNILMD 162
             ILYLH +    IIH D+K  NIL+D
Sbjct:   463 ILYLHQDSRLTIIHRDLKASNILLD 487

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2084016 AT3G53590 [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 4.9e-29, Sum P(2) = 4.9e-29
 Identities = 68/146 (46%), Positives = 94/146 (64%)

Query:    20 FSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKV 77
             FS+ EL   T+GF     +GRGS G VYKG + N+  VA+ R E+   + E+EF  EI +
Sbjct:   602 FSFVELSDATNGFDSSTLIGRGSYGKVYKGILSNKTEVAIKRGEETSLQSEKEFLNEIDL 661

Query:    78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILF-NAEKQPNWIERTGIARDIAR 136
             + R HHRNLV L+GYS ++ +++LVYEYM NG++ D L  NA    ++  R+ +A   A+
Sbjct:   662 LSRLHHRNLVSLIGYSSDIGEQMLVYEYMPNGNVRDWLSANAADTLSFSMRSHVALGSAK 721

Query:   137 GILYLHDECETQIIHCDIKPQNILMD 162
             GILYLH E    +IH DIK  NIL+D
Sbjct:   722 GILYLHTEANPPVIHRDIKTSNILLD 747

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2008565 AT1G67720 [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 7.0e-29, P = 7.0e-29
 Identities = 71/153 (46%), Positives = 96/153 (62%)

Query:    18 FSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKV 77
             +  S   L++ TD F +KVGRGS G+VY G M + + VAV           R+F TE+ +
Sbjct:   594 YFISLPVLEEATDNFSKKVGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVAL 653

Query:    78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILF-NAEKQP-NWIERTGIARDIA 135
             + R HHRNLV L+GY  E  ++ILVYEYM NGSL D L  +++ +P +W+ R  IA+D A
Sbjct:   654 LSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAA 713

Query:   136 RGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             +G+ YLH  C   IIH D+K  NIL+D N  AK
Sbjct:   714 KGLEYLHTGCNPSIIHRDVKSSNILLDINMRAK 746

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0007267 "cell-cell signaling" evidence=RCA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010267 "production of ta-siRNAs involved in RNA interference" evidence=RCA

GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=RCA

TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 1.1e-28, P = 1.1e-28
 Identities = 62/155 (40%), Positives = 101/155 (65%)

Query:    17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIK 76
             P  F+Y +L+  T+ F  K+G+G  G+VY+G + +   +AV +LE +  + ++EF+ E+ 
Sbjct:   480 PIRFAYKDLQSATNNFSVKLGQGGFGSVYEGTLPDGSRLAVKKLEGI-GQGKKEFRAEVS 538

Query:    77 VIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP---NWIERTGIARD 133
             +IG  HH +LVRL G+  E + ++L YE++S GSL   +F  +      +W  R  IA  
Sbjct:   539 IIGSIHHLHLVRLRGFCAEGAHRLLAYEFLSKGSLERWIFRKKDGDVLLDWDTRFNIALG 598

Query:   134 IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
              A+G+ YLH++C+ +I+HCDIKP+NIL+D+N  AK
Sbjct:   599 TAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAK 633

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

TAIR|locus:2157042 AT5G49760 [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 73/171 (42%), Positives = 107/171 (62%)

Query:     6 KIDSNYSTLTTPF-----SFSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVN 58
             K D++ S++  P      +F++ ELKK TD F E   VG G  G VY+G + N QL+A+ 
Sbjct:   600 KWDTSKSSIDAPQLMGAKAFTFEELKKCTDNFSEANDVGGGGYGKVYRGILPNGQLIAIK 659

Query:    59 RLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNA 118
             R ++   +   EF+TEI+++ R HH+N+VRLLG+  + ++++LVYEY+SNGSL D L   
Sbjct:   660 RAQQGSLQGGLEFKTEIELLSRVHHKNVVRLLGFCFDRNEQMLVYEYISNGSLKDSLSGK 719

Query:   119 EK-QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
                + +W  R  IA    +G+ YLH+  +  IIH DIK  NIL+DEN  AK
Sbjct:   720 SGIRLDWTRRLKIALGSGKGLAYLHELADPPIIHRDIKSNNILLDENLTAK 770

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0044242 "cellular lipid catabolic process" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	183
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-29
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-27
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-27
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-27
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-25
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-25
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	6e-25
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	6e-22
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-20
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	9e-19
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-17
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-17
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	9e-17
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-16
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-16
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	8e-16
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-15
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	3e-15
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	3e-15
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	8e-15
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-14
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-14
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-14
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-14
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-14
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	3e-14
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	7e-14
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	8e-14
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	1e-13
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-13
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-13
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	3e-13
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	3e-13
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	5e-13
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	7e-13
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-12
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-12
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-12
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-12
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	6e-12
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	6e-12
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-11
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-11
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-11
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-11
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-11
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-11
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	4e-11
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	4e-11
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	8e-11
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	8e-11
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	9e-11
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-10
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-10
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-10
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-10
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	2e-10
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-10
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	3e-10
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-10
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	3e-10
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-10
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	4e-10
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	4e-10
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-09
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-09
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-09
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	2e-09
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-09
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-09
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	3e-09
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	3e-09
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	3e-09
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	4e-09
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	4e-09
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	5e-09
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	7e-09
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	8e-09
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	8e-09
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	9e-09
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-08
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	1e-08
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-08
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-08
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-08
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-08
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-08
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-08
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	2e-08
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-08
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-08
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	2e-08
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-08
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	2e-08
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-08
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-08
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	3e-08
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	4e-08
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	4e-08
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	4e-08
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	7e-08
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	8e-08
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	1e-07
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-07
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-07
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-07
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-07
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-07
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-07
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-07
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	3e-07
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	3e-07
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-07
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	3e-07
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	3e-07
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-07
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	4e-07
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	4e-07
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	4e-07
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	5e-07
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	5e-07
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	7e-07
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	7e-07
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	8e-07
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	1e-06
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-06
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-06
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-06
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	1e-06
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	2e-06
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-06
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-06
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-06
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	2e-06
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	3e-06
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-06
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-06
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	4e-06
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	5e-06
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	5e-06
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	6e-06
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	6e-06
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	7e-06
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	8e-06
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	9e-06
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	9e-06
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-05
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-05
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-05
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-05
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-05
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-05
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-05
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	3e-05
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	3e-05
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	3e-05
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	3e-05
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	4e-05
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	4e-05
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	5e-05
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	7e-05
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	7e-05
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	8e-05
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	1e-04
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	1e-04
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	1e-04
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-04
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-04
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-04
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-04
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-04
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-04
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-04
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	3e-04
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-04
PRK00485	464	PRK00485, fumC, fumarate hydratase; Reviewed	4e-04
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	4e-04
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	4e-04
PRK09605	535	PRK09605, PRK09605, bifunctional UGMP family prote	5e-04
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	5e-04
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	5e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	5e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	5e-04
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	6e-04
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	6e-04
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	6e-04
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	8e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	8e-04
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	9e-04
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	0.001
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	0.001
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	0.001
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	0.001
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	0.001
cd01362	455	cd01362, Fumarase_classII, Class II fumarases	0.001
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	0.002
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	0.002
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	0.002
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	0.002
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	0.002
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	0.002
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	0.002
COG0114	462	COG0114, FumC, Fumarase [Energy production and con	0.002
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	0.003
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.003
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	0.003
cd01596	450	cd01596, Aspartase_like, aspartase (L-aspartate am	0.003
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  106 bits (268), Expect = 3e-29
 Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 5/131 (3%)

Query: 36  VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLLGYS 93
           +G G  GTVY        + VA+  ++K       E    EI+++ + +H N+V+L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
            + +   LV EY   GSL D+L   E + +  E   I   I  G+ YLH      IIH D
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRD 117

Query: 154 IKPQNILMDEN 164
           +KP+NIL+D +
Sbjct: 118 LKPENILLDSD 128

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  103 bits (260), Expect = 1e-27
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 9/143 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMI-----NRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRN 85
             +K+G G+ G VYKG +       +  VAV  L++   E++  EF  E +++ +  H N
Sbjct: 3   LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           +V+LLG   E     +V EYM  G L   L     + +  +    A  IARG+ YL  + 
Sbjct: 63  VVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESK- 121

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
               IH D+  +N L+ EN   K
Sbjct: 122 --NFIHRDLAARNCLVGENLVVK 142

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  103 bits (259), Expect = 2e-27
 Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 10/144 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-----RQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRN 85
             +K+G G+ G VYKG +          VAV  L++   E++  EF  E +++ +  H N
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADIL-FNAEKQPNWIERTGIARDIARGILYLHDE 144
           +V+LLG   E    ++V EYM  G L D L  N  K+ +  +    A  IARG+ YL  +
Sbjct: 63  IVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK 122

Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
                IH D+  +N L+ EN   K
Sbjct: 123 ---NFIHRDLAARNCLVGENLVVK 143

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  101 bits (255), Expect = 6e-27
 Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRL 89
             EK+G GS G VY        +LVA+  ++K   +++RE    EIK++ +  H N+VRL
Sbjct: 3   ILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRL 62

Query: 90  LGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
                E   K+ LV EY   G L D+L    +      R    R I   + YLH +    
Sbjct: 63  YD-VFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARF-YLRQILSALEYLHSK---G 117

Query: 149 IIHCDIKPQNILMDENRCAK 168
           I+H D+KP+NIL+DE+   K
Sbjct: 118 IVHRDLKPENILLDEDGHVK 137

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 98.0 bits (245), Expect = 2e-25
 Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 9/143 (6%)

Query: 32  FKEKVGRGSSGTVYKG-----AMINRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRN 85
             +K+G G+ G VYKG            VAV  L++   E ER EF  E  ++ +  H N
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPN 62

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           +VRLLG   +     +V EYM  G L D L    ++    +   +A  IA+G+ YL  + 
Sbjct: 63  IVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESK- 121

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
               +H D+  +N L+ EN   K
Sbjct: 122 --NFVHRDLAARNCLVTENLVVK 142

Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 97.3 bits (243), Expect = 3e-25
 Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 7/136 (5%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVR 88
              K+G GS GTVYK       ++VAV  L+K     ++++  + EI+++ R  H N+VR
Sbjct: 3   LLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVR 62

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           L+    +     LV EY   G L D L       +  E   IA  I RG+ YLH      
Sbjct: 63  LIDAFEDKDHLYLVMEYCEGGDLFDYLSR-GGPLSEDEAKKIALQILRGLEYLHSN---G 118

Query: 149 IIHCDIKPQNILMDEN 164
           IIH D+KP+NIL+DEN
Sbjct: 119 IIHRDLKPENILLDEN 134

Length = 260

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 96.9 bits (242), Expect = 6e-25
 Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 13/142 (9%)

Query: 34  EKVGRGSSGTVYKGAMINR--QLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRL 89
           E +GRGS G+VY  A+     +L+AV    L    +E     + EI+++    H N+VR 
Sbjct: 6   ELLGRGSFGSVYL-ALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRY 64

Query: 90  LGYSLEVSKK-ILVY-EYMSNGSLADILFNAEK-QPNWIERTGIARDIARGILYLHDECE 146
            G   +  K  + ++ EY+S GSL+ +L    K     I +    R I  G+ YLH    
Sbjct: 65  YGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRK--YTRQILEGLAYLHSN-- 120

Query: 147 TQIIHCDIKPQNILMDENRCAK 168
             I+H DIK  NIL+D +   K
Sbjct: 121 -GIVHRDIKGANILVDSDGVVK 141

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 88.7 bits (221), Expect = 6e-22
 Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 16/148 (10%)

Query: 34  EKVGRGSSGTVYKGAMINRQ----LVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVR 88
           +K+G G+ G VYKG +  +      VAV  L++   E ER +F  E +V+ +  H N+VR
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADIL--------FNAEKQPNWIERTGIARDIARGILY 140
           LLG   E     LV EYM  G L D L           +   +  +    A  IA+G+ Y
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120

Query: 141 LHDECETQIIHCDIKPQNILMDENRCAK 168
           L      + +H D+  +N L+ E+   K
Sbjct: 121 LA---SKKFVHRDLAARNCLVGEDLVVK 145

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 83.1 bits (206), Expect = 8e-20
 Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 7/133 (5%)

Query: 32  FKEKVGRGSSGTVYKGAMINR-QLVAVNR--LEKVLDEREREFQTEIKVIGRTHHRNLVR 88
             + +GRG+ G VYKG  +     VA+ +  LEK+ +E  +    EI ++    H N+V+
Sbjct: 4   LGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVK 63

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
            +G         ++ EY  NGSL  I+      P  +    + + + +G+ YLH++    
Sbjct: 64  YIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQ-VLQGLAYLHEQ---G 119

Query: 149 IIHCDIKPQNILM 161
           +IH DIK  NIL 
Sbjct: 120 VIHRDIKAANILT 132

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 80.5 bits (199), Expect = 9e-19
 Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
               +G+G  G V  G    ++ VAV  L+      +  F  E  V+    H NLV+LLG
Sbjct: 10  LGATIGKGEFGDVMLGDYRGQK-VAVKCLKDDSTAAQ-AFLAEASVMTTLRHPNLVQLLG 67

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQII 150
             L+ +   +V EYM+ GSL D L +  +      ++ G A D+  G+ YL    E   +
Sbjct: 68  VVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFV 124

Query: 151 HCDIKPQNILMDENRCAK 168
           H D+  +N+L+ E+  AK
Sbjct: 125 HRDLAARNVLVSEDLVAK 142

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 76.9 bits (190), Expect = 2e-17
 Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 15/141 (10%)

Query: 35  KVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRLL 90
            +G+GSSG VYK    ++   ++ A+ ++    DE  R +   E+K +       +V+  
Sbjct: 8   VLGQGSSGVVYKV--RHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCY 65

Query: 91  GYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIER--TGIARDIARGILYLHDECET 147
           G +     +I +V EYM  GSLAD+L   +K     E     IAR I +G+ YLH +   
Sbjct: 66  G-AFYKEGEISIVLEYMDGGSLADLL---KKVGKIPEPVLAYIARQILKGLDYLHTK--R 119

Query: 148 QIIHCDIKPQNILMDENRCAK 168
            IIH DIKP N+L++     K
Sbjct: 120 HIIHRDIKPSNLLINSKGEVK 140

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 76.1 bits (188), Expect = 3e-17
 Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 8/135 (5%)

Query: 33  KEKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
            EK+G+G  G VYK       + VA+  ++    E++ +   EI+++ +  H N+V+  G
Sbjct: 5   LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYG 64

Query: 92  YSLEVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
             L+  +  +V E+ S GSL D+L   N     + I    + +++ +G+ YLH      I
Sbjct: 65  SYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQI--AYVCKELLKGLEYLHSN---GI 119

Query: 150 IHCDIKPQNILMDEN 164
           IH DIK  NIL+  +
Sbjct: 120 IHRDIKAANILLTSD 134

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 75.1 bits (185), Expect = 9e-17
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 8/140 (5%)

Query: 34  EKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVR 88
           + +G G  G V +G +         VA+  L+    +++R +F TE  ++G+  H N++R
Sbjct: 10  KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIR 69

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           L G   +    +++ EYM NGSL   L   + +    +  G+ R IA G+ YL +     
Sbjct: 70  LEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN--- 126

Query: 149 IIHCDIKPQNILMDENRCAK 168
            +H D+  +NIL++ N   K
Sbjct: 127 YVHRDLAARNILVNSNLVCK 146

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 17/138 (12%)

Query: 34  EKVGRGSSGTVYKGAMINR--QLVAVNR--LEKVLDEREREFQTEIKVIGRTHHRNLVRL 89
           E +G+GS G VYK     R  Q+VA+    LE+  DE E + Q EI+ + +     + + 
Sbjct: 7   ECIGKGSFGEVYKAI-DKRTNQVVAIKVIDLEEAEDEIE-DIQQEIQFLSQCRSPYITKY 64

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDECE 146
            G  L+ SK  ++ EY   GS  D+L     +P  ++ T IA   R++  G+ YLH+E  
Sbjct: 65  YGSFLKGSKLWIIMEYCGGGSCLDLL-----KPGKLDETYIAFILREVLLGLEYLHEE-- 117

Query: 147 TQIIHCDIKPQNILMDEN 164
              IH DIK  NIL+ E 
Sbjct: 118 -GKIHRDIKAANILLSEE 134

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 11/137 (8%)

Query: 32  FKEKVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
             EK+G G+SG VYK    +R   + VA+ ++ ++  + +     EI ++    H N+V 
Sbjct: 23  NLEKIGEGASGEVYKA--TDRATGKEVAIKKM-RLRKQNKELIINEILIMKDCKHPNIVD 79

Query: 89  LLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
               S  V  ++ +V EYM  GSL DI+     + N  +   + R++ +G+ YLH     
Sbjct: 80  YYD-SYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLH---SQ 135

Query: 148 QIIHCDIKPQNILMDEN 164
            +IH DIK  NIL+ ++
Sbjct: 136 NVIHRDIKSDNILLSKD 152

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 72.9 bits (180), Expect = 8e-16
 Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 21/146 (14%)

Query: 33  KEKVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDERERE--FQT---EIKVIGRTHHR 84
            EK+G G+ G VYK    ++   ++VA   L+K+  + E E    T   EI ++    H 
Sbjct: 4   LEKLGEGTYGVVYKA--RDKKTGEIVA---LKKIRLDNEEEGIPSTALREISLLKELKHP 58

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQ--PNWIERTGIARDIARGILYLH 142
           N+V+LL       K  LV+EY     L   L        PN I+   I   + RG+ Y H
Sbjct: 59  NIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKS--IMYQLLRGLAYCH 115

Query: 143 DECETQIIHCDIKPQNILMDENRCAK 168
                +I+H D+KPQNIL++ +   K
Sbjct: 116 SH---RILHRDLKPQNILINRDGVLK 138

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 72.5 bits (176), Expect = 2e-15
 Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 11/140 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE---FQTEIKVIGR-THHRNLV 87
              K+G GS G VY     +R+LVA+  L K L+ + +E   F  EI+++    H  N+V
Sbjct: 4   ILRKLGEGSFGEVYLA--RDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIV 61

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER--TGIARDIARGILYLHDEC 145
           +L  +  +     LV EY+  GSL D+L    ++    E     I   I   + YLH   
Sbjct: 62  KLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH--- 118

Query: 146 ETQIIHCDIKPQNILMDENR 165
              IIH DIKP+NIL+D + 
Sbjct: 119 SKGIIHRDIKPENILLDRDG 138

Length = 384

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 71.6 bits (175), Expect = 3e-15
 Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 15/141 (10%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRLLGY 92
           E VG G+ G VYKG  +    +A  ++  V ++ E E + EI ++ + +HHRN+    G 
Sbjct: 22  EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGA 81

Query: 93  SLEVS------KKILVYEYMSNGSLADILFNAEK---QPNWIERTGIARDIARGILYLHD 143
            ++ S      +  LV E+   GS+ D++ N +    + +WI    I R+I RG+ +LH 
Sbjct: 82  FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAY--ICREILRGLAHLHA 139

Query: 144 ECETQIIHCDIKPQNILMDEN 164
               ++IH DIK QN+L+ EN
Sbjct: 140 H---KVIHRDIKGQNVLLTEN 157

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 70.8 bits (174), Expect = 3e-15
 Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
             +++G G+ G VYK   I   +LVA+  ++    +     Q EI ++    H N+V   
Sbjct: 7   LIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYF 66

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDECET 147
           G  L   K  +V EY   GSL DI +   + P  +    IA   R+  +G+ YLH   ET
Sbjct: 67  GSYLRRDKLWIVMEYCGGGSLQDI-YQVTRGP--LSELQIAYVCRETLKGLAYLH---ET 120

Query: 148 QIIHCDIKPQNILMDENRCAK 168
             IH DIK  NIL+ E+   K
Sbjct: 121 GKIHRDIKGANILLTEDGDVK 141

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 70.0 bits (172), Expect = 8e-15
 Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 21/146 (14%)

Query: 33  KEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGR-THHRNLV 87
            E +G G+ G VYK       QLVA+    K++D   + E E + E  ++ + ++H N+ 
Sbjct: 11  VEVIGEGTYGKVYKARHKKTGQLVAI----KIMDIIEDEEEEIKEEYNILRKYSNHPNIA 66

Query: 88  RLLGYSLEVSKKI------LVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGI 138
              G  ++ +         LV E    GS+ D++    K+   ++   IA   R+  RG+
Sbjct: 67  TFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGL 126

Query: 139 LYLHDECETQIIHCDIKPQNILMDEN 164
            YLH+    ++IH DIK QNIL+ +N
Sbjct: 127 AYLHEN---KVIHRDIKGQNILLTKN 149

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 68.9 bits (169), Expect = 2e-14
 Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 7/133 (5%)

Query: 35  KVGRGSSGTVYKGAMINR-QLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           K+G G+ G VY    ++  +L+AV   R++    +  +E   E+KV+    H NLV+  G
Sbjct: 7   KIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYG 66

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
             +   K  +  EY S G+L ++L +       + R      +  G+ YLH      I+H
Sbjct: 67  VEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRV-YTLQLLEGLAYLH---SHGIVH 122

Query: 152 CDIKPQNILMDEN 164
            DIKP NI +D N
Sbjct: 123 RDIKPANIFLDHN 135

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 69.0 bits (169), Expect = 2e-14
 Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 11/145 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-----RQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRN 85
           F +++G G  G V             + VAV  L    +E+ R +F+ EI+++    H N
Sbjct: 8   FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHEN 67

Query: 86  LVRLLGYSLEVSKKI--LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
           +V+  G   +   +   L+ EY+ +GSL D L     Q N       +  I +G+ YL  
Sbjct: 68  IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS 127

Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
           +   + IH D+  +NIL++     K
Sbjct: 128 Q---RYIHRDLAARNILVESEDLVK 149

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 68.4 bits (168), Expect = 2e-14
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 10/140 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQ---LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
             EK+G GS G+VYK   I+++   +VA+  +   ++E  +E   EI ++ +     +V+
Sbjct: 7   ILEKLGEGSYGSVYKA--IHKETGQVVAIKVVP--VEEDLQEIIKEISILKQCDSPYIVK 62

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
             G   + +   +V EY   GS++DI+    K     E   I     +G+ YLH     +
Sbjct: 63  YYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---K 119

Query: 149 IIHCDIKPQNILMDENRCAK 168
            IH DIK  NIL++E   AK
Sbjct: 120 KIHRDIKAGNILLNEEGQAK 139

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 68.3 bits (167), Expect = 3e-14
 Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 4/136 (2%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGY 92
           EK+G+G+ G VYKG +     VAV      L  + +R+F  E +++ +  H N+V+L+G 
Sbjct: 1   EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGV 60

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            ++     +V E +  GSL   L   + +    +   ++ D A G+ YL  +     IH 
Sbjct: 61  CVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN---CIHR 117

Query: 153 DIKPQNILMDENRCAK 168
           D+  +N L+ EN   K
Sbjct: 118 DLAARNCLVGENNVLK 133

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 68.1 bits (166), Expect = 3e-14
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 10/140 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHRNLVR 88
             +++G G  G V+ G  + ++ VA+    K + E    E +F  E +V+ +  H  LV+
Sbjct: 8   LVQEIGSGQFGLVWLGYWLEKRKVAI----KTIREGAMSEEDFIEEAQVMMKLSHPKLVQ 63

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           L G   E S   LV+E+M +G L+D L     + +     G+  D+  G+ YL       
Sbjct: 64  LYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN--- 120

Query: 149 IIHCDIKPQNILMDENRCAK 168
           +IH D+  +N L+ EN+  K
Sbjct: 121 VIHRDLAARNCLVGENQVVK 140

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 68.2 bits (166), Expect = 3e-14
 Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 15/141 (10%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRLLGY 92
           E VG G+ G VYKG  +    +A  ++  V  + E E + EI ++ + +HHRN+    G 
Sbjct: 12  ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 71

Query: 93  SLEVS------KKILVYEYMSNGSLADILFNAEK---QPNWIERTGIARDIARGILYLHD 143
            ++ +      +  LV E+   GS+ D++ N +    +  WI    I R+I RG+ +LH 
Sbjct: 72  FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLH- 128

Query: 144 ECETQIIHCDIKPQNILMDEN 164
             + ++IH DIK QN+L+ EN
Sbjct: 129 --QHKVIHRDIKGQNVLLTEN 147

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 67.1 bits (164), Expect = 7e-14
 Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 14/143 (9%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLD-----EREREFQTEIKVIGRTHHRNLV 87
           E +G GS G+VY+G  + +    AV  +    D     E  ++ + EI ++ +  H N+V
Sbjct: 6   ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIV 65

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LG   E     +  E +  GSLA +L  + +  +P     T   R I  G+ YLHD  
Sbjct: 66  QYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYT---RQILLGLEYLHDR- 121

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
               +H DIK  NIL+D N   K
Sbjct: 122 --NTVHRDIKGANILVDTNGVVK 142

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 67.2 bits (164), Expect = 8e-14
 Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 14/139 (10%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLE-----KVLDERE-REFQTEIKVIGRTHHRNLV 87
           E +G+G+ GTVY G     QL+AV ++E      +  E+E  + Q E+ ++    H N+V
Sbjct: 6   EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LG  L+ +   +  E++  GS++ IL  F    +P + + T   + I  G+ YLH+ C
Sbjct: 66  QYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYT---KQILDGVAYLHNNC 122

Query: 146 ETQIIHCDIKPQNILMDEN 164
              ++H DIK  N+++  N
Sbjct: 123 ---VVHRDIKGNNVMLMPN 138

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 66.7 bits (163), Expect = 1e-13
 Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 4/136 (2%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
            K+G G  G V++G   NR  VA+  L+     ++++FQ E++ + R  H++L+ L    
Sbjct: 12  RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVC 71

Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQPNWIER-TGIARDIARGILYLHDECETQIIHC 152
                  ++ E M  GSL   L + E Q   +     +A  +A G+ YL ++     IH 
Sbjct: 72  SVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHR 128

Query: 153 DIKPQNILMDENRCAK 168
           D+  +NIL+ E+   K
Sbjct: 129 DLAARNILVGEDLVCK 144

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 66.6 bits (162), Expect = 1e-13
 Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 15/136 (11%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           E++G+GS G VYKG     +++VA+    LE+  DE E + Q EI V+ +     + R  
Sbjct: 10  ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYITRYY 68

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDECET 147
           G  L+ +K  ++ EY+  GS  D+L     +P  +E T IA   R+I +G+ YLH E   
Sbjct: 69  GSYLKGTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHSE--- 120

Query: 148 QIIHCDIKPQNILMDE 163
           + IH DIK  N+L+ E
Sbjct: 121 RKIHRDIKAANVLLSE 136

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 65.5 bits (160), Expect = 3e-13
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 13/140 (9%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQT---EIKVIGRTHHRNLV 87
             E +G G++  VY    + N + VA+ R++  L++ +        E++ + + +H N+V
Sbjct: 5   LIEVIGVGATAVVYAAICLPNNEKVAIKRID--LEKCQTSVDELRKEVQAMSQCNHPNVV 62

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADIL---FNAEKQPNWIERTGIARDIARGILYLHDE 144
           +     +   +  LV  Y+S GSL DI+   +        I  T + +++ +G+ YLH  
Sbjct: 63  KYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIAT-VLKEVLKGLEYLHSN 121

Query: 145 CETQIIHCDIKPQNILMDEN 164
                IH DIK  NIL+ E+
Sbjct: 122 ---GQIHRDIKAGNILLGED 138

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 66.0 bits (161), Expect = 3e-13
 Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 27/168 (16%)

Query: 9   SNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINR---QLVAVNRLEKVL- 64
           S+ S      + S +EL+++      ++G G+ GTVYK  +I+R   +L A+    KV+ 
Sbjct: 60  SSASGSAPSAAKSLSELERV-----NRIGSGAGGTVYK--VIHRPTGRLYAL----KVIY 108

Query: 65  ----DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEK 120
               D   R+   EI+++   +H N+V+         +  ++ E+M  GSL       E+
Sbjct: 109 GNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQ 168

Query: 121 QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
                    +AR I  GI YLH      I+H DIKP N+L++  +  K
Sbjct: 169 F-----LADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVK 208

Length = 353

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 65.3 bits (159), Expect = 3e-13
 Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 8/141 (5%)

Query: 33  KEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLV 87
           +E +G G  G V +G +         VA+  L+    E++R +F +E  ++G+  H N++
Sbjct: 9   EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNII 68

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
            L G   +    +++ E+M NG+L   L   + Q   I+  G+ R IA G+ YL    E 
Sbjct: 69  HLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---SEM 125

Query: 148 QIIHCDIKPQNILMDENRCAK 168
             +H D+  +NIL++ N   K
Sbjct: 126 NYVHRDLAARNILVNSNLVCK 146

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 64.9 bits (159), Expect = 5e-13
 Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 19/139 (13%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDERERE-F-QT---EIKVIGRTHHRNLV 87
            ++G G+ G VYK       +LVA   L+K+  E E+E F  T   EIK++ +  H N+V
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVA---LKKIRMENEKEGFPITAIREIKLLQKLRHPNIV 61

Query: 88  RLLGYSLEVSKKI----LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
           RL    +  SK      +V+EYM +  L  +L + E +    +     + +  G+ YLH 
Sbjct: 62  RL--KEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHS 118

Query: 144 ECETQIIHCDIKPQNILMD 162
                I+H DIK  NIL++
Sbjct: 119 N---GILHRDIKGSNILIN 134

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 64.6 bits (157), Expect = 7e-13
 Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 9/138 (6%)

Query: 33  KEKV-GRGSSGTVYKGAMI----NRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNL 86
           K+KV G G  G V++G +         VA+  L+    E++R +F +E  ++G+  H N+
Sbjct: 9   KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNI 68

Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           +RL G   +    +++ EYM NG+L   L + + + +  +  G+ R IA G+ YL D   
Sbjct: 69  IRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSD--- 125

Query: 147 TQIIHCDIKPQNILMDEN 164
              +H D+  +NIL++ N
Sbjct: 126 MNYVHRDLAARNILVNSN 143

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 63.6 bits (154), Expect = 2e-12
 Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 17/138 (12%)

Query: 34  EKVGRGSSGTVYKGAMINR--QLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRL 89
           EK+G+GS G V+KG + NR  ++VA+    LE+  DE E + Q EI V+ +     + + 
Sbjct: 10  EKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYVTKY 67

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDECE 146
            G  L+ +K  ++ EY+  GS  D+L     +P  ++ T IA   R+I +G+ YLH E  
Sbjct: 68  YGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHSE-- 120

Query: 147 TQIIHCDIKPQNILMDEN 164
            + IH DIK  N+L+ E+
Sbjct: 121 -KKIHRDIKAANVLLSEH 137

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 63.5 bits (155), Expect = 2e-12
 Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 12/135 (8%)

Query: 35  KVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRLL 90
           ++G G+SG V K  +++R   +++AV  +   ++E  + +   E+ ++ + +   +V   
Sbjct: 8   ELGAGNSGVVSK--VLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFY 65

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT--GIARDIARGILYLHDECETQ 148
           G         +  EYM  GSL  IL   + +    ER    IA  + +G+ YLH++   +
Sbjct: 66  GAFYNNGDISICMEYMDGGSLDKILKEVQGRIP--ERILGKIAVAVLKGLTYLHEK--HK 121

Query: 149 IIHCDIKPQNILMDE 163
           IIH D+KP NIL++ 
Sbjct: 122 IIHRDVKPSNILVNS 136

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 45/140 (32%), Positives = 62/140 (44%), Gaps = 11/140 (7%)

Query: 33  KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHRNLVRL 89
           + K+G G  G V+ G       VAV    K L         F  E +++ +  H  LV+L
Sbjct: 11  ERKLGAGQFGEVWMGTWNGTTKVAV----KTLKPGTMSPEAFLQEAQIMKKLRHDKLVQL 66

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQ 148
                E     +V EYMS GSL D L + E K+    +   +A  IA G+ YL       
Sbjct: 67  YAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRN 123

Query: 149 IIHCDIKPQNILMDENRCAK 168
            IH D+  +NIL+ EN   K
Sbjct: 124 YIHRDLAARNILVGENLVCK 143

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 7/138 (5%)

Query: 34  EKVGRGSSGTVYKGAMINR-QLVAVNR--LEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
            ++G G+ G V+K       + VA+ +  L ++      +   EIK +    H  +V+LL
Sbjct: 6   GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLL 65

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
                 S  +LV EYM    L+++L + E+     +     R + +G+ Y+H      I+
Sbjct: 66  DVFPHGSGFVLVMEYMP-SDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIM 121

Query: 151 HCDIKPQNILMDENRCAK 168
           H D+KP N+L+  +   K
Sbjct: 122 HRDLKPANLLISADGVLK 139

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 62.1 bits (151), Expect = 6e-12
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 16/139 (11%)

Query: 36  VGRGSSGTVYKGAMINR------QLVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    R        VAV  L +   E+ E +F  E  ++ + +H+N+VR
Sbjct: 14  LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVR 73

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
           L+G S E   + ++ E M+ G L   L     +P         +    ARD+A+G  YL 
Sbjct: 74  LIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE 133

Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 134 ---ENHFIHRDIAARNCLL 149

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 62.0 bits (151), Expect = 6e-12
 Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 21/145 (14%)

Query: 34  EKVGRGSSGTVYKGAMINR-QLVAVNR-LEKVLDEREREFQT-EIKVIGRTHHRNLVRLL 90
             VG GS G V K       Q+VA+ + LE   D+  ++    EI+++ +  H NLV L+
Sbjct: 7   GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLI 66

Query: 91  GYSLEVSKK----ILVYEYMSNGSLADILFNAEKQPNWIERTGIAR---DIARGILYLHD 143
               EV ++     LV+E++ +  L D+    EK PN ++ + + +    I RGI + H 
Sbjct: 67  ----EVFRRKKRLYLVFEFVDHTVLDDL----EKYPNGLDESRVRKYLFQILRGIEFCHS 118

Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
                IIH DIKP+NIL+ ++   K
Sbjct: 119 H---NIIHRDIKPENILVSQSGVVK 140

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 61.5 bits (149), Expect = 1e-11
 Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 8/138 (5%)

Query: 36  VGRGSSGTVYKGAMI---NRQL-VAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRLL 90
           +G G  G V  G +     R++ VA+  L+    E++R +F +E  ++G+  H N++ L 
Sbjct: 12  IGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G   +    ++V EYM NGSL   L   + Q   I+  G+ R IA G+ YL D      +
Sbjct: 72  GVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSD---MGYV 128

Query: 151 HCDIKPQNILMDENRCAK 168
           H D+  +NIL++ N   K
Sbjct: 129 HRDLAARNILVNSNLVCK 146

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 60.7 bits (147), Expect = 1e-11
 Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 10/146 (6%)

Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
            L+K+T G  E +G G  G V +G     Q VAV  ++   D   + F  E  V+ + HH
Sbjct: 4   NLQKLTLG--EIIGEGEFGAVLQGEYTG-QKVAVKNIK--CDVTAQAFLEETAVMTKLHH 58

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLH 142
           +NLVRLLG  L     I V E MS G+L + L    +   + I+    + D+A G+ YL 
Sbjct: 59  KNLVRLLGVILHNGLYI-VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE 117

Query: 143 DECETQIIHCDIKPQNILMDENRCAK 168
            +   +++H D+  +NIL+ E+  AK
Sbjct: 118 SK---KLVHRDLAARNILVSEDGVAK 140

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 60.9 bits (148), Expect = 1e-11
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 23/153 (15%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHR 84
            K ++G G+ G V+ G   +      ++LVAV  L E   ++  ++F+ E +++    H 
Sbjct: 9   LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILF-------------NAEKQPNWIERTGIA 131
           N+V+  G   E    I+V+EYM +G L   L              +   +    +   IA
Sbjct: 69  NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128

Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
             IA G++YL  +     +H D+  +N L+  +
Sbjct: 129 VQIASGMVYLASQ---HFVHRDLATRNCLVGYD 158

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 60.2 bits (146), Expect = 2e-11
 Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 14/137 (10%)

Query: 36  VGRGSSGTVYKGA-MINRQLVAVNRLE-----KVLDERERE----FQTEIKVIGRTHHRN 85
           +G GS G+VY G    + +L+AV ++E         +R+R        EI ++    H N
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           +V+ LG SL+     +  EY+  GS+A +L N       + R  + R I +G+ YLH+  
Sbjct: 68  IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFV-RQILKGLNYLHNR- 125

Query: 146 ETQIIHCDIKPQNILMD 162
              IIH DIK  NIL+D
Sbjct: 126 --GIIHRDIKGANILVD 140

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 60.3 bits (146), Expect = 3e-11
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 12/124 (9%)

Query: 41  SGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI 100
           +GT+    M  +Q+  V       +E     + EI+++ R +H +++R+LG + E S   
Sbjct: 24  TGTL----MAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFN 79

Query: 101 LVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           L  E+M+ GS++ +L  + A K+   I  T     + RG+ YLH+    QIIH D+K  N
Sbjct: 80  LFVEWMAGGSVSHLLSKYGAFKEAVIINYT---EQLLRGLSYLHEN---QIIHRDVKGAN 133

Query: 159 ILMD 162
           +L+D
Sbjct: 134 LLID 137

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 60.0 bits (146), Expect = 4e-11
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 17/143 (11%)

Query: 34  EKVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDERE--REFQTEIKVIGRTHHRNLVR 88
             VG G+ G V K    N+   ++VA+ + ++  D+ +  +    E+KV+ +  H N+V 
Sbjct: 7   GVVGEGAYGVVLKCR--NKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVN 64

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDI---ARGILYLHDEC 145
           L        +  LV+EY+   +L ++L   E  P  +    +   I    + I Y H   
Sbjct: 65  LKEAFRRKGRLYLVFEYVER-TLLELL---EASPGGLPPDAVRSYIWQLLQAIAYCH--- 117

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
              IIH DIKP+NIL+ E+   K
Sbjct: 118 SHNIIHRDIKPENILVSESGVLK 140

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 60.1 bits (146), Expect = 4e-11
 Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 19/144 (13%)

Query: 35  KVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERERE-----FQTEIKVIGRTHHRNLVR 88
           ++G G+ G VY+     + ++VA   L+KV  + ER+        EI ++    H N+V 
Sbjct: 14  RIGEGTYGIVYRARDTTSGEIVA---LKKVRMDNERDGIPISSLREITLLLNLRHPNIVE 70

Query: 89  LL----GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
           L     G  L+     LV EY     LA +L N     +  +   +   + RG+ YLH+ 
Sbjct: 71  LKEVVVGKHLD--SIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN 127

Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
               IIH D+K  N+L+ +  C K
Sbjct: 128 F---IIHRDLKVSNLLLTDKGCLK 148

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 59.5 bits (144), Expect = 4e-11
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 10/140 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHRNLVR 88
           F +++G G  G V  G    +  VA+    K++ E    E EF  E KV+ +  H  LV+
Sbjct: 8   FLKELGTGQFGVVKYGKWRGQYDVAI----KMIKEGSMSEDEFIEEAKVMMKLSHEKLVQ 63

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           L G   +     +V EYMSNG L + L    K+    +   + +D+  G+ YL  +   Q
Sbjct: 64  LYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---Q 120

Query: 149 IIHCDIKPQNILMDENRCAK 168
            IH D+  +N L+D+  C K
Sbjct: 121 FIHRDLAARNCLVDDQGCVK 140

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 58.8 bits (143), Expect = 8e-11
 Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 18/149 (12%)

Query: 34  EKVGRGSSGTVYKGAMINR----QLVAVNRLE-KVLDEREREFQT-EIKVIGRTHHRNLV 87
           E +G+GS GTV K   + R    +++    ++   + E+E++    E+ ++    H N+V
Sbjct: 6   ETIGKGSFGTVRK---VRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIV 62

Query: 88  RLLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           R     ++ S + L  V EY   G LA ++   +K+  +IE   I R + + +L L+ EC
Sbjct: 63  RYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALY-EC 121

Query: 146 ------ETQIIHCDIKPQNILMDENRCAK 168
                    ++H D+KP NI +D N   K
Sbjct: 122 HNRSDPGNTVLHRDLKPANIFLDANNNVK 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 58.7 bits (142), Expect = 8e-11
 Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 8/139 (5%)

Query: 29  TDGFKEKV--GRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
            D   E+V  G+G+ G VY    ++ Q+ +A+  + +      +    EI +     HRN
Sbjct: 7   YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRN 66

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGI--ARDIARGILYLHD 143
           +V+ LG   E     +  E +  GSL+ +L +        E+T I   + I  G+ YLHD
Sbjct: 67  IVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD 126

Query: 144 ECETQIIHCDIKPQNILMD 162
               QI+H DIK  N+L++
Sbjct: 127 N---QIVHRDIKGDNVLVN 142

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 58.9 bits (142), Expect = 9e-11
 Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 21/155 (13%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
            K ++G G+ G V+     N      + LVAV  L+   D   ++F  E +++    H +
Sbjct: 9   LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 68

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSL--------ADILFNAEKQP----NWIERTGIARD 133
           +V+  G  +E    I+V+EYM +G L         D +  AE          +   IA+ 
Sbjct: 69  IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQ 128

Query: 134 IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           IA G++YL  +     +H D+  +N L+ EN   K
Sbjct: 129 IAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 58.3 bits (141), Expect = 1e-10
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)

Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 2   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 60

Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  N +    +A  I+  + YL
Sbjct: 61  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 120

Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
               +   IH D+  +N L+ EN   K
Sbjct: 121 E---KKNFIHRDLAARNCLVGENHLVK 144

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 58.3 bits (141), Expect = 1e-10
 Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 17/160 (10%)

Query: 36  VGRGSSGTVYKGAMIN-------RQLVAVNRLEK-VLDEREREFQTEIKVIGRTHHRNLV 87
           +G G+ G VY+G   +          VAV  L K   D+ ++EF  E  ++   +H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNW------IERTGIARDIARGILYL 141
           +LLG  L    + ++ E M  G L   L +A  +          E   I  D+A+G +YL
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL 122

Query: 142 HDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEAR 181
                   IH D+  +N L+ E     +  + IG    AR
Sbjct: 123 EQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 58.3 bits (141), Expect = 1e-10
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 9/153 (5%)

Query: 20  FSYAELKKITDGFKEKVGRGSSGTVYKGA-MINRQLVAVNRLE---KVLDEREREFQTEI 75
           FS  + +K+    +E +G GS G VY    +   ++VA+ ++    K  +E+ ++   E+
Sbjct: 8   FSKDDPEKLFTDLRE-IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEV 66

Query: 76  KVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIA 135
           + + +  H N +   G  L      LV EY   GS +DIL   +K    +E   I     
Sbjct: 67  RFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGAL 125

Query: 136 RGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           +G+ YLH       IH DIK  NIL+ E    K
Sbjct: 126 QGLAYLHSHER---IHRDIKAGNILLTEPGTVK 155

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 19/145 (13%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE-----FQTEIKVIGRTHHRNLVR 88
           EK+G G+ G VYKG   N++   +  ++K+  E E E        EI ++    H N+V 
Sbjct: 6   EKIGEGTYGVVYKGR--NKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVC 63

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NWIERTGIAR---DIARGILYLHD 143
           L    ++ S+  L++E++S     D+    +  P   +++   +      I +GIL+ H 
Sbjct: 64  LQDVLMQESRLYLIFEFLS----MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS 119

Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
               +++H D+KPQN+L+D     K
Sbjct: 120 R---RVLHRDLKPQNLLIDNKGVIK 141

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 10/140 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHRNLVR 88
           F +++G G  G V+ G    +  VA+    K++ E    E +F  E KV+ +  H NLV+
Sbjct: 8   FLKELGSGQFGVVHLGKWRGKIDVAI----KMIREGAMSEDDFIEEAKVMMKLSHPNLVQ 63

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           L G   +     +V EYM+NG L + L   + +        +  D+   + YL       
Sbjct: 64  LYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE---SNG 120

Query: 149 IIHCDIKPQNILMDENRCAK 168
            IH D+  +N L+ E+   K
Sbjct: 121 FIHRDLAARNCLVGEDNVVK 140

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 57.5 bits (140), Expect = 2e-10
 Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 21/144 (14%)

Query: 33  KEKVGRGSSGTVYKGAMI-NRQLVAVNRLE-KVLDEREREF-QTEIKVIGRTHHRNLVRL 89
            +++G+GS G VY      + +L  +  ++   + E+ERE    E+K++ + +H N+++ 
Sbjct: 5   IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKY 64

Query: 90  LGYSLEVSKKILVYEYMSNGSLADIL--FNAEKQP-------NWIERTGIARDIARGILY 140
                E  K  +V EY   G L+  +     E +P       +W         +   + Y
Sbjct: 65  YESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWF------VQLCLALKY 118

Query: 141 LHDECETQIIHCDIKPQNILMDEN 164
           LH     +I+H DIKPQNI +  N
Sbjct: 119 LHSR---KILHRDIKPQNIFLTSN 139

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 57.4 bits (138), Expect = 3e-10
 Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 34  EKVGRGSSGTVYKGAMINR--QLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRL 89
           E++G+GS G V+KG + NR  Q+VA+    LE+  DE E + Q EI V+ +     + + 
Sbjct: 10  ERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYVTKY 67

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQ 148
            G  L+ +K  ++ EY+  GS  D+L      P +  +   + ++I +G+ YLH E   +
Sbjct: 68  YGSYLKGTKLWIIMEYLGGGSALDLL---RAGPFDEFQIATMLKEILKGLDYLHSE---K 121

Query: 149 IIHCDIKPQNILMDEN 164
            IH DIK  N+L+ E 
Sbjct: 122 KIHRDIKAANVLLSEQ 137

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 57.2 bits (139), Expect = 3e-10
 Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 15/141 (10%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQ---TEIKVIGR-THHRNL 86
           F + +G GS  TV         +  A+  L+K    +E++ +    E +V+ R   H  +
Sbjct: 5   FGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGI 64

Query: 87  VRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGILYLHD 143
           ++L  Y+ +  + +  V EY  NG L   +    K  +  E+     A +I   + YLH 
Sbjct: 65  IKLY-YTFQDEENLYFVLEYAPNGELLQYI---RKYGSLDEKCTRFYAAEILLALEYLHS 120

Query: 144 ECETQIIHCDIKPQNILMDEN 164
           +    IIH D+KP+NIL+D++
Sbjct: 121 K---GIIHRDLKPENILLDKD 138

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 57.1 bits (138), Expect = 3e-10
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 20/147 (13%)

Query: 34  EKVGRGSSGTVYKGAMINRQLV----AVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL 89
            ++G G+ G+V K  + N  ++     +        + +++   E+++        +V+ 
Sbjct: 7   SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKY 64

Query: 90  LG-YSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTG------IARDIARGILYL 141
            G +  E S  I +  EY   GSL  I    +K+     R G      IA  + +G+ YL
Sbjct: 65  YGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGG---RIGEKVLGKIAESVLKGLSYL 121

Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
           H     +IIH DIKP NIL+      K
Sbjct: 122 HSR---KIIHRDIKPSNILLTRKGQVK 145

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 57.2 bits (138), Expect = 4e-10
 Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 6/129 (4%)

Query: 34  EKVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           EK+G+G+SGTVY    +   Q VA+ ++      ++     EI V+    H N+V  L  
Sbjct: 25  EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDS 84

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            L   +  +V EY++ GSL D++   E   +  +   + R+  + + +LH     Q+IH 
Sbjct: 85  YLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLH---SNQVIHR 139

Query: 153 DIKPQNILM 161
           DIK  NIL+
Sbjct: 140 DIKSDNILL 148

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 56.7 bits (137), Expect = 4e-10
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 9/141 (6%)

Query: 34  EKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVR 88
             +G+G  G VY G +I     +   AV  L ++ D  E E F  E  ++    H N++ 
Sbjct: 1   RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLS 60

Query: 89  LLGYSL-EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
           LLG  L      ++V  YM +G L + + +    P   +  G    +A+G+ YL      
Sbjct: 61  LLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYL---ASK 117

Query: 148 QIIHCDIKPQNILMDENRCAK 168
           + +H D+  +N ++DE+   K
Sbjct: 118 KFVHRDLAARNCMLDESFTVK 138

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 56.7 bits (137), Expect = 4e-10
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 37/155 (23%)

Query: 23  AELKKITDGFKEKV-GRGSSGTVYKGAMI-----NRQLVAVNRLEKVLDERE-----REF 71
            EL+KI      KV G G+ GTVYKG  I      +  VA+    KVL E       +E 
Sbjct: 7   TELEKI------KVLGSGAFGTVYKGVWIPEGEKVKIPVAI----KVLREETSPKANKEI 56

Query: 72  QTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWI 125
             E  V+    H ++VRLLG  L  S+  L+ + M  G L D +        ++   NW 
Sbjct: 57  LDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNW- 114

Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNIL 160
                   IA+G+ YL    E +++H D+  +N+L
Sbjct: 115 -----CVQIAKGMSYLE---EKRLVHRDLAARNVL 141

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 55.5 bits (134), Expect = 1e-09
 Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 17/158 (10%)

Query: 31  GFK--EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV----LDEREREFQ-TEIKVIGRTH 82
            FK  +K+G+GS G+VYK   + + Q  A   L++V    + ++ERE    EI+++   +
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYA---LKEVDLGSMSQKEREDAVNEIRILASVN 57

Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR---DIARGIL 139
           H N++      L+ +K  +V EY   G L+  +   +K+   I    I R    + RG+ 
Sbjct: 58  HPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQ 117

Query: 140 YLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV 177
            LH++   +I+H D+K  NIL+  N   K   L I KV
Sbjct: 118 ALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKV 152

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 26/142 (18%)

Query: 36  VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDE--------REREFQTEIKVIGRTHHRNL 86
           +G G+ GTVYK   +   + VA+ ++   L E        RE      +K +    H N+
Sbjct: 7   IGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIAL---LKQLESFEHPNI 63

Query: 87  VRLL----GYSLEVSKKI-LVYEYMSNGSLADILFNAEKQ---PNWIERTGIARDIARGI 138
           VRLL    G   +   K+ LV+E++    LA  L    K    P  I+   + R + RG+
Sbjct: 64  VRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKD--LMRQLLRGV 120

Query: 139 LYLHDECETQIIHCDIKPQNIL 160
            +LH      I+H D+KPQNIL
Sbjct: 121 DFLHSHR---IVHRDLKPQNIL 139

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 55.2 bits (133), Expect = 2e-09
 Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 25/159 (15%)

Query: 32  FKEKVGRGSSGTVYKGAMI--NRQLVAVNRLEKVLDER-----EREFQTEIKVIGRTHHR 84
           F E++G G+ G VYKG +   N +L A +   K L E      ++EF+ E +++    H 
Sbjct: 9   FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHP 68

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILF----NAEKQPNWIERTG----------- 129
           N+V LLG   +     +++EY+++G L + L     +++      + T            
Sbjct: 69  NIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLH 128

Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           IA  IA G+ YL        +H D+  +N L+ E    K
Sbjct: 129 IAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGLTVK 164

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 20/142 (14%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERERE-----FQTEIKVIGRTHHRNLV 87
           EK+G G+ G VYK    +  + +A   L+K+  E+E E        EI ++    H N+V
Sbjct: 8   EKIGEGTYGVVYKARDRVTNETIA---LKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR----DIARGILYLHD 143
           RL        +  LV+EY+      D+  + +  P++ +   + +     I RGI Y H 
Sbjct: 65  RLQDVVHSEKRLYLVFEYLD----LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS 120

Query: 144 ECETQIIHCDIKPQNILMDENR 165
               +++H D+KPQN+L+D   
Sbjct: 121 H---RVLHRDLKPQNLLIDRRT 139

Length = 294

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 55.0 bits (133), Expect = 2e-09
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 21/145 (14%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREF-----QTEIKVIGRTHHRNLV 87
            K+G G+ G VYK   I   ++VA   L+K+L   E++        EIK++ +  H N+V
Sbjct: 14  GKLGEGTFGEVYKARQIKTGRVVA---LKKILMHNEKDGFPITALREIKILKKLKHPNVV 70

Query: 88  RLLGYSLEVSKKI--------LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGIL 139
            L+  ++E   K         +V  YM +  L+ +L N   +    +       +  GI 
Sbjct: 71  PLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGIN 129

Query: 140 YLHDECETQIIHCDIKPQNILMDEN 164
           YLH   E  I+H DIK  NIL+D  
Sbjct: 130 YLH---ENHILHRDIKAANILIDNQ 151

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 54.5 bits (131), Expect = 3e-09
 Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 8/137 (5%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           +K+G G  G V+ G       VA+  L++     E  F  E  ++ +  H  LVRL  Y+
Sbjct: 12  KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPE-AFLAEANLMKQLQHPRLVRL--YA 68

Query: 94  LEVSKKI-LVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIH 151
           +   + I ++ EYM NGSL D L   E  +    +   +A  IA G+ ++        IH
Sbjct: 69  VVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIH 125

Query: 152 CDIKPQNILMDENRCAK 168
            D++  NIL+ E  C K
Sbjct: 126 RDLRAANILVSETLCCK 142

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 54.6 bits (131), Expect = 3e-09
 Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 23/157 (14%)

Query: 32  FKEKVGRGSSGTVYKGAMIN---RQLVAVNRLEKVLDERE-REFQTEIKVIGRT-HHRNL 86
           F++ +G G+ G V K  +     R   A+ R+++   + + R+F  E++V+ +  HH N+
Sbjct: 11  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 70

Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNA---EKQPNW--IERTG----------IA 131
           + LLG         L  EY  +G+L D L  +   E  P +     T            A
Sbjct: 71  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 130

Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            D+ARG+ YL    + Q IH D+  +NIL+ EN  AK
Sbjct: 131 ADVARGMDYL---SQKQFIHRDLAARNILVGENYVAK 164

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 54.5 bits (131), Expect = 3e-09
 Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)

Query: 36  VGRGSSGTVYKGAMIN-RQLVAVNRL--EKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           VGRG+ G V+       ++LV + ++  E++  +     Q E +V+    H N++     
Sbjct: 8   VGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYEN 67

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPN-WIERTGIARDIARGILYLHDECETQIIH 151
            LE    ++V EY   G+LA+ +   +K+ N  ++   I     + +L LH      I+H
Sbjct: 68  FLEDKALMIVMEYAPGGTLAEYI---QKRCNSLLDEDTILHFFVQILLALHHVHTKLILH 124

Query: 152 CDIKPQNILMDENR 165
            D+K QNIL+D+++
Sbjct: 125 RDLKTQNILLDKHK 138

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 54.4 bits (131), Expect = 3e-09
 Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 23/165 (13%)

Query: 19  SFSYAELKKITDGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDER-EREF 71
           +F  + L++IT      +GRG  G V+              LV V  L+K  DE  + EF
Sbjct: 1   AFPRSNLQEIT-----TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEF 55

Query: 72  QTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNW- 124
           + E+ +  +  H+N+VRLLG   E     ++ EY   G L   L          K P   
Sbjct: 56  RRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLS 115

Query: 125 -IERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             ++  +   IA G+ +L +    + +H D+  +N L+   R  K
Sbjct: 116 TKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVK 157

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 53.9 bits (129), Expect = 4e-09
 Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 5/132 (3%)

Query: 34  EKVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           +++G G+ G VYK   +N  +L A+  ++    E     Q EI ++    H N+V   G 
Sbjct: 15  QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGS 74

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            L   K  +  E+   GSL DI ++     +  +   ++R+  +G+ YLH + +   +H 
Sbjct: 75  YLRRDKLWICMEFCGGGSLQDI-YHVTGPLSESQIAYVSRETLQGLYYLHSKGK---MHR 130

Query: 153 DIKPQNILMDEN 164
           DIK  NIL+ +N
Sbjct: 131 DIKGANILLTDN 142

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 53.9 bits (130), Expect = 4e-09
 Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 28/143 (19%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVN--RLEKVLDEREREFQT---EIKVIGRTHHRNLV 87
           EK+G G+ G VYK    +  ++VA+   RLE    E E    T   EI ++   +H N+V
Sbjct: 5   EKIGEGTYGVVYKARDKLTGEIVALKKIRLE---TEDEGVPSTAIREISLLKELNHPNIV 61

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARD--------IARGIL 139
           RLL      +K  LV+E++          + +K  +    TG+           + +GI 
Sbjct: 62  RLLDVVHSENKLYLVFEFLD--------LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIA 113

Query: 140 YLHDECETQIIHCDIKPQNILMD 162
           Y H     +++H D+KPQN+L+D
Sbjct: 114 YCHSH---RVLHRDLKPQNLLID 133

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 54.0 bits (129), Expect = 5e-09
 Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 6/129 (4%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           EK+G+G+SGTVY    I   Q VA+ ++      ++     EI V+    + N+V  L  
Sbjct: 25  EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 84

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            L   +  +V EY++ GSL D++         I    + R+  + + +LH     Q+IH 
Sbjct: 85  YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALDFLH---SNQVIHR 139

Query: 153 DIKPQNILM 161
           DIK  NIL+
Sbjct: 140 DIKSDNILL 148

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 53.6 bits (128), Expect = 7e-09
 Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 6/129 (4%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           EK+G+G+SGTVY    +   Q VA+ ++      ++     EI V+    + N+V  L  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            L   +  +V EY++ GSL D++         I    + R+  + + +LH     Q+IH 
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLH---SNQVIHR 140

Query: 153 DIKPQNILM 161
           DIK  NIL+
Sbjct: 141 DIKSDNILL 149

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 53.2 bits (127), Expect = 8e-09
 Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 6/129 (4%)

Query: 34  EKVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           EK+G+G+SGTV+    +   Q VA+ ++      ++     EI V+    + N+V  L  
Sbjct: 25  EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDS 84

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            L   +  +V EY++ GSL D++   E   +  +   + R+  + + +LH     Q+IH 
Sbjct: 85  FLVGDELFVVMEYLAGGSLTDVV--TETCMDEAQIAAVCRECLQALEFLH---ANQVIHR 139

Query: 153 DIKPQNILM 161
           DIK  N+L+
Sbjct: 140 DIKSDNVLL 148

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 53.7 bits (129), Expect = 8e-09
 Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 10/147 (6%)

Query: 18  FSFSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEI 75
            S S   +  I    KE+  + RG  G  YKG  I      +  + K +++      +EI
Sbjct: 679 VSKSIT-INDILSSLKEENVISRGKKGASYKGKSIKNG---MQFVVKEINDVNSIPSSEI 734

Query: 76  KVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIA 135
             +G+  H N+V+L+G         L++EY+   +L+++L N     +W  R  IA  IA
Sbjct: 735 ADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNL----SWERRRKIAIGIA 790

Query: 136 RGILYLHDECETQIIHCDIKPQNILMD 162
           + + +LH  C   ++  ++ P+ I++D
Sbjct: 791 KALRFLHCRCSPAVVVGNLSPEKIIID 817

Length = 968

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 52.8 bits (127), Expect = 9e-09
 Identities = 34/142 (23%), Positives = 75/142 (52%), Gaps = 12/142 (8%)

Query: 29  TDGFK--EKVGRGSSGTVYKGA-MINRQLVAVNRLE--KVLDERERE-FQTEIKVIGRTH 82
              FK  +K+G+G    VYK   +++ ++VA+ +++  +++D + R+    EI ++ +  
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR---DIARGIL 139
           H N+++ L   +E ++  +V E    G L+ ++ + +KQ   I    I +    +   + 
Sbjct: 61  HPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALE 120

Query: 140 YLHDECETQIIHCDIKPQNILM 161
           ++H     +I+H DIKP N+ +
Sbjct: 121 HMH---SKRIMHRDIKPANVFI 139

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 53.1 bits (127), Expect = 1e-08
 Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 23/157 (14%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
            K ++G G+ G V+     N      + LVAV  L++  +   ++FQ E +++    H++
Sbjct: 9   LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQH 68

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSL----------ADILFNAEKQP----NWIERTGIA 131
           +VR  G   E    ++V+EYM +G L          A IL   E          +   IA
Sbjct: 69  IVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIA 128

Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             IA G++YL        +H D+  +N L+ +    K
Sbjct: 129 SQIASGMVYL---ASLHFVHRDLATRNCLVGQGLVVK 162

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 53.1 bits (127), Expect = 1e-08
 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 25/158 (15%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE-----REREFQTEIKVIGRT-HHRN 85
           F++ +G G+ G V + AMI +  + +N   K+L E       R+F  E++V+ +  HH N
Sbjct: 6   FEDVIGEGNFGQVIR-AMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPN 64

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNA---EKQPNWIERTGIAR---------- 132
           ++ LLG         +  EY   G+L D L  +   E  P + +  G A           
Sbjct: 65  IINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQF 124

Query: 133 --DIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             D+A G+ YL ++   Q IH D+  +N+L+ EN  +K
Sbjct: 125 ASDVATGMQYLSEK---QFIHRDLAARNVLVGENLASK 159

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 52.8 bits (127), Expect = 1e-08
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 6/116 (5%)

Query: 53  QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGS 110
           ++VAV +L+    E  R+F+ EI+++    H N+V+  G  YS       LV EY+  GS
Sbjct: 34  EVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGS 93

Query: 111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
           L D L    ++ +  +    A  I +G+ YL      + +H D+  +NIL++ ENR
Sbjct: 94  LRDYLQKHRERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENR 146

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 52.5 bits (127), Expect = 1e-08
 Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 12/134 (8%)

Query: 36  VGRGSSGTVYKGAMIN--RQLVAVNRLEK--VLDEREREF-QTEIKVIGRTHHRNLVRLL 90
           +G+GS G V          +L A+  L+K  ++  +E E   TE  ++ R +H  +V+L 
Sbjct: 1   LGKGSFGKVLL-VRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLH 59

Query: 91  GYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
            Y+ +  +K+ LV EY   G L   L    +      R   A +I   + YLH      I
Sbjct: 60  -YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAA-EIVLALEYLHSL---GI 114

Query: 150 IHCDIKPQNILMDE 163
           I+ D+KP+NIL+D 
Sbjct: 115 IYRDLKPENILLDA 128

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 52.8 bits (127), Expect = 1e-08
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 4/126 (3%)

Query: 37  GRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLLGYSLE 95
           G G+ G VYK       L A  ++ ++  E E E F  EI ++    H N+V L      
Sbjct: 14  GDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY 73

Query: 96  VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIK 155
            +K  ++ E+   G+L  I+   E+     +   + R +   + +LH     ++IH D+K
Sbjct: 74  ENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLK 130

Query: 156 PQNILM 161
             NIL+
Sbjct: 131 AGNILL 136

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 52.4 bits (126), Expect = 1e-08
 Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 15/138 (10%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKV-LDEREREFQT----EIKVIGRTHHRNLVR 88
           EK+G G+ GTV+K    NR+   +  L++V LD+ +    +    EI ++    H+N+VR
Sbjct: 6   EKIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 63

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           L        K  LV+EY  +  L       N +  P  ++       + +G+ + H    
Sbjct: 64  LYDVLHSDKKLTLVFEY-CDQDLKKYFDSCNGDIDPEIVK--SFMFQLLKGLAFCHSH-- 118

Query: 147 TQIIHCDIKPQNILMDEN 164
             ++H D+KPQN+L+++N
Sbjct: 119 -NVLHRDLKPQNLLINKN 135

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 14/136 (10%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQT---EIKVIGRTHHRNLVRL 89
           EK+G G+  TVYKG      ++VA+  +   LD  E    T   EI ++    H N+VRL
Sbjct: 6   EKLGEGTYATVYKGRNRTTGEIVALKEIH--LDAEEGTPSTAIREISLMKELKHENIVRL 63

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEK---QPNWIERTGIARDIARGILYLHDECE 146
                  +K +LV+EYM       +  +  +    PN ++       + +GI + H   E
Sbjct: 64  HDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVK--SFTYQLLKGIAFCH---E 118

Query: 147 TQIIHCDIKPQNILMD 162
            +++H D+KPQN+L++
Sbjct: 119 NRVLHRDLKPQNLLIN 134

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 52.7 bits (126), Expect = 2e-08
 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 10/134 (7%)

Query: 35  KVGRGSSGTVY--KGAMINRQLVAVNRLE---KVLDEREREFQTEIKVIGRTHHRNLVRL 89
           ++G GS G VY    +  N ++VAV ++    K  +E+ ++   E+K + +  H N +  
Sbjct: 28  EIGHGSFGAVYFATNSHTN-EVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEY 86

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
            G  L+     LV EY   GS +D+L   +K    +E   I     +G+ YLH      +
Sbjct: 87  KGCYLKEHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---M 142

Query: 150 IHCDIKPQNILMDE 163
           IH DIK  NIL+ E
Sbjct: 143 IHRDIKAGNILLTE 156

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 52.3 bits (125), Expect = 2e-08
 Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 4/136 (2%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGY 92
           E +G+G+ G V+KG + ++  VAV   ++ L  E + +F +E +++ +  H N+V+L+G 
Sbjct: 1   ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGV 60

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
             +     +V E +  G     L   + +    +    A D A G+ YL  +     IH 
Sbjct: 61  CTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHR 117

Query: 153 DIKPQNILMDENRCAK 168
           D+  +N L+ EN   K
Sbjct: 118 DLAARNCLVGENNVLK 133

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 52.4 bits (125), Expect = 2e-08
 Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 8/133 (6%)

Query: 35  KVGRGSSGTVYKGAMI-NRQLVAVNRLE---KVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           ++G GS G VY    + N ++VA+ ++    K  +E+ ++   E++ + +  H N ++  
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G  L      LV EY   GS +D+L   +K    +E   +     +G+ YLH      +I
Sbjct: 82  GCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMI 137

Query: 151 HCDIKPQNILMDE 163
           H D+K  NIL+ E
Sbjct: 138 HRDVKAGNILLSE 150

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 18/144 (12%)

Query: 34  EKVGRGSSGTVYKGAMINR---QLVAVNRLEKVL---DE--REREFQTEIKVIGRTHHRN 85
           +++G G+ G+VY     N+   +LVA+ +++K     +E    RE ++  K+     H N
Sbjct: 5   KQLGDGTFGSVYLA--RNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKL---NEHPN 59

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLHDE 144
           +V+L     E  +   V+EYM  G+L  ++ + + +P        I   I +G+ ++H  
Sbjct: 60  IVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK- 117

Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
                 H D+KP+N+L+      K
Sbjct: 118 --HGFFHRDLKPENLLVSGPEVVK 139

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 52.3 bits (125), Expect = 2e-08
 Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 30/164 (18%)

Query: 32  FKEKVGRGSSGTV----------YKGAMINRQ-----LVAVNRLEKVLDERER-EFQTEI 75
            KEK+G G  G V          + G           LVAV  L   + +  R +F  EI
Sbjct: 9   LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEI 68

Query: 76  KVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGI----- 130
           K++ R  + N++RLLG  +      ++ EYM NG L   L   E +  +     I     
Sbjct: 69  KIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSI 128

Query: 131 ------ARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
                 A  IA G+ YL        +H D+  +N L+  +   K
Sbjct: 129 ANLLYMAVQIASGMKYL---ASLNFVHRDLATRNCLVGNHYTIK 169

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 52.0 bits (124), Expect = 2e-08
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREF---QTEIKVIGRTHHRNLVRLL 90
           ++VG G+ G VYK   ++   +A  ++ K+  E   +F   Q EI ++    H N+V   
Sbjct: 15  QRVGSGTYGDVYKARNLHTGELAAVKIIKL--EPGDDFSLIQQEIFMVKECKHCNIVAYF 72

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G  L   K  +  EY   GSL DI ++     + ++   + R+  +G+ YLH + +   +
Sbjct: 73  GSYLSREKLWICMEYCGGGSLQDI-YHVTGPLSELQIAYVCRETLQGLAYLHSKGK---M 128

Query: 151 HCDIKPQNILMDEN 164
           H DIK  NIL+ +N
Sbjct: 129 HRDIKGANILLTDN 142

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 25/154 (16%)

Query: 32  FKEKVGRGSSGTVYKG-----AMINRQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRN 85
           F E++G  + G +YKG      M + QLVA+  L+ + + ++  EFQ E  ++   HH N
Sbjct: 9   FMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPN 68

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILF----------------NAEKQPNWIERTG 129
           +V LLG   +     +++EY++ G L + L                   +   +  +   
Sbjct: 69  IVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLH 128

Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMDE 163
           IA  IA G+ YL        +H D+  +NIL+ E
Sbjct: 129 IAIQIAAGMEYLSSHF---FVHKDLAARNILIGE 159

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 52.1 bits (125), Expect = 2e-08
 Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 35/163 (21%)

Query: 36  VGRGSSGTVYK----GAMINRQ--LVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVR 88
           +G+G+ G V++    G +      +VAV  L E+   + + +FQ E  ++    H N+V+
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG------------------- 129
           LLG         L++EYM+ G L + L    + P                          
Sbjct: 73  LLGVCAVGKPMCLLFEYMAYGDLNEFL--RHRSPRAQCSLSHSTSSARKCGLNPLPLSCT 130

Query: 130 ----IARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
               IA+ +A G+ YL    E + +H D+  +N L+ EN   K
Sbjct: 131 EQLCIAKQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVK 170

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 15/140 (10%)

Query: 34  EKVGRGSSGTVYKGAMINR-QLVAVNRLE--KVLDEREREFQ--------TEIKVIGRTH 82
           E +G+G+ G VY    +   +++AV ++E    +  R    Q        +EI+ +    
Sbjct: 7   ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD 66

Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH 142
           H N+V+ LG+        +  EY+  GS+   L    +    + R      +  G+ YLH
Sbjct: 67  HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRF-FTEQVLEGLAYLH 125

Query: 143 DECETQIIHCDIKPQNILMD 162
            +    I+H D+K  N+L+D
Sbjct: 126 SK---GILHRDLKADNLLVD 142

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 51.6 bits (124), Expect = 3e-08
 Identities = 40/161 (24%), Positives = 60/161 (37%), Gaps = 31/161 (19%)

Query: 32  FKEKVGRGSSGTVY---------------KGAMINRQ--LVAVNRLEKVLDERER-EFQT 73
           F EK+G G  G V+                         LVAV  L     +  R +F  
Sbjct: 9   FVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLK 68

Query: 74  EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG---- 129
           E+K++ R    N+ RLLG         ++ EYM NG L   L     + + +        
Sbjct: 69  EVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLS 128

Query: 130 ------IARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
                 +A  IA G+ YL        +H D+  +N L+ +N
Sbjct: 129 FSTLLYMATQIASGMRYLE---SLNFVHRDLATRNCLVGKN 166

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 51.3 bits (123), Expect = 4e-08
 Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 12/136 (8%)

Query: 36  VGRGSSGTVY------KGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL 89
           +G+G+ G VY       G  +  + V  +       +     + EI+++    H  +V+ 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 90  LGYSLEVSKKILVY-EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
            G  L   + + ++ EYM  GS+ D L         + R    R I  G+ YLH      
Sbjct: 70  YG-CLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRK-YTRQILEGVEYLHSN---M 124

Query: 149 IIHCDIKPQNILMDEN 164
           I+H DIK  NIL D  
Sbjct: 125 IVHRDIKGANILRDSA 140

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 51.3 bits (123), Expect = 4e-08
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 7/147 (4%)

Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           E+ + +     K+G G  G V++G   N   VAV  L K      ++F  E +++ +  H
Sbjct: 2   EIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRH 60

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN-AEKQPNWIERTGIARDIARGILYLH 142
             L++L           +V E M  GSL + L   A +     +   +A  +A G+ YL 
Sbjct: 61  PKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYL- 119

Query: 143 DECETQ-IIHCDIKPQNILMDENRCAK 168
              E Q  IH D+  +N+L+ EN   K
Sbjct: 120 ---EAQNYIHRDLAARNVLVGENNICK 143

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 51.2 bits (122), Expect = 4e-08
 Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 25/154 (16%)

Query: 36  VGRGSSGTVYKGAMINRQLVAVNRLEKVLDE-----REREFQTEIKVIGRT-HHRNLVRL 89
           +G G+ G V K A I +  + ++   K + E       R+F  E++V+ +  HH N++ L
Sbjct: 3   IGEGNFGQVLK-ARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 61

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNA---EKQPNWIERTG------------IARDI 134
           LG         L  EY  +G+L D L  +   E  P +                  A D+
Sbjct: 62  LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 121

Query: 135 ARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           ARG+ YL    + Q IH D+  +NIL+ EN  AK
Sbjct: 122 ARGMDYLS---QKQFIHRDLAARNILVGENYVAK 152

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 50.5 bits (121), Expect = 7e-08
 Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 6/135 (4%)

Query: 35  KVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           K+G GS+G V      +  + VAV +++    +R      E+ ++    H N+V +    
Sbjct: 26  KIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSY 85

Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
           L   +  +V E++  G+L DI+ +       I    +   + + + +LH +    +IH D
Sbjct: 86  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI--ATVCLAVLKALSFLHAQ---GVIHRD 140

Query: 154 IKPQNILMDENRCAK 168
           IK  +IL+  +   K
Sbjct: 141 IKSDSILLTSDGRVK 155

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 50.5 bits (120), Expect = 8e-08
 Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 8/133 (6%)

Query: 35  KVGRGSSGTVYKGAMI-NRQLVAVNRLE---KVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           ++G GS G VY    +   ++VA+ ++    K  +E+ ++   E+K + R  H N +   
Sbjct: 32  EIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYK 91

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G  L      LV EY   GS +D+L   +K    +E   I     +G+ YLH      +I
Sbjct: 92  GCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMI 147

Query: 151 HCDIKPQNILMDE 163
           H DIK  NIL+ E
Sbjct: 148 HRDIKAGNILLTE 160

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 49.9 bits (119), Expect = 1e-07
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 39/173 (22%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQ-----------------LVAVNRLEKVLDERER-EFQT 73
           FKEK+G G  G V+   ++N Q                 LVAV  L    ++  R +F  
Sbjct: 9   FKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLK 68

Query: 74  EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN---AEKQPNWIERTG- 129
           E+K++ R    N++RLLG  ++     ++ EYM NG L   L +    +K+ N  +    
Sbjct: 69  EVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPP 128

Query: 130 --------------IARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
                         +A  IA G+ YL        +H D+  +N L+ EN   K
Sbjct: 129 AHCLPAISYSSLLHVALQIASGMKYL---SSLNFVHRDLATRNCLVGENLTIK 178

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 50.0 bits (119), Expect = 1e-07
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 14/140 (10%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           +K+G G  G V+ G       VAV  L+      E  F  E +++ +  H  LV+L  Y+
Sbjct: 12  KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPE-SFLEEAQIMKKLRHDKLVQL--YA 68

Query: 94  LEVSKKI-LVYEYMSNGSLADILFNAE----KQPNWIERTGIARDIARGILYLHDECETQ 148
           +   + I +V EYMS GSL D L + E    K PN ++   +A  +A G+ Y+       
Sbjct: 69  VVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVD---MAAQVAAGMAYIE---RMN 122

Query: 149 IIHCDIKPQNILMDENRCAK 168
            IH D++  NIL+ +    K
Sbjct: 123 YIHRDLRSANILVGDGLVCK 142

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 49.7 bits (119), Expect = 1e-07
 Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 21/144 (14%)

Query: 35  KVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERERE-FQT----EIKVIGRTHHRNLVR 88
           K+G+G+ G V+K      +Q+VA   L+KVL E E+E F      EIK++    H N+V 
Sbjct: 19  KIGQGTFGEVFKARHKKTKQIVA---LKKVLMENEKEGFPITALREIKILQLLKHENVVN 75

Query: 89  LL--------GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILY 140
           L+         Y+       LV+E+  +  LA +L N   +    E   + + +  G+ Y
Sbjct: 76  LIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYY 134

Query: 141 LHDECETQIIHCDIKPQNILMDEN 164
           +H     +I+H D+K  NIL+ ++
Sbjct: 135 IH---RNKILHRDMKAANILITKD 155

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 49.6 bits (119), Expect = 1e-07
 Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 25/152 (16%)

Query: 36  VGRGSSGTVYKGAMINRQLVAVNRLEKV----------LDEREREFQTEIKVIGRTHHRN 85
           +G+GS G VY+G  + + +V      +V          + ER  EF  E  V+   +  +
Sbjct: 14  LGQGSFGMVYEG--LAKGVVKGEPETRVAIKTVNENASMRER-IEFLNEASVMKEFNCHH 70

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADIL---------FNAEKQPNWIERTGIARDIAR 136
           +VRLLG        ++V E M+ G L   L               P   +   +A +IA 
Sbjct: 71  VVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIAD 130

Query: 137 GILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           G+ YL      + +H D+  +N ++ E+   K
Sbjct: 131 GMAYLA---AKKFVHRDLAARNCMVAEDLTVK 159

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 10/140 (7%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL-----DEREREFQTEIKVIGRTHHRNLVR 88
           +++G G+ G+V KG  + +    V    K L        ++EF  E  V+ +  H  +VR
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           L+G        +LV E    G L   L    + P   +   +A  +A G+ YL       
Sbjct: 61  LIGVCKGEP-LMLVMELAPLGPLLKYLKKRREIPV-SDLKELAHQVAMGMAYLE---SKH 115

Query: 149 IIHCDIKPQNILMDENRCAK 168
            +H D+  +N+L+     AK
Sbjct: 116 FVHRDLAARNVLLVNRHQAK 135

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 49.2 bits (117), Expect = 2e-07
 Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 24/139 (17%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDERERE---FQT--EIKVIGRTHHRNLV 87
           EK+G GS  TVYKG + IN QLVA+    KV+  +  E   F    E  ++    H N+V
Sbjct: 11  EKLGEGSYATVYKGISRINGQLVAL----KVISMKTEEGVPFTAIREASLLKGLKHANIV 66

Query: 88  RLLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPNWIERTGIAR---DIARGILYLH 142
            L  + +  +K+ L  V+EYM      D+     + P  +    +      + RG+ Y+H
Sbjct: 67  LL--HDIIHTKETLTFVFEYMH----TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIH 120

Query: 143 DECETQIIHCDIKPQNILM 161
            +    I+H D+KPQN+L+
Sbjct: 121 GQ---HILHRDLKPQNLLI 136

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 15/129 (11%)

Query: 38  RGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV 96
           + S+G +Y   +I +  ++  N++++VL ER+        ++ +     +V+L  YS + 
Sbjct: 14  KKSTGDIYAIKVIKKADMIRKNQVDQVLTERD--------ILSQAQSPYVVKLY-YSFQG 64

Query: 97  SKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIK 155
            K + LV EY+  G LA +L N       + R  IA +I   + YLH      IIH D+K
Sbjct: 65  KKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIA-EIVLALEYLH---SNGIIHRDLK 120

Query: 156 PQNILMDEN 164
           P NIL+D N
Sbjct: 121 PDNILIDSN 129

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 48.8 bits (116), Expect = 2e-07
 Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 19/141 (13%)

Query: 34  EKVGRGSSGTVY--KGAMINRQLVAVN-RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           +K+G GS G +Y  K    +   V     L K+  + +   + E+ ++ +  H N+V   
Sbjct: 6   KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFF 65

Query: 91  GYSLEVSKKILVYEYMSNGSLAD-------ILFNAEKQPNWIERTGIARDIARGILYLHD 143
               E  +  +V EY   G L         +LF+ ++  +W  +      I+ G+ ++HD
Sbjct: 66  ASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQ------ISLGLKHIHD 119

Query: 144 ECETQIIHCDIKPQNILMDEN 164
               +I+H DIK QNI + +N
Sbjct: 120 R---KILHRDIKSQNIFLSKN 137

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 48.8 bits (116), Expect = 3e-07
 Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 8/138 (5%)

Query: 36  VGRGSSGTVYKGAMI---NRQL-VAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           +G G  G + +G +     R+L VA++ L     D++ R F  E   +G+  H N+VRL 
Sbjct: 13  LGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLE 72

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G     +  ++V EYMSNG+L   L   E Q    +  G+   +A G+ YL    E   +
Sbjct: 73  GVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYL---SEMGYV 129

Query: 151 HCDIKPQNILMDENRCAK 168
           H  +    +L++ +   K
Sbjct: 130 HKGLAAHKVLVNSDLVCK 147

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 48.8 bits (116), Expect = 3e-07
 Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 24/158 (15%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
            K ++G G+ G V+     N      + LVAV  L+       ++FQ E +++    H +
Sbjct: 9   LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 68

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSL--------ADILFNAEKQP-------NWIERTGI 130
           +V+  G   +    I+V+EYM +G L         D +   + QP          +   I
Sbjct: 69  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 128

Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           A  IA G++YL  +     +H D+  +N L+  N   K
Sbjct: 129 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVK 163

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 48.7 bits (117), Expect = 3e-07
 Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 26/151 (17%)

Query: 32  FKEKVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREF----QT---EIKVIGRTHH 83
             +K+G G+   VYK       ++VA+ +++  L ER+        T   EIK++    H
Sbjct: 4   KGKKLGEGTYAVVYKARDKETGRIVAIKKIK--LGERKEAKDGINFTALREIKLLQELKH 61

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSL------ADILFNAEKQPNWIERTGIARDIARG 137
            N++ LL      S   LV+E+M    L        I+       +++  T       RG
Sbjct: 62  PNIIGLLDVFGHKSNINLVFEFME-TDLEKVIKDKSIVLTPADIKSYMLMT------LRG 114

Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + YLH      I+H D+KP N+L+  +   K
Sbjct: 115 LEYLHSN---WILHRDLKPNNLLIASDGVLK 142

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 17/139 (12%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNR-LEKVLDEREREFQT-EIKVIGRTHHRNLVRLL 90
            K+G GS G V+K       Q+VA+ + +E   D   ++    EI+++ +  H NLV L+
Sbjct: 7   SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLI 66

Query: 91  GYSLEVSKKI----LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
               EV ++     LV+EY  +  L ++    EK P  +    I + I    L   + C 
Sbjct: 67  ----EVFRRKRKLHLVFEYCDHTVLNEL----EKNPRGVPEHLI-KKIIWQTLQAVNFCH 117

Query: 147 TQ-IIHCDIKPQNILMDEN 164
               IH D+KP+NIL+ + 
Sbjct: 118 KHNCIHRDVKPENILITKQ 136

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 48.7 bits (116), Expect = 3e-07
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 8/119 (6%)

Query: 53  QLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLLGYSLEVSKKI--LVYEYMSNG 109
           ++VAV  L++   ++    ++ EI ++   +H N+V+  G   E   K   L+ EY+  G
Sbjct: 34  EMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLG 93

Query: 110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           SL D L   + + N  +    A+ I  G+ YLH +     IH D+  +N+L+D +R  K
Sbjct: 94  SLRDYL--PKHKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVK 147

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 48.7 bits (116), Expect = 3e-07
 Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 11/137 (8%)

Query: 33  KEKVGRGSSGTVYKGA-MINRQLVAVNRLE-KVLDERER-EFQTEIKVIGRTHHRNLVRL 89
             K+G+GS G V+K     ++++ A+ +++   ++ RER E   E +V+ +     ++R 
Sbjct: 5   LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRY 64

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR---DIARGILYLHDECE 146
               L+  K  +V EY  NG L  +L     +P  +    + R    I  G+ +LH +  
Sbjct: 65  YESFLDKGKLNIVMEYAENGDLHKLLKMQRGRP--LPEDQVWRFFIQILLGLAHLHSK-- 120

Query: 147 TQIIHCDIKPQNILMDE 163
            +I+H DIK  N+ +D 
Sbjct: 121 -KILHRDIKSLNLFLDA 136

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 48.3 bits (115), Expect = 4e-07
 Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 26/144 (18%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKV-LD-EREREFQT---EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+ LD E E    T   EI ++   +H N+V+
Sbjct: 6   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 63

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIAR--------GILY 140
           LL      +K  LV+E++          + +K  +    +GI   + +        G+ +
Sbjct: 64  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAF 115

Query: 141 LHDECETQIIHCDIKPQNILMDEN 164
            H     +++H D+KPQN+L++  
Sbjct: 116 CHSH---RVLHRDLKPQNLLINTE 136

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 48.1 bits (114), Expect = 4e-07
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 5/137 (3%)

Query: 34  EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLG 91
           E++GRG+ G V+ G +  +   VAV    + L  + + +F  E +++ +  H N+VRL+G
Sbjct: 1   ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 60

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              +     +V E +  G     L     +    E   +  + A G+ YL  +     IH
Sbjct: 61  VCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH---CIH 117

Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N L+ E    K
Sbjct: 118 RDLAARNCLVTEKNVLK 134

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 48.3 bits (115), Expect = 4e-07
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 21/147 (14%)

Query: 34  EKVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDERERE-----FQTEIKVIGRTHHRN-L 86
           EK+G G+ G VYK    N  +LVA   L+K   E + E        EI ++        +
Sbjct: 7   EKIGEGTYGKVYKARDKNTGKLVA---LKKTRLEMDEEGIPPTALREISLLQMLSESIYI 63

Query: 87  VRLLG--YSLEVSKKI---LVYEYMSNGSLADILFNAEKQPNWIERTGIAR---DIARGI 138
           VRLL   +  E + K    LV+EY+ +     +  N       +    I      + +G+
Sbjct: 64  VRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGV 123

Query: 139 LYLHDECETQIIHCDIKPQNILMDENR 165
            + H      ++H D+KPQN+L+D+ +
Sbjct: 124 AHCHKH---GVMHRDLKPQNLLVDKQK 147

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 48.2 bits (114), Expect = 5e-07
 Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 14/136 (10%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQT--EIKVIGRTHHRNLVRLL 90
           EK+G GS  TVYKG + +N +LVA+ ++ ++ +E    F    E  ++    H N+V L 
Sbjct: 11  EKLGEGSYATVYKGKSKVNGKLVAL-KVIRLQEEEGTPFTAIREASLLKGLKHANIVLLH 69

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR---DIARGILYLHDECET 147
                     LV+EY+      D+    +K P  +    +      + RG+ Y+H   + 
Sbjct: 70  DIIHTKETLTLVFEYVH----TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIH---QR 122

Query: 148 QIIHCDIKPQNILMDE 163
            I+H D+KPQN+L+ +
Sbjct: 123 YILHRDLKPQNLLISD 138

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 48.1 bits (115), Expect = 5e-07
 Identities = 42/141 (29%), Positives = 58/141 (41%), Gaps = 10/141 (7%)

Query: 34  EKVGRGSSGTVYKGAMIN----RQLVAVNRLEK-VLDEREREFQTEIKVIGRTHHRNLVR 88
           +K+G GS G V +G           VAV  L+   L +   +F  E  ++    H NL+R
Sbjct: 1   KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIR 60

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER-TGIARDIARGILYLHDECET 147
           L G  L      +V E    GSL D L         I      A  IA G+ YL      
Sbjct: 61  LYGVVLTHPLM-MVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SK 116

Query: 148 QIIHCDIKPQNILMDENRCAK 168
           + IH D+  +NIL+  +   K
Sbjct: 117 RFIHRDLAARNILLASDDKVK 137

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 47.7 bits (113), Expect = 7e-07
 Identities = 34/151 (22%), Positives = 79/151 (52%), Gaps = 10/151 (6%)

Query: 33  KEKVGRGSSGTVYKGA-MINRQLVAVNRLE--KVLDERERE-FQTEIKVIGRTHHRNLVR 88
           ++K+GRG    VY+   +++R+ VA+ +++  +++D + R+    EI ++ + +H N+++
Sbjct: 7   EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIK 66

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR---DIARGILYLHDEC 145
            L   +E ++  +V E    G L+ ++   +KQ   I    + +    +   + ++H   
Sbjct: 67  YLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR- 125

Query: 146 ETQIIHCDIKPQNILMDENRCAKNFRLWIGK 176
             +++H DIKP N+ +      K   L +G+
Sbjct: 126 --RVMHRDIKPANVFITATGVVKLGDLGLGR 154

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 47.7 bits (114), Expect = 7e-07
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 14/137 (10%)

Query: 35  KVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDEREREFQT---EIKVIGRTHHRNLVR 88
            +GRG+ G VYK    N    +  A+ + +   ++     Q+   EI ++    H N+V 
Sbjct: 7   CIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVS 66

Query: 89  LLGYSLE-VSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR---DIARGILYLHD 143
           L+   LE   K + L+++Y  +     I F+ + +   I  + +      I  G+ YLH 
Sbjct: 67  LVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH- 125

Query: 144 ECETQIIHCDIKPQNIL 160
                ++H D+KP NIL
Sbjct: 126 --SNWVLHRDLKPANIL 140

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 47.7 bits (114), Expect = 8e-07
 Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 17/148 (11%)

Query: 35  KVGRGSSG----TVYKGAMINRQLVAVNR--LEKVLDEREREFQTEIKVIGRTHHRNLVR 88
            +G+         + K       LVAV +  L+    E  +  Q EI    +  H N++ 
Sbjct: 5   LIGKCFEDLMIVHLAK-HKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILP 63

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDEC 145
            +   +  S+  +V   M+ GS  D+L      P  +    IA   +D+   + Y+H + 
Sbjct: 64  YVTSFIVDSELYVVSPLMAYGSCEDLL--KTHFPEGLPELAIAFILKDVLNALDYIHSK- 120

Query: 146 ETQIIHCDIKPQNILMDENRCAK--NFR 171
               IH  +K  +IL+  +        R
Sbjct: 121 --GFIHRSVKASHILLSGDGKVVLSGLR 146

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 11/123 (8%)

Query: 59  RLEKVLDERER-EFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL--VYEYMSNGSLADIL 115
           R +   +E +R  F+ E  +  R +H N+V LL  S E    +L  V+EY+   +L ++L
Sbjct: 12  RTDAPEEEHQRARFRRETALCARLYHPNIVALLD-SGEAPPGLLFAVFEYVPGRTLREVL 70

Query: 116 FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM---DENRCAKNFRL 172
                 P   E   +   +   +   H++    I+H D+KPQNI++        AK    
Sbjct: 71  AADGALPA-GETGRLMLQVLDALACAHNQ---GIVHRDLKPQNIMVSQTGVRPHAKVLDF 126

Query: 173 WIG 175
            IG
Sbjct: 127 GIG 129

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 11/136 (8%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQT----EIKVIGRTHHRNLVR 88
            K+G G+ G VYK    +  ++VA+ +++  L             EIK++   +H N+++
Sbjct: 5   GKIGEGTYGVVYKARDKLTGEIVAIKKIK--LRFESEGIPKTALREIKLLKELNHPNIIK 62

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           LL          LV+E+M       I       P  + ++     + +G+ + H      
Sbjct: 63  LLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKS-YLYQLLQGLAFCH---SHG 118

Query: 149 IIHCDIKPQNILMDEN 164
           I+H D+KP+N+L++  
Sbjct: 119 ILHRDLKPENLLINTE 134

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 46.9 bits (111), Expect = 1e-06
 Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 8/137 (5%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           + +G+G  G V  G     + VAV  ++   D   + F  E  V+ +  H NLV+LLG  
Sbjct: 12  QTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 68

Query: 94  LEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIER-TGIARDIARGILYLHDECETQIIH 151
           +E    + +V EYM+ GSL D L +  +     +     + D+   + YL        +H
Sbjct: 69  VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVH 125

Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N+L+ E+  AK
Sbjct: 126 RDLAARNVLVSEDNVAK 142

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 46.9 bits (111), Expect = 1e-06
 Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 35  KVGRGSSGTVYKGAMINRQ---LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           ++G G+ G VYK    N++   L A   +E   +E   ++  EI+++   +H  +V+LLG
Sbjct: 19  ELGDGAFGKVYKAK--NKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLG 76

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
                 K  ++ E+   G++  I+   ++     +   I R +   + YLH     +IIH
Sbjct: 77  AFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIH 133

Query: 152 CDIKPQNILM 161
            D+K  N+L+
Sbjct: 134 RDLKAGNVLL 143

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 46.8 bits (111), Expect = 1e-06
 Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 31/165 (18%)

Query: 32  FKEKVGRGSSGTVY-----------------KGAMINRQLVAVNRLEKVLDERER-EFQT 73
           FKEK+G G  G V+                   +     LVAV  L +  ++  R +F  
Sbjct: 9   FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLK 68

Query: 74  EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGI- 130
           EIK++ R    N++RLL   +      ++ EYM NG L   L     ++     +   I 
Sbjct: 69  EIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTIS 128

Query: 131 -------ARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
                  A  IA G+ YL        +H D+  +N L+ +N   K
Sbjct: 129 YSTLIFMATQIASGMKYL---SSLNFVHRDLATRNCLVGKNYTIK 170

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 46.6 bits (110), Expect = 2e-06
 Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 27/150 (18%)

Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDER-----EREFQTEIKV 77
           ELK++     + +G G+ GTVYKG  +   + V +    K+L+E        EF  E  +
Sbjct: 8   ELKRV-----KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALI 62

Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    H +LVRLLG  L  + + LV + M +G L D +        ++   NW  +    
Sbjct: 63  MASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQ---- 117

Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G++YL    E +++H D+  +N+L+
Sbjct: 118 --IAKGMMYLE---ERRLVHRDLAARNVLV 142

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 20/146 (13%)

Query: 24  ELKKITDGFKEKVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKV 77
           +L+ I+D     +G G+ G+V K      G ++ +++V +     V  +  RE Q    +
Sbjct: 6   DLETISD-----LGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQ----I 56

Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG-IARDIAR 136
           +       +V   G  L  +   +  E+M  GSL  I    +  P  +E  G IA  +  
Sbjct: 57  MHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIY--KKGGPIPVEILGKIAVAVVE 114

Query: 137 GILYLHDECETQIIHCDIKPQNILMD 162
           G+ YL++    +I+H DIKP NIL++
Sbjct: 115 GLTYLYNV--HRIMHRDIKPSNILVN 138

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 13/133 (9%)

Query: 36  VGRGSSG--TVYKGAMINRQLV--AVNRLEKVLDEREREF-QTEIKVIGRTHHRNLVRLL 90
           +G+G+ G  T+Y+    +  +V   VN     L E+ER     EI ++    H N++   
Sbjct: 8   LGKGAFGEATLYRRTEDDSLVVWKEVNLTR--LSEKERRDALNEIVILSLLQHPNIIAYY 65

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR--DIARGILYLHDECETQ 148
            + ++ +  ++  EY + G+L D +   +K   + E   +     I   + Y+H   +  
Sbjct: 66  NHFMDDNTLLIEMEYANGGTLYDKI-VRQKGQLFEEEMVLWYLFQIVSAVSYIH---KAG 121

Query: 149 IIHCDIKPQNILM 161
           I+H DIK  NI +
Sbjct: 122 ILHRDIKTLNIFL 134

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 32/145 (22%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVN--RLEKVLDE-------REREFQTEIKVIGRTHH 83
           +K+G GS  TVYKG + +  QLVA+   RLE   +E       RE     ++K      H
Sbjct: 11  DKLGEGSYATVYKGRSKLTGQLVALKEIRLEH--EEGAPFTAIREASLLKDLK------H 62

Query: 84  RNLVRLLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPNWIERTGIAR---DIARGI 138
            N+V L  + +  +KK L  V+EY+      D+    +     +    +      + RG+
Sbjct: 63  ANIVTL--HDIIHTKKTLTLVFEYLDT----DLKQYMDDCGGGLSMHNVRLFLFQLLRGL 116

Query: 139 LYLHDECETQIIHCDIKPQNILMDE 163
            Y H     +++H D+KPQN+L+ E
Sbjct: 117 AYCHQR---RVLHRDLKPQNLLISE 138

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 46.2 bits (109), Expect = 2e-06
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 6/129 (4%)

Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL-GY 92
           ++G G+ G VYK       ++A  ++     E E E +  EI ++    H N+V+LL  +
Sbjct: 12  ELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 71

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
             E +  IL+ E+ + G++  ++   E+     +   + +     + YLH   E +IIH 
Sbjct: 72  YYENNLWILI-EFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH---ENKIIHR 127

Query: 153 DIKPQNILM 161
           D+K  NIL 
Sbjct: 128 DLKAGNILF 136

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 19/158 (12%)

Query: 20  FSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQ---LVAVNRLEKVLDERE-REFQTEI 75
           F+  +LK        ++GRG+ GTV K  M+++    ++AV R+   +DE+E +    ++
Sbjct: 1   FTAEDLKD-----LGEIGRGAFGTVNK--MLHKPSGTIMAVKRIRSTVDEKEQKRLLMDL 53

Query: 76  KVIGRTHH-RNLVRLLGYSLEVSKKILVYEYM--SNGSLADILFNAEKQPNWIERT--GI 130
            V+ R+     +V+  G         +  E M  S       ++   K     E     I
Sbjct: 54  DVVMRSSDCPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKS-VIPEEILGKI 112

Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           A    + + YL +E   +IIH D+KP NIL+D N   K
Sbjct: 113 AVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIK 148

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 45.8 bits (108), Expect = 3e-06
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)

Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 13  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 69

Query: 95  EVSKKI-LVYEYMSNGSLADILFNAE----KQPNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS GSL D L        + P  ++   +A  IA G+ Y+        
Sbjct: 70  VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 123

Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 124 VHRDLRAANILVGENLVCK 142

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 45.4 bits (107), Expect = 4e-06
 Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 6/128 (4%)

Query: 35  KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           K+G GS+G V      +  + VAV +++    +R      E+ ++   HH N+V +    
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY 88

Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
           L   +  +V E++  G+L DI+ +       I    +   + R + YLH++    +IH D
Sbjct: 89  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI--ATVCLSVLRALSYLHNQ---GVIHRD 143

Query: 154 IKPQNILM 161
           IK  +IL+
Sbjct: 144 IKSDSILL 151

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 45.5 bits (108), Expect = 4e-06
 Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 30/160 (18%)

Query: 34  EKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVLDERE-REFQTEI---KVIGRTHH 83
           + +G G+ G V K   +          VAV  L+    E++  +  +E+   K+IG+  H
Sbjct: 18  KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 75

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIERT 128
           +N++ LLG   +     +V EY ++G+L D L                  E+     +  
Sbjct: 76  KNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLV 135

Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             A  +ARG+ +L  +   + IH D+  +N+L+ E+   K
Sbjct: 136 SFAYQVARGMEFLASK---KCIHRDLAARNVLVTEDHVMK 172

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 45.2 bits (107), Expect = 5e-06
 Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 10/133 (7%)

Query: 36  VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT--EIKVIGRTHHRNLVRLLGY 92
           VG G+ G V      +  Q VA+ ++ K         +T  E+K++    H N++ L   
Sbjct: 18  VGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDI 77

Query: 93  SLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
            +   + I  V E +    L  +L +   +  +I+       I RG+ Y+H      ++H
Sbjct: 78  FISPLEDIYFVTELLGT-DLHRLLTSRPLEKQFIQY--FLYQILRGLKYVH---SAGVVH 131

Query: 152 CDIKPQNILMDEN 164
            D+KP NIL++EN
Sbjct: 132 RDLKPSNILINEN 144

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 45.0 bits (107), Expect = 5e-06
 Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 30/143 (20%)

Query: 36  VGRGSSGTVYK---------GAM--INRQL-VAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           +G+G+ G V            AM  +N+Q  V    +  VL   ER    E+       H
Sbjct: 8   IGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVL--NERRILQELN------H 59

Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGILY 140
             LV L  YS +  + + LV + +  G   D+ ++  ++  + E        +I   + Y
Sbjct: 60  PFLVNLW-YSFQDEENMYLVVDLLLGG---DLRYHLSQKVKFSEEQVKFWICEIVLALEY 115

Query: 141 LHDECETQIIHCDIKPQNILMDE 163
           LH      IIH DIKP NIL+DE
Sbjct: 116 LH---SKGIIHRDIKPDNILLDE 135

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 45.1 bits (107), Expect = 6e-06
 Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 5/62 (8%)

Query: 104 EYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD 162
           E+M  GSL  +L  A + P N + +  IA  + RG+ YL ++   +I+H D+KP NIL++
Sbjct: 79  EHMDGGSLDQVLKKAGRIPENILGKISIA--VLRGLTYLREK--HKIMHRDVKPSNILVN 134

Query: 163 EN 164
             
Sbjct: 135 SR 136

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 44.8 bits (106), Expect = 6e-06
 Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 29/146 (19%)

Query: 36  VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERERE-FQT----EIKVIGRTHHRNLVRL 89
           +G G+ G VYK       +LVA   L+KV  + E+E F      EIK++ + +HRN+V L
Sbjct: 15  IGEGTYGQVYKARDKDTGELVA---LKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNL 71

Query: 90  LGY------SLEVSKK----ILVYEYMSN---GSLADILFNAEKQPNWIERTGIARDIAR 136
                    +L+  K      LV+EYM +   G L   L +  +           + +  
Sbjct: 72  KEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHI----KSFMKQLLE 127

Query: 137 GILYLHDECETQIIHCDIKPQNILMD 162
           G+ Y H       +H DIK  NIL++
Sbjct: 128 GLNYCHK---KNFLHRDIKCSNILLN 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 45.2 bits (107), Expect = 7e-06
 Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 49/173 (28%)

Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREF-QTEIKVIGRTHHRNLVR----- 88
           K+G G+ G VYK +++N+Q     +  K + ++  E+   EI +  R      VR     
Sbjct: 139 KLGEGAFGVVYKASLVNKQS---KKEGKYVLKKATEYGAVEIWMNER------VRRACPN 189

Query: 89  -----LLGYSLEVSKK-----ILVYEYMSNGSLADIL------FNAEK--------QPNW 124
                + G+   VS K      LV+ Y    +LAD++      +N E          P  
Sbjct: 190 SCADFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKG 249

Query: 125 IERTG-IARDIARGILY----LHDECETQIIHCDIKPQNILMDENRCAKNFRL 172
           +ER   I + I R IL+    LH    T I+H D+KPQNI+  E   + +F++
Sbjct: 250 LERENKIIQTIMRQILFALDGLHS---TGIVHRDVKPQNIIFSEG--SGSFKI 297

Length = 566

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 44.6 bits (105), Expect = 8e-06
 Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 11/134 (8%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           +K+G G  G V+ G   N   VAV  L K      + F  E  ++    H  LVRL    
Sbjct: 12  KKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 70

Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
            +     ++ EYM+ GSL D L + E      P  I+    +  IA G+ Y+        
Sbjct: 71  TKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLID---FSAQIAEGMAYIE---RKNY 124

Query: 150 IHCDIKPQNILMDE 163
           IH D++  N+L+ E
Sbjct: 125 IHRDLRAANVLVSE 138

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 44.2 bits (104), Expect = 9e-06
 Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 6/128 (4%)

Query: 35  KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           K+G GS+G V    + +  +LVAV +++    +R      E+ ++    H N+V +    
Sbjct: 27  KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86

Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
           L   +  +V E++  G+L DI+ +       I    +A  + + +  LH +    +IH D
Sbjct: 87  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA--VLKALSVLHAQ---GVIHRD 141

Query: 154 IKPQNILM 161
           IK  +IL+
Sbjct: 142 IKSDSILL 149

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 44.4 bits (105), Expect = 9e-06
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 20/148 (13%)

Query: 34  EKVGRGSSGTVYK-------GAMINRQLVAVNRLEKVLDERERE-----FQTEIKVIGRT 81
           E +G G+ G VYK         ++  + + V+      D+RER+       +E+ +I   
Sbjct: 6   EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ 65

Query: 82  -HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNA--EKQPNWIERT--GIARDIAR 136
             H N+VR     LE  +  +V + +    L +  FN+  EK+  + E     I   +  
Sbjct: 66  LRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGE-HFNSLKEKKQRFTEERIWNIFVQMVL 124

Query: 137 GILYLHDECETQIIHCDIKPQNILMDEN 164
            + YLH E   +I+H D+ P NI++ E+
Sbjct: 125 ALRYLHKE--KRIVHRDLTPNNIMLGED 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 22/156 (14%)

Query: 36  VGRGSSGTVYKGAM----INRQLVAVNRLE-KVLDERE-REFQTEIKVIGRTHHRNLVRL 89
           +G G  G+V +G +     ++  VAV  ++  +    E  EF +E   +    H N+++L
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 90  LGYSLEVSKK------ILVYEYMSNGSLADILFNA--EKQPNWIERTGIAR---DIARGI 138
           +G   E S        +++  +M +G L   L  +     P  +    + +   DIA G+
Sbjct: 67  IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126

Query: 139 LYLHDECETQIIHCDIKPQNILMDENR--CAKNFRL 172
            YL +      IH D+  +N ++ E+   C  +F L
Sbjct: 127 EYLSNR---NFIHRDLAARNCMLREDMTVCVADFGL 159

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 43.8 bits (103), Expect = 1e-05
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 8/135 (5%)

Query: 34  EKVGRGSSGTVYK-GAMINRQLVAVNRLEKVLDEREREFQTEIKVI-GRTHHRNLVRLLG 91
           E +G+G+ G V+K     N    AV  L+ + D  E E + E  ++   + H N+V+  G
Sbjct: 24  ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDE-EIEAEYNILKALSDHPNVVKFYG 82

Query: 92  YSLEVSKKI-----LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
              +   K      LV E  + GS+ D++    K+   +E   IA  +   ++ L     
Sbjct: 83  MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV 142

Query: 147 TQIIHCDIKPQNILM 161
            + IH D+K  NIL+
Sbjct: 143 NKTIHRDVKGNNILL 157

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 14/140 (10%)

Query: 32  FKEKVGRGSSGTV----YKGAMINRQLVAVNRLEK--VLDERERE-FQTEIKVIGRTHHR 84
           F + +G GS G V    +KG   + +  A+  L K  ++  ++ E    E +++    H 
Sbjct: 5   FIKTLGTGSFGRVMLVRHKG---SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHP 61

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
            LV L G   + S   LV EY+  G L   L  + + P  + R   A  +   + YLH  
Sbjct: 62  FLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAA-QVVLALEYLHSL 120

Query: 145 CETQIIHCDIKPQNILMDEN 164
               I++ D+KP+N+L+D +
Sbjct: 121 ---DIVYRDLKPENLLLDSD 137

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 43.9 bits (103), Expect = 1e-05
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 14/139 (10%)

Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +++ +  H  LV L  Y++
Sbjct: 13  KLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPE-AFLQEAQIMKKLRHDKLVPL--YAV 69

Query: 95  EVSKKI-LVYEYMSNGSLADILFNAE----KQPNWIERTGIARDIARGILYLHDECETQI 149
              + I +V E+M  GSL D L   +    K P  ++   +A  IA G+ Y+        
Sbjct: 70  VSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVD---MAAQIADGMAYIE---RMNY 123

Query: 150 IHCDIKPQNILMDENRCAK 168
           IH D++  NIL+ +N   K
Sbjct: 124 IHRDLRAANILVGDNLVCK 142

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 45/153 (29%)

Query: 36  VGRGSSGTVYKGAMINR--QLVAVNRLEKVLDERE---REFQTEIKVIGRTHHRNLVRLL 90
           +G G+ G V   A+  R  + VA+ ++  V D+     R  + EIK++    H N++ LL
Sbjct: 8   IGSGAYGVVCS-AVDKRTGRKVAIKKISNVFDDLIDAKRILR-EIKLLRHLRHENIIGLL 65

Query: 91  -----GYSLEVSKKILVYEYM---------SNGSLAD-----ILFNAEKQPNWIERTGIA 131
                    + +   +V E M         S   L D      L+               
Sbjct: 66  DILRPPSPEDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQ-------------- 111

Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
             I RG+ YLH      +IH D+KP NIL++ N
Sbjct: 112 --ILRGLKYLH---SANVIHRDLKPSNILVNSN 139

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 47/162 (29%)

Query: 25  LKKITDGFKEKVGRGSSGTVY-----------------KGAMINRQLVAVNRLEKVLDER 67
            KKI     + +G+G  G V+                 K  MI R     N++++VL E+
Sbjct: 3   FKKI-----KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKR-----NKVKRVLTEQ 52

Query: 68  EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIE 126
           E        ++    H  L  L   S +    + LV +Y   G L  +L   ++QP    
Sbjct: 53  E--------ILATLDHPFLPTLYA-SFQTETYLCLVMDYCPGGELFRLL---QRQPGKCL 100

Query: 127 RTGIARDIARGIL----YLHDECETQIIHCDIKPQNILMDEN 164
              +AR  A  +L    YLH      I++ D+KP+NIL+ E+
Sbjct: 101 SEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHES 139

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 15/135 (11%)

Query: 35  KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
           ++G G+ G V K      G ++ R+L+ +     + ++  RE Q    V+   +   +V 
Sbjct: 12  ELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 67

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
             G      +  +  E+M  GSL  +L  A++ P  I  +  IA  + RG+ YL ++   
Sbjct: 68  FYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREK--H 123

Query: 148 QIIHCDIKPQNILMD 162
           QI+H D+KP NIL++
Sbjct: 124 QIMHRDVKPSNILVN 138

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 21/155 (13%)

Query: 36  VGRGSSGTVYKGAMINRQL---VAVNRLEKVLDERER--EFQTEIKVIGRTHHRNLVRLL 90
           +G G  G+V +G +        VAV  ++  +  R    +F +E   +    H N++RL+
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 91  GYSLEVSKK------ILVYEYMSNGSLADILFNAE--KQPNWIERTGIAR---DIARGIL 139
           G  L+  +       +++  +M +G L   L  +     P ++    + +   DIA G+ 
Sbjct: 67  GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126

Query: 140 YLHDECETQIIHCDIKPQNILMDENR--CAKNFRL 172
           YL  +     IH D+  +N +++EN   C  +F L
Sbjct: 127 YLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 10/135 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHRNLVR 88
           F +++G G  G V+ G    +  VA+    K ++E    E +F  E KV+ +  H  LV+
Sbjct: 8   FMKELGSGQFGVVHLGKWRAQIKVAI----KAINEGAMSEEDFIEEAKVMMKLSHPKLVQ 63

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           L G   +     +V E+M NG L + L   + + +      + +D+  G+ YL       
Sbjct: 64  LYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE---RNS 120

Query: 149 IIHCDIKPQNILMDE 163
            IH D+  +N L+  
Sbjct: 121 FIHRDLAARNCLVSS 135

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 12/137 (8%)

Query: 36  VGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQ---TEIKVIGRTHHRNLVRLLG 91
           +G+G  G V    M    +L A  +L K   ++ + ++    E +++ + H R +V L  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSL-A 59

Query: 92  YSLEVSKKI-LVYEYMSNGSLADILFNA-EKQPNWIERTGI--ARDIARGILYLHDECET 147
           Y+ +    + LV   M+ G L   ++N  E+ P + E         I  G+ +LH   + 
Sbjct: 60  YAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QR 116

Query: 148 QIIHCDIKPQNILMDEN 164
           +II+ D+KP+N+L+D +
Sbjct: 117 RIIYRDLKPENVLLDND 133

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 42.6 bits (100), Expect = 3e-05
 Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 19/150 (12%)

Query: 35  KVGRGSSGTVYKGA---MINRQL---VAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLV 87
           ++G+GS G VY+G    +I  +    VAV  + +    RER EF  E  V+      ++V
Sbjct: 13  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 72

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILF----NAEKQ-----PNWIERTGIARDIARGI 138
           RLLG   +    ++V E M++G L   L      AE       P   E   +A +IA G+
Sbjct: 73  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 132

Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
            YL+ +   + +H D+  +N ++  +   K
Sbjct: 133 AYLNAK---KFVHRDLAARNCMVAHDFTVK 159

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 42.5 bits (100), Expect = 4e-05
 Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 15/138 (10%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLE------KVLDEREREFQTEI----KVIGRTHH 83
           E +G+G+   ++KG  I R++     L       KVLD+  R +         ++ +  H
Sbjct: 1   ESLGQGTFTKIFKG--IRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSH 58

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
           ++LV   G  +   + I+V EY+  GSL   L   +   N   +  +A+ +A  + +L D
Sbjct: 59  KHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLED 118

Query: 144 ECETQIIHCDIKPQNILM 161
           +    + H ++  +N+L+
Sbjct: 119 K---GLTHGNVCAKNVLL 133

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 42.7 bits (100), Expect = 4e-05
 Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 12/137 (8%)

Query: 34  EKVGRGSSGTVYKGAMINRQ---LVAVNRLEKVLDEREREFQTEIKVI-GRTHHRNLVRL 89
           E +G+G+ G VYK  + N++   L AV  L+ + D  E E + E  ++    +H N+V+ 
Sbjct: 28  ETIGKGTYGKVYK--VTNKKDGSLAAVKILDPISDVDE-EIEAEYNILQSLPNHPNVVKF 84

Query: 90  LGYSLEVSKKI-----LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
            G   +  K +     LV E  + GS+ +++         ++   I+  +   +L L   
Sbjct: 85  YGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHL 144

Query: 145 CETQIIHCDIKPQNILM 161
              +IIH D+K  NIL+
Sbjct: 145 HNNRIIHRDVKGNNILL 161

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 42.3 bits (99), Expect = 5e-05
 Identities = 32/148 (21%), Positives = 73/148 (49%), Gaps = 4/148 (2%)

Query: 33  KEKVGRGSSGTVYKGA-MINRQLVAVNRLE--KVLDERER-EFQTEIKVIGRTHHRNLVR 88
           ++K+GRG    VY+   +++   VA+ +++   ++D + R +   EI ++ + +H N+++
Sbjct: 7   EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK 66

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
                +E ++  +V E    G L+ ++ + +KQ   I    + +   +    L      +
Sbjct: 67  YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR 126

Query: 149 IIHCDIKPQNILMDENRCAKNFRLWIGK 176
           ++H DIKP N+ +      K   L +G+
Sbjct: 127 VMHRDIKPANVFITATGVVKLGDLGLGR 154

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 41.7 bits (98), Expect = 7e-05
 Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 16/136 (11%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDERE-REFQTEIKVIGRTHH---RNLVR 88
           E +GRG+ G VY+G  +   ++VA+  +     + +  + Q E+ ++ +       N+ +
Sbjct: 7   ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITK 66

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDEC 145
             G  L+  +  ++ EY   GS+  ++     +   I    I+   R++   + Y+H   
Sbjct: 67  YYGSYLKGPRLWIIMEYAEGGSVRTLM-----KAGPIAEKYISVIIREVLVALKYIH--- 118

Query: 146 ETQIIHCDIKPQNILM 161
           +  +IH DIK  NIL+
Sbjct: 119 KVGVIHRDIKAANILV 134

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 41.9 bits (98), Expect = 7e-05
 Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 21/159 (13%)

Query: 26  KKITDGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERER-EFQTEIKVI 78
           +KIT     ++G+GS G VY+G             VA+  + +    RER EF  E  V+
Sbjct: 6   EKIT--MSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 63

Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN---------AEKQPNWIERTG 129
              +  ++VRLLG   +    +++ E M+ G L   L +          +  P+  +   
Sbjct: 64  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQ 123

Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           +A +IA G+ YL+     + +H D+  +N ++ E+   K
Sbjct: 124 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVK 159

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 41.6 bits (97), Expect = 8e-05
 Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 19/148 (12%)

Query: 24  ELKKITDGFKE--KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEI 75
           ELK   D F++  ++G G+ G V+K      G ++ R+L+ +     + ++  RE Q   
Sbjct: 1   ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQ--- 55

Query: 76  KVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDI 134
            V+   +   +V   G      +  +  E+M  GSL  +L  A + P  I  +  IA  +
Sbjct: 56  -VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--V 112

Query: 135 ARGILYLHDECETQIIHCDIKPQNILMD 162
            +G+ YL ++   +I+H D+KP NIL++
Sbjct: 113 IKGLTYLREK--HKIMHRDVKPSNILVN 138

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 15/138 (10%)

Query: 34  EKVGRGSSGTVYKG---AMINRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRL 89
           +++G G  G V  G     +++  V V  L       E+  F  E++     +H N+++ 
Sbjct: 1   DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQC 60

Query: 90  LGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIARDIARGILYLHD 143
           LG  +E    +LV E+   G L + L           Q + ++R  +A ++A G+L+LH 
Sbjct: 61  LGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQR--MACEVASGLLWLH- 117

Query: 144 ECETQIIHCDIKPQNILM 161
             +   IH D+  +N  +
Sbjct: 118 --QADFIHSDLALRNCQL 133

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 19/143 (13%)

Query: 34  EKVGRGSSGTVYKGAM---INRQLVAVNRLE---KVLDEREREFQTEIKVIGRTHHRNLV 87
           +++G G  G V  G +        V V  L     V ++ +  F  E +      H NL+
Sbjct: 1   KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMK--FLEEAQPYRSLQHSNLL 58

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEK------QPNWIERTGIARDIARGILYL 141
           + LG   EV+  +LV E+   G L   L +  K       P  ++R  +A +IA G+L+L
Sbjct: 59  QCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQR--MACEIALGLLHL 116

Query: 142 HDECETQIIHCDIKPQNILMDEN 164
           H   +   IH D+  +N L+  +
Sbjct: 117 H---KNNFIHSDLALRNCLLTAD 136

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 41.2 bits (96), Expect = 1e-04
 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 8/129 (6%)

Query: 35  KVGRGSSGTV--YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           K+G GS+G V   +     RQ VAV  ++    +R      E+ ++    H+N+V +   
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQ-VAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKS 86

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            L   +  ++ E++  G+L DI+  ++ + N  +   +   + + + YLH +    +IH 
Sbjct: 87  YLVGEELWVLMEFLQGGALTDIV--SQTRLNEEQIATVCESVLQALCYLHSQ---GVIHR 141

Query: 153 DIKPQNILM 161
           DIK  +IL+
Sbjct: 142 DIKSDSILL 150

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 32/146 (21%)

Query: 33  KEKVGRGSSGTVYKGAMINR---QLVAVNRLEKVLD------EREREFQTEIKVIGR-TH 82
            +K+G+G+ G V+K   I+R   ++VA   L+K+ D      + +R F+ EI  +     
Sbjct: 12  LQKLGKGAYGIVWKA--IDRRTKEVVA---LKKIFDAFRNATDAQRTFR-EIMFLQELGD 65

Query: 83  HRNLVRLLG-YSLEVSKKI-LVYEYM----SNGSLADILFNAEKQPNWIERTGIARDIAR 136
           H N+V+LL     E  K I LV+EYM         A+IL +  K+        I   + +
Sbjct: 66  HPNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRANILEDVHKR-------YIMYQLLK 118

Query: 137 GILYLHDECETQIIHCDIKPQNILMD 162
            + Y+H      +IH D+KP NIL++
Sbjct: 119 ALKYIH---SGNVIHRDLKPSNILLN 141

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 32/133 (24%), Positives = 71/133 (53%), Gaps = 10/133 (7%)

Query: 32  FKEKVGRGSSGTVYKG-AMINRQLVAVNRLE-KVLDEREREFQTEIKVIGRTHHRNLVRL 89
           ++E +G G+ GTVYK   ++ R+++AV  +   +  E +++  +E++++ +     ++  
Sbjct: 5   YQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGF 64

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
            G     ++  +  E+M  GSL D+     +    + R  +A  + +G+ YL      +I
Sbjct: 65  YGAFFVENRISICTEFMDGGSL-DVYRKIPEHV--LGRIAVA--VVKGLTYLWS---LKI 116

Query: 150 IHCDIKPQNILMD 162
           +H D+KP N+L++
Sbjct: 117 LHRDVKPSNMLVN 129

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 40.7 bits (95), Expect = 2e-04
 Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 15/135 (11%)

Query: 36  VGRGSSGTVYKGA-MINRQLVAVNRLEK--VLDERERE-FQTEIKVIGRT-HHRNLVRLL 90
           +G+GS G V       +    AV  L+K  +L ++E+     E  V+ +   H  LV L 
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGL- 61

Query: 91  GYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGILYLHDECET 147
            YS + ++K+  V +Y++ G L    F+ +++  ++E      A ++A  I YLH     
Sbjct: 62  HYSFQTAEKLYFVLDYVNGGEL---FFHLQRERCFLEPRARFYAAEVASAIGYLHSL--- 115

Query: 148 QIIHCDIKPQNILMD 162
            II+ D+KP+NIL+D
Sbjct: 116 NIIYRDLKPENILLD 130

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 20/144 (13%)

Query: 32  FKEKVGRGSSGTVYKG-------AMINRQLVAVNRLEKVLDERE-REFQTEIKVIGRTHH 83
             +++G+G+ G+VYK         M  +++    RLE  LDE +  +   E+ ++ +   
Sbjct: 5   VLDELGKGNYGSVYKVLHRPTGVTMAMKEI----RLE--LDESKFNQIIMELDILHKAVS 58

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIAR---GILY 140
             +V   G         +  EYM  GSL D L+        I    + R       G+ +
Sbjct: 59  PYIVDFYGAFFIEGAVYMCMEYMDAGSL-DKLYAGGVATEGIPEDVLRRITYAVVKGLKF 117

Query: 141 LHDECETQIIHCDIKPQNILMDEN 164
           L +E    IIH D+KP N+L++ N
Sbjct: 118 LKEE--HNIIHRDVKPTNVLVNGN 139

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 40.7 bits (95), Expect = 2e-04
 Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 33/163 (20%)

Query: 36  VGRGSSGTVYKGAMINRQ------LVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNLVR 88
           +G G  G V K      +       VAV  L++     E R+  +E  ++ + +H ++++
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEK-QPNWIERTG------------------ 129
           L G   +    +L+ EY   GSL   L  + K  P+++   G                  
Sbjct: 68  LYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMG 127

Query: 130 ----IARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
                A  I+RG+ YL    E +++H D+  +N+L+ E R  K
Sbjct: 128 DLISFAWQISRGMQYL---AEMKLVHRDLAARNVLVAEGRKMK 167

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 14/136 (10%)

Query: 36  VGRGSSGTVY--KGAMINRQLVAVNRLEKVLDERERE-----FQTEIKVIGRTHHRNLVR 88
           +G+G+ G VY    A   R+L AV +++   +  E        + EI+++    H  +V+
Sbjct: 10  LGQGAFGRVYLCYDADTGREL-AVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQ 68

Query: 89  LLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
             G   +  ++ L    E+M  GS+ D L +       + R    R I  G+ YLH    
Sbjct: 69  YYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRK-YTRQILEGVSYLH---S 124

Query: 147 TQIIHCDIKPQNILMD 162
             I+H DIK  NIL D
Sbjct: 125 NMIVHRDIKGANILRD 140

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 15/135 (11%)

Query: 36  VGRGSSGTVYKGA-MINRQLVAVNRLEK--VLDERE-REFQTEIKV-IGRTHHRNLVRLL 90
           +G+GS G V       + +  AV  L+K  +L ++E +    E  V +    H  LV L 
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGL- 61

Query: 91  GYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGILYLHDECET 147
            YS + + K+  V +Y++ G L    F+ +++ ++ E      A +IA  + YLH     
Sbjct: 62  HYSFQTADKLYFVLDYVNGGEL---FFHLQRERSFPEPRARFYAAEIASALGYLH---SL 115

Query: 148 QIIHCDIKPQNILMD 162
            II+ D+KP+NIL+D
Sbjct: 116 NIIYRDLKPENILLD 130

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 10/134 (7%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQT---EIKVIGRTHHRNLVRL 89
           +K+G G+  TV+KG + +   LVA+  +   L+  E    T   E+ ++    H N+V L
Sbjct: 11  DKLGEGTYATVFKGRSKLTENLVALKEIR--LEHEEGAPCTAIREVSLLKNLKHANIVTL 68

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
                      LV+EY+ +  L   L N     +          + RG+ Y H   + +I
Sbjct: 69  HDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH---KRKI 124

Query: 150 IHCDIKPQNILMDE 163
           +H D+KPQN+L++E
Sbjct: 125 LHRDLKPQNLLINE 138

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 10/134 (7%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQT---EIKVIGRTHHRNLVRL 89
           +K+G G+  TVYKG + +   LVA+  +   L+  E    T   E+ ++    H N+V L
Sbjct: 12  DKLGEGTYATVYKGRSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDLKHANIVTL 69

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
                      LV+EY+ +  L   L +     N          + RG+ Y H     ++
Sbjct: 70  HDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KV 125

Query: 150 IHCDIKPQNILMDE 163
           +H D+KPQN+L++E
Sbjct: 126 LHRDLKPQNLLINE 139

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 12/135 (8%)

Query: 36  VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQ---TEIKVIGRTHHRNLVRLLG 91
           +G+G  G V    +    ++ A  +L+K   ++ +  Q    E K++ +   R +V L  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSL-A 59

Query: 92  YSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGI--ARDIARGILYLHDECETQ 148
           Y+ E    + LV   M+ G L   ++N   +P + E   I  A  I  G+ +LH     +
Sbjct: 60  YAFETKDDLCLVMTLMNGGDLKYHIYNVG-EPGFPEARAIFYAAQIICGLEHLHQR---R 115

Query: 149 IIHCDIKPQNILMDE 163
           I++ D+KP+N+L+D+
Sbjct: 116 IVYRDLKPENVLLDD 130

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 8/139 (5%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDERE-REFQTEIKVIGRTHH-RNLVRLL 90
            ++G G+ G VYK        ++AV ++ +  ++ E +    ++ V+ ++H    +V+  
Sbjct: 21  GEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCY 80

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG-IARDIARGILYLHDECETQI 149
           GY +  S   +  E MS  +  D L    + P   +  G +   I + + YL ++    +
Sbjct: 81  GYFITDSDVFICMELMS--TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK--HGV 136

Query: 150 IHCDIKPQNILMDENRCAK 168
           IH D+KP NIL+D +   K
Sbjct: 137 IHRDVKPSNILLDASGNVK 155

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 14/136 (10%)

Query: 36  VGRGSSGTVY--KGAMINRQLVAVNRLEKVLDERERE-----FQTEIKVIGRTHHRNLVR 88
           +GRG+ G VY    A   R+L AV ++    D +E        + EI+++    H  +V+
Sbjct: 10  LGRGAFGEVYLCYDADTGREL-AVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQ 68

Query: 89  LLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
             G   +  +K L    EYM  GS+ D L         + R    R I +G+ YLH    
Sbjct: 69  YYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRR-YTRQILQGVSYLHS--- 124

Query: 147 TQIIHCDIKPQNILMD 162
             I+H DIK  NIL D
Sbjct: 125 NMIVHRDIKGANILRD 140

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|234779 PRK00485, fumC, fumarate hydratase; Reviewed

 Score = 39.7 bits (94), Expect = 4e-04
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 9/51 (17%)

Query: 40  SSGTVYKGAM-------INRQLV-AVNRLEKVLDEREREFQTEIKVIGRTH 82
           SS   +  AM       I  +L+ A+  L   L  +  EF   +K IGRTH
Sbjct: 139 SSNDTFPTAMHIAAVLAIVERLLPALEHLRDTLAAKAEEFADIVK-IGRTH 188

Length = 464

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 39.6 bits (92), Expect = 4e-04
 Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 10/134 (7%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQT---EIKVIGRTHHRNLVRL 89
           EK+G G+  TV+KG + +   LVA+  +   L+  E    T   E+ ++    H N+V L
Sbjct: 12  EKLGEGTYATVFKGRSKLTENLVALKEIR--LEHEEGAPCTAIREVSLLKDLKHANIVTL 69

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
                      LV+EY+ +  L   + +     +          I RG+ Y H     ++
Sbjct: 70  HDIVHTDKSLTLVFEYL-DKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCH---RRKV 125

Query: 150 IHCDIKPQNILMDE 163
           +H D+KPQN+L++E
Sbjct: 126 LHRDLKPQNLLINE 139

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 39.9 bits (93), Expect = 4e-04
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 28/140 (20%)

Query: 36  VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDERE-------REFQTEIKVIGRTHHRNLV 87
           + RG+ G VY G    N +L AV    KV+ + +        + Q E   +  +    +V
Sbjct: 12  ISRGAFGKVYLGRKKNNSKLYAV----KVVKKADMINKNMVHQVQAERDALALSKSPFIV 67

Query: 88  RLLGYSLEVSKKI-LVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYL 141
            L  YSL+ +  + LV EY+  G +  +L     F+ E    +I    +A D      YL
Sbjct: 68  HLY-YSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALD------YL 120

Query: 142 HDECETQIIHCDIKPQNILM 161
           H      IIH D+KP N+L+
Sbjct: 121 H---RHGIIHRDLKPDNMLI 137

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|236586 PRK09605, PRK09605, bifunctional UGMP family protein/serine/threonine protein kinase; Validated

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 37/174 (21%), Positives = 69/174 (39%), Gaps = 31/174 (17%)

Query: 6   KIDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEK--- 62
           +++ N+ T     ++   E  K        +G+G+   + KG  + R  V   R+ K   
Sbjct: 311 RVNPNFRTDEVEVTWIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYR 370

Query: 63  --VLDEREREFQT--EIKVIGRTHHRNLVRLLG------YSLEVSKKILVYEYMSNGSLA 112
              LDER R  +T  E +++      +  R  G      Y ++  +K +V EY+    L 
Sbjct: 371 HPELDERLRTERTRAEARLL------SEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLK 424

Query: 113 DILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC 166
           D+L              + R +   +  LH      I+H D+   N ++ ++R 
Sbjct: 425 DVLEG---------NPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIVRDDRL 466

Length = 535

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 39.2 bits (91), Expect = 5e-04
 Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 13/134 (9%)

Query: 36  VGRGSSGTVYKGA-MINRQLVAVNRLEK--VLDERE-REFQTEIKVIGRTHHRNLVRLLG 91
           +G+GS G V      ++ +  AV  L+K  VL+ +E +    E  V+ +      +  L 
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLH 62

Query: 92  YSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGILYLHDECETQ 148
           YS + ++K+  V ++++ G L    F+ +++ ++ E      A +IA  + YLH      
Sbjct: 63  YSFQTTEKLYFVLDFVNGGEL---FFHLQRERSFPEPRARFYAAEIASALGYLH---SIN 116

Query: 149 IIHCDIKPQNILMD 162
           I++ D+KP+NIL+D
Sbjct: 117 IVYRDLKPENILLD 130

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 39.2 bits (91), Expect = 5e-04
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 20/109 (18%)

Query: 75  IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL-----------FNAEKQPN 123
           +K+IG+  H+N++ LLG   +     ++ EY S G+L + L           F+  K P 
Sbjct: 71  MKMIGK--HKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPE 128

Query: 124 ----WIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
               + +    A  +ARG+ YL  +   + IH D+  +N+L+ E+   K
Sbjct: 129 EQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVTEDNVMK 174

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 39.4 bits (92), Expect = 5e-04
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 10/119 (8%)

Query: 55  VAVNRLEKVLDERERE-FQTEIKVIGRTH---HRNLVRLLGYSLEVSKKILVYEYMSNGS 110
           VAV  L+      ERE   +E+K++  +H   H N+V LLG        +++ EY   G 
Sbjct: 68  VAVKMLKPTAHSSEREALMSELKIM--SHLGNHENIVNLLGACTIGGPILVITEYCCYGD 125

Query: 111 LADILF-NAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           L + L    E      +    +  +A+G+ +L  +     IH D+  +N+L+   +  K
Sbjct: 126 LLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVK 181

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 39.2 bits (91), Expect = 5e-04
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 23/127 (18%)

Query: 58  NRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN 117
           +  EK L +   E +  +K+IG+  H+N++ LLG   +     ++ EY S G+L + L  
Sbjct: 58  DATEKDLSDLVSEMEM-MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-R 113

Query: 118 AEKQPNWIERTGIAR----------------DIARGILYLHDECETQIIHCDIKPQNILM 161
           A + P       IAR                 +ARG+ YL  +   + IH D+  +N+L+
Sbjct: 114 ARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLV 170

Query: 162 DENRCAK 168
            EN   K
Sbjct: 171 TENNVMK 177

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 38.9 bits (91), Expect = 6e-04
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)

Query: 34  EKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVL----DEREREFQTEIKVIGRTHHRNLVR 88
            +VG+G  G V+     +  ++VA+ R++K L    +E  R   TE  ++  T    LV+
Sbjct: 7   TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEV-RHVLTERDILTTTKSEWLVK 65

Query: 89  LLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
           LL Y+ +  + + L  EY+  G    +L N         R  +A      +  LH   E 
Sbjct: 66  LL-YAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFE-AVDALH---EL 120

Query: 148 QIIHCDIKPQNILMD 162
             IH D+KP+N L+D
Sbjct: 121 GYIHRDLKPENFLID 135

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 38.9 bits (91), Expect = 6e-04
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 11/90 (12%)

Query: 82  HHRNLVRLLGYSLEVSKKILV-YEYMSNGSLADILFNAEKQPNWIERTGIARD------- 133
            H+N++ +L   +E  +   V Y YM+ G+L   L           +    +        
Sbjct: 66  SHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQ 125

Query: 134 IARGILYLHDECETQIIHCDIKPQNILMDE 163
           IA G+ YLH   +  +IH DI  +N ++DE
Sbjct: 126 IACGMSYLH---KRGVIHKDIAARNCVIDE 152

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 39.0 bits (91), Expect = 6e-04
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 101 LVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
           LV EY++ G  A ++      P +W  +  IA ++  G+  LH      IIH DIKP+N+
Sbjct: 74  LVMEYLNGGDCASLIKTLGGLPEDWA-KQYIA-EVVLGVEDLHQR---GIIHRDIKPENL 128

Query: 160 LMDEN 164
           L+D+ 
Sbjct: 129 LIDQT 133

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 38.8 bits (90), Expect = 8e-04
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 7/136 (5%)

Query: 36  VGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQT--EIKVIGRTHHRNLVRLLGY 92
           VG G+ G V K      +++VA+ + +   +  E +  T  E+K++      N+V L   
Sbjct: 9   VGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEA 68

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
                K  LV+EY+    L  +    E+ PN +    +   I + I  +H   +  I+H 
Sbjct: 69  FRRRGKLYLVFEYVEKNMLELL----EEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHR 124

Query: 153 DIKPQNILMDENRCAK 168
           DIKP+N+L+  N   K
Sbjct: 125 DIKPENLLISHNDVLK 140

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 38.8 bits (90), Expect = 8e-04
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)

Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRLEKVLDER-EREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L +    +  +E   E  V
Sbjct: 8   EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 62

Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 63  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 117

Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL    E +++H D+  +N+L+
Sbjct: 118 --IAKGMNYLE---ERRLVHRDLAARNVLV 142

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 38.5 bits (89), Expect = 9e-04
 Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 31/163 (19%)

Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRL-EKVLDEREREFQTEIK 76
           E+   T  F E++G    G VYKG +         Q VA+  L +K       EF+ E  
Sbjct: 1   EINLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAM 60

Query: 77  VIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILF------------------NA 118
           +  R  H N+V LLG   +     +++ Y S+  L + L                   + 
Sbjct: 61  MRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKST 120

Query: 119 EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM 161
            +  +++    I   IA G+ +L       ++H D+  +N+L+
Sbjct: 121 LEPADFVH---IVTQIAAGMEFLSSH---HVVHKDLATRNVLV 157

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 12/135 (8%)

Query: 36  VGRGSSGTVY----KGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           +G G  G V     K       L  V +   V   ++    +E +++   +H  +V+L  
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKL-- 58

Query: 92  Y-SLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
           Y + +  K I ++ EY   G L  IL +      +  R  IA  +     YLH+     I
Sbjct: 59  YRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIAC-VVLAFEYLHNR---GI 114

Query: 150 IHCDIKPQNILMDEN 164
           I+ D+KP+N+L+D N
Sbjct: 115 IYRDLKPENLLLDSN 129

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 23/143 (16%)

Query: 35  KVGRGSSGTVYKGAMINR--QLVAVNRLEKVLDEREREFQT--EIKVIGRTH---HRNLV 87
           ++G G+ G V+K   +    + VA+ R+     E      T  E+ V+       H N+V
Sbjct: 8   EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 67

Query: 88  RL-----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIA----RGI 138
           RL     +  +   +K  LV+E++      D+    +K P     T   +D+     RG+
Sbjct: 68  RLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPTETIKDMMFQLLRGL 123

Query: 139 LYLHDECETQIIHCDIKPQNILM 161
            +LH     +++H D+KPQNIL+
Sbjct: 124 DFLHSH---RVVHRDLKPQNILV 143

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 32/160 (20%)

Query: 36  VGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRTHH 83
           +G G  G V     I       NR+ KV       D  E++    I      K+IG+  H
Sbjct: 26  LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--H 83

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIERT 128
           +N++ LLG   +     ++ EY S G+L + L                  E+Q ++ +  
Sbjct: 84  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLV 143

Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             A  +ARG+ YL  +   + IH D+  +N+L+ E+   K
Sbjct: 144 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 180

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 8/131 (6%)

Query: 36  VGRGSSGTVYKGA-MINRQLVAVNRLE--KVLDERERE-FQTEIKVIGRTHHRNLVRLLG 91
           VG G+ G V+     I+    A+  +   +V+  ++ +    E +V+    H  ++RL  
Sbjct: 9   VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFW 68

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              +     ++ EY+  G L   L N+ +  N       A +I   + YLH +   +I++
Sbjct: 69  TEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLF-YASEIVCALEYLHSK---EIVY 124

Query: 152 CDIKPQNILMD 162
            D+KP+NIL+D
Sbjct: 125 RDLKPENILLD 135

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 9/104 (8%)

Query: 71  FQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV--YEYMSNGSLADILFNAEKQPNWIERT 128
            + EI+++    H  +V+  G   + ++K L    EYM  GS+ D L         + R 
Sbjct: 51  LECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRK 110

Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL 172
              R I  G+ YLH      I+H DIK  NIL D    A N +L
Sbjct: 111 -YTRQILEGMSYLHS---NMIVHRDIKGANILRDS---AGNVKL 147

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|176465 cd01362, Fumarase_classII, Class II fumarases

 Score = 38.3 bits (90), Expect = 0.001
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 9/51 (17%)

Query: 40  SSGTVYKGAM-------INRQLV-AVNRLEKVLDEREREFQTEIKVIGRTH 82
           SS   +  AM       +  +L+ A+  L   LD +  EF+  +K IGRTH
Sbjct: 135 SSNDTFPTAMHIAAALALQERLLPALKHLIDALDAKADEFKDIVK-IGRTH 184

This subgroup contains Escherichia coli fumarase C, human mitochondrial fumarase, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle. Length = 455

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 25/146 (17%)

Query: 30  DGFK--EKVGRGSSGTVYKGAMINR--QLVAVNRLEKVLDERERE-FQT----EIKVIGR 80
           D ++   ++  G+ G VY+ A   +  ++VA   L+K+  E+E+E F      EI ++ +
Sbjct: 5   DEYEKLNRIEEGTYGVVYR-ARDKKTGEIVA---LKKLKMEKEKEGFPITSLREINILLK 60

Query: 81  THHRNLVRL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIA 135
             H N+V +    +G +L+  K  +V EY+ +  L  ++    KQP    E   +   + 
Sbjct: 61  LQHPNIVTVKEVVVGSNLD--KIYMVMEYVEH-DLKSLMETM-KQPFLQSEVKCLMLQLL 116

Query: 136 RGILYLHDECETQIIHCDIKPQNILM 161
            G+ +LHD     I+H D+K  N+L+
Sbjct: 117 SGVAHLHDN---WILHRDLKTSNLLL 139

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 31/162 (19%), Positives = 66/162 (40%), Gaps = 11/162 (6%)

Query: 10  NYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERE- 68
           N  T +        E   I       +      ++YKG   N + V +   +K     + 
Sbjct: 2   NIITRSYINDIKCIESDDIDKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKV 60

Query: 69  --REFQTEIKVIGRTHHRNLVRLLGYSLEVS----KKILVYEYMSNGSLADILFNAEKQP 122
                + EIK + R    N++++ G+ +++     +  L+ EY + G L ++L   EK  
Sbjct: 61  LIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK-EKDL 119

Query: 123 NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
           ++  +  +A D  +G+  L+        + ++   + L+ EN
Sbjct: 120 SFKTKLDMAIDCCKGLYNLYKYTNKP--YKNLTSVSFLVTEN 159

Length = 283

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 22/156 (14%)

Query: 36  VGRGSSGTVYKGAMINR----QLVAVNRLEKVLDERE--REFQTEIKVIGRTHHRNLVRL 89
           +G+G  G+V +  + +     Q VAV  L+  +       EF  E   +    H N+++L
Sbjct: 7   LGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKL 66

Query: 90  LGYSLEVSKK------ILVYEYMSNGSLADILFNAE--KQPNWIERTGIAR---DIARGI 138
           +G SL    K      +++  +M +G L   L  +   ++P  +    + R   DIA G+
Sbjct: 67  IGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGM 126

Query: 139 LYLHDECETQIIHCDIKPQNILMDENR--CAKNFRL 172
            YL  +     IH D+  +N +++EN   C  +F L
Sbjct: 127 EYLSSK---NFIHRDLAARNCMLNENMTVCVADFGL 159

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 20/109 (18%)

Query: 75  IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA---------------DILFNAE 119
           +K+IG+  H+N++ LLG   +     ++ EY + G+L                DI    E
Sbjct: 71  MKLIGK--HKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPE 128

Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           +Q ++ +    A  +ARG+ YL      + IH D+  +N+L+ E+   K
Sbjct: 129 EQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVTEDNVMK 174

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 13/134 (9%)

Query: 36  VGRGSSGTVYKGA-MINRQLVAVNRLEK--VLDERE-REFQTEIKVIGRTHHRNLVRLLG 91
           +G+GS G V         +  AV  L+K  +L ++E +   +E  V+ +      +  L 
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 62

Query: 92  YSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGILYLHDECETQ 148
           +S + + K+  V +Y++ G L    ++ +++  ++E      A +IA  + YLH      
Sbjct: 63  FSFQTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARFYAAEIASALGYLH---SLN 116

Query: 149 IIHCDIKPQNILMD 162
           I++ D+KP+NIL+D
Sbjct: 117 IVYRDLKPENILLD 130

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 22/142 (15%)

Query: 35  KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQT--EIKVIGRTH---HRNLVR 88
           ++G G+ GTVYK    +    VA+  +    +E      T  E+ ++ R     H N+VR
Sbjct: 7   EIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVR 66

Query: 89  LLGYSLEV-----SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIAR----GIL 139
           L+           +K  LV+E++      D+    +K P         +D+ R    G+ 
Sbjct: 67  LMDVCATSRTDRETKVTLVFEHVDQ----DLRTYLDKVPPPGLPAETIKDLMRQFLRGLD 122

Query: 140 YLHDECETQIIHCDIKPQNILM 161
           +LH  C   I+H D+KP+NIL+
Sbjct: 123 FLHANC---IVHRDLKPENILV 141

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 9/156 (5%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQL--VAVNRLEKVLDEREREFQ---TEIKVIGRTHHRNL 86
           F   +G GS G V      N     VA+ R EK    ++++     +E K++   +H   
Sbjct: 34  FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFC 93

Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           V L G   + S   LV E++  G     L   ++ PN +     A  I     YL     
Sbjct: 94  VNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVG-CFYAAQIVLIFEYLQ---S 149

Query: 147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARS 182
             I++ D+KP+N+L+D++   K       KV + R+
Sbjct: 150 LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT 185

Length = 340

>gnl|CDD|223192 COG0114, FumC, Fumarase [Energy production and conversion]

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 9/51 (17%)

Query: 40  SSGTVYKGAM-------INRQLV-AVNRLEKVLDEREREFQTEIKVIGRTH 82
           SS   +  AM       +  +L+ A+  L K L  +  EF   +K IGRTH
Sbjct: 138 SSNDTFPTAMHIAAVLAVVNRLIPALKHLIKTLAAKAEEFADVVK-IGRTH 187

Length = 462

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 37.2 bits (86), Expect = 0.003
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 90  LGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLHDECET 147
           L Y+ E    + LV   M+ G L   ++N  ++   +ER    +  I  GIL+LH     
Sbjct: 58  LAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLH---SM 114

Query: 148 QIIHCDIKPQNILMDEN 164
            I++ D+KP+N+L+D+ 
Sbjct: 115 DIVYRDMKPENVLLDDQ 131

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 37.0 bits (86), Expect = 0.003
 Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 15/144 (10%)

Query: 33  KEKVGRGSSGTVYKGAMINRQ----LVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLV 87
              +G G  G VY+G  ++ +     VAV   +       RE F  E  ++ +  H ++V
Sbjct: 11  GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIV 70

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIE-RTGI--ARDIARGILYLHDE 144
           +L+G  +  +   +V E    G L   L   +     ++  + I  +  ++  + YL   
Sbjct: 71  KLIGV-ITENPVWIVMELAPLGELRSYL---QVNKYSLDLASLILYSYQLSTALAYLES- 125

Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
              + +H DI  +N+L+    C K
Sbjct: 126 --KRFVHRDIAARNVLVSSPDCVK 147

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 36.8 bits (85), Expect = 0.003
 Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 13/137 (9%)

Query: 36  VGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQ---TEIKVIGRTHHRNLVRLLG 91
           +G+G+ G VY+    + R++ A+  L K     ++E      E  ++ RT       ++G
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60

Query: 92  --YSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR-DIARGILYLHDECET 147
             +S +    + LV +YMS G L    ++ +K+  + E    A+  IA  +L L    + 
Sbjct: 61  LKFSFQTDSDLYLVTDYMSGGEL---FWHLQKEGRFSEDR--AKFYIAELVLALEHLHKY 115

Query: 148 QIIHCDIKPQNILMDEN 164
            I++ D+KP+NIL+D  
Sbjct: 116 DIVYRDLKPENILLDAT 132

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|176468 cd01596, Aspartase_like, aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes

 Score = 37.0 bits (87), Expect = 0.003
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 49  MINRQLV-AVNRLEKVLDEREREFQTEIKVIGRTH 82
            +  +L+ A+ +L+  LD +  EF   +K IGRTH
Sbjct: 150 ALLERLLPALEQLQDALDAKAEEFADIVK-IGRTH 183

This group contains aspartase (L-aspartate ammonia-lyase), fumarase class II enzymes, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle. Length = 450

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 36.7 bits (85), Expect = 0.004
 Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 27/145 (18%)

Query: 36  VGRGSSGTVYKGAMINRQL---VAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--- 89
           +G GS+G V+  + ++      VAV ++     +  +    EIK+I R  H N+V++   
Sbjct: 13  LGCGSNGLVF--SAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEV 70

Query: 90  -----------LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGI-ARDIARG 137
                      +G   E++   +V EYM    LA++L   E+ P   E   +    + RG
Sbjct: 71  LGPSGSDLTEDVGSLTELNSVYIVQEYMET-DLANVL---EQGPLSEEHARLFMYQLLRG 126

Query: 138 ILYLHDECETQIIHCDIKPQNILMD 162
           + Y+H      ++H D+KP N+ ++
Sbjct: 127 LKYIH---SANVLHRDLKPANVFIN 148

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	183
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.98
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.97
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.97
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.97
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.97
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.97
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.97
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.97
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.97
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.97
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.97
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.97
KOG0605	550	consensus NDR and related serine/threonine kinases	99.96
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.96
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.96
KOG0198	313	consensus MEKK and related serine/threonine protei	99.96
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.96
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.96
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.96
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.95
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.95
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.95
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.95
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.95
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.95
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.95
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.95
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.95
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.95
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.95
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.95
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.95
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.95
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.95
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.95
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.95
KOG0578	550	consensus p21-activated serine/threonine protein k	99.95
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.95
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.94
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.94
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.94
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.94
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.94
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.94
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.94
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.94
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.94
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.94
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.94
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.94
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.94
KOG0610	459	consensus Putative serine/threonine protein kinase	99.94
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.94
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.94
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.94
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.94
PTZ00267	478	NIMA-related protein kinase; Provisional	99.94
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.94
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.94
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.94
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.94
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.94
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.94
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.94
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.94
KOG0589	426	consensus Serine/threonine protein kinase [General	99.94
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.94
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.94
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.94
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.94
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.94
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.94
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.94
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.94
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.94
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.93
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.93
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.93
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.93
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.93
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.93
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.93
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.93
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.93
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.93
KOG0586	596	consensus Serine/threonine protein kinase [General	99.93
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.93
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.93
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.93
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.93
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.93
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.93
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.93
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.93
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.93
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.93
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.93
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.93
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.93
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.93
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.93
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.93
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.93
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.93
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.93
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.93
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.93
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.93
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.93
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.93
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.93
PHA03212	391	serine/threonine kinase US3; Provisional	99.93
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.93
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.93
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.93
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.93
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.93
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.93
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.93
KOG0584	632	consensus Serine/threonine protein kinase [General	99.93
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.93
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.93
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.93
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.93
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.93
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.93
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.93
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.93
PHA03209	357	serine/threonine kinase US3; Provisional	99.93
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.92
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.92
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.92
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.92
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.92
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.92
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.92
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.92
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.92
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.92
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.92
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.92
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.92
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.92
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.92
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.92
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.92
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.92
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.92
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.92
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.92
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.92
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.92
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.92
PHA02988	283	hypothetical protein; Provisional	99.92
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.92
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.92
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.92
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.92
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.92
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.92
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.92
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.92
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.92
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.92
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.92
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.92
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.92
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.92
PHA03211	461	serine/threonine kinase US3; Provisional	99.92
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.92
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.92
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.92
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.92
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.92
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.92
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.92
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.92
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.92
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.92
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.92
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.92
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.92
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.92
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.92
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.92
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.92
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.92
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.92
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.92
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.92
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.92
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.92
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.92
PTZ00283	496	serine/threonine protein kinase; Provisional	99.92
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.92
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.92
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.92
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.92
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.92
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.92
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.92
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.92
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.92
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.92
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.92
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.91
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.91
PHA03207	392	serine/threonine kinase US3; Provisional	99.91
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.91
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.91
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.91
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.91
PRK09188	365	serine/threonine protein kinase; Provisional	99.91
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.91
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.91
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.91
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.91
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.91
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.91
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.91
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.91
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.91
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.91
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.91
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.91
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.91
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.91
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.91
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.91
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.91
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.91
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.91
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.91
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.91
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.91
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.91
PTZ00036	440	glycogen synthase kinase; Provisional	99.91
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.91
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.91
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.91
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.91
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.91
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.91
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.91
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.91
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.91
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.91
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.91
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.91
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.91
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.91
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.91
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.91
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.91
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.91
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.91
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.91
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.91
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.91
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.91
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.91
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.91
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.9
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.9
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.9
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.9
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.9
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.9
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.9
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.9
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.9
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.9
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.9
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.9
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.9
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.9
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.9
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.9
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.9
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.9
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.9
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.9
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.9
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.9
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.9
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.9
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.9
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.9
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.9
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.9
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.9
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.9
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.9
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.9
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.9
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.9
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.9
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.9
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.9
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.9
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.9
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.89
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.89
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.89
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.89
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.89
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.89
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.89
PHA03210	501	serine/threonine kinase US3; Provisional	99.89
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.89
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.89
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.89
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.89
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.89
PLN00009	294	cyclin-dependent kinase A; Provisional	99.89
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.89
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.89
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.89
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.89
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.89
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.89
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.89
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.89
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.89
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.89
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.88
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.88
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.88
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.88
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.88
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.88
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.88
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.88
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.88
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.88
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.88
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.88
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.88
KOG3653	534	consensus Transforming growth factor beta/activin	99.88
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.88
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.88
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.88
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.88
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.88
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.88
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.88
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.88
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.88
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.88
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.88
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.88
PTZ00284	467	protein kinase; Provisional	99.88
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.88
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.88
KOG1152	772	consensus Signal transduction serine/threonine kin	99.87
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.87
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.87
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.87
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.87
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.87
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.87
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.87
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.87
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.87
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.87
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.87
PRK10345	210	hypothetical protein; Provisional	99.87
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.86
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.86
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.86
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.86
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.86
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.85
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.85
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.85
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.85
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.85
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.85
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.85
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.84
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.84
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.84
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.84
PHA02882	294	putative serine/threonine kinase; Provisional	99.84
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.84
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.84
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.84
PRK14879	211	serine/threonine protein kinase; Provisional	99.83
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.83
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.83
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.82
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.82
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.82
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.82
PRK12274	218	serine/threonine protein kinase; Provisional	99.82
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.82
smart00090	237	RIO RIO-like kinase.	99.81
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.81
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.81
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.81
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.81
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.81
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.8
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.8
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.79
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.79
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.78
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.78
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.78
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.76
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.75
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.74
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.72
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.69
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.69
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.67
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.65
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.58
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.57
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.56
KOG3087	229	consensus Serine/threonine protein kinase [General	99.55
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.47
PLN00181	793	protein SPA1-RELATED; Provisional	99.46
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.43
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.43
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.32
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.27
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.25
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.2
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.14
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.11
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.1
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.99
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.99
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.94
KOG1243	690	consensus Protein kinase [General function predict	98.93
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.93
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.91
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.9
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.89
PRK09902	216	hypothetical protein; Provisional	98.75
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.74
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.63
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.6
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.51
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.5
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.5
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.48
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.44
PF01636	239	APH: Phosphotransferase enzyme family This family	98.4
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.35
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.31
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.29
PLN02876	822	acyl-CoA dehydrogenase	98.22
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.17
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.12
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	98.03
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.88
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.88
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.84
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.82
PRK10593	297	hypothetical protein; Provisional	97.74
PRK05231	319	homoserine kinase; Provisional	97.67
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.64
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.62
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.56
KOG2270	520	consensus Serine/threonine protein kinase involved	97.46
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.4
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	97.27
KOG2268	465	consensus Serine/threonine protein kinase [Signal	96.97
PLN02236	344	choline kinase	96.66
KOG0606	1205	consensus Microtubule-associated serine/threonine	96.62
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	96.57
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.48
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.47
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	96.16
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	96.16
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.11
PLN02756	418	S-methyl-5-thioribose kinase	96.06
PRK10271	188	thiK thiamine kinase; Provisional	95.66
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	95.55
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	95.39
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	95.24
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.69
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	94.62
COG2334	331	Putative homoserine kinase type II (protein kinase	94.52
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	94.37
KOG2137	700	consensus Protein kinase [Signal transduction mech	94.22
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	93.83
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	93.79
PRK11768	325	serine/threonine protein kinase; Provisional	92.81
PRK06148	1013	hypothetical protein; Provisional	92.75
PTZ00384	383	choline kinase; Provisional	92.56
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	91.92
COG4248	637	Uncharacterized protein with protein kinase and he	91.23
PRK06149	972	hypothetical protein; Provisional	90.23

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-34  Score=212.84  Aligned_cols=147  Identities=27%  Similarity=0.378  Sum_probs=129.5

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      |.+.+.||.|+|++||+|+.+ .+..||||.+.+.  .....+.+..|+.+|+.++|+|||++.+++.+.+.+|+|||||
T Consensus        12 y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC   91 (429)
T KOG0595|consen   12 YELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYC   91 (429)
T ss_pred             ceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeC
Confidence            445567999999999999966 4788999998876  4455567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC------Ccccccceeccccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN------RCAKNFRLWIGKVDEA  180 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~------~~~~i~dfg~a~~~~~  180 (183)
                      .||+|..++...+ .+++.....++.|++.|+.+||++   +|+||||||+|||++..      -.+||+|||+|++.+.
T Consensus        92 ~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~  167 (429)
T KOG0595|consen   92 NGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQP  167 (429)
T ss_pred             CCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCc
Confidence            9999999997654 577888888999999999999998   99999999999999875      3589999999998753

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-33  Score=216.34  Aligned_cols=164  Identities=46%  Similarity=0.725  Sum_probs=146.6

Q ss_pred             CCceeCHHHHHHHHhchh--cccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceE
Q 048219           16 TPFSFSYAELKKITDGFK--EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS   93 (183)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   93 (183)
                      ....+++.+++..+++|.  ..||+|+||.||+|...++..+|+|++..........+.+|+.++.+++|||++++.|+|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            345589999999999998  589999999999999988889999988764322145599999999999999999999999


Q ss_pred             EeCC-eEEEEEeccCCCCHHHHHhcCCC-CCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccc
Q 048219           94 LEVS-KKILVYEYMSNGSLADILFNAEK-QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFR  171 (183)
Q Consensus        94 ~~~~-~~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~d  171 (183)
                      .+.+ ..++|+||+++|+|.+.+..... .++|..++.|+.+++.||.|||..+..+|+|||+|++|||+|++.++|++|
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD  220 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD  220 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence            9888 59999999999999999976555 789999999999999999999998767899999999999999999999999


Q ss_pred             eecccccc
Q 048219          172 LWIGKVDE  179 (183)
Q Consensus       172 fg~a~~~~  179 (183)
                      ||+|+...
T Consensus       221 FGLa~~~~  228 (361)
T KOG1187|consen  221 FGLAKLGP  228 (361)
T ss_pred             ccCcccCC
Confidence            99998764

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.9e-33  Score=214.64  Aligned_cols=148  Identities=25%  Similarity=0.347  Sum_probs=130.2

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC--CeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV--SKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e  104 (183)
                      ++-.++||+|+||.||+|++. +++.||+|++.-..  .....-+.+||.+|+++.||||+++.+.....  +.+|+|+|
T Consensus       119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFe  198 (560)
T KOG0600|consen  119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFE  198 (560)
T ss_pred             HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEe
Confidence            444568999999999999965 68899999985432  33344578899999999999999999998765  68999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEAR  181 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~~  181 (183)
                      ||++ ||.-++......+++..+..+++|++.||.|||++   +|+|||||.+|||+|.+|.+||+|||||+|++..
T Consensus       199 YMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~  271 (560)
T KOG0600|consen  199 YMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS  271 (560)
T ss_pred             cccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence            9975 99999987777889999999999999999999998   9999999999999999999999999999998765

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.9e-32  Score=205.83  Aligned_cols=148  Identities=25%  Similarity=0.332  Sum_probs=125.8

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH-------HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE-------REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   99 (183)
                      -.|.+.+.||+|+||.|.+|..+ +++.+|+|++.+....       ......+|+++|++++||+||+++++|..+...
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            34566789999999999999855 6899999999753211       123367999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC---Ccccccceeccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN---RCAKNFRLWIGK  176 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~---~~~~i~dfg~a~  176 (183)
                      |+||||+.||+|++.+.... .+.+.....++.|++.|+.|||++   ||+||||||+|||+..+   ..+||.|||+|+
T Consensus       252 YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGlAK  327 (475)
T KOG0615|consen  252 YMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGLAK  327 (475)
T ss_pred             EEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccchhh
Confidence            99999999999999986543 344455567899999999999998   99999999999999766   789999999999


Q ss_pred             ccc
Q 048219          177 VDE  179 (183)
Q Consensus       177 ~~~  179 (183)
                      +..
T Consensus       328 ~~g  330 (475)
T KOG0615|consen  328 VSG  330 (475)
T ss_pred             ccc
Confidence            863

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.98  E-value=1.2e-31  Score=209.57  Aligned_cols=149  Identities=25%  Similarity=0.301  Sum_probs=135.1

Q ss_pred             HHHhchhcccCcCcCceEEEEEE-cCCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAM-INRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      ..+|...+.||+|+|..||.++. ..+..+|+|.+.+..   +.....+.+||++++.++|||||+++++|++.+++||+
T Consensus        17 ~~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYiv   96 (592)
T KOG0575|consen   17 SKRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIV   96 (592)
T ss_pred             cceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEE
Confidence            35677778899999999999998 678999999997643   34456789999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      .|+|+.++|..+++ .++.+++..+..++.||+.|+.|||++   +|+|||||..|++++++.++||+|||+|....
T Consensus        97 LELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le  169 (592)
T KOG0575|consen   97 LELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLE  169 (592)
T ss_pred             EEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeec
Confidence            99999999999887 557788999999999999999999998   99999999999999999999999999998654

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-32  Score=209.58  Aligned_cols=150  Identities=22%  Similarity=0.329  Sum_probs=132.3

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHH-HHHHHHHHHHHhhcC-CCceeeeeceEEeCC-eEEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDER-EREFQTEIKVIGRTH-HRNLVRLLGYSLEVS-KKILVY  103 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~-~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~-~~~lv~  103 (183)
                      .+|...++||.|+||.||+|... .+..||||++++....- .---++|+.-|++++ ||||+++++++.+.+ .+++||
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf   89 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF   89 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence            46778889999999999999855 57889999998753221 122367999999998 999999999999887 899999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEAR  181 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~~  181 (183)
                      |||+ +.|+++++.+++.+++..+..|+.||++||.|+|.+   |+.|||+||+|||+.....+||+|||+|+.....
T Consensus        90 E~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk  163 (538)
T KOG0661|consen   90 EFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRSK  163 (538)
T ss_pred             Hhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccccC
Confidence            9995 699999998888999999999999999999999998   9999999999999999999999999999976544

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.97  E-value=6.1e-32  Score=196.53  Aligned_cols=147  Identities=26%  Similarity=0.289  Sum_probs=128.1

Q ss_pred             hhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           32 FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      ...++|+|++|.|++|+.+ +|+.||+|++....  +...+-.++|++.|++++|+|+|.+.++|......++|+|||+.
T Consensus         6 ~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh   85 (396)
T KOG0593|consen    6 KLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH   85 (396)
T ss_pred             hhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch
Confidence            3457899999999999977 58999999986532  33345578999999999999999999999999999999999976


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARS  182 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~~~  182 (183)
                       ++-+-+...+...+...+..++.|++.|+.|+|++   +++|||+||+||++..++.+|+||||+|+...++.
T Consensus        86 -TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg  155 (396)
T KOG0593|consen   86 -TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG  155 (396)
T ss_pred             -HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence             56566666666777888888999999999999998   99999999999999999999999999999887653

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.97  E-value=2.6e-31  Score=189.92  Aligned_cols=148  Identities=23%  Similarity=0.311  Sum_probs=131.9

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH--HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      |.-.+.+|+|+||.||+|++. +++.||+|+++.....  .....++||..|+.++|+||+.+.++|...+++.+|+||+
T Consensus         4 Y~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm   83 (318)
T KOG0659|consen    4 YEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFM   83 (318)
T ss_pred             hhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEec
Confidence            444568999999999999965 6889999998754322  2356789999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEAR  181 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~~  181 (183)
                      + .+|+..+......+....+..++.+++.|+.|||++   .|+|||+||.|++++.+|.+||+|||+|+++.++
T Consensus        84 ~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p  154 (318)
T KOG0659|consen   84 P-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP  154 (318)
T ss_pred             c-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence            7 499999988777888889999999999999999998   9999999999999999999999999999988754

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=1.4e-31  Score=201.64  Aligned_cols=151  Identities=23%  Similarity=0.320  Sum_probs=136.0

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEE-cCCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEE
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAM-INRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (183)
                      ..+.+|++.+.||.|+||.|-+|.. ..+..||+|.+.+..   ..+...+.+||++|..++||||+.++++|+..+.+.
T Consensus        50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIv  129 (668)
T KOG0611|consen   50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIV  129 (668)
T ss_pred             chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEE
Confidence            3567899999999999999999985 578999999987643   334567899999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |||||..+|.|++++..+ ..+.+.....++.||..|+.|+|.+   +++|||||.+|||+|.++++||+|||++..+.
T Consensus       130 ivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~  204 (668)
T KOG0611|consen  130 IVMEYASGGELYDYISER-GSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA  204 (668)
T ss_pred             EEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc
Confidence            999999999999999765 4567788888999999999999998   99999999999999999999999999998764

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.97  E-value=8.4e-31  Score=200.91  Aligned_cols=145  Identities=35%  Similarity=0.493  Sum_probs=129.1

Q ss_pred             hhcccCcCcCceEEEEEEcCCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCC-eEEEEEeccCC
Q 048219           32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVS-KKILVYEYMSN  108 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~  108 (183)
                      +.+.+|+|+||.||++.+.....+++|.+.....  .....+.+|+.+|.+++||||+++.|++..+. ..++||||+++
T Consensus        45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~  124 (362)
T KOG0192|consen   45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG  124 (362)
T ss_pred             hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence            3456999999999999988877799999876432  22568999999999999999999999998877 79999999999


Q ss_pred             CCHHHHHhc-CCCCCChHHHHHHHHHHHHHHHHhhhCCCCC-ceecCCCCCCEEecCCC-cccccceecccccc
Q 048219          109 GSLADILFN-AEKQPNWIERTGIARDIARGILYLHDECETQ-IIHCDIKPQNILMDENR-CAKNFRLWIGKVDE  179 (183)
Q Consensus       109 ~~l~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~-i~H~dl~~~nil~~~~~-~~~i~dfg~a~~~~  179 (183)
                      |+|..++.. ....+++..++.++.+|+.|+.|||++   + |+|||||++|+|++.+. ++||+|||+++...
T Consensus       125 GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~  195 (362)
T KOG0192|consen  125 GSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKV  195 (362)
T ss_pred             CcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeec
Confidence            999999977 367788999999999999999999998   6 99999999999999997 99999999998764

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.7e-31  Score=204.95  Aligned_cols=150  Identities=27%  Similarity=0.401  Sum_probs=132.3

Q ss_pred             HHHHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        24 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      ++......+.+.||+|.||.||.|.+.....+++|.++.. ......+.+|+.+|++++|++||++++++..+..++|||
T Consensus       202 ei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVt  280 (468)
T KOG0197|consen  202 EIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVT  280 (468)
T ss_pred             eecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEE
Confidence            3344444566789999999999999998888999998764 233457889999999999999999999999888999999


Q ss_pred             eccCCCCHHHHHhc-CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          104 EYMSNGSLADILFN-AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       104 e~~~~~~l~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ||++.|+|.+++.. .+..+.....+.++.|||.|+.||.++   .+|||||.++|||++++..+||+|||+|+.
T Consensus       281 E~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~  352 (468)
T KOG0197|consen  281 EYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARL  352 (468)
T ss_pred             EecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccc
Confidence            99999999999986 445677778888999999999999998   999999999999999999999999999995

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.97  E-value=1.9e-30  Score=192.90  Aligned_cols=143  Identities=27%  Similarity=0.384  Sum_probs=124.7

Q ss_pred             cccCcCcCceEEEEEEcC-CcEEEEEEccc-hhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCe-EEEEEeccCCCC
Q 048219           34 EKVGRGSSGTVYKGAMIN-RQLVAVNRLEK-VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSK-KILVYEYMSNGS  110 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~lv~e~~~~~~  110 (183)
                      ..||+|+.|+||++.++. ++.+|+|.+.. ..+...+++.+|+++++..+||+||+++++|...+. +.|+||||.+|+
T Consensus        85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGS  164 (364)
T KOG0581|consen   85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGS  164 (364)
T ss_pred             hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCC
Confidence            469999999999999774 67889999843 234556789999999999999999999999999885 999999999999


Q ss_pred             HHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       111 l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |..++...+ ..++...-.++.++++||.|||..  .+|+|||+||+|+|++..|.+||+|||.++...
T Consensus       165 Ld~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv  230 (364)
T KOG0581|consen  165 LDDILKRVG-RIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILV  230 (364)
T ss_pred             HHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhh
Confidence            999997653 356777778999999999999962  299999999999999999999999999998653

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.97  E-value=1e-30  Score=194.09  Aligned_cols=146  Identities=25%  Similarity=0.290  Sum_probs=128.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      ...+.+.||+|+||.|++++.. +++.+|+|.+++..-   ...+....|..+|..++||+|+.+...|++..++|+|+|
T Consensus        26 dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld  105 (357)
T KOG0598|consen   26 DFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLD  105 (357)
T ss_pred             heeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEe
Confidence            4556789999999999999866 478899999987532   234668889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++||.|+..+.+.+ .+.+..+..++.+|+.||.|||+.   +|+||||||+|||+|.+|+++|+|||+|+..
T Consensus       106 ~~~GGeLf~hL~~eg-~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~  175 (357)
T KOG0598|consen  106 YLNGGELFYHLQREG-RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKED  175 (357)
T ss_pred             ccCCccHHHHHHhcC-CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence            999999999997654 456666777899999999999998   9999999999999999999999999999954

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-30  Score=200.19  Aligned_cols=149  Identities=25%  Similarity=0.269  Sum_probs=131.0

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHH---HHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDER---EREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~---~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+.|.+.||+|+|++|++|+.. .++.+|+|.+.+..-..   ...+..|-..|..+ .||.|++++..|+++.++|+|+
T Consensus        74 DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvL  153 (604)
T KOG0592|consen   74 DFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVL  153 (604)
T ss_pred             hcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEE
Confidence            3567789999999999999966 57899999998754322   24567788889888 7999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEAR  181 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~~  181 (183)
                      ||+++|+|.+++...+ .+++.....++.+|+.|++|||++   |||||||||+|||+|.++.++|.|||-|++.+..
T Consensus       154 e~A~nGdll~~i~K~G-sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~  227 (604)
T KOG0592|consen  154 EYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILSPS  227 (604)
T ss_pred             EecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence            9999999999997764 577777788999999999999998   9999999999999999999999999999987654

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=4.9e-31  Score=190.21  Aligned_cols=154  Identities=22%  Similarity=0.321  Sum_probs=127.3

Q ss_pred             HHhchhcccCcCcCceEEEEEE-cCCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeec-eEEeCCe-EEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAM-INRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLG-YSLEVSK-KILV  102 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~-~~~~~~~-~~lv  102 (183)
                      ..+.+.++||+|+||.||++.. .++..+|.|.+.=.  .......+..|+.+|++++||||+++++ .+...+. ++|+
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            3466778999999999999984 57888998887521  1223456889999999999999999988 4555555 8999


Q ss_pred             EeccCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCC-CCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDEC-ETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~-~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||+|.+|+|.+.+..   ..+..++..++.+..|++.||..+|..- ...+.||||||.||+++.+|.+|++|||+++++
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            999999999998853   3466889999999999999999999821 123899999999999999999999999999988


Q ss_pred             ccc
Q 048219          179 EAR  181 (183)
Q Consensus       179 ~~~  181 (183)
                      .+.
T Consensus       179 ~s~  181 (375)
T KOG0591|consen  179 SSK  181 (375)
T ss_pred             cch
Confidence            654

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-29  Score=183.70  Aligned_cols=146  Identities=27%  Similarity=0.286  Sum_probs=128.4

Q ss_pred             hhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           32 FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +...||.|+||.|.+++.+ ++.-+|+|.+++...   .......+|..+|+.+.||+++++.+.+.+.++++++|||++
T Consensus        48 ~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~  127 (355)
T KOG0616|consen   48 RLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVP  127 (355)
T ss_pred             heeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccC
Confidence            3468999999999999976 477889999987543   234568899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEAR  181 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~~  181 (183)
                      ||.+++++...++ ++++....++.||+.|++|||+.   .|++|||||+|||+|.+|.+||.|||+|+-...+
T Consensus       128 GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r  197 (355)
T KOG0616|consen  128 GGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR  197 (355)
T ss_pred             CccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence            9999999977554 56677777999999999999998   9999999999999999999999999999965443

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.96  E-value=4.9e-29  Score=192.63  Aligned_cols=144  Identities=19%  Similarity=0.219  Sum_probs=126.8

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .+.+.||+|+||.||+|+.+ +|..+|+|++.+..   ......+..|-.+|.....+.+|+++..|++..++||+|||+
T Consensus       144 e~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEyl  223 (550)
T KOG0605|consen  144 ELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYL  223 (550)
T ss_pred             hhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEec
Confidence            34578999999999999966 58899999998753   233456788889998889999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |||++..++...+ .+++.....++.+++.|+.-+|+.   +++||||||+|+|+|..|++||.|||||...
T Consensus       224 PGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl  291 (550)
T KOG0605|consen  224 PGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL  291 (550)
T ss_pred             CCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchh
Confidence            9999999997654 566777777899999999999998   9999999999999999999999999999654

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.7e-29  Score=196.07  Aligned_cols=145  Identities=30%  Similarity=0.458  Sum_probs=128.8

Q ss_pred             hhcccCcCcCceEEEEEEcC--C--cE-EEEEEccc---hhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           32 FKEKVGRGSSGTVYKGAMIN--R--QL-VAVNRLEK---VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~~--~--~~-~~ik~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      +.++||+|+||.||+|....  +  .. ||+|..+.   ........+..|+++++.++||||++++|+.....+++++|
T Consensus       161 l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivm  240 (474)
T KOG0194|consen  161 LGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVM  240 (474)
T ss_pred             ccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEE
Confidence            44789999999999998543  2  23 78988874   23455678999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |+|+||+|.+++.......+......++.+.+.||.|||++   .++||||.++|+|++.++.+||+|||+++.+.
T Consensus       241 El~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~  313 (474)
T KOG0194|consen  241 ELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAGS  313 (474)
T ss_pred             EecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence            99999999999987666678888888999999999999998   99999999999999999999999999999875

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=7.6e-29  Score=191.35  Aligned_cols=147  Identities=27%  Similarity=0.371  Sum_probs=128.4

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch----hh-HHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV----LD-EREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~----~~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~  100 (183)
                      ..|.+.+.||+|+||.|+.|... ++..+|+|.+.+.    .. .....+.+|+.+++.+. ||||+++++++.....++
T Consensus        17 g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~   96 (370)
T KOG0583|consen   17 GKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIY   96 (370)
T ss_pred             CceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEE
Confidence            35667789999999999999865 5788999977653    11 22345668999999998 999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC-Ccccccceeccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN-RCAKNFRLWIGKVD  178 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~-~~~~i~dfg~a~~~  178 (183)
                      +||||+.||+|++.+.. ...+.+.....++.|++.|+.|+|++   +|+||||||+|++++.+ +++||+|||+|...
T Consensus        97 ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~  171 (370)
T KOG0583|consen   97 IVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSAIS  171 (370)
T ss_pred             EEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence            99999999999999987 45566677788999999999999998   99999999999999999 99999999999976

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=2.4e-28  Score=182.89  Aligned_cols=147  Identities=31%  Similarity=0.431  Sum_probs=126.1

Q ss_pred             hchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC--eEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS--KKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~  106 (183)
                      +...+.||+|+||.||++...+ +...|+|.+..........+.+|+.+|..++|||||+++|......  .++++|||+
T Consensus        19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~   98 (313)
T KOG0198|consen   19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA   98 (313)
T ss_pred             hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence            4455689999999999998664 7888999876542222556889999999999999999999754443  688999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC-CCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE-NRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~-~~~~~i~dfg~a~~~~  179 (183)
                      ++|+|.+++...+..+++..+..+..|++.||.|+|++   +++|+||||+|||++. ++.+||+|||+|+...
T Consensus        99 ~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~  169 (313)
T KOG0198|consen   99 PGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLE  169 (313)
T ss_pred             CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence            99999999987654678899999999999999999998   9999999999999999 6999999999998654

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.96  E-value=6.3e-29  Score=182.88  Aligned_cols=146  Identities=21%  Similarity=0.301  Sum_probs=123.4

Q ss_pred             hhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH--HHHHHHHHHHHHhhcCCCceeeeeceEEe--CCeEEEEEecc
Q 048219           32 FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLLGYSLE--VSKKILVYEYM  106 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~  106 (183)
                      ....|++|+||.||+|++. +...||+|+++-....  ..-..++||.+|.+++|||||.+.++...  .+.+|+|||||
T Consensus        80 ~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~  159 (419)
T KOG0663|consen   80 KLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYV  159 (419)
T ss_pred             HHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHH
Confidence            3457999999999999976 4678999998643211  11235789999999999999999999874  46799999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEAR  181 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~~  181 (183)
                      +. +|.+++..-...+....+..++.|++.|+.|||++   .|+|||||++|+|+...|.+||+|||+|+-+...
T Consensus       160 Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp  230 (419)
T KOG0663|consen  160 EH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYGSP  230 (419)
T ss_pred             Hh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence            75 99999987666777788888999999999999998   9999999999999999999999999999977543

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.96  E-value=3.1e-28  Score=180.41  Aligned_cols=144  Identities=26%  Similarity=0.389  Sum_probs=121.7

Q ss_pred             hhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH--HHHHHHHHHHHHhhcCCCc-eeeeeceEEeCC------eEEE
Q 048219           32 FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRN-LVRLLGYSLEVS------KKIL  101 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~------~~~l  101 (183)
                      ..+++|+|+||.||+|+.+ +++.||+|.+.-....  ......+|+.+++.++|+| |+.+.+++.+.+      ..++
T Consensus        15 ~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~l   94 (323)
T KOG0594|consen   15 KVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYL   94 (323)
T ss_pred             HHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEE
Confidence            3357999999999999965 5789999987543211  2234678999999999999 999999998766      7899


Q ss_pred             EEeccCCCCHHHHHhcCC---CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAE---KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|++. -++..++....   ...+...+..++.|++.|+.|||++   +|+||||||+||++++.|.+||+|||+|+-+
T Consensus        95 vfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~  170 (323)
T KOG0594|consen   95 VFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLARAF  170 (323)
T ss_pred             EEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchHHHh
Confidence            999996 49999987755   3455567888999999999999998   9999999999999999999999999999965


Q ss_pred             c
Q 048219          179 E  179 (183)
Q Consensus       179 ~  179 (183)
                      .
T Consensus       171 ~  171 (323)
T KOG0594|consen  171 S  171 (323)
T ss_pred             c
Confidence            4

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.96  E-value=1.7e-28  Score=191.13  Aligned_cols=145  Identities=28%  Similarity=0.402  Sum_probs=128.6

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      |.+.+.||+|+||.||+|+.+ +.+.||+|.+.+..  ....+.+.+|+++++.++||||+..+++|++..+.++|+||+
T Consensus         4 yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a   83 (808)
T KOG0597|consen    4 YHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYA   83 (808)
T ss_pred             hhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhh
Confidence            566789999999999999865 57889999987643  234567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      .| +|..++... ..+++..+..++.++..||.|||++   +|.|+|+||+||+++..+.+|++|||+|+.-.
T Consensus        84 ~g-~L~~il~~d-~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~  151 (808)
T KOG0597|consen   84 VG-DLFTILEQD-GKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMS  151 (808)
T ss_pred             hh-hHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcc
Confidence            76 999999764 4567777888999999999999998   99999999999999999999999999999654

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=1.4e-27  Score=182.62  Aligned_cols=148  Identities=26%  Similarity=0.328  Sum_probs=122.6

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH--------------HHHHHHHHHHHHhhcCCCceeeeeceE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE--------------REREFQTEIKVIGRTHHRNLVRLLGYS   93 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~~~~   93 (183)
                      .|.+.+.||+|.||.|.+|+.. .++.+|+|++.+....              ....+.+||.+|+++.|+|+|++.++.
T Consensus        98 qy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvL  177 (576)
T KOG0585|consen   98 QYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVL  177 (576)
T ss_pred             heehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEee
Confidence            4667788999999999999965 5889999998753211              124678999999999999999999998


Q ss_pred             EeC--CeEEEEEeccCCCCHHHHHhcCCCC-CChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccc
Q 048219           94 LEV--SKKILVYEYMSNGSLADILFNAEKQ-PNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNF  170 (183)
Q Consensus        94 ~~~--~~~~lv~e~~~~~~l~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~  170 (183)
                      .++  +.+|||+|||..|.+...-  .... +.+.....|...+..||.|||.+   +|+||||||+|+|++.+|.+||+
T Consensus       178 DDP~s~~~YlVley~s~G~v~w~p--~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~VKIs  252 (576)
T KOG0585|consen  178 DDPESDKLYLVLEYCSKGEVKWCP--PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGTVKIS  252 (576)
T ss_pred             cCcccCceEEEEEeccCCccccCC--CCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCcEEee
Confidence            764  5799999999887664322  2233 66777888999999999999998   99999999999999999999999


Q ss_pred             ceecccccccc
Q 048219          171 RLWIGKVDEAR  181 (183)
Q Consensus       171 dfg~a~~~~~~  181 (183)
                      |||.+..+.+.
T Consensus       253 DFGVs~~~~~~  263 (576)
T KOG0585|consen  253 DFGVSNEFPQG  263 (576)
T ss_pred             ccceeeecccC
Confidence            99999977543

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=6.8e-28  Score=190.41  Aligned_cols=145  Identities=26%  Similarity=0.350  Sum_probs=128.0

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      |++.+.||.|+.|.|.+|... +|+..|||++.+..   ......+-.||.+|+.+.|||+++++++|++...+|++.||
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy   93 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY   93 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence            567789999999999999854 68999999987652   22235678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.|++++...+ .+.+.....++.||+.|+.|+|..   +|+||||||+|+++|..+++||+|||+|.+.
T Consensus        94 v~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe  162 (786)
T KOG0588|consen   94 VPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLE  162 (786)
T ss_pred             cCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecc
Confidence            99999999997654 455677778999999999999997   9999999999999999999999999999875

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.95  E-value=7.1e-27  Score=176.91  Aligned_cols=149  Identities=29%  Similarity=0.407  Sum_probs=124.6

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcC-----------------CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceee
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMIN-----------------RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVR   88 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~-----------------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~   88 (183)
                      +..+.+.+.||+|+||.||+|....                 +..+++|.+.... ......+.+|+.++..++|+||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            4456778899999999999997432                 2368899876542 233456889999999999999999


Q ss_pred             eeceEEeCCeEEEEEeccCCCCHHHHHhcCC------------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCce
Q 048219           89 LLGYSLEVSKKILVYEYMSNGSLADILFNAE------------------KQPNWIERTGIARDIARGILYLHDECETQII  150 (183)
Q Consensus        89 ~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~------------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~  150 (183)
                      +++++.+.+..+++|||+++++|.+++....                  ..+.+.....++.|++.||.|||+.   +++
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~iv  160 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFV  160 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence            9999999899999999999999999885421                  1245566778999999999999998   999


Q ss_pred             ecCCCCCCEEecCCCcccccceeccccc
Q 048219          151 HCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       151 H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+||||+||+++.++.+||+|||+|+..
T Consensus       161 H~dlkp~Nill~~~~~~kl~DfG~~~~~  188 (304)
T cd05096         161 HRDLATRNCLVGENLTIKIADFGMSRNL  188 (304)
T ss_pred             ccCcchhheEEcCCccEEECCCccceec
Confidence            9999999999999999999999999743

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.95  E-value=5.3e-27  Score=181.87  Aligned_cols=145  Identities=19%  Similarity=0.196  Sum_probs=125.8

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||+|... +++.+++|.+.+..   ......+..|+.++..++|++++++++.+.+....+++|||
T Consensus         3 y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~   82 (363)
T cd05628           3 FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEF   82 (363)
T ss_pred             ceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcC
Confidence            345678999999999999865 57889999986532   12234678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.++|+|||+|+..
T Consensus        83 ~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~  151 (363)
T cd05628          83 LPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGL  151 (363)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccc
Confidence            9999999988653 3567778888999999999999998   9999999999999999999999999999754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.95  E-value=7.2e-27  Score=178.46  Aligned_cols=140  Identities=21%  Similarity=0.206  Sum_probs=122.5

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      .||+|+||.||++... +++.+++|.+.+..   ......+..|+.+++.++||||+++.+.+...+..+++|||+++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~   81 (323)
T cd05571           2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE   81 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence            5899999999999865 57889999987542   2233567789999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       111 l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |.+.+... ..+++.....++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus        82 L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~  145 (323)
T cd05571          82 LFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCccc
Confidence            99888653 4567778888899999999999998   9999999999999999999999999999753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=5.8e-27  Score=181.58  Aligned_cols=145  Identities=21%  Similarity=0.215  Sum_probs=126.6

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||+|... .+..+++|.+....   ......+.+|+.++..++|+||+++++.+.+.+..+++|||
T Consensus         3 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~   82 (364)
T cd05599           3 FESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEY   82 (364)
T ss_pred             ceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECC
Confidence            455678999999999999976 57889999987532   22335577899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+..
T Consensus        83 ~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  151 (364)
T cd05599          83 LPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGL  151 (364)
T ss_pred             CCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceec
Confidence            9999999988654 3467778888999999999999998   9999999999999999999999999999754

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.95  E-value=5.2e-28  Score=195.43  Aligned_cols=144  Identities=31%  Similarity=0.479  Sum_probs=126.5

Q ss_pred             hchhcccCcCcCceEEEEEEc------CCcEEEEEEccchhhH-HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVLDE-REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      ..+.+.||+|+||.||+|...      ....||+|.++..... ...+|.+|++++..++|||||+++|+|...++.++|
T Consensus       488 i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~Mv  567 (774)
T KOG1026|consen  488 IVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMV  567 (774)
T ss_pred             eeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEE
Confidence            345578999999999999733      3467999999865444 567899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcC---------CCC----CChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccc
Q 048219          103 YEYMSNGSLADILFNA---------EKQ----PNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKN  169 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~---------~~~----~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i  169 (183)
                      +||+..|||-+++...         ...    ++....+.|+.||+.|+.||.++   .+|||||.++|+|++++..|||
T Consensus       568 FEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~VKI  644 (774)
T KOG1026|consen  568 FEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVVKI  644 (774)
T ss_pred             EEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEEEe
Confidence            9999999999999642         122    66778889999999999999998   9999999999999999999999


Q ss_pred             cceeccc
Q 048219          170 FRLWIGK  176 (183)
Q Consensus       170 ~dfg~a~  176 (183)
                      +|||+++
T Consensus       645 sDfGLsR  651 (774)
T KOG1026|consen  645 SDFGLSR  651 (774)
T ss_pred             cccccch
Confidence            9999998

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.95  E-value=9.5e-27  Score=181.52  Aligned_cols=145  Identities=20%  Similarity=0.217  Sum_probs=124.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||+|... ++..+++|.+.+..   ......+..|+.++..++|++|+++++++.+.+..+++|||
T Consensus         3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~   82 (381)
T cd05626           3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY   82 (381)
T ss_pred             ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEec
Confidence            345578999999999999865 47789999986532   22345688899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++.... .+.+.....++.|++.||.|||+.   +|+||||||+||+++.++.++|+|||+++..
T Consensus        83 ~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~  151 (381)
T cd05626          83 IPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGF  151 (381)
T ss_pred             CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence            99999999886543 456677777889999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=9.7e-27  Score=181.22  Aligned_cols=144  Identities=20%  Similarity=0.189  Sum_probs=124.5

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      |.+.+.||+|+||.||++... +++.+++|.+.+..   ......+.+|+.++..+.||||+++++++.+.+..+++|||
T Consensus         3 y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~   82 (377)
T cd05629           3 FHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEF   82 (377)
T ss_pred             ceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeC
Confidence            455678999999999999865 57889999886532   22335678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +++++|.+.+... ..+++..+..++.|++.||.|||+.   +|+||||||+||+++.++.++++|||+|+.
T Consensus        83 ~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~  150 (377)
T cd05629          83 LPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTG  150 (377)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccc
Confidence            9999999988653 3466777777899999999999998   999999999999999999999999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.95  E-value=1.1e-26  Score=181.21  Aligned_cols=144  Identities=19%  Similarity=0.214  Sum_probs=124.3

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +...+.||+|+||.||+|... .+..+++|.+.+..   ......+..|+.+++.++|++|+++++.+.+.+..++||||
T Consensus         3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~   82 (382)
T cd05625           3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY   82 (382)
T ss_pred             cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeC
Confidence            345678999999999999865 57789999986542   12335678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +++++|.+.+... ..+++.....++.|++.||.|+|+.   +|+||||||+||+++.++.++|+|||+|+.
T Consensus        83 ~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~  150 (382)
T cd05625          83 IPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTG  150 (382)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcc
Confidence            9999999988654 3456677777899999999999998   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.95  E-value=1.2e-26  Score=180.58  Aligned_cols=145  Identities=19%  Similarity=0.194  Sum_probs=124.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      |.+.+.||+|+||.||++... .++.+++|.+.+...   .....+.+|+.++..++|++|+++++.+.+.+..+++|||
T Consensus         3 y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~   82 (376)
T cd05598           3 FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY   82 (376)
T ss_pred             ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeC
Confidence            456678999999999999865 478899999865321   2234577899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++... ..+++.....++.|++.||.|||++   +|+||||||+||+++.++.++|+|||+|..+
T Consensus        83 ~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~  151 (376)
T cd05598          83 IPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (376)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccc
Confidence            9999999998654 3456667777889999999999998   9999999999999999999999999998643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.95  E-value=1.6e-26  Score=179.67  Aligned_cols=145  Identities=20%  Similarity=0.203  Sum_probs=124.9

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+.+.+.||+|+||.||++... +++.+++|.+.+..   ......+.+|+.+++.++|||++++++.+.+.+..+++||
T Consensus        44 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~E  123 (370)
T cd05621          44 DYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVME  123 (370)
T ss_pred             HCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEc
Confidence            3555578999999999999976 46789999886532   1223457789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+++++|.+++...  .+++.....++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       124 y~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~  192 (370)
T cd05621         124 YMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKM  192 (370)
T ss_pred             CCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceec
Confidence            99999999988543  456777788899999999999998   9999999999999999999999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.95  E-value=8.9e-27  Score=178.85  Aligned_cols=149  Identities=22%  Similarity=0.336  Sum_probs=121.9

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeC-C
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEV-S   97 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~-~   97 (183)
                      ..++.+.+.||+|+||.||+|...      .+..+++|.+.... ......+.+|+.++..+ +||||+++++++... +
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            445677889999999999999742      24578999886432 23345688999999999 899999999988764 4


Q ss_pred             eEEEEEeccCCCCHHHHHhcCC----------------------------------------------------------
Q 048219           98 KKILVYEYMSNGSLADILFNAE----------------------------------------------------------  119 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~----------------------------------------------------------  119 (183)
                      ..+++|||+++|+|.+++....                                                          
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            5889999999999998886421                                                          


Q ss_pred             ---CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          120 ---KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       120 ---~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                         ..+.+.....++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+..
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~  224 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDI  224 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeeccccccc
Confidence               1244556677889999999999998   9999999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.95  E-value=1.3e-27  Score=187.22  Aligned_cols=151  Identities=29%  Similarity=0.411  Sum_probs=129.2

Q ss_pred             HHHHHHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEcc--chhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE
Q 048219           22 YAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLE--KVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        22 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~--~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   99 (183)
                      ++++......+.+.||+|+||+||+|.+..  .||+|.++  ...++..+.|.+|+.++++-+|.||+-+.|++..+.. 
T Consensus       386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-  462 (678)
T KOG0193|consen  386 EWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-  462 (678)
T ss_pred             ccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-
Confidence            344444444566789999999999999876  46666664  4445667889999999999999999999999987766 


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .||+.||.|.+|+..+......+.-.....|+.|+++|+.|||++   +|+|+|||..||++.++++|||.|||+|.+-
T Consensus       463 AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk  538 (678)
T KOG0193|consen  463 AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVK  538 (678)
T ss_pred             eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeee
Confidence            999999999999999987666677677788999999999999998   9999999999999999999999999999754

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.95  E-value=1.8e-26  Score=176.31  Aligned_cols=140  Identities=22%  Similarity=0.220  Sum_probs=121.9

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      .||+|+||.||++... ++..+++|.+.+..   ......+..|+.+++.++|||++++.+++...+..+++|||+++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   81 (323)
T cd05595           2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE   81 (323)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence            5899999999999865 57889999987542   2233456789999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       111 l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |...+... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+++..
T Consensus        82 L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~  145 (323)
T cd05595          82 LFFHLSRE-RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccc
Confidence            98887553 3567778888999999999999998   9999999999999999999999999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.95  E-value=1.5e-26  Score=177.85  Aligned_cols=149  Identities=26%  Similarity=0.258  Sum_probs=127.3

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcC--CcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMIN--RQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      ...+.+.+.||+|+||.||+|....  +..+++|.+.+..   ......+.+|+.++..++||||+++++++.+.+..++
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            3456777899999999999998543  3578999886532   1233467889999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +|||+++++|.+++... ..+++.....++.|++.||.|||+.   +++||||||+||+++.++.++|+|||+|+...
T Consensus       109 v~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~  182 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD  182 (340)
T ss_pred             EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence            99999999999988654 3466777788999999999999998   99999999999999999999999999998643

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=1.2e-27  Score=168.83  Aligned_cols=146  Identities=26%  Similarity=0.348  Sum_probs=127.1

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH---HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .++.+.||+|.||.||.|+.+ ++-.+++|.+.+..-.   ....+.+|+++...++||||++++++|.+...+|+++||
T Consensus        24 feigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEy  103 (281)
T KOG0580|consen   24 FEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEY  103 (281)
T ss_pred             ccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEe
Confidence            346678999999999999965 5778999998764321   235688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .+.|+++..++... ..+++.....++.|++.|+.|+|..   +++|||+||+|+|++..+..|++|||-+...
T Consensus       104 a~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~  174 (281)
T KOG0580|consen  104 APRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA  174 (281)
T ss_pred             cCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeec
Confidence            99999999997543 4577777788999999999999997   9999999999999999999999999988754

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2.3e-27  Score=184.35  Aligned_cols=141  Identities=31%  Similarity=0.453  Sum_probs=128.5

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHH
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA  112 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~  112 (183)
                      +++|+|+.|.||.|... .++.||+|++....+...+.+.+|+.+|+..+|+|||.+++.|...+.++.||||++||+|.
T Consensus       279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLT  358 (550)
T KOG0578|consen  279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLT  358 (550)
T ss_pred             hhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchh
Confidence            58999999999999854 57889999998766666677899999999999999999999999889999999999999999


Q ss_pred             HHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          113 DILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       113 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +.+..  ..+++..+..++.++++||.|||.+   +|+|||||.+||+++.++.+||.|||+|..+.
T Consensus       359 DvVt~--~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~  420 (550)
T KOG0578|consen  359 DVVTK--TRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQIS  420 (550)
T ss_pred             hhhhc--ccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccc
Confidence            98854  4578899999999999999999998   99999999999999999999999999998664

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.8e-26  Score=174.44  Aligned_cols=139  Identities=20%  Similarity=0.227  Sum_probs=121.3

Q ss_pred             cCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           36 VGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        36 lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      ||+|+||.||++... ++..+++|.+.+..   ......+..|+.++..++||||+++.+.+...+..+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            699999999999976 46789999886532   22335677899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          112 ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       112 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .+.+... ..+++.....++.|++.||.|||++   +++||||||+||+++.++.++|+|||+|+..
T Consensus        81 ~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~  143 (312)
T cd05585          81 FHHLQRE-GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLN  143 (312)
T ss_pred             HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccC
Confidence            9988653 3467777788899999999999998   9999999999999999999999999999853

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.94  E-value=1.7e-26  Score=176.82  Aligned_cols=146  Identities=21%  Similarity=0.221  Sum_probs=126.2

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+.+.+.||+|+||.||+|... +++.+++|.+.+...   .....+.+|+.++..++||||+++++.+...+..+++||
T Consensus        19 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   98 (329)
T PTZ00263         19 DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLE   98 (329)
T ss_pred             heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEc
Confidence            4567789999999999999976 478899998865321   223467889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+++++|.+.+.... .+++.....++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        99 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  168 (329)
T PTZ00263         99 FVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKV  168 (329)
T ss_pred             CCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEc
Confidence            999999999886543 456666777889999999999998   9999999999999999999999999999854

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.1e-26  Score=176.56  Aligned_cols=145  Identities=25%  Similarity=0.270  Sum_probs=126.3

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||+|... .+..+++|.+.+...   .....+..|+.++..++|+||+++++++...+..+++|||
T Consensus         3 y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   82 (333)
T cd05600           3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEY   82 (333)
T ss_pred             cEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeC
Confidence            456678999999999999976 478899999875422   2335678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++... ..+++.....++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        83 ~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~  151 (333)
T cd05600          83 VPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGI  151 (333)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccc
Confidence            9999999998653 3466777778899999999999998   9999999999999999999999999999854

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.94  E-value=2.5e-26  Score=175.83  Aligned_cols=146  Identities=23%  Similarity=0.195  Sum_probs=127.5

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||++... .++.+++|.+.....   .....+.+|+.++..+.|++++++.+.+.+.+..+++|||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (330)
T cd05601           3 FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEY   82 (330)
T ss_pred             ceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECC
Confidence            456678999999999999865 578899999875422   2334577899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++......+++.....++.|++.||.|+|+.   +++|+||||+||+++.++.++|+|||+|+..
T Consensus        83 ~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~  152 (330)
T cd05601          83 QPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARL  152 (330)
T ss_pred             CCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeEC
Confidence            999999999976555677888888899999999999998   9999999999999999999999999999754

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.94  E-value=2.8e-26  Score=175.77  Aligned_cols=146  Identities=21%  Similarity=0.177  Sum_probs=125.8

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||++... .++.+++|.+.+..   ......+.+|..++..+.|++|+++.+++.+.+..+++|||
T Consensus         3 y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey   82 (331)
T cd05624           3 FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDY   82 (331)
T ss_pred             ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeC
Confidence            456678999999999999866 46788999886532   12234477889999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++......+.+.....++.|++.||.|+|++   +|+|+||||+||+++.++.++|+|||+|+..
T Consensus        83 ~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~  152 (331)
T cd05624          83 YVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKM  152 (331)
T ss_pred             CCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeec
Confidence            999999999976445567777778899999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=4.8e-27  Score=186.14  Aligned_cols=144  Identities=22%  Similarity=0.273  Sum_probs=124.1

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      ..+...||+|+||.|+++..+ +++.+|||.+++..   .++...+..|.+++... +||+++.++..|++..++|+|||
T Consensus       370 F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvme  449 (694)
T KOG0694|consen  370 FRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVME  449 (694)
T ss_pred             eEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEE
Confidence            456689999999999999976 46789999998743   33456678888888766 59999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+.||++....  ....+++..+..|+..|+.||.|||++   +|++||||.+|||+|.+|.+||+|||++|.+
T Consensus       450 y~~Ggdm~~~~--~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~  518 (694)
T KOG0694|consen  450 YVAGGDLMHHI--HTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEG  518 (694)
T ss_pred             ecCCCcEEEEE--ecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccccccccc
Confidence            99999944333  335678888888999999999999998   9999999999999999999999999999954

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.94  E-value=3e-26  Score=175.44  Aligned_cols=140  Identities=22%  Similarity=0.224  Sum_probs=122.3

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      .||+|+||.||++... ++..+++|.+.+..   ......+.+|+.+++.+.|||++++.+.+...+..++||||+++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~   81 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE   81 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence            5899999999999865 57889999987542   2234567889999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       111 l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +...+... ..+.+..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        82 L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~  145 (328)
T cd05593          82 LFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (328)
T ss_pred             HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccC
Confidence            98887553 3567778888999999999999998   9999999999999999999999999998853

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.3e-26  Score=174.62  Aligned_cols=145  Identities=23%  Similarity=0.245  Sum_probs=125.5

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||+|... ++..+++|.+.....   .....+.+|+.+++.++||||+++++++.+.+..+++|||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   82 (291)
T cd05612           3 LERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEY   82 (291)
T ss_pred             ceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeC
Confidence            455678999999999999976 578899998864321   2335678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++... ..+++.....++.|++.||.|+|++   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        83 ~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~  151 (291)
T cd05612          83 VPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKL  151 (291)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhc
Confidence            9999999988654 3466777778899999999999998   9999999999999999999999999998854

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.6e-26  Score=176.00  Aligned_cols=146  Identities=23%  Similarity=0.184  Sum_probs=126.1

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||++... .++.+++|.+.+..   ......+.+|..++..++|++++++++++.+.+..+++|||
T Consensus         3 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (331)
T cd05597           3 FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDY   82 (331)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEec
Confidence            456678999999999999865 47889999986522   12234577899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|...
T Consensus        83 ~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  152 (331)
T cd05597          83 YVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRL  152 (331)
T ss_pred             CCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeec
Confidence            999999999866445577778888999999999999998   9999999999999999999999999998643

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.94  E-value=2.3e-26  Score=173.04  Aligned_cols=145  Identities=25%  Similarity=0.338  Sum_probs=123.8

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      |.+.+.||.|+||.||+|... ++..+++|.+..... .....+.+|+.+++.++|+|++++++++.+.+..+++||+++
T Consensus         7 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   86 (288)
T cd07871           7 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD   86 (288)
T ss_pred             ceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC
Confidence            556678999999999999865 577899998764321 123456789999999999999999999998889999999997


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      + ++.+.+......++......++.|++.||.|||++   +|+|+||||+||+++.++.+||+|||+|+..
T Consensus        87 ~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~  153 (288)
T cd07871          87 S-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAK  153 (288)
T ss_pred             c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeec
Confidence            5 89888866555567777888999999999999998   9999999999999999999999999999753

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.94  E-value=5.8e-26  Score=173.59  Aligned_cols=139  Identities=21%  Similarity=0.203  Sum_probs=120.4

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      .||+|+||.||++... .+..+++|.+.+...   .....+..|+.++..+.|+||+++.+.+...+..++||||+++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   81 (325)
T cd05594           2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE   81 (325)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence            5899999999999865 578899999875421   223456789999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhh-CCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          111 LADILFNAEKQPNWIERTGIARDIARGILYLHD-ECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       111 l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      |...+... ..+++.....++.|++.||.|||+ .   +++|+||||+||+++.++.+||+|||+|+.
T Consensus        82 L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~  145 (325)
T cd05594          82 LFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKE  145 (325)
T ss_pred             HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCee
Confidence            98887543 356777888899999999999997 5   999999999999999999999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.94  E-value=1.3e-27  Score=177.50  Aligned_cols=139  Identities=29%  Similarity=0.402  Sum_probs=113.8

Q ss_pred             hhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC--C---eEEEEEec
Q 048219           32 FKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV--S---KKILVYEY  105 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~---~~~lv~e~  105 (183)
                      -.+.+|.|+||.||+|...+ +..+|||++-....    .-..|..+|+.+.||||+++..+|...  .   ...+||||
T Consensus        28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVley  103 (364)
T KOG0658|consen   28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEY  103 (364)
T ss_pred             eeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHh
Confidence            34679999999999998654 68899998754322    234589999999999999998887632  2   34589999


Q ss_pred             cCCCCHHHHHhcC---CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC-Ccccccceeccccc
Q 048219          106 MSNGSLADILFNA---EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN-RCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~-~~~~i~dfg~a~~~  178 (183)
                      +|. +|++.+...   +...+...+..+..|++.||.|||..   +||||||||+|+|+|.+ +.+||+|||.|+..
T Consensus       104 mP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L  176 (364)
T KOG0658|consen  104 MPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVL  176 (364)
T ss_pred             chH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence            985 899888642   34566666777899999999999997   99999999999999977 99999999999975

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=3.5e-26  Score=173.73  Aligned_cols=148  Identities=24%  Similarity=0.329  Sum_probs=130.7

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch-hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV-LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      ....|++.+.||.|..+.||+|+.. .+..|+||++.-. ...+...+..|+..+..+.||||++++..|.....+|+||
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm  103 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM  103 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence            3456888899999999999999954 5788999998632 2334577899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219          104 EYMSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus       104 e~~~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      .+|.+|++.+.+... ...+++..+..|.++++.||.|||.+   |.+|||+|+.|||++.+|.++|+|||.+-
T Consensus       104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa  174 (516)
T KOG0582|consen  104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSA  174 (516)
T ss_pred             hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeee
Confidence            999999999998753 34578888999999999999999998   99999999999999999999999999875

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.94  E-value=2.3e-26  Score=177.79  Aligned_cols=148  Identities=24%  Similarity=0.332  Sum_probs=130.3

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhH---HHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDE---REREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv  102 (183)
                      ..|.+.+.||+|.||.||.|.... +..+|+|.+.+....   ....+.+|+.+|+.++ |||++.+.++|++....++|
T Consensus        35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv  114 (382)
T KOG0032|consen   35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV  114 (382)
T ss_pred             ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence            457777899999999999999775 889999998765432   2357889999999998 99999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC----Ccccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN----RCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~----~~~~i~dfg~a~~~  178 (183)
                      ||++.||.|++.+...  .+++.....++.|++.++.|+|+.   +++|||+||+|+++...    +.++++|||+|+..
T Consensus       115 mEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~  189 (382)
T KOG0032|consen  115 MELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI  189 (382)
T ss_pred             EEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence            9999999999999765  378888889999999999999997   99999999999999644    37999999999977


Q ss_pred             cc
Q 048219          179 EA  180 (183)
Q Consensus       179 ~~  180 (183)
                      ..
T Consensus       190 ~~  191 (382)
T KOG0032|consen  190 KP  191 (382)
T ss_pred             cC
Confidence            54

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=5.7e-26  Score=171.16  Aligned_cols=145  Identities=23%  Similarity=0.224  Sum_probs=127.7

Q ss_pred             hchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhH---HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .++.+.||.|.-|.||++.... +...|+|.+.+..-.   ...++..|-++|..+.||.+++++..|+.....|++|||
T Consensus        79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~mey  158 (459)
T KOG0610|consen   79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEY  158 (459)
T ss_pred             HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEec
Confidence            3455689999999999999765 588999999875433   345678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          106 MSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       106 ~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      |+||+|..+..... +.+++..+..++.+++.||+|||..   |||+|||||+|||+.++|++-+.||-++.-
T Consensus       159 CpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~  228 (459)
T KOG0610|consen  159 CPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLR  228 (459)
T ss_pred             CCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecccccc
Confidence            99999999886543 5677888888999999999999998   999999999999999999999999998863

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.94  E-value=4.7e-26  Score=177.02  Aligned_cols=145  Identities=21%  Similarity=0.197  Sum_probs=124.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+.+.+.||+|+||.||++... ++..+++|.+.+..   ......+.+|+.+++.++|||++++.+++.+.+..+++||
T Consensus        44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~E  123 (370)
T cd05596          44 DFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVME  123 (370)
T ss_pred             HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEc
Confidence            3556678999999999999875 57789999986532   1223456789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+++++|.+++...  .+++.....++.|++.||.|||++   +|+||||||+||+++.++.++|+|||+|+..
T Consensus       124 y~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~  192 (370)
T cd05596         124 YMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM  192 (370)
T ss_pred             CCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence            99999999988543  456677777889999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.94  E-value=5.5e-26  Score=170.71  Aligned_cols=145  Identities=22%  Similarity=0.226  Sum_probs=123.9

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ...+.||+|+||.||++... ++..+++|.+.+...   .....+.+|+.++..+.|++++++.+.+.+.+..+++||++
T Consensus         3 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05631           3 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIM   82 (285)
T ss_pred             eEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEec
Confidence            45578999999999999864 678899998865321   22345778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|...+.... ..+++.....++.|++.|+.|+|+.   +++|+||||+||+++.++.++|+|||+|+..
T Consensus        83 ~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~  152 (285)
T cd05631          83 NGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQI  152 (285)
T ss_pred             CCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEc
Confidence            9999988775432 3467778888899999999999998   9999999999999999999999999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.94  E-value=7.4e-26  Score=168.33  Aligned_cols=149  Identities=26%  Similarity=0.361  Sum_probs=127.6

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc----CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      ...+.+.+.||+|+||.||+|...    .+..+++|.++... ......+.+|+..+..++|||++++.+++...+..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            345667789999999999999753    35678899887542 2334568889999999999999999999998899999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +|||+++++|.+++......+++.....++.|++.|+.|+|++   +++|+||+|+||+++.++.++++|||.+...
T Consensus        84 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~  157 (266)
T cd05064          84 VTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED  157 (266)
T ss_pred             EEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence            9999999999998876555677888889999999999999998   9999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=4e-26  Score=175.89  Aligned_cols=146  Identities=23%  Similarity=0.226  Sum_probs=127.6

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      |.+.+.||+|+||.||+|... .++.+++|.+.....   .....+..|+.++..+.|++++++++++.+.+..+++|||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (350)
T cd05573           3 FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEY   82 (350)
T ss_pred             ceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcC
Confidence            456778999999999999976 578899999875421   2345678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++++|.+++... ..++......++.|++.||.|||+.   +++|+||||+||+++.++.++|+|||+|+...
T Consensus        83 ~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~  152 (350)
T cd05573          83 MPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMN  152 (350)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence            9999999998664 4567777888999999999999997   99999999999999999999999999998653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=7.1e-26  Score=181.27  Aligned_cols=147  Identities=16%  Similarity=0.143  Sum_probs=125.3

Q ss_pred             HhchhcccCcCcCceEEEEEEcC--CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN--RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .|.+.+.||+|++|.||.|....  +..+++|.+..........+..|+.++..++||||+++++++...+..+++|||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            36777899999999999998543  5667777765443444456788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC---CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNA---EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|.+.+...   ...+.+.....++.|++.||.|+|++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~  219 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQY  219 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceec
Confidence            999999877532   23466777778899999999999998   9999999999999999999999999999865

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.94  E-value=7.7e-26  Score=175.17  Aligned_cols=145  Identities=19%  Similarity=0.196  Sum_probs=124.8

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||++... .+..+++|.+....   ......+..|+.++..++|++++++++.+.+.+..+++|||
T Consensus         3 f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~   82 (360)
T cd05627           3 FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEF   82 (360)
T ss_pred             ceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeC
Confidence            345578999999999999865 57889999886432   22345678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++... ..+++.....++.|++.||.|+|+.   +++||||||+||+++.++.++|+|||+|+..
T Consensus        83 ~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~  151 (360)
T cd05627          83 LPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGL  151 (360)
T ss_pred             CCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccc
Confidence            9999999988654 3466777778999999999999998   9999999999999999999999999998743

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.94  E-value=6.3e-26  Score=171.72  Aligned_cols=146  Identities=25%  Similarity=0.310  Sum_probs=124.3

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+..... .....+.+|+.+++.++|+|++++.+++.+....+++|||+
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   85 (303)
T cd07869           6 SYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYV   85 (303)
T ss_pred             cceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECC
Confidence            3566788999999999999976 578899998864322 12335678999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      + +++.+.+......+.+..+..++.|++.||.|+|++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        86 ~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  153 (303)
T cd07869          86 H-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAK  153 (303)
T ss_pred             C-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceec
Confidence            5 588887765555567777888999999999999998   9999999999999999999999999998743

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.94  E-value=2.8e-26  Score=191.05  Aligned_cols=143  Identities=27%  Similarity=0.500  Sum_probs=127.7

Q ss_pred             chhcccCcCcCceEEEEEEcC--Cc----EEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           31 GFKEKVGRGSSGTVYKGAMIN--RQ----LVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~~--~~----~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+...||+|+||.||.|...+  +.    .|++|.+.+.. ......|+.|..+|+.+.||||+++.|++.+....+|++
T Consensus       695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~l  774 (1025)
T KOG1095|consen  695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILL  774 (1025)
T ss_pred             EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEe
Confidence            345689999999999998653  32    38899988764 334567999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcC------CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219          104 EYMSNGSLADILFNA------EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus       104 e~~~~~~l~~~l~~~------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      |||.+|+|..++...      ...+.-.+.+.++.+|+.|+.||+++   ++|||||.++|+|+++...+||+|||+|+
T Consensus       775 eyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGlAr  850 (1025)
T KOG1095|consen  775 EYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGLAR  850 (1025)
T ss_pred             hhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccchhH
Confidence            999999999999876      56677788889999999999999998   99999999999999999999999999999

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.94  E-value=1.3e-26  Score=181.10  Aligned_cols=152  Identities=29%  Similarity=0.408  Sum_probs=131.7

Q ss_pred             HHHHHHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHH-HHHHHHHHHHHhhcCCCceeeeeceEEeCCeEE
Q 048219           22 YAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        22 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (183)
                      ..++.+.+-.+.++||+|.||.|.+|......+||+|.+....... +..+..|+.+|.+++||||+.++++|...+.++
T Consensus       532 l~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic  611 (807)
T KOG1094|consen  532 LVEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC  611 (807)
T ss_pred             hhhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence            3455566667789999999999999998888899999998765444 478999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCC-CCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219          101 LVYEYMSNGSLADILFNAEK-QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      +++||+++|+|-+++....- .........|+.||+.|+.||.+-   .+||||+.++|+|+|.++++||+|||+|+
T Consensus       612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR  685 (807)
T KOG1094|consen  612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSR  685 (807)
T ss_pred             HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccccc
Confidence            99999999999999976521 122233456999999999999986   99999999999999999999999999998

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.94  E-value=1.1e-25  Score=172.65  Aligned_cols=145  Identities=23%  Similarity=0.196  Sum_probs=124.7

Q ss_pred             hchhcccCcCcCceEEEEEEcC-CcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||++.... +..+++|.+.+..   ......+.+|+.++..+.|++++++.+.+.+.+..+++|||
T Consensus         3 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey   82 (332)
T cd05623           3 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDY   82 (332)
T ss_pred             ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEec
Confidence            4566789999999999998764 6778999886432   11233477889999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +++++|.+++......+++.....++.|++.|+.|+|+.   +++||||||+||+++.++.++|+|||+|+.
T Consensus        83 ~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~  151 (332)
T cd05623          83 YVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLK  151 (332)
T ss_pred             cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchhee
Confidence            999999999976445567777788899999999999998   999999999999999999999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.94  E-value=6.4e-26  Score=176.55  Aligned_cols=149  Identities=23%  Similarity=0.328  Sum_probs=123.8

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCe
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSK   98 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   98 (183)
                      ...+.+.+.||+|+||.||+|...      .+..+++|.++... ......+.+|+.++..+ .||||+++++++...+.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            344667789999999999999632      24578999886432 23345688899999999 79999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCC-----------------------------------------------------------
Q 048219           99 KILVYEYMSNGSLADILFNAE-----------------------------------------------------------  119 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~-----------------------------------------------------------  119 (183)
                      .+++|||+++|+|.+++....                                                           
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            999999999999998885421                                                           


Q ss_pred             ---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          120 ---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       120 ---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                                     ..+++..+..++.|++.||.|+|+.   +++|+||||+||+++.++.++|+|||+|+..
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~  264 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDI  264 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceec
Confidence                           1245556677899999999999998   9999999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=8.6e-26  Score=172.54  Aligned_cols=140  Identities=24%  Similarity=0.254  Sum_probs=119.9

Q ss_pred             cccCcCcCceEEEEEEc----CCcEEEEEEccchhh----HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           34 EKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLD----EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.||+|+||.||++...    .++.+++|.+.+...    .....+..|+.+++.++||||+++++.+...+..+++|||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            46899999999999753    467899999875321    2234567899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +++++|.+.+... ..+.+.....++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+++.
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  149 (323)
T cd05584          82 LSGGELFMHLERE-GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKE  149 (323)
T ss_pred             CCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCee
Confidence            9999999988654 3455666677889999999999998   999999999999999999999999999874

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.94  E-value=1e-25  Score=175.13  Aligned_cols=146  Identities=21%  Similarity=0.183  Sum_probs=125.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      ..+.+.+.||+|+||.||++... .++.+++|.+.+...   .....+.+|+.+++.++|||++++++.+.+.+..+++|
T Consensus        43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~  122 (371)
T cd05622          43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM  122 (371)
T ss_pred             hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            45666788999999999999976 467889998764321   22345678999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||+++++|.+++...  .++......++.|++.||.|||++   +|+||||||+||+++.++.++|+|||+|+..
T Consensus       123 Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~  192 (371)
T cd05622         123 EYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM  192 (371)
T ss_pred             cCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEc
Confidence            999999999988653  356677777899999999999998   9999999999999999999999999999754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=1.4e-26  Score=178.07  Aligned_cols=148  Identities=20%  Similarity=0.256  Sum_probs=127.6

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCe-EEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSK-KILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~lv~e~  105 (183)
                      |...+++|+|+||.++..+.+ ..+.+++|.+.-.  .........+|+.++.++.||||+.+.+.|+..+. .+|+|+|
T Consensus         6 Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y   85 (426)
T KOG0589|consen    6 YEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEY   85 (426)
T ss_pred             hhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEee
Confidence            556678999999999988855 4667888887532  22233468899999999999999999999988777 9999999


Q ss_pred             cCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          106 MSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       106 ~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      |+||++.+.+...+ ..+.+..+..++.|++.|+.|||++   +|+|||||+.||++..++.++|.|||+|+..+.
T Consensus        86 ~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~  158 (426)
T KOG0589|consen   86 CEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP  158 (426)
T ss_pred             cCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence            99999999997655 5677888889999999999999988   999999999999999999999999999998754

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.94  E-value=1.1e-26  Score=158.61  Aligned_cols=144  Identities=25%  Similarity=0.340  Sum_probs=124.6

Q ss_pred             hcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           33 KEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        33 ~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .++||+|++|+|++|+.. +...|++|.+.-...  ......++|+.+++.++|.||+++++.......+-+|+|+|.. 
T Consensus         7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq-   85 (292)
T KOG0662|consen    7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-   85 (292)
T ss_pred             HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-
Confidence            357999999999999865 467889998754321  1235678999999999999999999999999999999999964 


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      ++..+....+..++......++.|++.||.++|++   .+.|||+||.|.+++.+|..|++|||+|+-+..
T Consensus        86 dlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgi  153 (292)
T KOG0662|consen   86 DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGI  153 (292)
T ss_pred             HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCC
Confidence            89888887777777777778899999999999998   999999999999999999999999999996543

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=2.3e-26  Score=170.61  Aligned_cols=142  Identities=23%  Similarity=0.351  Sum_probs=121.1

Q ss_pred             hcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEe-----CCeEEEEEe
Q 048219           33 KEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLE-----VSKKILVYE  104 (183)
Q Consensus        33 ~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e  104 (183)
                      .+.||.|++|.|+.|.+. ++..||+|++.+.  .....++..+|+.+|+.++|+||+.+.+.+..     -+.+|+|+|
T Consensus        27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e  106 (359)
T KOG0660|consen   27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE  106 (359)
T ss_pred             cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence            357999999999999865 5788999998753  23446788999999999999999999988864     235899999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++ ..+|.+.+... ..++..-...++.|++.||.|+|+.   +++||||||+|++++.++.+||+|||+|+...
T Consensus       107 lM-etDL~~iik~~-~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~  176 (359)
T KOG0660|consen  107 LM-ETDLHQIIKSQ-QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLD  176 (359)
T ss_pred             HH-hhHHHHHHHcC-ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeecc
Confidence            99 56999988664 3366666666889999999999998   99999999999999999999999999999774

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.94  E-value=1.3e-25  Score=171.04  Aligned_cols=148  Identities=24%  Similarity=0.339  Sum_probs=124.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-Cc----EEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-RQ----LVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-~~----~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      ..+...+.||+|+||.||+|.+.. +.    .+++|.+.... ......+.+|+.+++.++|+|++++++++... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            345666789999999999998542 22    37888876432 33456788899999999999999999988754 5678


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++|++++|++.+.+......+++.....++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||+|+...
T Consensus        86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~  160 (316)
T cd05108          86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  160 (316)
T ss_pred             eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccccc
Confidence            9999999999999876555677778888999999999999998   99999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.94  E-value=1.6e-25  Score=171.45  Aligned_cols=139  Identities=26%  Similarity=0.266  Sum_probs=120.7

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||++... .+..+++|.+.+...   .....+..|..++..+ +||||+++++++.+.+..+++|||++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g   81 (329)
T cd05588           2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG   81 (329)
T ss_pred             eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            5899999999999865 578899999875421   2234577889999888 6999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +|...+... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+.
T Consensus        82 ~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~  145 (329)
T cd05588          82 DLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKE  145 (329)
T ss_pred             CHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccc
Confidence            998877543 4577888888999999999999998   999999999999999999999999999874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.94  E-value=2.2e-25  Score=167.08  Aligned_cols=147  Identities=27%  Similarity=0.393  Sum_probs=125.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc-----CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEe--CCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-----NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE--VSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l  101 (183)
                      .+.+.+.||+|+||.||++...     .+..+++|.+..........+.+|+.++..++|+|++++.+++..  ....++
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   84 (284)
T cd05081           5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL   84 (284)
T ss_pred             cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence            3456678999999999998742     467899999876554555678899999999999999999988754  346889


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++||+++++|.+++......+++.....++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+++..
T Consensus        85 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~  158 (284)
T cd05081          85 VMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVL  158 (284)
T ss_pred             EEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccccc
Confidence            9999999999999866545577788888999999999999998   9999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.94  E-value=1.5e-25  Score=171.31  Aligned_cols=142  Identities=23%  Similarity=0.267  Sum_probs=120.4

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHH---hhcCCCceeeeeceEEeCCeEEEEE
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVI---GRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l---~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+.+.||+|+||.||++... +++.+++|.+.+..   ......+..|+.++   +.++|||++++++++...+..+++|
T Consensus         2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~   81 (324)
T cd05589           2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVM   81 (324)
T ss_pred             eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEE
Confidence            45678999999999999865 57889999987542   12234566666654   5668999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ||+++++|...+..  ..+++.....++.|++.|+.|+|+.   +++|+||||+||+++.++.+||+|||+++.
T Consensus        82 E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~  150 (324)
T cd05589          82 EYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKE  150 (324)
T ss_pred             cCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCcc
Confidence            99999999887743  4577888888999999999999998   999999999999999999999999999874

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=1.6e-25  Score=170.63  Aligned_cols=141  Identities=25%  Similarity=0.254  Sum_probs=121.7

Q ss_pred             cccCcCcCceEEEEEEc----CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           34 EKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +.||+|+||.||++...    .+..+++|.+.+...  .....+..|+.++..++|+||+++++++.+.+..+++|||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            46899999999998742    467899999875432  123456789999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+.+... ..+++..+..++.|++.||.|||+.   +++|+||||+||+++.++.++|+|||+++..
T Consensus        82 ~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~  148 (318)
T cd05582          82 GGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES  148 (318)
T ss_pred             CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCccc
Confidence            99999988543 3467788888999999999999998   9999999999999999999999999999754

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.94  E-value=4.9e-26  Score=179.63  Aligned_cols=148  Identities=28%  Similarity=0.407  Sum_probs=127.6

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-C-----CceeeeeceEEeCCeEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-H-----RNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h-----~~i~~~~~~~~~~~~~~  100 (183)
                      -+|.+.+.||+|+||.|.+|.+. +++.||||++++. .........|+.+|..++ |     -|+|+++++|...++.|
T Consensus       186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc  264 (586)
T KOG0667|consen  186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC  264 (586)
T ss_pred             EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence            36778899999999999999976 5889999999765 345567788999999886 4     28999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC--Ccccccceecccc
Q 048219          101 LVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN--RCAKNFRLWIGKV  177 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~--~~~~i~dfg~a~~  177 (183)
                      ||+|.+. -+|+++++... +.++...+..++.||+.+|.+||..   +|||+||||+|||+...  ..+|++|||.|.+
T Consensus       265 iVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~  340 (586)
T KOG0667|consen  265 IVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCF  340 (586)
T ss_pred             eeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccc
Confidence            9999995 59999998754 4466778888999999999999987   99999999999999765  5799999999998


Q ss_pred             ccc
Q 048219          178 DEA  180 (183)
Q Consensus       178 ~~~  180 (183)
                      ...
T Consensus       341 ~~q  343 (586)
T KOG0667|consen  341 ESQ  343 (586)
T ss_pred             cCC
Confidence            654

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.94  E-value=1.3e-25  Score=173.49  Aligned_cols=140  Identities=27%  Similarity=0.393  Sum_probs=119.6

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      .+.+.||+|+||.||++... +++.+++|.+.... ......+.+|+.+++.++|+||+++++++...+..+++|||+++
T Consensus        77 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  156 (353)
T PLN00034         77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDG  156 (353)
T ss_pred             hhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCC
Confidence            34568999999999999865 57889999885432 23345688999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|....     ...+..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+++..
T Consensus       157 ~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~  218 (353)
T PLN00034        157 GSLEGTH-----IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRIL  218 (353)
T ss_pred             Ccccccc-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceec
Confidence            9885422     234566677899999999999998   9999999999999999999999999999864

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.93  E-value=2.1e-25  Score=170.86  Aligned_cols=139  Identities=27%  Similarity=0.285  Sum_probs=119.6

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||++... ++..+++|.+.+..   ......+..|+.++..+ +||||+++++++...+..+++|||++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~   81 (329)
T cd05618           2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG   81 (329)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence            5899999999999866 46789999987542   22334567888888766 7999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +|...+... ..+++.....++.|++.|+.|+|++   +++|+||||+||+++.++.++|+|||+|+.
T Consensus        82 ~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~  145 (329)
T cd05618          82 DLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  145 (329)
T ss_pred             CHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCcccc
Confidence            998877543 4567778888999999999999998   999999999999999999999999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.93  E-value=5.6e-26  Score=184.06  Aligned_cols=149  Identities=21%  Similarity=0.262  Sum_probs=126.7

Q ss_pred             HHhchhcccCcCcCceEEEEEEcCC-cEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceE-Ee---C---Ce
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYS-LE---V---SK   98 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~-~~---~---~~   98 (183)
                      ....+.+.|.+|+|+.||+|.+..+ ..+|+|++-.........+.+|+++|+.|+ |+|||.+++.. ..   .   -.
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            3455667899999999999998765 899999976655566778999999999997 99999999843 21   1   23


Q ss_pred             EEEEEeccCCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219           99 KILVYEYMSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ..+.||||.++.|-+++..+ ...+++..++.|+.++++|+.+||.. +.+|+|||||.+|+|++.+++.||||||.|.-
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt  195 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATT  195 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence            57899999999999999754 24488999999999999999999985 56899999999999999999999999999874

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.93  E-value=3e-25  Score=164.05  Aligned_cols=145  Identities=24%  Similarity=0.336  Sum_probs=125.6

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      +.+.+.||+|+||.||++....+..+++|.+.... .....+.+|+.+++.++|||++++++++...+..+++|||++++
T Consensus         6 ~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~   84 (256)
T cd05114           6 LTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENG   84 (256)
T ss_pred             cEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCC
Confidence            45567899999999999988777788999876432 22346788999999999999999999999889999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +|.+.+......+++.....++.|++.||.|+|++   +++|+||+|+||+++.++.++++|||.++..
T Consensus        85 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~  150 (256)
T cd05114          85 CLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYV  150 (256)
T ss_pred             cHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcccc
Confidence            99998865444567777888999999999999998   9999999999999999999999999988743

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.93  E-value=2.4e-25  Score=169.92  Aligned_cols=139  Identities=22%  Similarity=0.287  Sum_probs=119.0

Q ss_pred             ccCcCcCceEEEEEEcC-CcEEEEEEccchh---hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMIN-RQLVAVNRLEKVL---DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||+|.... +..+++|.+.+..   ......+..|..++..+ +||+|+++++++...+..+++|||++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   81 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG   81 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence            58999999999998764 6789999987542   12234566788888765 7999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +|...+... ..+++.....++.|++.||.|||++   +++||||||+||+++.++.++|+|||+|+.
T Consensus        82 ~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~  145 (321)
T cd05591          82 DLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKE  145 (321)
T ss_pred             cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeeccccee
Confidence            998888654 3466777788899999999999998   999999999999999999999999999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.93  E-value=2.7e-25  Score=164.32  Aligned_cols=144  Identities=26%  Similarity=0.347  Sum_probs=125.2

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      +.+.+.||+|+||.||++....+..+++|.+.+... ....+..|+.+++.++|+|++++++++...+..+++||+++++
T Consensus         6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd05059           6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANG   84 (256)
T ss_pred             cchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCC
Confidence            456678999999999999877777788988764321 2345778999999999999999999998888999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +|.+++......+++.....++.|++.|+.|+|+.   +++|+|++|+||+++.++.++++|||+++.
T Consensus        85 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~  149 (256)
T cd05059          85 CLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARY  149 (256)
T ss_pred             CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCccccee
Confidence            99998866545567888888999999999999998   999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.93  E-value=2.8e-25  Score=170.20  Aligned_cols=145  Identities=23%  Similarity=0.199  Sum_probs=123.1

Q ss_pred             hchhcccCcCcCceEEEEEEc----CCcEEEEEEccchhh----HHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLD----EREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~  100 (183)
                      +.+.+.||+|+||.||++...    .+..+++|.+.+...    .....+..|+.++..++ |++++++.+++...+..+
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH   81 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence            456678999999999998753    467899998865321    12345778999999995 899999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|||++++++.+.+... ..+++..+..++.|++.||.|||+.   +++||||||+||+++.++.++|+|||+|+..
T Consensus        82 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~  155 (332)
T cd05614          82 LILDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (332)
T ss_pred             EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence            999999999999988653 3466777788899999999999998   9999999999999999999999999999754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.93  E-value=4e-25  Score=165.65  Aligned_cols=140  Identities=24%  Similarity=0.260  Sum_probs=119.8

Q ss_pred             cCcCcCceEEEEEEc-CCcEEEEEEccchhhH---HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           36 VGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        36 lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      ||+|+||.||++... +++.+++|.+......   ....+..|+.+++.+.|++++++.+++...+..+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            699999999999865 5778999988653221   224567899999999999999999999999999999999999999


Q ss_pred             HHHHhcC---CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          112 ADILFNA---EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       112 ~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ...+...   ...+++.....++.|++.|+.|+|++   +++|+||+|+||+++.++.++|+|||+|+..
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~  147 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVEL  147 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceec
Confidence            8777432   23467788888999999999999998   9999999999999999999999999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.93  E-value=4.1e-25  Score=163.49  Aligned_cols=146  Identities=29%  Similarity=0.404  Sum_probs=127.1

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      .+.+.+.||+|+||.||.+....+..+++|.+..... ....+.+|+.++..+.|||++++++++......+++||++++
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN   83 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence            3566778999999999999877766799998865422 235678899999999999999999999888889999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++.+++......+.+..+..++.|++.|+.|+|+.   +++|+||+|+||+++.++.++++|||.++..
T Consensus        84 ~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~  150 (256)
T cd05113          84 GCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYV  150 (256)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceec
Confidence            999998866444577888889999999999999998   9999999999999999999999999998743

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.93  E-value=1.7e-25  Score=174.13  Aligned_cols=151  Identities=23%  Similarity=0.367  Sum_probs=125.1

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeC
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEV   96 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   96 (183)
                      +....+.+.+.||+|+||.||+|...      ....+++|.+.... ......+.+|+.+++.+ +|+||+++++++...
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~  114 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG  114 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence            44556777889999999999998743      23579999886532 33345688899999999 899999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCC---------------------------------------------------------
Q 048219           97 SKKILVYEYMSNGSLADILFNAE---------------------------------------------------------  119 (183)
Q Consensus        97 ~~~~lv~e~~~~~~l~~~l~~~~---------------------------------------------------------  119 (183)
                      +..+++|||+++++|.+++....                                                         
T Consensus       115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (374)
T cd05106         115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS  194 (374)
T ss_pred             CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence            99999999999999998875321                                                         


Q ss_pred             ------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          120 ------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       120 ------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                                  ..+.+.....++.|++.||.|||++   +++||||||+||+++.++.++|+|||+|+..
T Consensus       195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~  262 (374)
T cd05106         195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDI  262 (374)
T ss_pred             ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeec
Confidence                        1234556677899999999999998   9999999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.93  E-value=5.1e-25  Score=162.37  Aligned_cols=141  Identities=25%  Similarity=0.415  Sum_probs=123.3

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      +.||+|+||.||+|... ++..+++|.+.... ......+.+|+.+++.++|+|++++.+++......+++|||++++++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            36899999999999865 57788999875432 33446788999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          112 ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       112 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      .+++......+++.....++.|++.||.|+|++   +++|+||+|+||+++.++.++++|||+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~  143 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSRE  143 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcc
Confidence            998865444567888888999999999999998   999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.93  E-value=7.7e-26  Score=177.37  Aligned_cols=152  Identities=24%  Similarity=0.327  Sum_probs=132.9

Q ss_pred             HHHHHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEE
Q 048219           24 ELKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        24 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (183)
                      ....-.+.+.++||.|.|+.|.++... ++..||+|.+++..  ......+.+|+.+|..++||||++++.+.+.+..+|
T Consensus        52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly  131 (596)
T KOG0586|consen   52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY  131 (596)
T ss_pred             cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence            334455777889999999999999865 57889999988643  233456889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +||||+.+|.+++++....+... .....+..|+..++.|||+.   .|+|||||++|++++.+.++||+|||++.+++
T Consensus       132 lV~eya~~ge~~~yl~~~gr~~e-~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~  206 (596)
T KOG0586|consen  132 LVMEYASGGELFDYLVKHGRMKE-KEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD  206 (596)
T ss_pred             EEEEeccCchhHHHHHhcccchh-hhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec
Confidence            99999999999999987765544 66667889999999999998   99999999999999999999999999999875

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.93  E-value=4.2e-25  Score=168.88  Aligned_cols=140  Identities=24%  Similarity=0.266  Sum_probs=117.5

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHH-HHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIK-VIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||+|... ++..+++|.+.+...   .....+..|.. +++.++||||+++++.+...+..+++|||++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~   81 (325)
T cd05604           2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG   81 (325)
T ss_pred             ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence            5899999999999865 578899999865321   12234444544 567789999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++...+... ..+++.....++.|++.||.|||+.   +++|+||||+||+++.++.++|+|||+|+..
T Consensus        82 ~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~  146 (325)
T cd05604          82 ELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (325)
T ss_pred             CHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence            998887543 3567777888999999999999998   9999999999999999999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.93  E-value=3.3e-25  Score=168.89  Aligned_cols=139  Identities=23%  Similarity=0.274  Sum_probs=116.7

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhh-cCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGR-THHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||+|... .+..+++|.+.....   ........|..++.. ..||||+++++++...+..+++|||++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg   81 (316)
T cd05592           2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG   81 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            5899999999999865 467899998875321   122344556666654 47999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +|...+... ..+++..+..++.|++.||.|||++   +|+|+||||+||+++.++.+||+|||+|+.
T Consensus        82 ~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~  145 (316)
T cd05592          82 DLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKE  145 (316)
T ss_pred             cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeE
Confidence            999888654 3466777778899999999999998   999999999999999999999999999974

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.93  E-value=4.5e-25  Score=168.54  Aligned_cols=140  Identities=26%  Similarity=0.273  Sum_probs=117.5

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHH-HHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIK-VIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||+|... ++..+++|.+.+...   .....+..|.. +++.++||||+++++.+...+..+++|||++++
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g   81 (323)
T cd05575           2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG   81 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence            5899999999999976 578899999865321   12233444544 567889999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +|...+... ..+.+.....++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+++..
T Consensus        82 ~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~  146 (323)
T cd05575          82 ELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (323)
T ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence            999888653 3466777778899999999999998   9999999999999999999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.3e-26  Score=181.66  Aligned_cols=154  Identities=28%  Similarity=0.412  Sum_probs=132.8

Q ss_pred             eCHHHHHHHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEcc---chhhHHHHHHHHHHHHHhhcCCCceeeeeceEEe
Q 048219           20 FSYAELKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLE---KVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE   95 (183)
Q Consensus        20 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~---~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   95 (183)
                      |...++++....+ ..||.|+||.||-|++. +...||||.+.   +...+....++.|+.+|+.+.|||.+.+.|+|..
T Consensus        19 F~k~DPEklf~dL-rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr   97 (948)
T KOG0577|consen   19 FFKDDPEKLFSDL-REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR   97 (948)
T ss_pred             HccCCHHHHHHHH-HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec
Confidence            3444455443333 46899999999999965 57789999875   3345566789999999999999999999999998


Q ss_pred             CCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecc
Q 048219           96 VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIG  175 (183)
Q Consensus        96 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a  175 (183)
                      ..-.|+|||||- |+..+++....+.+.+..+..|+.+.++||.|||++   +.+|||+|+.|||+.+.|.||++|||.|
T Consensus        98 e~TaWLVMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSA  173 (948)
T KOG0577|consen   98 EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSA  173 (948)
T ss_pred             cchHHHHHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccch
Confidence            888999999995 599999988888888999999999999999999998   9999999999999999999999999999


Q ss_pred             ccc
Q 048219          176 KVD  178 (183)
Q Consensus       176 ~~~  178 (183)
                      .+.
T Consensus       174 si~  176 (948)
T KOG0577|consen  174 SIM  176 (948)
T ss_pred             hhc
Confidence            865

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.93  E-value=3.2e-25  Score=169.46  Aligned_cols=144  Identities=24%  Similarity=0.267  Sum_probs=121.5

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCC-ceeeeeceEEeCCeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHR-NLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~e  104 (183)
                      +.+.+.||+|+||.||+|... .++.+++|.+.+..   ......+..|..++..+.|+ +++.+.+++...+..+++||
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (324)
T cd05587           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME   81 (324)
T ss_pred             ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence            456678999999999999866 46789999987542   12334577888899888765 58888888888899999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      |+++++|.+.+... ..+.+.....++.|++.||.|+|++   +++|+||||+||+++.++.++|+|||+|+.
T Consensus        82 ~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~  150 (324)
T cd05587          82 YVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKE  150 (324)
T ss_pred             CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCccee
Confidence            99999999888553 3466777888899999999999998   999999999999999999999999999874

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.93  E-value=4.2e-25  Score=168.86  Aligned_cols=139  Identities=26%  Similarity=0.263  Sum_probs=115.5

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHH-HHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEI-KVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||+|... ++..+++|.+.+...   .....+..|. .+++.+.|+||+++++.+...+..+++|||++++
T Consensus         2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~   81 (325)
T cd05602           2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG   81 (325)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence            5899999999999976 467799998865321   1122344443 4567889999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ++.+.+... ..+.+.....++.|++.||.|+|++   +++||||||+||+++.++.++|+|||+|+.
T Consensus        82 ~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~  145 (325)
T cd05602          82 ELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKE  145 (325)
T ss_pred             cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcc
Confidence            999988654 3455666777899999999999998   999999999999999999999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.93  E-value=6.5e-25  Score=164.65  Aligned_cols=148  Identities=23%  Similarity=0.289  Sum_probs=125.3

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-----CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC--CeE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-----NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV--SKK   99 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~   99 (183)
                      ..+.+.+.||+|+||.||.+...     .+..+++|.+.... ......+.+|+.+++.++|+|++++.+++...  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            34556678999999999998732     46779999886442 33345688999999999999999999988764  568


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|||+++++|.+++.......++..+..++.|++.+|.|+|++   +++|+||+|+||+++.++.++++|||+++..
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI  159 (284)
T ss_pred             EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccccc
Confidence            899999999999998865444567888888999999999999998   9999999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.93  E-value=4.6e-25  Score=169.22  Aligned_cols=148  Identities=20%  Similarity=0.254  Sum_probs=125.6

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      ..|.+.+.||+|+||.||++... .+..+++|.+.... ......+.+|+.++..++|+||+++++++...+..+++|||
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence            45667788999999999999876 46677888765432 23345688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++... ..+++.....++.+++.|+.|+|+.  .+++|+||||+||+++.++.++|+|||++...
T Consensus        85 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~  154 (333)
T cd06650          85 MDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  154 (333)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhh
Confidence            9999999988653 3466777778899999999999974  27999999999999999999999999998754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.93  E-value=4.2e-25  Score=168.57  Aligned_cols=139  Identities=26%  Similarity=0.244  Sum_probs=116.5

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHH-HHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEI-KVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||+|... ++..+++|.+.+...   .....+..|. .+++.++|+||+++.+.+.+.+..+++|||++++
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (321)
T cd05603           2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG   81 (321)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            5899999999999976 477899998865321   1223344454 4678899999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +|...+... ..+.+.....++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||+|+.
T Consensus        82 ~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~  145 (321)
T cd05603          82 ELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKE  145 (321)
T ss_pred             CHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCcc
Confidence            998877543 3456667777899999999999998   999999999999999999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.93  E-value=4.4e-25  Score=169.14  Aligned_cols=147  Identities=22%  Similarity=0.260  Sum_probs=125.6

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .+.+.+.||+|+||.||++... .+..+++|.+.... ......+.+|+.+++.++|+|++++++++...+..+++|||+
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   85 (331)
T cd06649           6 DFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM   85 (331)
T ss_pred             cceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecC
Confidence            4556678999999999999976 46778888876432 233457889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|.+++... ..+++..+..++.|++.|+.|+|+.  .+++|+||||+||+++.++.++|+|||+++..
T Consensus        86 ~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  154 (331)
T cd06649          86 DGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  154 (331)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccc
Confidence            999999988653 3466777888999999999999974  26999999999999999999999999998754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.93  E-value=1.1e-24  Score=163.97  Aligned_cols=147  Identities=23%  Similarity=0.340  Sum_probs=129.3

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ..|.+.+.||+|+||.||++.... +..+++|.+..........+..|+.+++.++|+|++++.+.+...+..+++|||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            346677789999999999998764 7788999887655555677888999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +++++...+......+++..+..++.|++.++.|+|++   +++|+|++|+||+++.++.++|+|||++..
T Consensus        92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~  159 (292)
T cd06644          92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAK  159 (292)
T ss_pred             CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCcccee
Confidence            99999887765555677888888999999999999998   999999999999999999999999998864

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.93  E-value=1.7e-24  Score=162.13  Aligned_cols=146  Identities=21%  Similarity=0.342  Sum_probs=126.9

Q ss_pred             hchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      +.+.+.||+|+||.||++.... +..+++|.+..........+.+|+.+++.+.|+|++++.+.+...+..++++||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            4566789999999999998764 667788887655444556788899999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++...+......+++..+..++.|++.||.|+|+.   +++|+||+|+||+++.++.++++|||++...
T Consensus        87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~  153 (282)
T cd06643          87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN  153 (282)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccc
Confidence            999887765445677888888999999999999998   9999999999999999999999999998643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.93  E-value=7.3e-25  Score=162.24  Aligned_cols=148  Identities=26%  Similarity=0.370  Sum_probs=130.3

Q ss_pred             HHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      ..+.+.+.||.|+||.||+|....+..+++|.+..........+..|+.+++.++|+|++++++++.+....+++||+++
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   85 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELME   85 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecc
Confidence            34667788999999999999988888899999876655455678889999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+++.... ..+.+..+..++.|++.|+.|+|++   +++|+|++|+||+++.++.++++|||.+...
T Consensus        86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~  154 (261)
T cd05148          86 KGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLI  154 (261)
T ss_pred             cCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhc
Confidence            999999986532 3467777888999999999999998   9999999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=4.3e-25  Score=163.62  Aligned_cols=147  Identities=25%  Similarity=0.367  Sum_probs=127.9

Q ss_pred             HHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      ..+.+.+.||+|++|.||+|....+..+++|.+.... .....+.+|+.++++++|+|++++++++...+..+++||+++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05068           6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK   84 (261)
T ss_pred             hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence            3466778999999999999987777789999886532 234567889999999999999999999998899999999999


Q ss_pred             CCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+++.... ..+.+.....++.|++.|+.++|+.   +++|+||+|+||+++.++.++++|||+++..
T Consensus        85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~  153 (261)
T cd05068          85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVI  153 (261)
T ss_pred             CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEc
Confidence            999999986543 4567788888999999999999998   9999999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.93  E-value=3.5e-25  Score=168.06  Aligned_cols=145  Identities=24%  Similarity=0.338  Sum_probs=123.2

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      |.+.+.||+|+||.||+|... .+..+++|.+..... .....+.+|+.+++.++|+|++++++++...+..+++|||++
T Consensus         8 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   87 (309)
T cd07872           8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD   87 (309)
T ss_pred             eEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC
Confidence            556678999999999999865 467789998764321 122356789999999999999999999999999999999997


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      + ++.+.+......+.......++.|++.||.|+|++   +++||||+|+||+++.++.++|+|||+|+..
T Consensus        88 ~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  154 (309)
T cd07872          88 K-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAK  154 (309)
T ss_pred             C-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceec
Confidence            5 88887766555567777788899999999999998   9999999999999999999999999999753

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.93  E-value=1e-24  Score=160.55  Aligned_cols=140  Identities=26%  Similarity=0.419  Sum_probs=123.5

Q ss_pred             ccCcCcCceEEEEEEcCCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHHH
Q 048219           35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLAD  113 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~  113 (183)
                      .||+|+||.||++...++..+++|.+.... ......+.+|+.++..++|+|++++.+.+...+..+++||+++++++.+
T Consensus         2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   81 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS   81 (250)
T ss_pred             ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence            589999999999987778889999876543 2334468889999999999999999999998899999999999999999


Q ss_pred             HHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          114 ILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       114 ~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ++......+.+.....++.+++.++.|+|++   +++|+|++|+||+++.++.++++|||++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~  142 (250)
T cd05085          82 FLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQ  142 (250)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCcccee
Confidence            8865545567788888999999999999998   999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.93  E-value=3.4e-25  Score=169.04  Aligned_cols=139  Identities=24%  Similarity=0.302  Sum_probs=119.0

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||+|... ++..+++|.+.+...   .....+..|..++..+ .|||++++++++...+..+++|||++++
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g   81 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG   81 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence            5899999999999876 477899998875421   2234566788888766 6999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +|...+... ..+++.....++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+++.
T Consensus        82 ~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~  145 (320)
T cd05590          82 DLMFHIQKS-RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE  145 (320)
T ss_pred             hHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCee
Confidence            999887654 3467777888999999999999998   999999999999999999999999999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.93  E-value=8.6e-25  Score=162.68  Aligned_cols=146  Identities=27%  Similarity=0.460  Sum_probs=126.9

Q ss_pred             hchhcccCcCcCceEEEEEEcC-C---cEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-R---QLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~---~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      +.+.+.||+|+||.||+|.... +   ..+++|.+.... ......+..|+.+++.++|||++++.+.+......+++||
T Consensus         6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   85 (269)
T cd05065           6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITE   85 (269)
T ss_pred             eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEe
Confidence            5667889999999999998653 2   368999886542 3345678899999999999999999999988889999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++|.+++......+++.....++.|++.|+.|+|++   +++|+|++|+||+++.++.++++|||+++..
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~  156 (269)
T cd05065          86 FMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL  156 (269)
T ss_pred             cCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccc
Confidence            9999999998876555677888888999999999999998   9999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.93  E-value=1.1e-24  Score=161.91  Aligned_cols=147  Identities=29%  Similarity=0.455  Sum_probs=126.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-C---CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-N---RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~---~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+.+.+.||+|+||.||+|... .   ...+++|.+.... ......+.+|+.++..++|||++++.+++...+..+++|
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (267)
T cd05066           5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVT   84 (267)
T ss_pred             HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence            4566788999999999999854 2   3368888876432 233457888999999999999999999998888999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++++++|.+++......+.+.....++.|++.|+.++|+.   +++|+|++|+||+++.++.++++|||+++..
T Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd05066          85 EYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL  156 (267)
T ss_pred             EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence            99999999999876555567788888999999999999998   9999999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.93  E-value=5.9e-25  Score=167.49  Aligned_cols=139  Identities=24%  Similarity=0.296  Sum_probs=118.1

Q ss_pred             ccCcCcCceEEEEEEcC-CcEEEEEEccchhh---HHHHHHHHHHHHHhh-cCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLD---EREREFQTEIKVIGR-THHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||+|.... +..+++|.+.+...   ........|..++.. +.||||+++++++.+.+..+++|||++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g   81 (316)
T cd05619           2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG   81 (316)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence            58999999999999764 67899999875421   223445667777765 58999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +|...+... ..+++.....++.|++.|+.|||++   +++|+||||+||+++.++.++|+|||+|+.
T Consensus        82 ~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~  145 (316)
T cd05619          82 DLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKE  145 (316)
T ss_pred             cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceE
Confidence            999988653 3466777788999999999999998   999999999999999999999999999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.93  E-value=5.3e-25  Score=167.72  Aligned_cols=139  Identities=22%  Similarity=0.258  Sum_probs=118.1

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhh-cCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGR-THHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||+|... ++..+++|.+.+...   ........|..++.. ..|++++++++++.+.+..+++|||++++
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g   81 (316)
T cd05620           2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG   81 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence            5899999999999976 577899999875421   223445667777765 48999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +|...+... ..+++.....++.|++.||.|||++   +++||||||+||+++.++.++|+|||+++.
T Consensus        82 ~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~  145 (316)
T cd05620          82 DLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKE  145 (316)
T ss_pred             cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCee
Confidence            999888653 3466777788899999999999998   999999999999999999999999999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.2e-24  Score=162.68  Aligned_cols=148  Identities=22%  Similarity=0.320  Sum_probs=130.3

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ..+.+.+.||+|++|.||++... ++..+++|.+..........+..|+.+++.++|+|++++.+.+......+++|||+
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC   84 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence            34667788999999999999865 57788999886554455567888999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++.+++......+++.....++.|++.++.|+|+.   +++|+|++|+||+++.++.++|+|||++...
T Consensus        85 ~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~  153 (280)
T cd06611          85 DGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKN  153 (280)
T ss_pred             CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhh
Confidence            99999998876555677888888999999999999998   9999999999999999999999999988644

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=5.2e-25  Score=165.43  Aligned_cols=146  Identities=23%  Similarity=0.222  Sum_probs=124.3

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +...+.||+|+||.||++... ++..+++|.+.....   .....+.+|+.+++.++|++++++.+.+.+.+..+++|||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            445678999999999999865 577899998865321   1224567899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+.+.... ..+++.....++.|++.|+.|+|+.   +++|+||+|+||++++++.++|+|||+++..
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~  152 (285)
T cd05605          82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEI  152 (285)
T ss_pred             cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceec
Confidence            99999988775432 3467778888899999999999998   9999999999999999999999999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.93  E-value=8.1e-25  Score=167.46  Aligned_cols=139  Identities=27%  Similarity=0.268  Sum_probs=120.3

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||++... ++..+++|.+.+...   .....+..|..++..+ .|++++++.+++...+..+++|||++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (327)
T cd05617           2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG   81 (327)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence            5899999999999865 467899999875422   2234577888888887 5999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +|...+... ..+++..+..++.|++.|+.|||++   +++|+||||+||+++.++.++|+|||+|+.
T Consensus        82 ~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~  145 (327)
T cd05617          82 DLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKE  145 (327)
T ss_pred             cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEecccccee
Confidence            998877543 3577888888999999999999998   999999999999999999999999999874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.93  E-value=1.2e-24  Score=162.70  Aligned_cols=140  Identities=19%  Similarity=0.301  Sum_probs=117.2

Q ss_pred             ccCcCcCceEEEEEEcC-------------------------CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeee
Q 048219           35 KVGRGSSGTVYKGAMIN-------------------------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL   89 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~-------------------------~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   89 (183)
                      .||+|+||.||+|....                         ...+++|.+..........+.+|+.+++.++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            58999999999986321                         13477888765544445567889999999999999999


Q ss_pred             eceEEeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC----
Q 048219           90 LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR----  165 (183)
Q Consensus        90 ~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~----  165 (183)
                      ++++...+..++||||++++++..++......+++..+..++.|++.|+.|+|+.   +++|+||||+||+++..+    
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~~~  158 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLAEG  158 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCcccC
Confidence            9999999999999999999999988865555667888888999999999999998   999999999999997643    


Q ss_pred             ---cccccceecccc
Q 048219          166 ---CAKNFRLWIGKV  177 (183)
Q Consensus       166 ---~~~i~dfg~a~~  177 (183)
                         .++++|||++..
T Consensus       159 ~~~~~kl~d~g~~~~  173 (274)
T cd05076         159 TSPFIKLSDPGVSFT  173 (274)
T ss_pred             ccceeeecCCccccc
Confidence               379999998864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=4.4e-25  Score=172.63  Aligned_cols=139  Identities=19%  Similarity=0.200  Sum_probs=120.6

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +|.+.+.||+|+||.||+|.+. .++.+++|....      ..+.+|+.+++.++||||+++++++......++++|++.
T Consensus        93 ~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~  166 (391)
T PHA03212         93 GFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK  166 (391)
T ss_pred             CcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC
Confidence            4677789999999999999975 577888886432      346789999999999999999999999999999999985


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                       +++..++... ..+++.....++.|++.||.|+|++   +|+||||||+||+++.++.++|+|||+|+..
T Consensus       167 -~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~  232 (391)
T PHA03212        167 -TDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFP  232 (391)
T ss_pred             -CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence             6888877553 3467778888999999999999998   9999999999999999999999999999753

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.93  E-value=5.2e-25  Score=168.83  Aligned_cols=144  Identities=22%  Similarity=0.343  Sum_probs=120.6

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC-----eEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS-----KKIL  101 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l  101 (183)
                      |.+.+.||+|+||.||+|... ++..+++|.+....  ......+.+|+.+++.++||||+++.+++...+     ..++
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            456788999999999999865 57889999886432  223346788999999999999999999886432     4799


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +|||+. +++.+.+... ..+++.....++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        82 v~e~~~-~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          82 VFELME-SDLHQVIKAN-DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             EEecCC-CCHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence            999995 6888887543 3467778888999999999999998   9999999999999999999999999999743

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.93  E-value=7e-25  Score=171.84  Aligned_cols=151  Identities=21%  Similarity=0.330  Sum_probs=124.3

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEcC------CcEEEEEEccchhh-HHHHHHHHHHHHHhhcC-CCceeeeeceEEeC
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLD-EREREFQTEIKVIGRTH-HRNLVRLLGYSLEV   96 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~   96 (183)
                      +....+.+.+.||+|+||.||+|....      ...+++|.+..... .....+.+|+.++..+. ||||+++++++...
T Consensus        34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~  113 (400)
T cd05105          34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS  113 (400)
T ss_pred             ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence            334556677899999999999997532      24689998864322 23456889999999996 99999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCC---------------------------------------------------------
Q 048219           97 SKKILVYEYMSNGSLADILFNAE---------------------------------------------------------  119 (183)
Q Consensus        97 ~~~~lv~e~~~~~~l~~~l~~~~---------------------------------------------------------  119 (183)
                      +..+++|||+++|+|.+++....                                                         
T Consensus       114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (400)
T cd05105         114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE  193 (400)
T ss_pred             CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence            99999999999999998875421                                                         


Q ss_pred             --------------------------------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe
Q 048219          120 --------------------------------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM  161 (183)
Q Consensus       120 --------------------------------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~  161 (183)
                                                            ..+.+..+..++.|++.|+.|+|++   +++|+||||+||++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill  270 (400)
T cd05105         194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLL  270 (400)
T ss_pred             hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEE
Confidence                                                  1244556677899999999999998   99999999999999


Q ss_pred             cCCCcccccceeccccc
Q 048219          162 DENRCAKNFRLWIGKVD  178 (183)
Q Consensus       162 ~~~~~~~i~dfg~a~~~  178 (183)
                      +.++.++++|||+|+..
T Consensus       271 ~~~~~~kL~DfGla~~~  287 (400)
T cd05105         271 AQGKIVKICDFGLARDI  287 (400)
T ss_pred             eCCCEEEEEeCCcceec
Confidence            99999999999999754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.93  E-value=6.9e-25  Score=162.02  Aligned_cols=140  Identities=23%  Similarity=0.369  Sum_probs=118.4

Q ss_pred             cccCcCcCceEEEEEEcCCc-----------EEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           34 EKVGRGSSGTVYKGAMINRQ-----------LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~-----------~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      +.||+|+||.||+|......           .+++|.+...... ...+.+|+.+++.++|+|++++.+++.. ...+++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            35899999999999865432           4566665543222 5678889999999999999999999887 778999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC-------cccccceecc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR-------CAKNFRLWIG  175 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~-------~~~i~dfg~a  175 (183)
                      |||+++++|.+++......++...+..++.|++.||.|+|++   +++|+||||+||+++..+       .++++|||+|
T Consensus        79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            999999999999876554677888888999999999999998   999999999999999887       7999999999


Q ss_pred             ccc
Q 048219          176 KVD  178 (183)
Q Consensus       176 ~~~  178 (183)
                      ...
T Consensus       156 ~~~  158 (259)
T cd05037         156 ITV  158 (259)
T ss_pred             ccc
Confidence            863

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.93  E-value=3.8e-25  Score=164.05  Aligned_cols=144  Identities=35%  Similarity=0.531  Sum_probs=123.5

Q ss_pred             hhcccCcCcCceEEEEEEc-----CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           32 FKEKVGRGSSGTVYKGAMI-----NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~-----~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.||.|+||.||+|...     .+..|++|.+.... ......+.+|+..+.+++||||+++.+++...+..++++|+
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4568999999999999876     25678999986532 33467889999999999999999999999988889999999


Q ss_pred             cCCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++... ...+++..+..++.|++.||.|||++   +++|++|+++||+++.++.+||+|||+++..
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~  153 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPI  153 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred             cccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc
Confidence            9999999999876 45678888899999999999999998   9999999999999999999999999999865

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.93  E-value=1.1e-24  Score=163.71  Aligned_cols=149  Identities=27%  Similarity=0.450  Sum_probs=127.3

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   99 (183)
                      ++..+.+.+.+|+|+||.||++...      .+..+++|.+..........+.+|+.++..++|++++++.+++...+..
T Consensus         3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (288)
T cd05093           3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   82 (288)
T ss_pred             chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence            3455667788999999999998742      2355788888765444556788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCC------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcc
Q 048219          100 ILVYEYMSNGSLADILFNAE------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCA  167 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~  167 (183)
                      ++++||+++++|.+++....            ..+++.....++.|++.+|.|+|++   +++|+||||+||+++.++.+
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~  159 (288)
T cd05093          83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV  159 (288)
T ss_pred             EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcE
Confidence            99999999999999886422            2367778888999999999999998   99999999999999999999


Q ss_pred             cccceecccc
Q 048219          168 KNFRLWIGKV  177 (183)
Q Consensus       168 ~i~dfg~a~~  177 (183)
                      +++|||+++.
T Consensus       160 kl~dfg~~~~  169 (288)
T cd05093         160 KIGDFGMSRD  169 (288)
T ss_pred             EeccCCcccc
Confidence            9999999974

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.93  E-value=1.4e-24  Score=161.22  Aligned_cols=148  Identities=28%  Similarity=0.419  Sum_probs=127.1

Q ss_pred             HhchhcccCcCcCceEEEEEEcC----CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+.+.+.||+|+||.||+|....    ...+++|.+.... ......+..|+.++..++|+|++++.+.+...+..+++|
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~   84 (266)
T cd05033           5 YVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIIT   84 (266)
T ss_pred             HceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEE
Confidence            35567889999999999998642    3568888876433 233456788999999999999999999999888999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |++++++|.+++......+++.....++.|++.|+.|||++   +++|+|++|+||+++.++.++++|||+++...
T Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033          85 EYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             EcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence            99999999999876555677888888999999999999998   99999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.93  E-value=1.7e-24  Score=162.00  Aligned_cols=140  Identities=22%  Similarity=0.272  Sum_probs=118.9

Q ss_pred             cCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           36 VGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        36 lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      ||+|+||.||++... .++.+++|.+.....   .....+..|+++++.++|||++++.+.+......+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            699999999999865 578899998864321   1223456699999999999999999999999999999999999999


Q ss_pred             HHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          112 ADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       112 ~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ...+.... ....+.....++.|++.|+.|+|+.   +++|+||+|+||+++.++.++|+|||++...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~  145 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVEL  145 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeec
Confidence            88775432 3466777778899999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.93  E-value=8.8e-26  Score=177.45  Aligned_cols=149  Identities=25%  Similarity=0.341  Sum_probs=124.9

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEcc--c--hhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCe--EEEEE
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLE--K--VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSK--KILVY  103 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~--~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~  103 (183)
                      ++.+.||+|+|-+||+|.+. .|..||...++  .  ..+....++.+|+.+|+.|+|+||++++.+|.+..+  +.+++
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT  122 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT  122 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence            34568999999999999975 46667644433  1  224456789999999999999999999999998766  78999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC-Ccccccceecccccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN-RCAKNFRLWIGKVDEAR  181 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~-~~~~i~dfg~a~~~~~~  181 (183)
                      |.+..|+|..++.+.+ ..+...+..|++||+.||.|||++. .+|+|||||-+||+++.+ |.|||+|+|+|.+.+.+
T Consensus       123 EL~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s  199 (632)
T KOG0584|consen  123 ELFTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS  199 (632)
T ss_pred             ecccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence            9999999999998764 3566788889999999999999974 599999999999999866 99999999999876543

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.93  E-value=7.8e-25  Score=165.12  Aligned_cols=149  Identities=28%  Similarity=0.368  Sum_probs=124.3

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcC---------------CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeee
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMIN---------------RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLL   90 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~---------------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~   90 (183)
                      +..+.+.+.||+|+||.||.+....               ...+++|.+.... ......+.+|+.++..++|+|+++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            4456777899999999999987532               2357888876542 23345688999999999999999999


Q ss_pred             ceEEeCCeEEEEEeccCCCCHHHHHhcCC-----------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCE
Q 048219           91 GYSLEVSKKILVYEYMSNGSLADILFNAE-----------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI  159 (183)
Q Consensus        91 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~-----------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~ni  159 (183)
                      +++...+..+++|||+++++|.+++....           ....+.....++.|++.|+.|||++   +++|+||+|+||
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni  160 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC  160 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence            99999999999999999999999885421           1245667778899999999999998   999999999999


Q ss_pred             EecCCCcccccceeccccc
Q 048219          160 LMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       160 l~~~~~~~~i~dfg~a~~~  178 (183)
                      +++.++.++++|||+++..
T Consensus       161 ll~~~~~~kl~dfg~~~~~  179 (295)
T cd05097         161 LVGNHYTIKIADFGMSRNL  179 (295)
T ss_pred             EEcCCCcEEeccccccccc
Confidence            9999999999999999753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.93  E-value=1.2e-24  Score=161.23  Aligned_cols=147  Identities=26%  Similarity=0.351  Sum_probs=127.0

Q ss_pred             HHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      ..+.+.+.||+|+||.||+|....+..+++|.+.... .....+.+|+.+++.++|+|++++++.+...+..++++|+++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA   84 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence            4456778999999999999997777789999876532 234578889999999999999999999988889999999999


Q ss_pred             CCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++.+++... ........+..++.|++.|+.|+|+.   +++|+||+|+||+++.++.++++|||+|+..
T Consensus        85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~  153 (261)
T cd05072          85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVI  153 (261)
T ss_pred             CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceec
Confidence            99999988653 23456677778899999999999998   9999999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.93  E-value=7.9e-25  Score=167.26  Aligned_cols=143  Identities=23%  Similarity=0.263  Sum_probs=120.9

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEec
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      ++.+.||+|+||.||+|... ++..+++|.+.+...   .....+..|..++..+. |++++++.+++.+.+..+++|||
T Consensus         3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey   82 (323)
T cd05615           3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEY   82 (323)
T ss_pred             eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcC
Confidence            45678999999999999865 578899999875421   22345677888888776 56788899999889999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +++++|...+... ..+++.....++.|++.|+.|||++   +++|+||||+||+++.++.++|+|||+|+.
T Consensus        83 ~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~  150 (323)
T cd05615          83 VNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE  150 (323)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccc
Confidence            9999999888553 3467788888999999999999998   999999999999999999999999999875

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.93  E-value=1.3e-24  Score=165.79  Aligned_cols=139  Identities=26%  Similarity=0.307  Sum_probs=119.5

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||++... ++..+++|.+.+..   ......+..|..++..+ .|||++++++++...+..+++|||++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (318)
T cd05570           2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG   81 (318)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            5899999999999876 46789999987542   12234566788888877 6999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +|...+... ..+++.....++.|++.||.|||+.   +++|+||||+||+++.++.++|+|||+++.
T Consensus        82 ~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~  145 (318)
T cd05570          82 DLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKE  145 (318)
T ss_pred             CHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCee
Confidence            998887553 3467788888999999999999998   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.93  E-value=1.4e-24  Score=165.89  Aligned_cols=144  Identities=23%  Similarity=0.254  Sum_probs=120.5

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      +.+.+.||+|+||.||+|... ++..+++|.+.+...   ........|..++..+ .|++++++.+++...+..+++||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05616           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME   81 (323)
T ss_pred             ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence            345678999999999999876 467899998875421   1223456677777776 47889999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      |+++++|...+... ..+.+..+..++.|++.||.|||++   +++||||||+||+++.++.++|+|||+|+.
T Consensus        82 ~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~  150 (323)
T cd05616          82 YVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE  150 (323)
T ss_pred             CCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCcee
Confidence            99999999888553 3466778888999999999999998   999999999999999999999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.93  E-value=8.1e-25  Score=164.24  Aligned_cols=145  Identities=22%  Similarity=0.291  Sum_probs=122.6

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||+|+||.||++... ++..+++|.+....  ......+.+|+.+++.++|+|++++.+++...+..+++|||+
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   82 (287)
T cd07848           3 FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYV   82 (287)
T ss_pred             ceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecC
Confidence            456678999999999999976 46788999876432  222356778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++.+..+. .....+++..+..++.|++.||.|||+.   +++|+||||+||+++.++.++|+|||+|+..
T Consensus        83 ~~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~  150 (287)
T cd07848          83 EKNMLELLE-EMPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNL  150 (287)
T ss_pred             CCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccc
Confidence            886665443 3344567778888999999999999998   9999999999999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.93  E-value=2.2e-24  Score=160.25  Aligned_cols=146  Identities=27%  Similarity=0.367  Sum_probs=126.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+..........+.+|+.++..++|+|++++++.+...+..+++|||++
T Consensus        10 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~   89 (267)
T cd06646          10 DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCG   89 (267)
T ss_pred             hcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCC
Confidence            4667788999999999999864 577888988764433344567789999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+++... ..+++.....++.|++.|+.|+|+.   +++|+|++|+||+++.++.++++|||+++..
T Consensus        90 ~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~  156 (267)
T cd06646          90 GGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKI  156 (267)
T ss_pred             CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceee
Confidence            99999988543 3466777888999999999999998   9999999999999999999999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.93  E-value=1e-24  Score=163.45  Aligned_cols=147  Identities=29%  Similarity=0.448  Sum_probs=123.2

Q ss_pred             HhchhcccCcCcCceEEEEEEc-----CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-----NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      .+.+.+.||+|+||.||+|...     .+..+++|.+.... ......+.+|+.+++.++|+|++++.+++......+++
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   85 (283)
T cd05090           6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCML   85 (283)
T ss_pred             hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEE
Confidence            3456678999999999999742     34678898886432 23345688899999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCC----------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc
Q 048219          103 YEYMSNGSLADILFNAE----------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC  166 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~----------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~  166 (183)
                      |||+++++|.+++....                ..+.+.....++.|++.|+.|+|++   +++|+|++|+||+++.++.
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~~  162 (283)
T cd05090          86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQLH  162 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCCc
Confidence            99999999999885321                2345666777899999999999998   9999999999999999999


Q ss_pred             ccccceeccccc
Q 048219          167 AKNFRLWIGKVD  178 (183)
Q Consensus       167 ~~i~dfg~a~~~  178 (183)
                      ++++|||+++..
T Consensus       163 ~kl~dfg~~~~~  174 (283)
T cd05090         163 VKISDLGLSREI  174 (283)
T ss_pred             EEeccccccccc
Confidence            999999999753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=9e-25  Score=169.08  Aligned_cols=143  Identities=19%  Similarity=0.211  Sum_probs=122.8

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      ....+.+.+.||+|+||.||+|.... +..+++|...+.      ....|+.+++.++|+||+++++++...+..++++|
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence            34457778899999999999999764 567888875432      23458999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++. +++.+++......+++..+..++.|++.||.|||++   +|+||||||+||+++..+.++|+|||+|++.
T Consensus       138 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  207 (357)
T PHA03209        138 HYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFP  207 (357)
T ss_pred             ccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence            995 588888866556678888888999999999999998   9999999999999999999999999999753

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.92  E-value=1.1e-25  Score=180.66  Aligned_cols=146  Identities=31%  Similarity=0.499  Sum_probs=130.7

Q ss_pred             chhcccCcCcCceEEEEEEc----CCcEEEEEEccchhhHH-HHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           31 GFKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .+.+.||.|.||.|++|+.+    ....||||.++-...+. ...|+.|+.+|.++.||||+++.|+........|++||
T Consensus       632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEy  711 (996)
T KOG0196|consen  632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEY  711 (996)
T ss_pred             EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhh
Confidence            34478999999999999854    24679999998766554 45799999999999999999999998888888999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |++|+|..++.....+++......+...|+.|+.||-++   +.|||||.++|||++.+-..|++|||++++..
T Consensus       712 MENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvle  782 (996)
T KOG0196|consen  712 MENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  782 (996)
T ss_pred             hhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecc
Confidence            999999999988877788888888999999999999998   99999999999999999999999999999773

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.92  E-value=2e-24  Score=160.74  Aligned_cols=140  Identities=23%  Similarity=0.319  Sum_probs=116.6

Q ss_pred             ccCcCcCceEEEEEEcC---CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           35 KVGRGSSGTVYKGAMIN---RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~---~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      .||+|+||.||+|....   ...+++|.+.... ......+.+|+.+++.++|+||+++++.+...+..+++||++++++
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            58999999999996433   3457777765432 2233567889999999999999999999998999999999999999


Q ss_pred             HHHHHhcCCC----CCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          111 LADILFNAEK----QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       111 l~~~l~~~~~----~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      |.+++.....    ...+.....++.|++.|+.|+|+.   +++|+||||+||+++.++.+|++|||++..
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~  149 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALE  149 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccc
Confidence            9999865432    234556677899999999999998   999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=2.4e-24  Score=159.10  Aligned_cols=145  Identities=30%  Similarity=0.430  Sum_probs=127.3

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      .+.+.+.||.|++|.||+|... ++.+++|.+..... ...++.+|+.+++.++|+|++++.+++.+.+..+++||++++
T Consensus         7 ~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   84 (256)
T cd05039           7 ELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK   84 (256)
T ss_pred             hccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence            4556788999999999999765 67789999876543 456788899999999999999999999888999999999999


Q ss_pred             CCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++.+++.... ..+++..+..++.|++.|+.|+|++   +++|+||+|+||+++.++.++|+|||.++..
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~  152 (256)
T cd05039          85 GSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEA  152 (256)
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccc
Confidence            99999886543 3577888888999999999999998   9999999999999999999999999998854

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.92  E-value=2.8e-24  Score=159.67  Aligned_cols=146  Identities=26%  Similarity=0.362  Sum_probs=126.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+..........+.+|+.+++.++|||++++.+.+...+..++++||++
T Consensus        10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~   89 (267)
T cd06645          10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG   89 (267)
T ss_pred             HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Confidence            4566778999999999999865 577889988765433444567789999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+++... ..+++.....++.|++.|+.|+|+.   +++|+||+|+||+++.++.++|+|||++...
T Consensus        90 ~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd06645          90 GGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQI  156 (267)
T ss_pred             CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEc
Confidence            99999988543 3567788888999999999999998   9999999999999999999999999998643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.92  E-value=1.4e-24  Score=179.62  Aligned_cols=147  Identities=24%  Similarity=0.285  Sum_probs=126.6

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||+|... .+..+++|.+....   ......+..|+.++..++|++|++++..+...+..++|||
T Consensus         5 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmE   84 (669)
T cd05610           5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVME   84 (669)
T ss_pred             CEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEe
Confidence            3556788999999999999976 57889999886432   2223567889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |+++++|.+++... ..+.+.....++.|++.||.|||..   +|+|+||||+||+++.++.++|+|||+|+...
T Consensus        85 y~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~  155 (669)
T cd05610          85 YLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSKVTL  155 (669)
T ss_pred             CCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCcccc
Confidence            99999999988653 3456777788999999999999997   99999999999999999999999999998653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.92  E-value=3.2e-24  Score=159.33  Aligned_cols=142  Identities=20%  Similarity=0.312  Sum_probs=118.8

Q ss_pred             cccCcCcCceEEEEEEcC-------------CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEE
Q 048219           34 EKVGRGSSGTVYKGAMIN-------------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~-------------~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (183)
                      +.||+|+||.||+|....             ...+++|.+..........+.+|+.++..++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            358999999999997421             2247777776544444557788999999999999999999999888899


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc-------cccccee
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC-------AKNFRLW  173 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~-------~~i~dfg  173 (183)
                      ++||+++++++..++......+++.....++.|++.|+.|+|+.   +++|+||+|+||+++.++.       ++++|||
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g  157 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDPG  157 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence            99999999999888865555577888888999999999999998   9999999999999987654       8999999


Q ss_pred             ccccc
Q 048219          174 IGKVD  178 (183)
Q Consensus       174 ~a~~~  178 (183)
                      ++...
T Consensus       158 ~~~~~  162 (262)
T cd05077         158 IPITV  162 (262)
T ss_pred             CCccc
Confidence            98754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.92  E-value=3.5e-24  Score=158.63  Aligned_cols=140  Identities=22%  Similarity=0.345  Sum_probs=119.5

Q ss_pred             ccCcCcCceEEEEEEc---CCcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           35 KVGRGSSGTVYKGAMI---NRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~---~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      .||+|+||.||+|...   .+..+++|.+..... .....+.+|+.+++.++|+|++++.+++. ....+++|||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            4899999999998754   345688888865432 23456889999999999999999999875 457889999999999


Q ss_pred             HHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       111 l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |.+++......+++..+..++.|++.|+.|+|++   +++|+||+|+||+++.++.++++|||+++..
T Consensus        81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~  145 (257)
T cd05115          81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKAL  145 (257)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccc
Confidence            9998865555678888889999999999999998   9999999999999999999999999999744

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.8e-24  Score=165.66  Aligned_cols=138  Identities=25%  Similarity=0.218  Sum_probs=115.9

Q ss_pred             cCcCcCceEEEEEEc-CCcEEEEEEccchhhH---HHHHHHHHHHHHhhc---CCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           36 VGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE---REREFQTEIKVIGRT---HHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        36 lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      ||+|+||.||+|... .+..+++|.+.+....   .......|..++...   .||+++++...+...+..+++|||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            699999999999865 4788999998653221   223344566666554   699999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ++|...+... ..+++..+..++.|++.|+.|||++   +|+||||||+||+++.++.++|+|||+|+.
T Consensus        81 g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~  145 (330)
T cd05586          81 GELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKA  145 (330)
T ss_pred             ChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcC
Confidence            9998888653 4467778888999999999999998   999999999999999999999999999875

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.92  E-value=2e-24  Score=161.45  Aligned_cols=147  Identities=27%  Similarity=0.443  Sum_probs=125.6

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC------CcEEEEEEccchhhH-HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDE-REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~------~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (183)
                      ..+.+.+.||+|+||.||+|....      +..+++|.+...... ....+.+|+.++..+.|+|++++++++......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            346677889999999999997532      467899988754333 3467889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCC-------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcc
Q 048219          101 LVYEYMSNGSLADILFNAE-------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCA  167 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~-------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~  167 (183)
                      ++|||+++++|.+++....             ..+++.....++.|++.|+.++|++   +++|+||+|+||+++.++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence            9999999999999986432             2355667778899999999999998   99999999999999999999


Q ss_pred             cccceecccc
Q 048219          168 KNFRLWIGKV  177 (183)
Q Consensus       168 ~i~dfg~a~~  177 (183)
                      +++|||+++.
T Consensus       162 kl~d~g~~~~  171 (280)
T cd05049         162 KIGDFGMSRD  171 (280)
T ss_pred             EECCccccee
Confidence            9999999974

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.92  E-value=3.8e-24  Score=160.05  Aligned_cols=147  Identities=27%  Similarity=0.370  Sum_probs=125.3

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-C----cEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-R----QLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-~----~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      ..+.+.+.||+|+||.||+|.... +    ..+++|.+.... ......+.+|+.+++.++|+|++++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            345566789999999999998542 2    257888776543 3345678889999999999999999999877 78899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|+++++++.+.+......+++.....++.|++.|+.|+|++   +++|+|++|+||+++.++.++|+|||+|+..
T Consensus        86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~  159 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL  159 (279)
T ss_pred             EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccc
Confidence            9999999999999876555678888889999999999999997   9999999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.92  E-value=5.9e-26  Score=165.90  Aligned_cols=145  Identities=28%  Similarity=0.399  Sum_probs=130.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .-+.+.++||+|++|.||+|..+ .|+.+++|.+--  ..+...+..|+.++++...+.+|+++|.|.-...+++|||||
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC  110 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC  110 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence            33456678999999999999976 488899998743  245677889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      -.|++.+.+..+++.+.+..+..+....+.||.|||..   .-+|||+|+.|||++.+|.+|++|||.|.-
T Consensus       111 GAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQ  178 (502)
T KOG0574|consen  111 GAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQ  178 (502)
T ss_pred             CCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccch
Confidence            99999999988888899999999999999999999997   889999999999999999999999999863

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.92  E-value=2.3e-24  Score=163.29  Aligned_cols=147  Identities=29%  Similarity=0.442  Sum_probs=122.4

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-Cc--EEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-RQ--LVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-~~--~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      ..+.+.+.||+|+||.||+|.... +.  .+++|.+.... ......+.+|+.++.++ +|+|++++++++...+..+++
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            345677889999999999998653 33  45676665422 23345678899999999 899999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcc
Q 048219          103 YEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCA  167 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~  167 (183)
                      |||+++++|.+++....               ..+++..+..++.|++.|+.|||++   +++|+||||+||+++.++.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~  163 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA  163 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcE
Confidence            99999999999886432               2356777888999999999999998   99999999999999999999


Q ss_pred             cccceecccc
Q 048219          168 KNFRLWIGKV  177 (183)
Q Consensus       168 ~i~dfg~a~~  177 (183)
                      +|+|||+++.
T Consensus       164 kl~dfg~~~~  173 (303)
T cd05088         164 KIADFGLSRG  173 (303)
T ss_pred             EeCccccCcc
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.92  E-value=2.2e-24  Score=180.19  Aligned_cols=146  Identities=19%  Similarity=0.236  Sum_probs=123.8

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      |.+.+.||+|+||.||+|... .+..+++|.+....   .....++.+|+.++..++|||++++++++.+.+..+++|||
T Consensus         4 YeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY   83 (932)
T PRK13184          4 YDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPY   83 (932)
T ss_pred             eEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEc
Confidence            556678999999999999876 47889999886432   22345688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCC----------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecc
Q 048219          106 MSNGSLADILFNAE----------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIG  175 (183)
Q Consensus       106 ~~~~~l~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a  175 (183)
                      ++|++|.+++....          ..........++.|++.||.|+|+.   +++||||||+||+++.++.++|+|||+|
T Consensus        84 ~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGLA  160 (932)
T PRK13184         84 IEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGAA  160 (932)
T ss_pred             CCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecCcc
Confidence            99999999885421          1123445667889999999999998   9999999999999999999999999999


Q ss_pred             ccc
Q 048219          176 KVD  178 (183)
Q Consensus       176 ~~~  178 (183)
                      +..
T Consensus       161 k~i  163 (932)
T PRK13184        161 IFK  163 (932)
T ss_pred             eec
Confidence            865

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.92  E-value=1.8e-24  Score=169.51  Aligned_cols=153  Identities=22%  Similarity=0.355  Sum_probs=125.0

Q ss_pred             HHHHHHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcC-CCceeeeeceEE
Q 048219           23 AELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTH-HRNLVRLLGYSL   94 (183)
Q Consensus        23 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~   94 (183)
                      .++....+.+.+.||+|+||.||+|+..      .+..+++|.+.... ......+..|+.++..+. |+||+++++++.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            3344445666789999999999999853      24579999987542 223346888999999997 999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHhcCC-------------------------------------------------------
Q 048219           95 EVSKKILVYEYMSNGSLADILFNAE-------------------------------------------------------  119 (183)
Q Consensus        95 ~~~~~~lv~e~~~~~~l~~~l~~~~-------------------------------------------------------  119 (183)
                      ..+..+++|||+++|+|.+++....                                                       
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP  191 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence            8899999999999999999885421                                                       


Q ss_pred             ------------------------------------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCC
Q 048219          120 ------------------------------------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQ  157 (183)
Q Consensus       120 ------------------------------------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~  157 (183)
                                                                ..+.+.....++.|++.||.|+|+.   +++|+||||+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~  268 (401)
T cd05107         192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAAR  268 (401)
T ss_pred             hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcc
Confidence                                                      1123445566888999999999997   9999999999


Q ss_pred             CEEecCCCcccccceeccccc
Q 048219          158 NILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       158 nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||+++.++.++++|||+++..
T Consensus       269 NiLl~~~~~~kL~DfGla~~~  289 (401)
T cd05107         269 NVLICEGKLVKICDFGLARDI  289 (401)
T ss_pred             eEEEeCCCEEEEEecCcceec
Confidence            999999999999999999854

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.92  E-value=3.7e-24  Score=157.98  Aligned_cols=144  Identities=31%  Similarity=0.466  Sum_probs=126.3

Q ss_pred             cccCcCcCceEEEEEEcC----CcEEEEEEccchhhH-HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           34 EKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDE-REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      +.||+|+||.||+|....    +..+++|.+...... ....+..|+..+..++|++++++++++......+++||++++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            358999999999998653    677889988754333 256788999999999999999999999998899999999999


Q ss_pred             CCHHHHHhcC--------CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          109 GSLADILFNA--------EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       109 ~~l~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      ++|.+++...        ...+++.....++.|++.|+.++|++   +++|+|++|+||+++.++.++++|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence            9999999765        35678888899999999999999998   999999999999999999999999999986543

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.92  E-value=1.9e-24  Score=163.41  Aligned_cols=146  Identities=25%  Similarity=0.344  Sum_probs=124.4

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .|.+.+.||.|+||.||+|... ++..+++|.+.... ......+.+|+.+++.++|+||+++++++...+..+++|||+
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~   86 (301)
T cd07873           7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL   86 (301)
T ss_pred             ceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEecc
Confidence            3556678999999999999865 57789999875322 222345678999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      + +++.+.+......+++..+..++.|++.||.|+|++   +++|+||+|+||+++.++.++++|||+++..
T Consensus        87 ~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~  154 (301)
T cd07873          87 D-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAK  154 (301)
T ss_pred             c-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhcc
Confidence            7 588888866555677778888999999999999998   9999999999999999999999999998753

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.92  E-value=4.7e-24  Score=160.57  Aligned_cols=148  Identities=25%  Similarity=0.388  Sum_probs=125.9

Q ss_pred             HHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      ..+.+...||+|+||.||.+...      .+..+++|.+..........+.+|+.+++.++|+|++++.+++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            34566678999999999998743      245578888776555555678899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc
Q 048219          102 VYEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC  166 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~  166 (183)
                      +|||+++++|.+++....               ..+++..+..++.|++.|+.|+|++   +++|+||+|+||+++.++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence            999999999999986422               2356777888999999999999998   9999999999999999999


Q ss_pred             ccccceeccccc
Q 048219          167 AKNFRLWIGKVD  178 (183)
Q Consensus       167 ~~i~dfg~a~~~  178 (183)
                      ++++|||+|+..
T Consensus       162 ~~l~dfg~a~~~  173 (291)
T cd05094         162 VKIGDFGMSRDV  173 (291)
T ss_pred             EEECCCCccccc
Confidence            999999999754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=8.8e-26  Score=166.39  Aligned_cols=145  Identities=23%  Similarity=0.231  Sum_probs=126.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      ..+.+.||+|+||.|.+++.+ .++.+|+|++++..   .+.....+.|.++|+..+||.+..+...|++.+++|+||||
T Consensus       170 FdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMey  249 (516)
T KOG0690|consen  170 FDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEY  249 (516)
T ss_pred             hhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEE
Confidence            456688999999999999865 58899999997642   33456778899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +.||.|+-.+... +.+++.....+..+|..||.|||++   +|+.||+|.+|.++|.+|++||.|||+++..
T Consensus       250 anGGeLf~HLsre-r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~  318 (516)
T KOG0690|consen  250 ANGGELFFHLSRE-RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEE  318 (516)
T ss_pred             ccCceEeeehhhh-hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhc
Confidence            9999998878654 4456666667889999999999998   9999999999999999999999999999864

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.92  E-value=8.4e-25  Score=169.84  Aligned_cols=143  Identities=24%  Similarity=0.376  Sum_probs=121.0

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      +.||.|.||+||-|..+ +|+.||+|.+.+..  ......+.+|+.+|+.+.||.|+.+.-.|+++++++.|||-+.| +
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-D  648 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-D  648 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-h
Confidence            68999999999999865 68999999998643  33446789999999999999999999999999999999999955 6


Q ss_pred             HHHH-HhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC---Ccccccceeccccccc
Q 048219          111 LADI-LFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN---RCAKNFRLWIGKVDEA  180 (183)
Q Consensus       111 l~~~-l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~---~~~~i~dfg~a~~~~~  180 (183)
                      ..+. +..+..-+++.....++.||+.||.|||..   +|+|+||||+|+|+...   -.+||||||+|++...
T Consensus       649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE  719 (888)
T KOG4236|consen  649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE  719 (888)
T ss_pred             HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch
Confidence            5554 444445566766677889999999999998   99999999999999754   4799999999998754

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.92  E-value=4.3e-24  Score=158.60  Aligned_cols=147  Identities=20%  Similarity=0.326  Sum_probs=124.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch---hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV---LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||+|... ++..+++|.+...   .......+.+|+.+++.++|||++++.+.+.+.+..++++|+
T Consensus         4 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   83 (267)
T cd08228           4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLEL   83 (267)
T ss_pred             eeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEe
Confidence            456778999999999999865 5788899876432   223345678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++++.+++..   ....++......++.|++.|+.|+|++   +++|+||+|+||+++.++.++++|||++....
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~  157 (267)
T cd08228          84 ADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             cCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence            999999887753   223456677788999999999999998   99999999999999999999999999988653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.92  E-value=3.5e-24  Score=160.12  Aligned_cols=148  Identities=24%  Similarity=0.370  Sum_probs=122.8

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   99 (183)
                      ...+.+.+.||+|+||.||+|...      .+..+++|.+.... ......+.+|+.+++.++|+|++++++++......
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~   84 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   84 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCe
Confidence            345667789999999999998753      23568888875432 22345678899999999999999999999888899


Q ss_pred             EEEEeccCCCCHHHHHhcCC---------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccc
Q 048219          100 ILVYEYMSNGSLADILFNAE---------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNF  170 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~  170 (183)
                      +++|||+++++|.+++....         ....+.....++.|++.|+.|+|+.   +++|+||||+||+++.++.++++
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l~  161 (277)
T cd05062          85 LVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEEC
Confidence            99999999999999885422         1234566777899999999999998   99999999999999999999999


Q ss_pred             ceecccc
Q 048219          171 RLWIGKV  177 (183)
Q Consensus       171 dfg~a~~  177 (183)
                      |||+|+.
T Consensus       162 dfg~~~~  168 (277)
T cd05062         162 DFGMTRD  168 (277)
T ss_pred             CCCCccc
Confidence            9999874

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.92  E-value=3.1e-24  Score=160.76  Aligned_cols=147  Identities=26%  Similarity=0.397  Sum_probs=125.0

Q ss_pred             HHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      ....+.+.||+|+||.||++...      .+..+++|.+..........+.+|+.+++.++|+|++++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            34556789999999999998632      245678888766555555678899999999999999999999998899999


Q ss_pred             EEeccCCCCHHHHHhcCC--------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcc
Q 048219          102 VYEYMSNGSLADILFNAE--------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCA  167 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~  167 (183)
                      +||++++++|.+++....              ..+.+..+..++.|++.|+.|+|++   +++|+||+|+||++++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence            999999999999886532              2356777788899999999999998   99999999999999999999


Q ss_pred             cccceecccc
Q 048219          168 KNFRLWIGKV  177 (183)
Q Consensus       168 ~i~dfg~a~~  177 (183)
                      +|+|||+++.
T Consensus       162 kL~dfg~~~~  171 (280)
T cd05092         162 KIGDFGMSRD  171 (280)
T ss_pred             EECCCCceeE
Confidence            9999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.92  E-value=3.3e-24  Score=162.01  Aligned_cols=146  Identities=27%  Similarity=0.353  Sum_probs=127.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ..+.+.+.||+|++|.||++... .++.+++|.+..........+.+|+.+++.++|+|++++.+.+...+..+++|||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            44666778999999999999864 57889999886544444566788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++.+++..  ..+++..+..++.|++.++.|||+.   +++|+||+|+||+++.++.++++|||++...
T Consensus        99 ~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~  165 (297)
T cd06656          99 AGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI  165 (297)
T ss_pred             CCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEc
Confidence            99999998854  3466777888999999999999998   9999999999999999999999999998743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.92  E-value=2.6e-24  Score=167.36  Aligned_cols=143  Identities=24%  Similarity=0.319  Sum_probs=121.2

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC-----eEEEE
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS-----KKILV  102 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv  102 (183)
                      .+.+.||+|+||.||++... ++..+++|.+....  ......+.+|+.+++.++|+||+++++++...+     ..+++
T Consensus         3 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv   82 (372)
T cd07853           3 EPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVV   82 (372)
T ss_pred             cccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEE
Confidence            35578999999999999865 57889999886432  223456889999999999999999999998766     78999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +||+. +++.+.+.. ...+++..+..++.|++.||.|||+.   +++|+||||+||+++.++.++|+|||+|+..
T Consensus        83 ~e~~~-~~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~  153 (372)
T cd07853          83 TELMQ-SDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVE  153 (372)
T ss_pred             eeccc-cCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeec
Confidence            99996 578777644 34567788888999999999999998   9999999999999999999999999999754

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PHA02988 hypothetical protein; Provisional

Probab=99.92  E-value=3.8e-24  Score=160.71  Aligned_cols=141  Identities=21%  Similarity=0.324  Sum_probs=119.5

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchhhHH---HHHHHHHHHHHhhcCCCceeeeeceEEe----CCeEEEEEecc
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLGYSLE----VSKKILVYEYM  106 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~  106 (183)
                      ..+++|+++.||+|.. ++..+++|.+.......   ...+.+|+.++.+++||||+++++++.+    ....+++|||+
T Consensus        26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~  104 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC  104 (283)
T ss_pred             eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence            3689999999999987 57789999987542222   3567799999999999999999999876    34688999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|+|.+++... ..+++.....++.+++.|+.++|+.  .+++||||+|+||+++.++.+|++|||+++..
T Consensus       105 ~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~  173 (283)
T PHA02988        105 TRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKIL  173 (283)
T ss_pred             CCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhh
Confidence            999999998654 3566777788999999999999973  27889999999999999999999999999853

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=4.8e-24  Score=157.78  Aligned_cols=147  Identities=29%  Similarity=0.394  Sum_probs=128.6

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .+.+.+.+|+|+||.||++... .+..+++|.+..........+..|+.+++.++|+|++++++.+...+..+++||+++
T Consensus         4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~   83 (262)
T cd06613           4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG   83 (262)
T ss_pred             ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC
Confidence            3556678999999999999865 467788888765544455678899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++.+++......+++.....++.|++.|+.|||++   +++|+||+|+||+++.++.++++|||++...
T Consensus        84 ~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~  151 (262)
T cd06613          84 GGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQL  151 (262)
T ss_pred             CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhh
Confidence            9999998866545677888888999999999999998   9999999999999999999999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.92  E-value=3.5e-24  Score=160.24  Aligned_cols=147  Identities=27%  Similarity=0.370  Sum_probs=126.3

Q ss_pred             hchhcccCcCcCceEEEEEEc-----CCcEEEEEEccchhhH-HHHHHHHHHHHHhhcCCCceeeeeceEEe--CCeEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-----NRQLVAVNRLEKVLDE-REREFQTEIKVIGRTHHRNLVRLLGYSLE--VSKKIL  101 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l  101 (183)
                      +.+.+.||+|+||.||++...     .+..+++|.+...... ....+.+|+.+++.+.|+|++++.+++..  ....++
T Consensus         6 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~l   85 (284)
T cd05038           6 LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRL   85 (284)
T ss_pred             chhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEE
Confidence            445578999999999999843     3578999988755433 45678899999999999999999998876  557899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +||+++++++.+++......+++.....++.|++.||.|+|+.   +++|+|++|+||+++.++.++++|||++....
T Consensus        86 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05038          86 IMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVLP  160 (284)
T ss_pred             EEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence            9999999999999976554577888888999999999999998   99999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.92  E-value=4.8e-24  Score=160.32  Aligned_cols=149  Identities=25%  Similarity=0.346  Sum_probs=122.9

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   99 (183)
                      ...+.+.+.||+|+||.||+|...      .+..+++|.+.... ......+.+|+.+++.++|+|++++++.+...+..
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT   84 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence            345677789999999999998643      24468898876432 22334578899999999999999999999888899


Q ss_pred             EEEEeccCCCCHHHHHhcCC---------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccc
Q 048219          100 ILVYEYMSNGSLADILFNAE---------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNF  170 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~  170 (183)
                      +++|||+++++|.+++....         ..........++.|++.|+.|+|++   +++|+||||+||+++.++.++++
T Consensus        85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~  161 (288)
T cd05061          85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIG  161 (288)
T ss_pred             EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEEC
Confidence            99999999999999986421         1224456677899999999999998   99999999999999999999999


Q ss_pred             ceeccccc
Q 048219          171 RLWIGKVD  178 (183)
Q Consensus       171 dfg~a~~~  178 (183)
                      |||+|+..
T Consensus       162 Dfg~~~~~  169 (288)
T cd05061         162 DFGMTRDI  169 (288)
T ss_pred             cCCccccc
Confidence            99998743

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=8e-26  Score=178.72  Aligned_cols=145  Identities=21%  Similarity=0.317  Sum_probs=129.5

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcE-EEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~-~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .|++...||.|+||.||+|..+..+. .|.|.+.....+....++-||++|..+.||+|++++++|...+.++|..|||.
T Consensus        33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~  112 (1187)
T KOG0579|consen   33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG  112 (1187)
T ss_pred             HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence            35566679999999999998776444 45677777666777889999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      ||.+.-.+-..++.+++..+..++.|++.||+|||++   .|+|||||+.|||+.-+|.++++|||.+-
T Consensus       113 GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSA  178 (1187)
T KOG0579|consen  113 GGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSA  178 (1187)
T ss_pred             CchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccc
Confidence            9998888877788899999999999999999999998   99999999999999999999999999875

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.92  E-value=5.6e-24  Score=156.66  Aligned_cols=141  Identities=28%  Similarity=0.440  Sum_probs=124.0

Q ss_pred             ccCcCcCceEEEEEEcCCcEEEEEEccchhhH-HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHHH
Q 048219           35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE-REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLAD  113 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~  113 (183)
                      .||+|+||.||++....++.+++|.+...... ....+..|+.+++.+.|++++++.+++......++++|+++++++.+
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~   81 (251)
T cd05041           2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT   81 (251)
T ss_pred             ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence            58999999999998766888999987754333 45678899999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          114 ILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       114 ~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++.......+......++.+++.++.|+|++   +++|+|++|+||+++.++.++|+|||+++..
T Consensus        82 ~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~  143 (251)
T cd05041          82 FLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREE  143 (251)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccc
Confidence            8865444566777788899999999999998   9999999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.92  E-value=5.2e-24  Score=161.69  Aligned_cols=146  Identities=22%  Similarity=0.249  Sum_probs=123.9

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +.+.+.||+|+||.||++... ++..+++|.+.... ......+.+|++++..++||||+++++.+...+..+++|||++
T Consensus         3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~   82 (308)
T cd06615           3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMD   82 (308)
T ss_pred             ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccC
Confidence            445678999999999999865 46778888775432 2334568889999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+++... ..+++.....++.|++.||.|+|+.  .+++|+|++|+||+++.++.++++|||++...
T Consensus        83 ~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  150 (308)
T cd06615          83 GGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  150 (308)
T ss_pred             CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCcccc
Confidence            99999998654 3466777788999999999999973  28999999999999999999999999998743

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.92  E-value=5.4e-24  Score=159.23  Aligned_cols=146  Identities=25%  Similarity=0.350  Sum_probs=122.0

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCc----EEEEEEccch-hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQ----LVAVNRLEKV-LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~----~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      .+.+.+.||+|+||.||+|... ++.    .+++|.+... .......+.+|+.++..+.|+|++++.+++.. ...+++
T Consensus         8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~   86 (279)
T cd05109           8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLV   86 (279)
T ss_pred             heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEE
Confidence            3455678999999999999854 333    4788887643 23345678889999999999999999998864 456789


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++++++.+.+......+++.....++.|++.||.|+|++   +++|+||||+||+++.++.++|+|||+|+..
T Consensus        87 ~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~  159 (279)
T cd05109          87 TQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (279)
T ss_pred             EEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeec
Confidence            999999999998866555677888888999999999999998   9999999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.92  E-value=6.8e-24  Score=157.91  Aligned_cols=140  Identities=26%  Similarity=0.348  Sum_probs=117.2

Q ss_pred             ccCcCcCceEEEEEEcC---CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           35 KVGRGSSGTVYKGAMIN---RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~---~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      .||+|+||.||+|....   ...+++|.+.... ......+.+|+.+++.++|+|++++++.+.+....+++|||+++++
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            58999999999997543   4567888876433 2333568889999999999999999999988888999999999999


Q ss_pred             HHHHHhcCC----CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          111 LADILFNAE----KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       111 l~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      |.+++....    ....+.....++.|++.|+.|+|+.   +++|+|+||+||+++.++.++++|||+++.
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~  149 (269)
T cd05087          82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHN  149 (269)
T ss_pred             HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccccc
Confidence            999886422    1234555667889999999999998   999999999999999999999999999964

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.92  E-value=7.5e-25  Score=172.73  Aligned_cols=150  Identities=23%  Similarity=0.375  Sum_probs=130.2

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEcC-----CcEEEEEEccc-hhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCe
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRLEK-VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSK   98 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~ik~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   98 (183)
                      +.+....+...||.|.||-||+|.+..     .-.||+|..+. ..+++.+.++.|+.+|+.+.||||+++.|.+. ...
T Consensus       386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~-e~P  464 (974)
T KOG4257|consen  386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV-EQP  464 (974)
T ss_pred             eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee-ccc
Confidence            344445566789999999999998542     34588999887 44666788999999999999999999999985 457


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219           99 KILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .+||||.++.|.|..++......+.......++.|++.+|.|||+.   ++|||||.++||++.....+|++|||+++-.
T Consensus       465 ~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~  541 (974)
T KOG4257|consen  465 MWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYL  541 (974)
T ss_pred             eeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhc
Confidence            8999999999999999988777777777778999999999999998   9999999999999999999999999999854

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.92  E-value=4.9e-24  Score=157.46  Aligned_cols=142  Identities=28%  Similarity=0.320  Sum_probs=122.8

Q ss_pred             cccCcCcCceEEEEEEcC----CcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           34 EKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      +.||+|++|.||+|.+..    ...+++|.+..... .....+..|+.++.+++|+|++++++.+.. ...++++|++++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            358999999999998643    23588998876544 455678899999999999999999999888 889999999999


Q ss_pred             CCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          109 GSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       109 ~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++|.+.+.... ..+.+.....++.|++.||.|+|++   +++|+||+|+||+++.++.++|+|||+++...
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~  148 (257)
T cd05040          80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALP  148 (257)
T ss_pred             CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccc
Confidence            99999986644 4567788888999999999999998   99999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.92  E-value=3.8e-24  Score=161.41  Aligned_cols=146  Identities=23%  Similarity=0.301  Sum_probs=125.6

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH-----HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE-----REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      +.+.+.||+|++|.||+|... .+..+++|.+......     ....+..|+.++..++|+|++++.+++.+.+..+++|
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            445678999999999999865 5788999998654322     2345678999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |++ +++|.+++......+++.....++.|++.||.|+|++   +++|+||+|+||+++.++.++|+|||+++...
T Consensus        82 e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~  153 (298)
T cd07841          82 EFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFG  153 (298)
T ss_pred             ccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence            999 8899999865443577888888999999999999998   99999999999999999999999999998553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.92  E-value=5.6e-24  Score=158.14  Aligned_cols=147  Identities=27%  Similarity=0.452  Sum_probs=125.4

Q ss_pred             HhchhcccCcCcCceEEEEEEcC-C---cEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN-R---QLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~-~---~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+...+.||+|+||.||+|.... +   ..+++|.+.... ......+..|+.+++.++|+|++++.+++...+..+++|
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (268)
T cd05063           6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIIT   85 (268)
T ss_pred             HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEE
Confidence            34556789999999999998642 2   367888876542 233456888999999999999999999999889999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++++++|.+++......+++.....++.|++.|+.|+|+.   +++|+|++|+||+++.++.++++|||++...
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  157 (268)
T cd05063          86 EYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVL  157 (268)
T ss_pred             EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceec
Confidence            99999999998866555677778888999999999999998   9999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.92  E-value=4e-24  Score=161.45  Aligned_cols=144  Identities=27%  Similarity=0.371  Sum_probs=125.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .+.+.+.||+|++|.||++... .+..+++|.+..........+.+|+.+++.+.|+|++++.+.+......+++|||++
T Consensus        21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~  100 (296)
T cd06654          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA  100 (296)
T ss_pred             ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccC
Confidence            4556678999999999999865 577899998765444445678889999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ++++.+++..  ..+++.....++.|++.|+.|+|+.   +++|+||+|+||+++.++.++|+|||++..
T Consensus       101 ~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~  165 (296)
T cd06654         101 GGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ  165 (296)
T ss_pred             CCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchh
Confidence            9999998854  3467778888999999999999998   999999999999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.92  E-value=3.8e-24  Score=159.30  Aligned_cols=146  Identities=21%  Similarity=0.325  Sum_probs=123.7

Q ss_pred             HhchhcccCcCcCceEEEEEEcC----CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+.+.+.||+|+||.||+|....    ...+++|...... ......+.+|+.+++.+.|+|++++.+++.+ ...+++|
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~   85 (270)
T cd05056           7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVM   85 (270)
T ss_pred             hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEE
Confidence            45567889999999999998543    2457888876543 3445678899999999999999999998765 4578999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+++++++.+++......+.+..+..++.+++.|+.|+|+.   +++|+||+|+||+++.++.++++|||+++..
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~  157 (270)
T cd05056          86 ELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYL  157 (270)
T ss_pred             EcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeec
Confidence            99999999999976555577888888999999999999997   9999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=2e-24  Score=171.54  Aligned_cols=140  Identities=22%  Similarity=0.206  Sum_probs=121.0

Q ss_pred             HhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      ++.+...||+|+||.||+|.... +..+++|...      .....+|+.+++.++|+||+++++++...+..+++||++.
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~  243 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR  243 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence            45666789999999999998764 6778888532      1235679999999999999999999999999999999995


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                       +++..++......+++..+..++.|++.||.|||++   +|+||||||+||+++.++.++|+|||+|+..
T Consensus       244 -~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~  310 (461)
T PHA03211        244 -SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFA  310 (461)
T ss_pred             -CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceec
Confidence             688888866555678888899999999999999998   9999999999999999999999999999754

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.92  E-value=4e-24  Score=161.30  Aligned_cols=148  Identities=28%  Similarity=0.378  Sum_probs=123.3

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-----------------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeee
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-----------------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRL   89 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-----------------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~   89 (183)
                      ..+.+.+.||+|+||.||++...                 +...+++|.+.... ......+.+|+.+++.++|+|++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            44677789999999999987532                 12357888876432 2334578899999999999999999


Q ss_pred             eceEEeCCeEEEEEeccCCCCHHHHHhcCC----------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCE
Q 048219           90 LGYSLEVSKKILVYEYMSNGSLADILFNAE----------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI  159 (183)
Q Consensus        90 ~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~ni  159 (183)
                      ++++...+..+++||++++++|.+++....          ....+.....++.|++.|+.|+|+.   +++|+||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni  161 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence            999999999999999999999999886532          1244567788999999999999998   999999999999


Q ss_pred             EecCCCcccccceeccccc
Q 048219          160 LMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       160 l~~~~~~~~i~dfg~a~~~  178 (183)
                      +++.++.++++|||+|+..
T Consensus       162 li~~~~~~~l~dfg~~~~~  180 (296)
T cd05095         162 LVGKNYTIKIADFGMSRNL  180 (296)
T ss_pred             EEcCCCCEEeccCcccccc
Confidence            9999999999999999753

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.92  E-value=3.7e-24  Score=158.91  Aligned_cols=147  Identities=27%  Similarity=0.373  Sum_probs=123.9

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ...+.+.+.||+|+||.||+|.......+++|.+..... ....+..|+.+++.++|+|++++++.+ .....+++||++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~-~~~~~~lv~e~~   82 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYM   82 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEE-CCCCcEEEEEcC
Confidence            345778889999999999999877666789998865322 234678899999999999999998876 445678999999


Q ss_pred             CCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++.+++.... ..+++..+..++.|++.||.|+|+.   +++|+||+|+||+++.++.++|+|||.++..
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~  152 (262)
T cd05071          83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLI  152 (262)
T ss_pred             CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeec
Confidence            9999999986532 3456777788999999999999998   9999999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.92  E-value=5.7e-24  Score=160.06  Aligned_cols=145  Identities=25%  Similarity=0.257  Sum_probs=126.1

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|++|.||++... .++.+++|.+.+..   ......+.+|+.+++++.|+|++++.+.+...+..+++||+
T Consensus         3 y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (290)
T cd05580           3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEY   82 (290)
T ss_pred             eEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEec
Confidence            456678999999999999865 47889999876532   22345688899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+.+... ..++...+..++.|++.||.++|+.   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        83 ~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~  151 (290)
T cd05580          83 VPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRV  151 (290)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCcccc
Confidence            9999999988654 4567777888899999999999998   9999999999999999999999999999864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=4.4e-24  Score=158.08  Aligned_cols=148  Identities=30%  Similarity=0.411  Sum_probs=128.0

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ...+.+.+.||+|+||.||++...+...+++|.+.... .....+.+|+.+++.++|+|++++++++......+++||++
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   83 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM   83 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence            34566778999999999999987777788999886432 23356788999999999999999999998888999999999


Q ss_pred             CCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|.+++.... ..+++.....++.+++.|+.|+|++   +++|+|++|+||+++.++.++++|||+++..
T Consensus        84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~  153 (261)
T cd05034          84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLI  153 (261)
T ss_pred             CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceec
Confidence            9999999886543 4567778888999999999999998   9999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.92  E-value=1.8e-24  Score=159.83  Aligned_cols=144  Identities=37%  Similarity=0.442  Sum_probs=124.4

Q ss_pred             hchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHH--HHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDERE--REFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~--~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      |.+.+.||+|+||.||++.... ++.+++|.+........  .....|+.+++.++|+||+++.+++......+++||++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            3466789999999999999775 56899999876543332  23456999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +++++.+++.. ...+....+..++.|++.||.+||+.   +++|+||+|+||+++.++.++|+|||.+..
T Consensus        81 ~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~  147 (260)
T PF00069_consen   81 PGGSLQDYLQK-NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVK  147 (260)
T ss_dssp             TTEBHHHHHHH-HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEE
T ss_pred             ccccccccccc-cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence            99899998873 24567788888999999999999998   999999999999999999999999999974

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.92  E-value=5.1e-24  Score=159.53  Aligned_cols=145  Identities=23%  Similarity=0.300  Sum_probs=119.6

Q ss_pred             hchhcccCcCcCceEEEEEEcC-Cc----EEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQ----LVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~----~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      +.+.+.||+|+||.||+|.... +.    .+++|.+.... ......+..|+..+..+.|+||+++++++. ....++++
T Consensus         9 ~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~   87 (279)
T cd05111           9 LRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVT   87 (279)
T ss_pred             ceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEE
Confidence            4455789999999999998643 32    46677765332 223356777888889999999999999875 44577899


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++++++|.+++......+++.....++.|++.|+.|+|+.   +++|+||||+||+++.++.+|++|||+++..
T Consensus        88 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~  159 (279)
T cd05111          88 QLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLL  159 (279)
T ss_pred             EeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceec
Confidence            99999999999976556678888888999999999999998   9999999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.92  E-value=7.4e-24  Score=158.60  Aligned_cols=140  Identities=23%  Similarity=0.363  Sum_probs=120.4

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccch-hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV-LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      .+.+.||+|+||.||+|... ++..+++|.+... .......+.+|+.++..+.|||++++++.+...+..+++|||+++
T Consensus         4 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   83 (279)
T cd06619           4 QYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDG   83 (279)
T ss_pred             hheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCC
Confidence            45578999999999999864 5778999987543 233445688999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++....     ..++.....++.|++.|+.|+|+.   +++|+||+|+||+++.++.++++|||++...
T Consensus        84 ~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~  145 (279)
T cd06619          84 GSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQL  145 (279)
T ss_pred             CChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceec
Confidence            9886542     345667778999999999999998   9999999999999999999999999999754

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.92  E-value=8.1e-24  Score=157.51  Aligned_cols=144  Identities=23%  Similarity=0.374  Sum_probs=117.6

Q ss_pred             hhcccCcCcCceEEEEEEcCC---cEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC------CeEE
Q 048219           32 FKEKVGRGSSGTVYKGAMINR---QLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV------SKKI  100 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~~~---~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~  100 (183)
                      +.+.||+|+||.||+|.....   ..+++|.++..  .......+..|+.+++.++|+|++++.+.+...      ...+
T Consensus         3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   82 (272)
T cd05075           3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV   82 (272)
T ss_pred             cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence            457899999999999986543   25788877543  233456788899999999999999999887532      2468


Q ss_pred             EEEeccCCCCHHHHHhcC-----CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecc
Q 048219          101 LVYEYMSNGSLADILFNA-----EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIG  175 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a  175 (183)
                      +++||++++++.+++...     ...+++.....++.|++.|+.|+|++   +++|+||||+||+++.++.++|+|||+|
T Consensus        83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  159 (272)
T cd05075          83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGLS  159 (272)
T ss_pred             EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCcc
Confidence            999999999998877421     23356777788999999999999998   9999999999999999999999999999


Q ss_pred             ccc
Q 048219          176 KVD  178 (183)
Q Consensus       176 ~~~  178 (183)
                      +..
T Consensus       160 ~~~  162 (272)
T cd05075         160 KKI  162 (272)
T ss_pred             ccc
Confidence            864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.92  E-value=5.5e-24  Score=159.84  Aligned_cols=143  Identities=23%  Similarity=0.218  Sum_probs=122.3

Q ss_pred             hhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           32 FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      ..+.||+|+||.||++... +++.+++|.+.....   .....+.+|+.+++.++|++++.+.+.+...+..+++|||++
T Consensus         4 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   83 (285)
T cd05632           4 QYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMN   83 (285)
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEecc
Confidence            4467999999999999865 577899998865321   122346789999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          108 NGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       108 ~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ++++.+.+.... ..+++.....++.|++.|+.|+|+.   +|+|+|++|+||+++.++.++|+|||++..
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~  151 (285)
T cd05632          84 GGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVK  151 (285)
T ss_pred             CccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCccee
Confidence            999988775432 3577888888999999999999998   999999999999999999999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.92  E-value=5.1e-24  Score=161.54  Aligned_cols=150  Identities=23%  Similarity=0.349  Sum_probs=125.3

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEcC--------CcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEe
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMIN--------RQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLE   95 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~~--------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   95 (183)
                      ....+.+.+.||+|+||.||.+....        ...+++|.+.... ......+..|+.++..+ +|+|++++.+++..
T Consensus        16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (307)
T cd05098          16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   95 (307)
T ss_pred             ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence            34567788899999999999987532        2468888886532 23345677899999999 79999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEE
Q 048219           96 VSKKILVYEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNIL  160 (183)
Q Consensus        96 ~~~~~lv~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil  160 (183)
                      .+..+++||++++++|.+++....               ..+.+..+..++.|++.||.|+|++   +++|+||+|+||+
T Consensus        96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil  172 (307)
T cd05098          96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL  172 (307)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheE
Confidence            999999999999999999986532               2356677788999999999999998   9999999999999


Q ss_pred             ecCCCcccccceeccccc
Q 048219          161 MDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       161 ~~~~~~~~i~dfg~a~~~  178 (183)
                      ++.++.++|+|||+|+..
T Consensus       173 l~~~~~~kL~dfg~a~~~  190 (307)
T cd05098         173 VTEDNVMKIADFGLARDI  190 (307)
T ss_pred             EcCCCcEEECCCcccccc
Confidence            999999999999999744

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.92  E-value=9.8e-24  Score=158.00  Aligned_cols=145  Identities=27%  Similarity=0.459  Sum_probs=122.4

Q ss_pred             hchhcccCcCcCceEEEEEEcC------CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      +.+.+.||+|+||.||+|....      ...+++|.+.... ......+.+|+.++..++|+|++++.+++......+++
T Consensus         7 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   86 (283)
T cd05048           7 VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCML   86 (283)
T ss_pred             cchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEE
Confidence            4566789999999999997543      2468888876432 23345688999999999999999999999988899999


Q ss_pred             EeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcc
Q 048219          103 YEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCA  167 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~  167 (183)
                      |||+++++|.+++....               ..+.+.....++.|++.|+.|||++   +++|+||||+||+++.++.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~~~  163 (283)
T cd05048          87 FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGLTV  163 (283)
T ss_pred             EecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCCcE
Confidence            99999999999886431               2355667778999999999999998   99999999999999999999


Q ss_pred             cccceecccc
Q 048219          168 KNFRLWIGKV  177 (183)
Q Consensus       168 ~i~dfg~a~~  177 (183)
                      +|+|||+++.
T Consensus       164 ~L~dfg~~~~  173 (283)
T cd05048         164 KISDFGLSRD  173 (283)
T ss_pred             EECCCcceee
Confidence            9999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.92  E-value=1e-23  Score=156.42  Aligned_cols=146  Identities=20%  Similarity=0.318  Sum_probs=125.9

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch---hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV---LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|++|.||+|... +++.+++|.+...   .......+.+|+.++++++|++++++.+.+...+..+++|||
T Consensus         4 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   83 (267)
T cd08224           4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLEL   83 (267)
T ss_pred             eeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEec
Confidence            566788999999999999876 6788999877532   122345788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcC---CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNA---EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|..++...   ...+++..+..++.+++.|+.|+|+.   +++|+||+|+||+++.++.++++|||+++..
T Consensus        84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~  156 (267)
T cd08224          84 ADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             CCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeec
Confidence            9999999888542   24467778888999999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.92  E-value=3.5e-24  Score=164.95  Aligned_cols=150  Identities=24%  Similarity=0.354  Sum_probs=121.8

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeC-
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEV-   96 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~-   96 (183)
                      ...++.+.+.||+|+||.||+|.+.      .++.+++|.+.... ......+..|+.++..+ .|+|++++++++... 
T Consensus         5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (343)
T cd05103           5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   84 (343)
T ss_pred             chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence            3456778889999999999999742      35679999986532 22345678899999999 589999999988654 


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCC---------------------------------------------------------
Q 048219           97 SKKILVYEYMSNGSLADILFNAE---------------------------------------------------------  119 (183)
Q Consensus        97 ~~~~lv~e~~~~~~l~~~l~~~~---------------------------------------------------------  119 (183)
                      ...+++|||+++++|.+++....                                                         
T Consensus        85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (343)
T cd05103          85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  164 (343)
T ss_pred             CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence            46789999999999998875421                                                         


Q ss_pred             ---------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          120 ---------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       120 ---------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                               ..+++.....++.|++.|+.|+|++   +++|+||||+||+++.++.++++|||+++..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~  229 (343)
T cd05103         165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDI  229 (343)
T ss_pred             hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEeccccccc
Confidence                     1134455567889999999999998   9999999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.92  E-value=4.9e-24  Score=158.17  Aligned_cols=147  Identities=29%  Similarity=0.393  Sum_probs=126.4

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .+.+.+.||+|++|.||+|... .+..+++|.+.... .....+.+|+.+++.++|++++++++++...+..+++|||++
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (263)
T cd05052           7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   85 (263)
T ss_pred             HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence            3456678999999999999865 47788999876542 234567889999999999999999999998899999999999


Q ss_pred             CCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          108 NGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++|.+++.... ..+++..+..++.|++.|+.|+|++   +++|+||+|+||+++.++.++|+|||+++...
T Consensus        86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~  155 (263)
T cd05052          86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT  155 (263)
T ss_pred             CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccc
Confidence            999999886533 3467777888999999999999998   99999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.92  E-value=5.4e-24  Score=158.47  Aligned_cols=140  Identities=23%  Similarity=0.351  Sum_probs=115.2

Q ss_pred             ccCcCcCceEEEEEEcCC---cEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           35 KVGRGSSGTVYKGAMINR---QLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~~---~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      .||+|+||.||++....+   ..+++|.+.... ......+.+|+.+++.++|||++++++.+......+++|||+++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            589999999999875432   234566554332 2345678899999999999999999999999899999999999999


Q ss_pred             HHHHHhcCC---CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          111 LADILFNAE---KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       111 l~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      |.+++....   ..........++.|++.||.|+|+.   +++|+||||+||+++.++.++++|||++..
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~  148 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPS  148 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccc
Confidence            999886532   2234455667889999999999998   999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.92  E-value=7.8e-24  Score=159.33  Aligned_cols=149  Identities=23%  Similarity=0.374  Sum_probs=124.6

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcC------CcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCe
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSK   98 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   98 (183)
                      ...+.+.+.||+|+||.||++....      ...+++|.+.... ......+.+|+.++..+ +|+|++++++++...+.
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~   90 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP   90 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence            3445667889999999999997542      3568888876432 23345678899999999 79999999999998889


Q ss_pred             EEEEEeccCCCCHHHHHhcC---------------CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC
Q 048219           99 KILVYEYMSNGSLADILFNA---------------EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE  163 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~  163 (183)
                      .+++|||+++++|..++...               ...+.+..+..++.|++.|+.|||++   +++|+||+|+||+++.
T Consensus        91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~  167 (293)
T cd05053          91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTE  167 (293)
T ss_pred             eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcC
Confidence            99999999999999988532               23456777788999999999999998   9999999999999999


Q ss_pred             CCcccccceeccccc
Q 048219          164 NRCAKNFRLWIGKVD  178 (183)
Q Consensus       164 ~~~~~i~dfg~a~~~  178 (183)
                      ++.++++|||+++..
T Consensus       168 ~~~~kL~Dfg~~~~~  182 (293)
T cd05053         168 DHVMKIADFGLARDI  182 (293)
T ss_pred             CCeEEeCcccccccc
Confidence            999999999999854

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.92  E-value=1.1e-23  Score=155.27  Aligned_cols=146  Identities=24%  Similarity=0.300  Sum_probs=125.8

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||+|++|.+|++... ++..+++|.+...  .......+..|+.+++.++|+|++++++.+...+..+++|||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA   81 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence            345678999999999999865 5778888887532  2334567888999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|.+++... ....++.....++.+++.|+.|+|+.   +++|+|++|+||+++.++.++++|||+++..
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~  151 (256)
T cd08529          82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLL  151 (256)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceec
Confidence            999999988664 34567777788899999999999998   9999999999999999999999999998854

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.92  E-value=6.7e-24  Score=159.42  Aligned_cols=145  Identities=23%  Similarity=0.235  Sum_probs=122.8

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ...+.||+|+||.||++... .++.+++|.+....   ......+..|+.+++.++|++++.+.+.+.+.+..+++|||+
T Consensus         3 ~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05630           3 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM   82 (285)
T ss_pred             eeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEec
Confidence            34567999999999999866 57789999876432   112245678999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|.+.+.... ..+.+.....++.|++.|+.|+|+.   +++|+||+|+||+++.++.++++|||++...
T Consensus        83 ~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~  152 (285)
T cd05630          83 NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV  152 (285)
T ss_pred             CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeec
Confidence            9999998875432 3467777888999999999999997   9999999999999999999999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.92  E-value=4e-24  Score=164.28  Aligned_cols=149  Identities=25%  Similarity=0.363  Sum_probs=122.3

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEe-CC
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLE-VS   97 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~   97 (183)
                      ..++.+.+.||+|+||.||+|...      +++.+++|.+.... ......+..|+.++.++ .|+|++++++++.. ..
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~   85 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG   85 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence            346778889999999999999632      24679999886432 22345677899999999 79999999998865 45


Q ss_pred             eEEEEEeccCCCCHHHHHhcCC----------------------------------------------------------
Q 048219           98 KKILVYEYMSNGSLADILFNAE----------------------------------------------------------  119 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~----------------------------------------------------------  119 (183)
                      ..++++||+++++|.+++....                                                          
T Consensus        86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (337)
T cd05054          86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL  165 (337)
T ss_pred             CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence            6889999999999998885321                                                          


Q ss_pred             --CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          120 --KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       120 --~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                        ..+++..+..++.|++.||.|+|++   +|+|+||||+||+++.++.++|+|||+|+..
T Consensus       166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~  223 (337)
T cd05054         166 YKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDI  223 (337)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhc
Confidence              1356667778899999999999998   9999999999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.92  E-value=1.1e-23  Score=155.57  Aligned_cols=146  Identities=19%  Similarity=0.213  Sum_probs=125.5

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      |.+.+.||.|+||.+|.+... ++..+++|.+...  .......+.+|+.+++.++|+|++++++++.+.+..+++|||+
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~   81 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA   81 (256)
T ss_pred             ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence            455678999999999988854 4777888886543  2333456789999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|.+.+... ...+++.....++.|++.++.|+|+.   +++|+||+|+||+++.++.++++|||+++..
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~  151 (256)
T cd08221          82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKIL  151 (256)
T ss_pred             CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEc
Confidence            999999988664 34467778888999999999999997   9999999999999999999999999998865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.92  E-value=7.2e-24  Score=162.59  Aligned_cols=154  Identities=25%  Similarity=0.364  Sum_probs=127.1

Q ss_pred             HHHHHHHHhchhcccCcCcCceEEEEEEcC--------CcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeec
Q 048219           22 YAELKKITDGFKEKVGRGSSGTVYKGAMIN--------RQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLG   91 (183)
Q Consensus        22 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~--------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~   91 (183)
                      ..++...++.+.+.||+|+||.||.+....        ...+++|.+.... ......+..|+.++.++ +|+||+++++
T Consensus         6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~   85 (334)
T cd05100           6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLG   85 (334)
T ss_pred             ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence            445555677888999999999999997431        2357888776432 23346788899999999 7999999999


Q ss_pred             eEEeCCeEEEEEeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCC
Q 048219           92 YSLEVSKKILVYEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKP  156 (183)
Q Consensus        92 ~~~~~~~~~lv~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~  156 (183)
                      ++...+..++++||+++++|.+++....               ..+.+..+..++.|++.|+.|||++   +++|+||+|
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp  162 (334)
T cd05100          86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAA  162 (334)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceecccccc
Confidence            9998889999999999999999886421               2345666777899999999999998   999999999


Q ss_pred             CCEEecCCCcccccceeccccc
Q 048219          157 QNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       157 ~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +||+++.++.++|+|||+|+..
T Consensus       163 ~Nill~~~~~~kL~Dfg~~~~~  184 (334)
T cd05100         163 RNVLVTEDNVMKIADFGLARDV  184 (334)
T ss_pred             ceEEEcCCCcEEECCcccceec
Confidence            9999999999999999999753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.92  E-value=8.9e-24  Score=157.12  Aligned_cols=142  Identities=26%  Similarity=0.329  Sum_probs=122.5

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHH
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA  112 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~  112 (183)
                      ..||+|+||.||+|... ++..+++|.+..........+.+|+.+++.++|+|++++.+++...+..++++|++++++|.
T Consensus        14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~   93 (268)
T cd06624          14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS   93 (268)
T ss_pred             EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence            37999999999999865 46779999887655555667889999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCC--ChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC-CCcccccceeccccc
Q 048219          113 DILFNAEKQP--NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE-NRCAKNFRLWIGKVD  178 (183)
Q Consensus       113 ~~l~~~~~~~--~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~-~~~~~i~dfg~a~~~  178 (183)
                      +.+.......  +...+..++.|++.|+.|+|+.   +++|+|++|+||+++. .+.++|+|||++...
T Consensus        94 ~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~  159 (268)
T cd06624          94 ALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL  159 (268)
T ss_pred             HHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence            9886543333  6677777889999999999998   9999999999999986 578999999998643

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.92  E-value=2.4e-24  Score=159.51  Aligned_cols=142  Identities=22%  Similarity=0.299  Sum_probs=118.6

Q ss_pred             cccCcCcCceEEEEEEcC--------CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           34 EKVGRGSSGTVYKGAMIN--------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~--------~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.||+|+||.||+|....        ...+++|.+..........+.+|..+++.+.|+|++++++++......+++|||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            368999999999997542        223666666544444445678899999999999999999999998899999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc--------ccccceecccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC--------AKNFRLWIGKV  177 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~--------~~i~dfg~a~~  177 (183)
                      +++++|.+++......+++.....++.|++.|+.|+|+.   +++|+||||+||+++.++.        ++++|||++..
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            999999999876555677888888999999999999998   9999999999999987765        58999998864


Q ss_pred             c
Q 048219          178 D  178 (183)
Q Consensus       178 ~  178 (183)
                      .
T Consensus       158 ~  158 (258)
T cd05078         158 V  158 (258)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.92  E-value=9.4e-24  Score=159.86  Aligned_cols=151  Identities=23%  Similarity=0.362  Sum_probs=124.9

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEc--------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEE
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMI--------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSL   94 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~--------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~   94 (183)
                      +....+.+.+.||+|+||.||.+...        .+..+++|.+.... ......+.+|+.++..+ +|+|++++.+.+.
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   91 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT   91 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence            34455667789999999999999742        23468888876432 23345688899999999 7999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCE
Q 048219           95 EVSKKILVYEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI  159 (183)
Q Consensus        95 ~~~~~~lv~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~ni  159 (183)
                      .....+++|||+++++|.+++....               ..+++.....++.|++.|+.|||++   +++|+||||+||
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni  168 (304)
T cd05101          92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV  168 (304)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence            9999999999999999999886531               2345566777899999999999998   999999999999


Q ss_pred             EecCCCcccccceeccccc
Q 048219          160 LMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       160 l~~~~~~~~i~dfg~a~~~  178 (183)
                      +++.++.++|+|||+|+..
T Consensus       169 li~~~~~~kl~D~g~~~~~  187 (304)
T cd05101         169 LVTENNVMKIADFGLARDV  187 (304)
T ss_pred             EEcCCCcEEECCCccceec
Confidence            9999999999999999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.92  E-value=4.6e-24  Score=171.37  Aligned_cols=148  Identities=19%  Similarity=0.184  Sum_probs=123.8

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC-------
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS-------   97 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------   97 (183)
                      ..|.+.+.||+|+||.||+|... ++..+++|.+...  .......+.+|+.++..+.|++++++.+.+....       
T Consensus        32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~  111 (496)
T PTZ00283         32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV  111 (496)
T ss_pred             CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence            46778889999999999999865 5788999988543  2334456788999999999999999887765322       


Q ss_pred             -eEEEEEeccCCCCHHHHHhcC---CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccccee
Q 048219           98 -KKILVYEYMSNGSLADILFNA---EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLW  173 (183)
Q Consensus        98 -~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg  173 (183)
                       ..+++|||+++++|.+.+...   ...+.+.....++.|++.||.|+|+.   +++||||||+||+++.++.+||+|||
T Consensus       112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DFG  188 (496)
T PTZ00283        112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFG  188 (496)
T ss_pred             eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEecc
Confidence             367999999999999988643   23567777788999999999999998   99999999999999999999999999


Q ss_pred             ccccc
Q 048219          174 IGKVD  178 (183)
Q Consensus       174 ~a~~~  178 (183)
                      +++..
T Consensus       189 ls~~~  193 (496)
T PTZ00283        189 FSKMY  193 (496)
T ss_pred             cCeec
Confidence            99865

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.92  E-value=8.6e-25  Score=173.96  Aligned_cols=145  Identities=28%  Similarity=0.404  Sum_probs=119.9

Q ss_pred             hhcccCcCcCceEEEEEE-cCCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC------eEEEEE
Q 048219           32 FKEKVGRGSSGTVYKGAM-INRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS------KKILVY  103 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~-~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~  103 (183)
                      -.+.||+|+||.||+++. ..|..+|+|.+.+-. .........|+++|++++|+|||++++.=++..      ...++|
T Consensus        17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm   96 (732)
T KOG4250|consen   17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM   96 (732)
T ss_pred             ehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence            345799999999999994 568999999987632 223456778999999999999999998865433      457999


Q ss_pred             eccCCCCHHHHHhcCC--CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec--CCC--cccccceecccc
Q 048219          104 EYMSNGSLADILFNAE--KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD--ENR--CAKNFRLWIGKV  177 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~--~~~--~~~i~dfg~a~~  177 (183)
                      |||++|||...+.+..  ..+++...+.+...+..||.|||.+   +|+||||||.||++-  ++|  -.||+|||.||-
T Consensus        97 EyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are  173 (732)
T KOG4250|consen   97 EYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE  173 (732)
T ss_pred             eecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence            9999999999997654  4577888888999999999999988   999999999999974  333  478999999996


Q ss_pred             cc
Q 048219          178 DE  179 (183)
Q Consensus       178 ~~  179 (183)
                      .+
T Consensus       174 l~  175 (732)
T KOG4250|consen  174 LD  175 (732)
T ss_pred             CC
Confidence            54

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.92  E-value=6.8e-24  Score=159.17  Aligned_cols=147  Identities=20%  Similarity=0.297  Sum_probs=125.1

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch-hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV-LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +.+.+.||+|+||.||++... .+..+++|.+... .......+.+|+.++..+.|+|++++++.+...+..+++|||++
T Consensus         3 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (286)
T cd06622           3 IEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMD   82 (286)
T ss_pred             hhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecC
Confidence            456678999999999999876 5788999887543 22234568889999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcC--CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNA--EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++.+++...  ...+++.....++.+++.|+.|||+.  .+++|+||+|+||+++.++.++++|||++...
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  153 (286)
T cd06622          83 AGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNL  153 (286)
T ss_pred             CCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            99998887653  23567888888999999999999963  28999999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.92  E-value=7.5e-24  Score=160.42  Aligned_cols=151  Identities=21%  Similarity=0.337  Sum_probs=126.9

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeC
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEV   96 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   96 (183)
                      +....+.+.+.||+|+||.||++...      .+..+++|.+.... ......+.+|+.+++++ +|+|++++.+.+...
T Consensus        32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  111 (302)
T cd05055          32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG  111 (302)
T ss_pred             ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence            34455667789999999999998742      23468888876432 23345688999999999 799999999999989


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecc
Q 048219           97 SKKILVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIG  175 (183)
Q Consensus        97 ~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a  175 (183)
                      +..+++|||+++++|.+++.... ..+++.....++.|++.|+.|+|++   +++|+|++|+||+++.++.++++|||+|
T Consensus       112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~  188 (302)
T cd05055         112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLA  188 (302)
T ss_pred             CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccc
Confidence            99999999999999999886533 3367888888999999999999998   9999999999999999999999999999


Q ss_pred             ccc
Q 048219          176 KVD  178 (183)
Q Consensus       176 ~~~  178 (183)
                      +..
T Consensus       189 ~~~  191 (302)
T cd05055         189 RDI  191 (302)
T ss_pred             ccc
Confidence            854

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.92  E-value=8.4e-24  Score=156.62  Aligned_cols=146  Identities=26%  Similarity=0.372  Sum_probs=124.0

Q ss_pred             HHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      ..+.+.+.||+|+||.||+|....+..+++|.+..... ....+.+|+.++++++|++++++++++. ....+++||+++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~   83 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS   83 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence            34667788999999999999877777789998865322 2346788999999999999999998764 556889999999


Q ss_pred             CCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++.+++.... ..+++..+..++.+++.|+.|+|++   +++|+|++|+||+++.++.++|+|||++...
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~  152 (260)
T cd05070          84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLI  152 (260)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeec
Confidence            999999886532 3467778888999999999999998   9999999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.92  E-value=4.5e-25  Score=159.19  Aligned_cols=146  Identities=27%  Similarity=0.320  Sum_probs=123.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--------hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--------DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSK   98 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--------~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   98 (183)
                      .+.-.+.+|+|..+.|.++..+ +++..++|++.-..        .+-.+....|+.+|+++ .||+|+++.++|++...
T Consensus        18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF   97 (411)
T KOG0599|consen   18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF   97 (411)
T ss_pred             hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence            3455678999999998888755 57788888875211        12234567899999998 59999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219           99 KILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .++|+|.++.|.|++++.. ...+.+.....|++|+..|+.|+|++   .|+||||||+||++|++.+++|.|||+|+-.
T Consensus        98 ~FlVFdl~prGELFDyLts-~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa~~l  173 (411)
T KOG0599|consen   98 VFLVFDLMPRGELFDYLTS-KVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFACQL  173 (411)
T ss_pred             hhhhhhhcccchHHHHhhh-heeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccceeecc
Confidence            9999999999999999965 34567788888999999999999998   9999999999999999999999999999743

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.92  E-value=1.1e-23  Score=156.35  Aligned_cols=146  Identities=18%  Similarity=0.292  Sum_probs=124.6

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|++|.||++... ++..+++|.+....   ......+.+|+.+++.+.|+|++++++.+...+..+++||+
T Consensus         4 y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~   83 (267)
T cd08229           4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL   83 (267)
T ss_pred             hhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEe
Confidence            456678999999999999854 67889998775422   22335678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcC---CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNA---EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++.+++...   ...+++.....++.|++.|+.|||++   +++|+||+|+||+++.++.++++|||++...
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd08229          84 ADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             cCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcc
Confidence            9999999887531   23467778888999999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.92  E-value=1e-23  Score=155.53  Aligned_cols=145  Identities=32%  Similarity=0.479  Sum_probs=126.0

Q ss_pred             hhcccCcCcCceEEEEEEcC-----CcEEEEEEccchhhH-HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           32 FKEKVGRGSSGTVYKGAMIN-----RQLVAVNRLEKVLDE-REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~~-----~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.||.|+||.||++....     +..+++|.+...... ....+..|+..+..++|++++++++.+.+.+..+++||+
T Consensus         3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~   82 (258)
T smart00219        3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY   82 (258)
T ss_pred             ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence            45679999999999998654     377899998654332 456788999999999999999999999998999999999


Q ss_pred             cCCCCHHHHHhcCCCC-CChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQ-PNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++++.+.+...... +++.....++.|++.|+.++|+.   +++|+|++|+||+++.++.++++|||+++...
T Consensus        83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~  154 (258)
T smart00219       83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLY  154 (258)
T ss_pred             cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecc
Confidence            9999999988654433 77888888999999999999998   99999999999999999999999999997553

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.92  E-value=1.2e-23  Score=160.02  Aligned_cols=150  Identities=23%  Similarity=0.364  Sum_probs=124.4

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEc--------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEe
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMI--------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLE   95 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~--------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   95 (183)
                      ....+.+.+.||+|+||.||++...        ....+++|.+.... ......+..|+.+++.+ .|+|++++.+++..
T Consensus        10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (314)
T cd05099          10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ   89 (314)
T ss_pred             cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence            3445667789999999999998742        23467888876432 23345678899999999 59999999999988


Q ss_pred             CCeEEEEEeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEE
Q 048219           96 VSKKILVYEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNIL  160 (183)
Q Consensus        96 ~~~~~lv~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil  160 (183)
                      .+..+++|||+++++|.+++....               ..+.+.....++.|++.||.|+|++   +++|+||||+||+
T Consensus        90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil  166 (314)
T cd05099          90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVL  166 (314)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEE
Confidence            889999999999999999886421               2356677778899999999999998   9999999999999


Q ss_pred             ecCCCcccccceeccccc
Q 048219          161 MDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       161 ~~~~~~~~i~dfg~a~~~  178 (183)
                      ++.++.++++|||+|+..
T Consensus       167 l~~~~~~kL~Dfg~~~~~  184 (314)
T cd05099         167 VTEDNVMKIADFGLARGV  184 (314)
T ss_pred             EcCCCcEEEccccccccc
Confidence            999999999999999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.92  E-value=9.5e-24  Score=159.39  Aligned_cols=145  Identities=26%  Similarity=0.431  Sum_probs=120.5

Q ss_pred             hchhcccCcCcCceEEEEEEcC-C--cEEEEEEccch-hhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-R--QLVAVNRLEKV-LDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~--~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      +.+.+.||+|+||.||+|.... +  ..+++|.++.. .......+.+|+.++.++ .|||++++++++...+..++++|
T Consensus         4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e   83 (297)
T cd05089           4 IKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIE   83 (297)
T ss_pred             ceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEE
Confidence            4566789999999999998653 2  24677776542 223345678899999988 69999999999998889999999


Q ss_pred             ccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccc
Q 048219          105 YMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKN  169 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i  169 (183)
                      ++++++|.+++....               ..+++.....++.|++.|+.|+|++   +++|+||||+||+++.++.++|
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl  160 (297)
T cd05089          84 YAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLASKI  160 (297)
T ss_pred             ecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeEEE
Confidence            999999999885422               2356677788999999999999998   9999999999999999999999


Q ss_pred             cceecccc
Q 048219          170 FRLWIGKV  177 (183)
Q Consensus       170 ~dfg~a~~  177 (183)
                      +|||++..
T Consensus       161 ~dfg~~~~  168 (297)
T cd05089         161 ADFGLSRG  168 (297)
T ss_pred             CCcCCCcc
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.92  E-value=1.2e-23  Score=156.54  Aligned_cols=145  Identities=23%  Similarity=0.369  Sum_probs=119.8

Q ss_pred             chhcccCcCcCceEEEEEEcC----CcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCe------
Q 048219           31 GFKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSK------   98 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------   98 (183)
                      .+.+.||+|+||.||+|....    ...+++|.+....  ......+..|+..++.++|+|++++++.+.....      
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   81 (273)
T cd05035           2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK   81 (273)
T ss_pred             ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence            456789999999999998542    3668999876432  2334568889999999999999999998765443      


Q ss_pred             EEEEEeccCCCCHHHHHhcC-----CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccccee
Q 048219           99 KILVYEYMSNGSLADILFNA-----EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLW  173 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg  173 (183)
                      .++++||++++++...+...     ...+++.....++.|++.||.|+|++   +++|+|+||+||++++++.++++|||
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg  158 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADFG  158 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCcc
Confidence            78999999999999887432     13466777788899999999999998   99999999999999999999999999


Q ss_pred             ccccc
Q 048219          174 IGKVD  178 (183)
Q Consensus       174 ~a~~~  178 (183)
                      +|+..
T Consensus       159 ~~~~~  163 (273)
T cd05035         159 LSKKI  163 (273)
T ss_pred             ceeec
Confidence            99854

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.92  E-value=6.6e-24  Score=157.19  Aligned_cols=149  Identities=28%  Similarity=0.404  Sum_probs=126.1

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      ....+.+.+.||+|+||.||+|...+++.+++|.+..... ....+.+|+.+++.++|+|++++.+.+ ..+..+++||+
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~   81 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEY   81 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEc
Confidence            3455677889999999999999987888899998865332 234678899999999999999999876 45678999999


Q ss_pred             cCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++++.+.+.... ..+++.....++.|++.||.|||+.   +++|+||+|+||+++.++.++++|||++....
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  153 (260)
T cd05067          82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIE  153 (260)
T ss_pred             CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecC
Confidence            99999999886533 3566777788899999999999997   99999999999999999999999999997543

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.91  E-value=2.1e-23  Score=153.98  Aligned_cols=146  Identities=18%  Similarity=0.180  Sum_probs=124.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch-hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV-LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +.+.+.||+|+||.||.+... ++..+++|.+... .......+..|+.+++.++|+|++++.+.+.+.+..++++||++
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD   81 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence            346678999999999999865 5778888887532 23344567789999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++.+.+... ...++......++.|++.|+.++|++   +++|+||+|+||+++.++.++++|||.+...
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~  150 (255)
T cd08219          82 GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLL  150 (255)
T ss_pred             CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceee
Confidence            99999887643 23456777788899999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.91  E-value=8.9e-24  Score=158.30  Aligned_cols=146  Identities=24%  Similarity=0.361  Sum_probs=127.4

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      |.+.+.||+|++|.||+|... ++..+++|.+....  ......+.+|+.+++.++|+|++++.+++......++++|++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   81 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM   81 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence            456678999999999999865 57889999876432  223456888999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                       +++|.+.+......+++..+..++.|++.+|.|+|+.   +++|+||+|+||+++.++.++++|||++....
T Consensus        82 -~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~  150 (286)
T cd07832          82 -PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFS  150 (286)
T ss_pred             -CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeeccccc
Confidence             9999998876556678888888999999999999998   99999999999999999999999999988653

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.91  E-value=5.9e-24  Score=166.44  Aligned_cols=144  Identities=21%  Similarity=0.216  Sum_probs=121.9

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEc---CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMI---NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      +....+.+.+.||+|+||.||+|...   .+..+++|.+...     ....+|+.+++.++|+||+++++++......++
T Consensus        89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l  163 (392)
T PHA03207         89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCM  163 (392)
T ss_pred             hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence            34456778889999999999998753   3467888877543     234579999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +||++. +++.+++.. ...+++..+..++.|++.||.|||+.   +|+||||||+||+++.++.++|+|||+|+..
T Consensus       164 v~e~~~-~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~  235 (392)
T PHA03207        164 VMPKYK-CDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKL  235 (392)
T ss_pred             EehhcC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence            999985 688888743 34577888888999999999999998   9999999999999999999999999999754

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.1e-24  Score=173.69  Aligned_cols=141  Identities=26%  Similarity=0.351  Sum_probs=124.8

Q ss_pred             ccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHHH
Q 048219           35 KVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLAD  113 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~  113 (183)
                      .||+|++|+||-|++.. ...+++|-+..........+.+||.+.+.++|.|||++.|.+-..+.+-|+||.+|||+|.+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            69999999999999775 55688888866555556789999999999999999999999888888899999999999999


Q ss_pred             HHhcCCCCC--ChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC-CCcccccceeccccc
Q 048219          114 ILFNAEKQP--NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE-NRCAKNFRLWIGKVD  178 (183)
Q Consensus       114 ~l~~~~~~~--~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~-~~~~~i~dfg~a~~~  178 (183)
                      ++......+  ++.+.-.+.+||++||.|||++   .|||||||-+|++++. +|.+||+|||-++-.
T Consensus       662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRL  726 (1226)
T KOG4279|consen  662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRL  726 (1226)
T ss_pred             HHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhh
Confidence            998766555  6788888999999999999998   9999999999999985 599999999988743

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.9e-24  Score=167.56  Aligned_cols=148  Identities=22%  Similarity=0.252  Sum_probs=131.9

Q ss_pred             HhchhcccCcCcCceEEEEEE-cCCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           29 TDGFKEKVGRGSSGTVYKGAM-INRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .|.+.+.||+|-|.+|-+|+. .+|..||+|.+.+-.  ......+..|+++|+.++|||||+++++..++..+|+++|.
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence            477888999999999999884 578899999997642  23346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec-CCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD-ENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~-~~~~~~i~dfg~a~~~~  179 (183)
                      -.+|+|++++......+++.....++.||+.|+.|+|.-   .+|||||||+|+++- ..|-+|+.|||++.-+.
T Consensus        99 GD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~  170 (864)
T KOG4717|consen   99 GDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ  170 (864)
T ss_pred             cCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence            999999999998888888888889999999999999987   999999999999976 45999999999998654

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.91  E-value=1e-23  Score=157.93  Aligned_cols=146  Identities=25%  Similarity=0.375  Sum_probs=122.1

Q ss_pred             hchhcccCcCcCceEEEEEEcC------CcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~------~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      +.+.+.||+|+||.||+|....      +..+++|.+..... .....+..|+.++..++|+||+++++++......+++
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~   86 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI   86 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence            4566789999999999997532      46789999874432 2335678899999999999999999999998999999


Q ss_pred             EeccCCCCHHHHHhcC---------------CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcc
Q 048219          103 YEYMSNGSLADILFNA---------------EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCA  167 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~  167 (183)
                      +|+++++++.+++...               ...+.+..+..++.|++.||.|+|++   +++|+||||+||+++.++.+
T Consensus        87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~  163 (283)
T cd05091          87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLNV  163 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCce
Confidence            9999999999988532               12355666777899999999999998   99999999999999999999


Q ss_pred             cccceeccccc
Q 048219          168 KNFRLWIGKVD  178 (183)
Q Consensus       168 ~i~dfg~a~~~  178 (183)
                      |++|||+++..
T Consensus       164 kl~Dfg~~~~~  174 (283)
T cd05091         164 KISDLGLFREV  174 (283)
T ss_pred             Eeccccccccc
Confidence            99999998753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.91  E-value=2.6e-23  Score=153.36  Aligned_cols=144  Identities=30%  Similarity=0.378  Sum_probs=127.8

Q ss_pred             hchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      +.+.+.||+|++|.+|++.... +..+++|.+.....  ...+.+|+.+++.++|+|++++.+.+......++++|++++
T Consensus         5 y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   82 (256)
T cd06612           5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGA   82 (256)
T ss_pred             chhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCC
Confidence            4566789999999999998765 67889998765422  56788999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|.+.+......+++.....++.|++.|+.|+|+.   +++|+|++|+||+++.++.++++|||++...
T Consensus        83 ~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~  149 (256)
T cd06612          83 GSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQL  149 (256)
T ss_pred             CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhc
Confidence            999999876556678888888999999999999998   9999999999999999999999999998864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.91  E-value=5.6e-24  Score=163.42  Aligned_cols=139  Identities=22%  Similarity=0.116  Sum_probs=108.3

Q ss_pred             HhchhcccCcCcCceEEEEEEc--CCcEEEEEEccch-----hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI--NRQLVAVNRLEKV-----LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~ik~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      .|.+.+.||+|+||.||+|...  ++..+++|.+...     .......+.+|+.++..++|++++..+..   .+..++
T Consensus        19 ~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~L   95 (365)
T PRK09188         19 RFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDGL   95 (365)
T ss_pred             CceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcEE
Confidence            4667788999999999999865  4666788875432     12234568899999999999998853322   256899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCC-CCCCEEecCCCcccccceeccccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI-KPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl-~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      +|||++|++|.. ..    ....   ..++.+++.+|.|+|++   +|+|||| ||+||+++.++.++|+|||+|+....
T Consensus        96 VmE~~~G~~L~~-~~----~~~~---~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~  164 (365)
T PRK09188         96 VRGWTEGVPLHL-AR----PHGD---PAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR  164 (365)
T ss_pred             EEEccCCCCHHH-hC----ccch---HHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence            999999999963 21    1111   34678999999999998   9999999 99999999889999999999997654


Q ss_pred             c
Q 048219          181 R  181 (183)
Q Consensus       181 ~  181 (183)
                      +
T Consensus       165 ~  165 (365)
T PRK09188        165 R  165 (365)
T ss_pred             C
Confidence            3

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.91  E-value=1.6e-23  Score=155.38  Aligned_cols=145  Identities=26%  Similarity=0.364  Sum_probs=124.1

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchh------hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      +...+.||+|+||.||+|...++..+++|.+....      ......+.+|+.+++.++|+|++++.+++.+.+..++++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            34556899999999999987778889999875321      122346888999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++++++|.+++... ..+.+..+..++.|++.++.|+|+.   +++|+||+|+||+++.++.++++|||+++..
T Consensus        82 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          82 EFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             ecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            999999999988653 3456777777899999999999998   9999999999999999999999999998753

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.91  E-value=1.9e-23  Score=158.28  Aligned_cols=144  Identities=20%  Similarity=0.221  Sum_probs=123.8

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||++... .++.+++|.+....   ......+.+|+.+++.++|+|++++++.+...+..+++||+
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (305)
T cd05609           3 FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEY   82 (305)
T ss_pred             ceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEec
Confidence            345678999999999999866 46789999876542   22334677899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +++++|.+++... ..+.+.....++.|++.|+.|+|++   +++|+||+|+||+++.++.++++|||+++.
T Consensus        83 ~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~  150 (305)
T cd05609          83 VEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKI  150 (305)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccc
Confidence            9999999998654 3466777777889999999999998   999999999999999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.91  E-value=1.6e-23  Score=156.30  Aligned_cols=148  Identities=24%  Similarity=0.355  Sum_probs=124.3

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcC------CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   99 (183)
                      ...+.+.+.||+|+||.||++....      +..+++|.+.... ......+.+|+.++..++|+|++++++++......
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            3455667889999999999987542      3578899876442 23345678899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCC---------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccc
Q 048219          100 ILVYEYMSNGSLADILFNAE---------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNF  170 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~  170 (183)
                      +++||++++++|.+++....         ..+.+..+..++.|++.|+.|+|+.   +++|+||+|+||+++.++.++|+
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence            99999999999999886421         1245667778899999999999998   99999999999999999999999


Q ss_pred             ceecccc
Q 048219          171 RLWIGKV  177 (183)
Q Consensus       171 dfg~a~~  177 (183)
                      |||+++.
T Consensus       162 dfg~~~~  168 (277)
T cd05032         162 DFGMTRD  168 (277)
T ss_pred             Ccccchh
Confidence            9999874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.91  E-value=1.5e-23  Score=155.40  Aligned_cols=146  Identities=25%  Similarity=0.359  Sum_probs=122.7

Q ss_pred             HHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      ..+.+.+.||+|++|.||++....+..+++|.+.... .....+.+|+.+++.++|++++++.+++. .+..+++||+++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence            3466778899999999999987766678888875432 22346778999999999999999988764 566889999999


Q ss_pred             CCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+++.... ..+++..+..++.|++.|+.|+|+.   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~  152 (260)
T cd05069          84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLI  152 (260)
T ss_pred             CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEc
Confidence            999999886533 3466777888999999999999998   9999999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.91  E-value=1.4e-23  Score=158.06  Aligned_cols=148  Identities=28%  Similarity=0.366  Sum_probs=125.0

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-----------------CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeee
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-----------------RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRL   89 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-----------------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~   89 (183)
                      ..+.+.+.||+|+||.||++....                 ...+++|.+.... ......+..|+.++..++|+|++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            346677899999999999987542                 2347888876543 2344568889999999999999999


Q ss_pred             eceEEeCCeEEEEEeccCCCCHHHHHhcCC----------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCE
Q 048219           90 LGYSLEVSKKILVYEYMSNGSLADILFNAE----------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI  159 (183)
Q Consensus        90 ~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~ni  159 (183)
                      .+++...+..++++|++++++|.+++....          ..+++..+..++.|++.|+.|||++   +++|+||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Ni  161 (296)
T cd05051          85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhce
Confidence            999998899999999999999999886533          2467778888999999999999998   999999999999


Q ss_pred             EecCCCcccccceeccccc
Q 048219          160 LMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       160 l~~~~~~~~i~dfg~a~~~  178 (183)
                      +++.++.++++|||+++..
T Consensus       162 li~~~~~~~l~dfg~~~~~  180 (296)
T cd05051         162 LVGKNYTIKIADFGMSRNL  180 (296)
T ss_pred             eecCCCceEEccccceeec
Confidence            9999999999999998853

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.91  E-value=1.3e-23  Score=157.49  Aligned_cols=143  Identities=27%  Similarity=0.381  Sum_probs=120.8

Q ss_pred             chhcccCcCcCceEEEEEE-----cCCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC--CeEEEE
Q 048219           31 GFKEKVGRGSSGTVYKGAM-----INRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV--SKKILV  102 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~-----~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv  102 (183)
                      .+.+.||+|+||.||.+..     ..+..+++|.+.... ......+.+|+.+++.++|+|++++.+++...  ...+++
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            5667899999999987653     245678999886542 23345678899999999999999999987653  457899


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||+++++++.+++..  ..+++..+..++.|++.|+.|+|++   +++|+||||+||+++.++.++++|||+++..
T Consensus        87 ~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~  157 (283)
T cd05080          87 MEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV  157 (283)
T ss_pred             ecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccccc
Confidence            999999999998855  3477888888999999999999998   9999999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.91  E-value=1.3e-23  Score=156.77  Aligned_cols=146  Identities=27%  Similarity=0.400  Sum_probs=123.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchhhH-HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVLDE-REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      .+.+.+.||+|+||.||+|...      ..+.+++|.+...... ....+.+|+.++++++|+|++++++++...+..++
T Consensus         6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   85 (275)
T cd05046           6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYM   85 (275)
T ss_pred             hceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceE
Confidence            3455678999999999999854      2356888887654333 34568889999999999999999999988888999


Q ss_pred             EEeccCCCCHHHHHhcCC--------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccccee
Q 048219          102 VYEYMSNGSLADILFNAE--------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLW  173 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~--------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg  173 (183)
                      +||++++++|.+++....        ..+++..+..++.|++.+|.|||+.   +++|+||+|+||+++.++.++++|||
T Consensus        86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~~  162 (275)
T cd05046          86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLS  162 (275)
T ss_pred             EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcccc
Confidence            999999999999886533        1467788888999999999999998   99999999999999999999999999


Q ss_pred             cccc
Q 048219          174 IGKV  177 (183)
Q Consensus       174 ~a~~  177 (183)
                      +++.
T Consensus       163 ~~~~  166 (275)
T cd05046         163 LSKD  166 (275)
T ss_pred             cccc
Confidence            9874

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.91  E-value=9.6e-24  Score=158.70  Aligned_cols=144  Identities=25%  Similarity=0.333  Sum_probs=122.6

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +.+.+.||+|++|.||+|... ++..+++|.+..... .....+.+|+.+++.++|+|++++.+++.+.+..+++|||++
T Consensus         7 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (291)
T cd07844           7 YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD   86 (291)
T ss_pred             eeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC
Confidence            455678999999999999876 577899998764321 112346689999999999999999999999999999999997


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      + ++.+++......+.+.....++.|++.||.|+|++   +++|+||+|+||+++.++.++++|||+++.
T Consensus        87 ~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~  152 (291)
T cd07844          87 T-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARA  152 (291)
T ss_pred             C-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccc
Confidence            5 89888866555567777888899999999999998   999999999999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.91  E-value=2.4e-23  Score=154.21  Aligned_cols=140  Identities=26%  Similarity=0.472  Sum_probs=116.7

Q ss_pred             ccCcCcCceEEEEEEcC----CcEEEEEEccch-hhHHHHHHHHHHHHHhhcCCCceeeeeceEEe-CCeEEEEEeccCC
Q 048219           35 KVGRGSSGTVYKGAMIN----RQLVAVNRLEKV-LDEREREFQTEIKVIGRTHHRNLVRLLGYSLE-VSKKILVYEYMSN  108 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~  108 (183)
                      .||+|+||.||+|....    ...+++|.+... .......+..|+.+++.++|||++++++++.. .+..++++|++++
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~   81 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH   81 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence            58999999999997532    356888887542 23344567889999999999999999997764 5567899999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +++.+++........+.....++.|++.|+.|+|+.   +++|+||+|+||+++.++.++++|||+++.
T Consensus        82 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~  147 (262)
T cd05058          82 GDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARD  147 (262)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCcccccc
Confidence            999999865444456666777889999999999998   999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.91  E-value=2.1e-23  Score=156.86  Aligned_cols=145  Identities=23%  Similarity=0.381  Sum_probs=120.7

Q ss_pred             chhcccCcCcCceEEEEEEcC------CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           31 GFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~~------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+.+.||+|+||.||+|....      ...+++|.+.... ......+.+|+.+++.+.||||+++++.+...+..++++
T Consensus         3 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (290)
T cd05045           3 VLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIV   82 (290)
T ss_pred             cccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEE
Confidence            355689999999999997532      2457777765432 233457888999999999999999999999889999999


Q ss_pred             eccCCCCHHHHHhcCC-----------------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEE
Q 048219          104 EYMSNGSLADILFNAE-----------------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNIL  160 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil  160 (183)
                      ||++++++.+++....                       ..+++.....++.|++.|+.|||++   +++|+||+|+||+
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~nil  159 (290)
T cd05045          83 EYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARNVL  159 (290)
T ss_pred             EecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---CeehhhhhhheEE
Confidence            9999999999875421                       2345667788899999999999998   9999999999999


Q ss_pred             ecCCCcccccceeccccc
Q 048219          161 MDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       161 ~~~~~~~~i~dfg~a~~~  178 (183)
                      ++.++.++|+|||+++..
T Consensus       160 l~~~~~~kl~dfg~~~~~  177 (290)
T cd05045         160 VAEGRKMKISDFGLSRDV  177 (290)
T ss_pred             EcCCCcEEeccccccccc
Confidence            999999999999999753

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.91  E-value=2.1e-23  Score=159.52  Aligned_cols=141  Identities=20%  Similarity=0.220  Sum_probs=120.2

Q ss_pred             hhcccCcC--cCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           32 FKEKVGRG--SSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        32 ~~~~lg~g--~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.||+|  +|+.||++... ++..+++|.+....  ......+.+|+.+++.++||||+++++++...+..+++|||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            45679999  67889999865 57889999986532  223456778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecc
Q 048219          107 SNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIG  175 (183)
Q Consensus       107 ~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a  175 (183)
                      +++++.+++... ...+++..+..++.|++.||.|+|++   +++|+||||+||+++.++.+++.||+.+
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~  148 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSN  148 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchh
Confidence            999999988653 23467788888999999999999998   9999999999999999999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.91  E-value=8.3e-24  Score=163.74  Aligned_cols=144  Identities=22%  Similarity=0.297  Sum_probs=118.8

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC------e
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS------K   98 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~   98 (183)
                      ..|.+.+.||+|+||.||++... .+..+++|.+....  ......+.+|+.++..++|+||+++++++....      .
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  100 (359)
T cd07876          21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD  100 (359)
T ss_pred             hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence            45667789999999999999865 47889999986432  233456778999999999999999999886443      4


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219           99 KILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .+++|||+.+ ++.+.+..   .++...+..++.|++.||.|||++   +++||||||+||+++.++.++|+|||+|+..
T Consensus       101 ~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~  173 (359)
T cd07876         101 VYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  173 (359)
T ss_pred             eEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence            7899999965 56665532   356667777899999999999998   9999999999999999999999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.91  E-value=1.3e-23  Score=155.58  Aligned_cols=147  Identities=23%  Similarity=0.350  Sum_probs=124.4

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ..++.+.+.||+|+||.||++....+..+++|.+.... .....+.+|+.+++.++|++++++.+.+.. ...+++||++
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~   82 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM   82 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence            34566778999999999999987777778898876532 234567889999999999999999988876 7789999999


Q ss_pred             CCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++.+++.... ...++..+..++.|++.|+.|+|+.   +++|+||+|+||+++..+.++++|||.+...
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~  152 (260)
T cd05073          83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVI  152 (260)
T ss_pred             CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeec
Confidence            9999999886532 3456667777899999999999997   9999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.91  E-value=3.1e-23  Score=154.48  Aligned_cols=139  Identities=30%  Similarity=0.468  Sum_probs=117.3

Q ss_pred             ccCcCcCceEEEEEEcC-C--cEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMIN-R--QLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~-~--~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||++.... +  ..+++|.+.... ......+.+|+.++.++ .|||++++++++...+..+++||+++++
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG   81 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence            58999999999998654 3  246777776432 33345688899999999 7999999999999888999999999999


Q ss_pred             CHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceec
Q 048219          110 SLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWI  174 (183)
Q Consensus       110 ~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~  174 (183)
                      +|.+++....               ..+.+..+..++.|++.|+.|+|+.   +++|+||+|+||+++.++.++++|||+
T Consensus        82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfgl  158 (270)
T cd05047          82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGL  158 (270)
T ss_pred             cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCCC
Confidence            9999886422               1356677788999999999999997   999999999999999999999999999


Q ss_pred             cc
Q 048219          175 GK  176 (183)
Q Consensus       175 a~  176 (183)
                      ++
T Consensus       159 ~~  160 (270)
T cd05047         159 SR  160 (270)
T ss_pred             cc
Confidence            85

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.8e-23  Score=159.12  Aligned_cols=146  Identities=23%  Similarity=0.225  Sum_probs=126.0

Q ss_pred             hchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|++|.||+|.... +..+++|.+.....   .....+..|+.++..++|++++++++.+......+++||+
T Consensus         3 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   82 (316)
T cd05574           3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDY   82 (316)
T ss_pred             eEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEe
Confidence            4455789999999999998764 78899998865322   2345688899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +.+++|.+++.... ..+++.....++.|++.||.|+|+.   +++|+||||+||+++.++.++|+|||++...
T Consensus        83 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~  153 (316)
T cd05574          83 CPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQS  153 (316)
T ss_pred             cCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcc
Confidence            99999999886532 4567777888899999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.91  E-value=9.5e-24  Score=160.65  Aligned_cols=140  Identities=27%  Similarity=0.319  Sum_probs=113.4

Q ss_pred             cccCcCcCceEEEEEEc---CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEe--CCeEEEEEeccCC
Q 048219           34 EKVGRGSSGTVYKGAMI---NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE--VSKKILVYEYMSN  108 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~  108 (183)
                      ..||+|+||.||+|...   .+..+++|.+....  ....+.+|+.+++.++||||+++.+.+..  ....++++|++. 
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-   83 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-   83 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence            47999999999999854   45778999886432  12346789999999999999999998864  456889999985 


Q ss_pred             CCHHHHHhcC--------CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe----cCCCcccccceeccc
Q 048219          109 GSLADILFNA--------EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM----DENRCAKNFRLWIGK  176 (183)
Q Consensus       109 ~~l~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~----~~~~~~~i~dfg~a~  176 (183)
                      +++.+++...        ...++...+..++.|++.||.|||++   +++|+||||+||++    +..+.+||+|||+|+
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07868          84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence            5888776432        12356677788999999999999998   99999999999999    455789999999998


Q ss_pred             ccc
Q 048219          177 VDE  179 (183)
Q Consensus       177 ~~~  179 (183)
                      ...
T Consensus       161 ~~~  163 (317)
T cd07868         161 LFN  163 (317)
T ss_pred             ccC
Confidence            653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.4e-23  Score=154.17  Aligned_cols=145  Identities=25%  Similarity=0.277  Sum_probs=123.3

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-----hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-----DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      +.+.+.||+|++|.||.+... .+..+++|.+....     ......+.+|+.++++++|+|++++++++......++++
T Consensus         4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   83 (263)
T cd06625           4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFM   83 (263)
T ss_pred             ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEE
Confidence            455678999999999999865 57788988875321     112346788999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+++++++.+.+... ..+++.....++.|++.|+.+||+.   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        84 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~  154 (263)
T cd06625          84 EYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL  154 (263)
T ss_pred             EECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence            999999999888653 3456677778899999999999998   9999999999999999999999999998743

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.91  E-value=1.2e-23  Score=161.91  Aligned_cols=144  Identities=24%  Similarity=0.331  Sum_probs=120.0

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeC------CeE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEV------SKK   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~   99 (183)
                      +|.+.+.||+|+||.||+|... .+..+++|.+.....  .....+.+|+.+++.++|+||+++++++...      ...
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   95 (343)
T cd07878          16 RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEV   95 (343)
T ss_pred             hhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcE
Confidence            4666788999999999999865 577899999865422  2234577899999999999999999887533      346


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++++ ++++...+..  ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        96 ~~~~~~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~  168 (343)
T cd07878          96 YLVTNLM-GADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQA  168 (343)
T ss_pred             EEEeecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccceec
Confidence            8899987 7789887743  3577788888999999999999998   9999999999999999999999999999854

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.91  E-value=2.1e-23  Score=153.93  Aligned_cols=145  Identities=30%  Similarity=0.377  Sum_probs=124.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-----hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-----DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      +...+.||+|++|.||+|... ++..+++|.+....     .+....+.+|+.+++.++|++++++.+++......++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            344568999999999999876 67889999875432     234467889999999999999999999999889999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||+++++|.+++... ..+++.....++.|++.|+.|+|+.   +++|+||+|+||+++.++.++|+|||++...
T Consensus        82 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~  152 (258)
T cd06632          82 ELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQV  152 (258)
T ss_pred             EecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceec
Confidence            999999999988653 3466777778899999999999998   9999999999999999999999999998754

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.91  E-value=1.4e-23  Score=158.57  Aligned_cols=144  Identities=26%  Similarity=0.368  Sum_probs=126.0

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      +.+.+.||.|++|.||++... .++.+++|.+..........+.+|+.+++.++|+|++++.+.+...+..++++||+++
T Consensus        21 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  100 (296)
T cd06655          21 YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAG  100 (296)
T ss_pred             EEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCC
Confidence            555678999999999999864 5788999988654444456788899999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++..++..  ..+++..+..++.+++.++.+||+.   +++|+||+|+||+++.++.++|+|||++...
T Consensus       101 ~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~  165 (296)
T cd06655         101 GSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQI  165 (296)
T ss_pred             CcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhc
Confidence            999998854  3467788888999999999999998   9999999999999999999999999998743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.91  E-value=1.8e-23  Score=156.62  Aligned_cols=145  Identities=26%  Similarity=0.370  Sum_probs=122.1

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||+|++|.||+|... ++..+++|.+....  ......+.+|+.++..+.|+|++++.+++..++..+++|||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL   81 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence            345678999999999999875 57789999875422  112345778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCC--CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAE--KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      + +++.+++....  ..+++..+..++.|++.||.|+|+.   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        82 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  151 (285)
T cd07861          82 S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAF  151 (285)
T ss_pred             C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeec
Confidence            7 58887775432  4567778888999999999999998   9999999999999999999999999998744

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.91  E-value=2e-23  Score=154.07  Aligned_cols=144  Identities=27%  Similarity=0.434  Sum_probs=124.2

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      +.+.+.||+|+||.||++....+..+++|.+..... ....+..|+.+++.++|++++++++++......++++|+++++
T Consensus         6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   84 (256)
T cd05112           6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHG   84 (256)
T ss_pred             eEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCC
Confidence            456678999999999999877677889998764321 2345778999999999999999999998888999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +|.+.+......+.+.....++.+++.++.++|+.   +++|+|++|+||+++.++.++|+|||+++.
T Consensus        85 ~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~  149 (256)
T cd05112          85 CLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRF  149 (256)
T ss_pred             cHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceee
Confidence            99998865444567777788899999999999998   999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.91  E-value=4.1e-25  Score=161.78  Aligned_cols=149  Identities=26%  Similarity=0.310  Sum_probs=121.6

Q ss_pred             HhchhcccCcCcCceEEEEEEcC-----CcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEe-CCeEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLE-VSKKI  100 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~  100 (183)
                      .|+....||+|++|.||+|...+     .+.+|+|.++..  .........+|+.+++.++|+|++.+..++.. ...++
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~  104 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW  104 (438)
T ss_pred             HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence            35555689999999999996332     346788888643  12223567789999999999999999999877 77899


Q ss_pred             EEEeccCCCCHHHHHhcCC----CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC----Ccccccce
Q 048219          101 LVYEYMSNGSLADILFNAE----KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN----RCAKNFRL  172 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~----~~~~i~df  172 (183)
                      +++||++. +|.+.+....    +.++......|+-|++.|+.|||++   =|+||||||+||++-.+    |.+||+||
T Consensus       105 l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaDl  180 (438)
T KOG0666|consen  105 LLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIADL  180 (438)
T ss_pred             EEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeecc
Confidence            99999975 9999886432    4566677778899999999999998   89999999999999766    89999999


Q ss_pred             ecccccccc
Q 048219          173 WIGKVDEAR  181 (183)
Q Consensus       173 g~a~~~~~~  181 (183)
                      |+|++++.+
T Consensus       181 GlaR~~~~p  189 (438)
T KOG0666|consen  181 GLARLFNNP  189 (438)
T ss_pred             cHHHHhhcc
Confidence            999988653

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.91  E-value=1e-23  Score=167.24  Aligned_cols=142  Identities=22%  Similarity=0.302  Sum_probs=114.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC--------CeE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV--------SKK   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~   99 (183)
                      .|.+.+.||+|+||.||+|... .+..+|+|.+....    ....+|+.+++.++|+|++++.+++...        ..+
T Consensus        67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  142 (440)
T PTZ00036         67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL  142 (440)
T ss_pred             eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence            4666788999999999999875 57789999875432    2234689999999999999998877532        246


Q ss_pred             EEEEeccCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC-cccccceecc
Q 048219          100 ILVYEYMSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR-CAKNFRLWIG  175 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~-~~~i~dfg~a  175 (183)
                      +++|||+++ ++.+.+..   ....++......++.|++.||.|||+.   +|+||||||+||+++.++ .+||+|||+|
T Consensus       143 ~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla  218 (440)
T PTZ00036        143 NVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSA  218 (440)
T ss_pred             EEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccc
Confidence            789999975 77666542   234567778888899999999999998   999999999999999664 7999999999


Q ss_pred             ccc
Q 048219          176 KVD  178 (183)
Q Consensus       176 ~~~  178 (183)
                      +..
T Consensus       219 ~~~  221 (440)
T PTZ00036        219 KNL  221 (440)
T ss_pred             hhc
Confidence            854

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.91  E-value=1.3e-23  Score=155.37  Aligned_cols=139  Identities=26%  Similarity=0.341  Sum_probs=122.5

Q ss_pred             cCcCcCceEEEEEEcC-CcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           36 VGRGSSGTVYKGAMIN-RQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        36 lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      ||.|+||.||++.... ++.+++|.+.....   .....+.+|+.++..++|+|++++.+.+......++++|++++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            5899999999999764 88899998865432   3345688899999999999999999999989999999999999999


Q ss_pred             HHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          112 ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       112 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .+++.... .+++..+..++.|++.||.|+|+.   +++|+||+|+||+++.++.++++|||++...
T Consensus        81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~  143 (265)
T cd05579          81 ASLLENVG-SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVG  143 (265)
T ss_pred             HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhc
Confidence            99886543 567788888999999999999998   9999999999999999999999999998865

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=8e-25  Score=181.29  Aligned_cols=144  Identities=22%  Similarity=0.179  Sum_probs=126.4

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+.+.+.||+|+||-|..++.+ +++.+|.|++.++.   .....-|..|-.+|..-..+=|+.++.+|++..++|+|||
T Consensus        76 DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMd  155 (1317)
T KOG0612|consen   76 DFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMD  155 (1317)
T ss_pred             hhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEe
Confidence            4566789999999999999976 47889999998853   2234567888889987777789999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      |++||+|-.++.... .+++.+...|..++..||.-+|+.   |+||||+||+|+|+|..|++|++|||-+-
T Consensus       156 Y~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsCl  223 (1317)
T KOG0612|consen  156 YMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCL  223 (1317)
T ss_pred             cccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHH
Confidence            999999999998776 577788888999999999999998   99999999999999999999999999764

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.91  E-value=1.3e-23  Score=158.41  Aligned_cols=139  Identities=25%  Similarity=0.376  Sum_probs=122.6

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHH
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA  112 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~  112 (183)
                      ..||+|+||.||++... ++..+++|.+..........+.+|+.+++.++|+|++++.+.+...+..+++||+++++++.
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~  107 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT  107 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence            57999999999999865 57789999886554445567889999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          113 DILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       113 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +++..  ..+++.....++.|++.|+.|+|++   +++|+||+|+||+++.++.++|+|||++..
T Consensus       108 ~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~  167 (292)
T cd06658         108 DIVTH--TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQ  167 (292)
T ss_pred             HHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhh
Confidence            88743  3467778888999999999999998   999999999999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.91  E-value=3e-23  Score=153.35  Aligned_cols=144  Identities=27%  Similarity=0.363  Sum_probs=121.3

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEE-eCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL-EVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~  107 (183)
                      .+.+.+.||+|+||.||++... +..+++|......  ....+.+|+.+++.++|++++++.+++. ..+..++++|+++
T Consensus         7 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~   83 (256)
T cd05082           7 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   83 (256)
T ss_pred             hCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence            4566788999999999998654 5568888876432  2346788999999999999999998765 4567899999999


Q ss_pred             CCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+++.... ...++.....++.|++.|+.|+|++   +++|+||+|+||+++.++.++++|||+++..
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~  152 (256)
T cd05082          84 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA  152 (256)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceec
Confidence            999999886543 2366777788999999999999998   9999999999999999999999999998854

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.91  E-value=2.5e-23  Score=155.68  Aligned_cols=149  Identities=21%  Similarity=0.295  Sum_probs=125.6

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcC-----CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEe-CCeE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLE-VSKK   99 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~   99 (183)
                      ..++.+.+.||+|+||.||+|....     +..+++|.+.... ......+.+|+.+++.++|+|++++.+++.. ....
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            4556777899999999999998665     6778888876432 3345668889999999999999999998765 4678


Q ss_pred             EEEEeccCCCCHHHHHhcCC-------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccce
Q 048219          100 ILVYEYMSNGSLADILFNAE-------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL  172 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~-------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~df  172 (183)
                      ++++++++++++.+++....       ..+++.....++.|++.||.|||++   +++|+||+|+||+++.++.++++||
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~  161 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN  161 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence            89999999999999886532       3467777888999999999999998   9999999999999999999999999


Q ss_pred             eccccc
Q 048219          173 WIGKVD  178 (183)
Q Consensus       173 g~a~~~  178 (183)
                      |+++..
T Consensus       162 g~~~~~  167 (280)
T cd05043         162 ALSRDL  167 (280)
T ss_pred             CCcccc
Confidence            999843

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.91  E-value=1.2e-23  Score=158.04  Aligned_cols=145  Identities=23%  Similarity=0.338  Sum_probs=115.4

Q ss_pred             hchhcccCcCcCceEEEEEEc--CCcEEEEEEccchhh--HHHHHHHHHHHHHhhc---CCCceeeeeceEE-----eCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI--NRQLVAVNRLEKVLD--EREREFQTEIKVIGRT---HHRNLVRLLGYSL-----EVS   97 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~-----~~~   97 (183)
                      |.+.+.||+|+||.||+|...  .+..+++|.+.....  .......+|+.+++.+   .||||+++++++.     ...
T Consensus         3 Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~   82 (290)
T cd07862           3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   82 (290)
T ss_pred             cceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCC
Confidence            556678999999999999864  357788988754321  1123445566666654   6999999999875     245


Q ss_pred             eEEEEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219           98 KKILVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      ..+++||+++ +++.+++.... ..+++..+..++.|++.||.|+|+.   +++|+||||+||+++.++.++|+|||+|+
T Consensus        83 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~  158 (290)
T cd07862          83 KLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR  158 (290)
T ss_pred             cEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence            6899999996 58888886532 3467778888999999999999998   99999999999999999999999999997


Q ss_pred             cc
Q 048219          177 VD  178 (183)
Q Consensus       177 ~~  178 (183)
                      ..
T Consensus       159 ~~  160 (290)
T cd07862         159 IY  160 (290)
T ss_pred             ec
Confidence            54

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.91  E-value=1.6e-23  Score=155.49  Aligned_cols=146  Identities=32%  Similarity=0.386  Sum_probs=123.6

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---------HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---------EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   99 (183)
                      +.+...||+|++|.||+|... .+..+++|.+.....         .....+..|+.++..++|+|++++.+++...+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            345568999999999999865 467888887754211         1124578899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++|++++++|.+++... ..+++.....++.|++.|+.|+|+.   +++|+||+|+||+++.++.++|+|||.++...
T Consensus        82 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~  157 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKKLE  157 (267)
T ss_pred             EEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence            9999999999999988653 3456777778999999999999998   99999999999999999999999999987554

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.91  E-value=4.2e-23  Score=154.32  Aligned_cols=147  Identities=28%  Similarity=0.422  Sum_probs=122.7

Q ss_pred             HhchhcccCcCcCceEEEEEEcC------CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      .+.+.+.||+|++|.||+|....      +..+++|.+.... ......+..|+.+++.++|+|++++++++.+....++
T Consensus         7 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   86 (277)
T cd05036           7 SITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFI   86 (277)
T ss_pred             HcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEE
Confidence            45566789999999999998653      4567888875432 2234568889999999999999999999988888999


Q ss_pred             EEeccCCCCHHHHHhcCC------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC---cccccce
Q 048219          102 VYEYMSNGSLADILFNAE------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR---CAKNFRL  172 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~---~~~i~df  172 (183)
                      +||++++++|.+++....      ..+++..+..++.|++.|+.|||++   +++|+||+|+||+++.++   .++++||
T Consensus        87 v~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~df  163 (277)
T cd05036          87 LLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIADF  163 (277)
T ss_pred             EEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEeccC
Confidence            999999999999886532      2467778888999999999999998   999999999999998754   5899999


Q ss_pred             eccccc
Q 048219          173 WIGKVD  178 (183)
Q Consensus       173 g~a~~~  178 (183)
                      |+|+..
T Consensus       164 g~~~~~  169 (277)
T cd05036         164 GMARDI  169 (277)
T ss_pred             cccccc
Confidence            999753

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.91  E-value=9.6e-26  Score=160.34  Aligned_cols=145  Identities=20%  Similarity=0.290  Sum_probs=119.2

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccc--hhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEK--VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||+|+|+.|+++... +++.+++|++..  ......+.+.+|+++.+.++||||+++...+......|+|+|++
T Consensus        13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m   92 (355)
T KOG0033|consen   13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV   92 (355)
T ss_pred             hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecc
Confidence            456678999999999998754 466677666543  23345677889999999999999999999998999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC---CCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE---NRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~---~~~~~i~dfg~a~~~  178 (183)
                      .|++|+.-+..+ ..+.+.....++.|++.+|.|+|.+   +|+|||+||+|+++..   ..-+|++|||+|.-.
T Consensus        93 ~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l  163 (355)
T KOG0033|consen   93 TGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV  163 (355)
T ss_pred             cchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEe
Confidence            999998766543 2344556667899999999999999   9999999999999853   356999999999754

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.91  E-value=5.1e-23  Score=152.24  Aligned_cols=139  Identities=25%  Similarity=0.351  Sum_probs=117.9

Q ss_pred             ccCcCcCceEEEEEEc---CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMI---NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~---~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||+|...   .+..+++|.+....  ......+..|+.+++.+.|+|++++++++. ....+++||+++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            5899999999999643   46778999876432  233456888999999999999999998875 45678999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++.+++... ..+++.....++.|++.|+.|+|++   +++|+||+|+||+++.++.++++|||+|+..
T Consensus        81 ~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~  145 (257)
T cd05116          81 PLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL  145 (257)
T ss_pred             cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCcccccc
Confidence            999988653 3567778888999999999999998   9999999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.2e-24  Score=171.81  Aligned_cols=154  Identities=27%  Similarity=0.379  Sum_probs=132.5

Q ss_pred             CHHHHHHHHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE
Q 048219           21 SYAELKKITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        21 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   99 (183)
                      ..+++++-......+||-|.||.||.|.++. ...|++|.++.. ......|+.|+.+|+.++|||+|+++|+|..+...
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF  338 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF  338 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence            4555555555556789999999999999876 567899998754 34457899999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC-CChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQ-PNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||++|||.+|.|.+++...++. .+....++++.||..|+.||...   .++||||.++|+|+.++..+|++|||++++-
T Consensus       339 YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlM  415 (1157)
T KOG4278|consen  339 YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLM  415 (1157)
T ss_pred             EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhh
Confidence            9999999999999999876644 34445566789999999999988   9999999999999999999999999999974

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.91  E-value=1.8e-23  Score=155.69  Aligned_cols=145  Identities=24%  Similarity=0.364  Sum_probs=123.2

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh----------hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL----------DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSK   98 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   98 (183)
                      |...+.||+|+||.||+|... ++..+++|.++...          ....+.+..|+.+++.++|+|++++++++...+.
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            445678999999999999865 57789999875321          1112457789999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219           99 KILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .+++||++++++|.+.+... ..+++..+..++.|++.|+.|+|++   +++|+||+|+||+++.++.++++|||+++..
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~  158 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKKS  158 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccccccc
Confidence            99999999999999988654 3567777788899999999999998   9999999999999999999999999999753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.91  E-value=3.6e-23  Score=154.62  Aligned_cols=145  Identities=29%  Similarity=0.398  Sum_probs=124.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .+...+.||+|+||.||+|... .+..+++|.+.... ......+.+|+.+++.+.|+|++++.+.+...+..++++||+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            3445567999999999999865 46778898876432 333456889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++.+.+..  ..+.+..+..++.+++.|+.|+|++   +++|+||+|+||+++.++.++++|||+++..
T Consensus        85 ~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~  151 (277)
T cd06642          85 GGGSALDLLKP--GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQL  151 (277)
T ss_pred             CCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccc
Confidence            99999988743  3466777778899999999999998   9999999999999999999999999999754

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.91  E-value=1.9e-23  Score=157.15  Aligned_cols=144  Identities=27%  Similarity=0.316  Sum_probs=120.2

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      |.+.+.||+|+||.||+|... ++..+++|.+..... .....+.+|+.+++.++|+|++++.+++...+..++++|++.
T Consensus         7 y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~   86 (291)
T cd07870           7 YLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH   86 (291)
T ss_pred             eEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc
Confidence            456678999999999999865 577899998754321 112356789999999999999999999998899999999996


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                       +++.+.+......+.+.....++.|++.||.|+|+.   +++|+||+|+||+++.++.++|+|||+|+.
T Consensus        87 -~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~  152 (291)
T cd07870          87 -TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARA  152 (291)
T ss_pred             -CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccc
Confidence             677776654444456667777899999999999998   999999999999999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.91  E-value=2.9e-23  Score=155.48  Aligned_cols=145  Identities=24%  Similarity=0.292  Sum_probs=123.4

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||+|++|.||++... +++.+++|.+....  ......+.+|+.+++.++|+|++++.+++......+++|||+
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~   82 (286)
T cd07847           3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYC   82 (286)
T ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEecc
Confidence            455678999999999999876 47889999875432  122345778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++.+...... ...+++..+..++.|++.+|.|||+.   +++|+||+|+||+++.++.++|+|||++...
T Consensus        83 ~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  150 (286)
T cd07847          83 DHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARIL  150 (286)
T ss_pred             CccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceec
Confidence            98777766543 34577888888999999999999997   9999999999999999999999999999854

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.91  E-value=1.6e-23  Score=154.92  Aligned_cols=145  Identities=23%  Similarity=0.246  Sum_probs=126.5

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||.|+||.||++... .+..+++|.+.+..   ......+.+|+.++++++|||++++.+.+...+..++++|+
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (258)
T cd05578           2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL   81 (258)
T ss_pred             ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence            456678999999999999876 47889999886532   12346788899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +.+++|...+... ..+.+..+..++.|++.|+.|+|++   +++|+||+|+||+++.++.++++|||++...
T Consensus        82 ~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~  150 (258)
T cd05578          82 LLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKV  150 (258)
T ss_pred             CCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeeccccccc
Confidence            9999999988654 3567778888999999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.91  E-value=1.3e-23  Score=162.46  Aligned_cols=144  Identities=21%  Similarity=0.298  Sum_probs=118.8

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC------Ce
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV------SK   98 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~   98 (183)
                      .+|.+.+.||+|+||.||++... .++.+++|.+....  ......+.+|+.+++.++|+||+++++++...      ..
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   96 (355)
T cd07874          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD   96 (355)
T ss_pred             hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence            35667789999999999999865 47789999886532  23345677899999999999999999988643      24


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219           99 KILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .+++||++++ ++.+.+..   .++...+..++.|++.||.|||++   +++||||||+||+++.++.+||+|||+|+..
T Consensus        97 ~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~~~~  169 (355)
T cd07874          97 VYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_pred             eEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcccccC
Confidence            6899999965 66665532   356677777899999999999998   9999999999999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.91  E-value=5.8e-23  Score=155.79  Aligned_cols=145  Identities=28%  Similarity=0.372  Sum_probs=124.1

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch---hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV---LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||++... +++.+++|.+...   .......+.+|+.+++.++|+|++++.+++...+..++++||
T Consensus        17 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   96 (307)
T cd06607          17 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEY   96 (307)
T ss_pred             hhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHh
Confidence            566678999999999999865 5788999887532   233445688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++ +++.+.+......+.+..+..++.|++.||.|+|+.   +++|+||+|+||+++.++.++|+|||++...
T Consensus        97 ~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~  165 (307)
T cd06607          97 CL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLV  165 (307)
T ss_pred             hC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceec
Confidence            97 577776655445677888888999999999999998   9999999999999999999999999999754

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.91  E-value=3e-23  Score=154.08  Aligned_cols=144  Identities=26%  Similarity=0.381  Sum_probs=122.4

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchh------hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL------DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      ...+.||+|++|.||.+... ++..+++|.+....      ......+..|+.+++.++|+|++++++.+...+..++++
T Consensus         3 ~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~   82 (268)
T cd06630           3 LKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFV   82 (268)
T ss_pred             cccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEE
Confidence            44567999999999999864 57788998875422      123456888999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC-cccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR-CAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~-~~~i~dfg~a~~~  178 (183)
                      |++++++|.+++... ..+++.....++.|++.|+.|||+.   +++|+||+|+||+++.++ .++|+|||++...
T Consensus        83 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~  154 (268)
T cd06630          83 EWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL  154 (268)
T ss_pred             eccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence            999999999988653 3466778888999999999999998   999999999999998775 6999999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.91  E-value=2.4e-23  Score=157.69  Aligned_cols=145  Identities=26%  Similarity=0.395  Sum_probs=119.7

Q ss_pred             hchhcccCcCcCceEEEEEEcC-Cc----EEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQ----LVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~----~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      +...+.||+|+||.||++.... +.    .+++|.+.... ......+.+|+.+++.++|+|++++++.+... ..++++
T Consensus         9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~   87 (303)
T cd05110           9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVT   87 (303)
T ss_pred             ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeee
Confidence            3455689999999999998643 32    46788776432 22234678899999999999999999988654 467899


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+++++++.+.+......+++.....++.|++.||.|+|++   +++|+||||+||+++.++.+|++|||+++..
T Consensus        88 e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~  159 (303)
T cd05110          88 QLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (303)
T ss_pred             hhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccc
Confidence            99999999998876555567778888999999999999998   9999999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.91  E-value=6.2e-23  Score=151.73  Aligned_cols=140  Identities=26%  Similarity=0.374  Sum_probs=118.6

Q ss_pred             cccCcCcCceEEEEEEcC----CcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           34 EKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      +.||+|+||.||+|.+..    ...+++|.+..... .....+.+|+.+++.+.|+|++++++++. .+..+++||++++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            368999999999997542    25788998765432 34456888999999999999999998765 4567999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|.+++.... .+++..+..++.|++.++.|||+.   +++|+||+|+||+++.++.++++|||+++..
T Consensus        80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~  145 (257)
T cd05060          80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRAL  145 (257)
T ss_pred             CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEecccccccee
Confidence            99999986543 567888888999999999999998   9999999999999999999999999998743

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.91  E-value=3.5e-23  Score=156.11  Aligned_cols=146  Identities=27%  Similarity=0.365  Sum_probs=126.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ..+.+.+.||+|+||.||++... ++..+++|.+..........+.+|+.+++.++|||++++.+.+...+..++++||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            45667788999999999999864 56789999876443344466888999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++.+++..  ..+++..+..++.|++.|+.|||++   +++|+||+|+||+++.++.++|+|||++...
T Consensus        99 ~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~  165 (293)
T cd06647          99 AGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI  165 (293)
T ss_pred             CCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecc
Confidence            99999998854  3456777788999999999999998   9999999999999999999999999987643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.91  E-value=1.2e-23  Score=157.64  Aligned_cols=145  Identities=25%  Similarity=0.338  Sum_probs=123.0

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||+|+||.||+|... .+..+++|.+.....  .....+..|+.+++.++|+|++++.+++.+.+..++++||+
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC   81 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence            455678999999999999976 577889998754321  12245677999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      + +++.+.+......+++.....++.|++.||.|||+.   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        82 ~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~  149 (284)
T cd07839          82 D-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAF  149 (284)
T ss_pred             C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhcc
Confidence            6 478777765445577888888999999999999998   9999999999999999999999999999854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=5.6e-23  Score=153.31  Aligned_cols=145  Identities=28%  Similarity=0.359  Sum_probs=125.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +.+.+.||.|++|.||+|... ++..+++|.+.... ......+.+|+.+++.++|+|++++.+.+.+....++++|+++
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   82 (274)
T cd06609           3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCG   82 (274)
T ss_pred             hhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeC
Confidence            455678999999999999866 57788999876432 2334567889999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++.+.+...  .+++.....++.|++.++.++|+.   +++|+|++|+||+++.++.++++|||+++...
T Consensus        83 ~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~  149 (274)
T cd06609          83 GGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLT  149 (274)
T ss_pred             CCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeec
Confidence            99999988653  567788888999999999999998   99999999999999999999999999997653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.91  E-value=4e-23  Score=155.57  Aligned_cols=146  Identities=20%  Similarity=0.281  Sum_probs=123.3

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeC--CeEEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEV--SKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~  103 (183)
                      .+.+.+.||+|++|.||+|... .+..+++|.+.....  .....+.+|+.++..++|+|++++.+++...  +..++++
T Consensus         6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~   85 (293)
T cd07843           6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVM   85 (293)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEe
Confidence            3455678999999999999976 467888888864321  1223467899999999999999999998877  8899999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++++ ++.+++......+++.....++.|++.||.|||+.   +++|+||+|+||+++.++.++++|||+++..
T Consensus        86 e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~  156 (293)
T cd07843          86 EYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREY  156 (293)
T ss_pred             hhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeec
Confidence            99974 89888866555678888889999999999999998   9999999999999999999999999998854

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.90  E-value=2.1e-23  Score=157.63  Aligned_cols=139  Identities=23%  Similarity=0.337  Sum_probs=121.6

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHH
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA  112 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~  112 (183)
                      ..||+|+||.||++... .+..+++|.+..........+.+|+.++..+.|||++++.+.+...+..++++|+++++++.
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~  106 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT  106 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence            36999999999999865 57889999876433334456788999999999999999999999999999999999999998


Q ss_pred             HHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          113 DILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       113 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ..+..  ..+++..+..++.|++.|+.++|++   +++|+||+|+||+++.++.++|+|||+++.
T Consensus       107 ~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~  166 (297)
T cd06659         107 DIVSQ--TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQ  166 (297)
T ss_pred             HHHhh--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhh
Confidence            87744  3467778888999999999999998   999999999999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.90  E-value=1.1e-22  Score=152.09  Aligned_cols=144  Identities=27%  Similarity=0.397  Sum_probs=123.9

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +...+.||.|+||.||.|... .+..+++|.+.... ......+.+|+.+++.+.|++++++.+.+.+.+..+++||+++
T Consensus         6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06640           6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCC
Confidence            445567999999999999865 57788998876432 3344678889999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++.+.+..  ..+++.....++.|++.|+.|+|+.   +++|+||+|+||+++.++.++++|||++...
T Consensus        86 ~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~  151 (277)
T cd06640          86 GGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQL  151 (277)
T ss_pred             CCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceec
Confidence            9999998854  3466777777899999999999998   9999999999999999999999999999643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.90  E-value=5.5e-23  Score=151.76  Aligned_cols=143  Identities=31%  Similarity=0.477  Sum_probs=120.4

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      .+.+.+.||+|+||.||++.. .+..+++|.+....  ....+.+|+.+++.++|+|++++.+++.. +..+++||++++
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~~   82 (254)
T cd05083           7 KLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSK   82 (254)
T ss_pred             HceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCCC
Confidence            356677899999999999864 56678888875432  23567889999999999999999998865 457899999999


Q ss_pred             CCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++.+++.... ...+......++.|++.|+.|+|++   +++|+|++|+||+++.++.++|+|||+++..
T Consensus        83 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~  150 (254)
T cd05083          83 GNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVG  150 (254)
T ss_pred             CCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceec
Confidence            99999986543 3466777788999999999999998   9999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.90  E-value=6.2e-23  Score=152.38  Aligned_cols=145  Identities=24%  Similarity=0.256  Sum_probs=121.0

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch-----hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC--CeEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV-----LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV--SKKIL  101 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l  101 (183)
                      +.+.+.||+|+||.||.+... ++..+++|.+...     .......+.+|+.++..+.|+|++++.+++.+.  ...++
T Consensus         4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   83 (265)
T cd06652           4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSI   83 (265)
T ss_pred             ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEE
Confidence            455678999999999999865 4778999887421     122345678899999999999999999988753  46789


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +||++++++|.+++... ..+++.....++.|++.+|.|+|+.   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        84 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~  156 (265)
T cd06652          84 FMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRL  156 (265)
T ss_pred             EEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence            99999999999988654 3356677788999999999999998   9999999999999999999999999998743

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.90  E-value=4e-23  Score=153.16  Aligned_cols=145  Identities=24%  Similarity=0.364  Sum_probs=126.6

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      .+.+.||+|++|.||++... +++.+++|.+.... ......+.+|+.+++.+.|+|++++++.+...+..++++|++++
T Consensus         4 ~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (265)
T cd06605           4 EYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDG   83 (265)
T ss_pred             hHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCC
Confidence            44568999999999999876 57888999876542 33446788899999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhh-CCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHD-ECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|.+++......+++.....++.|++.++.|+|+ .   +++|+||+|+||+++.++.++++|||.+...
T Consensus        84 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~  151 (265)
T cd06605          84 GSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQL  151 (265)
T ss_pred             CcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhh
Confidence            99999987654567778888899999999999999 7   9999999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.90  E-value=3.3e-23  Score=160.65  Aligned_cols=145  Identities=20%  Similarity=0.291  Sum_probs=119.3

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC------Ce
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV------SK   98 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~   98 (183)
                      ..|.+.+.||+|+||.||++... .+..+++|.+....  ......+.+|+.+++.++|+|++++.+++...      ..
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~  103 (364)
T cd07875          24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  103 (364)
T ss_pred             cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence            34667789999999999999865 47789999886532  23345678899999999999999999887543      35


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219           99 KILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .+++|||+++ ++.+.+..   .++...+..++.|++.||.|+|++   +|+|+||||+||+++.++.++|+|||+|+..
T Consensus       104 ~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~  176 (364)
T cd07875         104 VYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  176 (364)
T ss_pred             EEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence            7999999965 67666632   356677778899999999999998   9999999999999999999999999999864


Q ss_pred             c
Q 048219          179 E  179 (183)
Q Consensus       179 ~  179 (183)
                      .
T Consensus       177 ~  177 (364)
T cd07875         177 G  177 (364)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=4.9e-23  Score=154.47  Aligned_cols=149  Identities=21%  Similarity=0.254  Sum_probs=125.7

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      ...+.+.+.||+|+||.||++... .+..+++|.+.... ......+.+|+.++..++|+|++++.+.+...+..+++||
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME   83 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence            345667788999999999999865 47778888765432 2334678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++++++.+.+... ..+++.....++.+++.++.|||+.  .+++|+|++|+||+++.++.++++|||++...
T Consensus        84 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~  154 (284)
T cd06620          84 FMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGEL  154 (284)
T ss_pred             cCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccch
Confidence            99999998887553 3467777888999999999999963  28999999999999999999999999998643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.90  E-value=7.9e-24  Score=165.62  Aligned_cols=145  Identities=26%  Similarity=0.429  Sum_probs=120.7

Q ss_pred             ceeCHHHHHHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC
Q 048219           18 FSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS   97 (183)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   97 (183)
                      +.++|+++-..     +=||.|+.|.||.|+..+ ..||+|++.....       .+|.=|++++|+||+.+.|+|....
T Consensus       119 WeiPFe~IsEL-----eWlGSGaQGAVF~Grl~n-etVAVKKV~elkE-------TdIKHLRkLkH~NII~FkGVCtqsP  185 (904)
T KOG4721|consen  119 WEIPFEEISEL-----EWLGSGAQGAVFLGRLHN-ETVAVKKVRELKE-------TDIKHLRKLKHPNIITFKGVCTQSP  185 (904)
T ss_pred             ccCCHHHhhhh-----hhhccCcccceeeeeccC-ceehhHHHhhhhh-------hhHHHHHhccCcceeeEeeeecCCc
Confidence            34455544444     349999999999997654 4688888753211       2466789999999999999998888


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219           98 KKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      -++|+||||+.|-|+..+... +..+......+..+|+.|+.|||.+   .|+|||||.-|||+..+..+||+|||-++.
T Consensus       186 cyCIiMEfCa~GqL~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e  261 (904)
T KOG4721|consen  186 CYCIIMEFCAQGQLYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKE  261 (904)
T ss_pred             eeEEeeeccccccHHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHh
Confidence            899999999999999999764 4566777888999999999999998   999999999999999999999999999886


Q ss_pred             cc
Q 048219          178 DE  179 (183)
Q Consensus       178 ~~  179 (183)
                      ..
T Consensus       262 ~~  263 (904)
T KOG4721|consen  262 LS  263 (904)
T ss_pred             hh
Confidence            64

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.90  E-value=4.1e-23  Score=155.16  Aligned_cols=146  Identities=26%  Similarity=0.436  Sum_probs=122.8

Q ss_pred             HhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      .+.+...||+|+||.||++...      .+..+++|.+..... .....+.+|+.++..+.|+|++++++++......++
T Consensus         6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~l   85 (288)
T cd05050           6 NIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCL   85 (288)
T ss_pred             hceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEE
Confidence            3556678999999999999753      356788998765432 234568889999999999999999999998889999


Q ss_pred             EEeccCCCCHHHHHhcCC---------------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEE
Q 048219          102 VYEYMSNGSLADILFNAE---------------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNIL  160 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~---------------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil  160 (183)
                      ++|++++++|.+++....                     ..+.+..+..++.|++.||.|+|++   +++|+||+|+||+
T Consensus        86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~nil  162 (288)
T cd05050          86 LFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNCL  162 (288)
T ss_pred             EEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhheE
Confidence            999999999999886321                     1245666778999999999999998   9999999999999


Q ss_pred             ecCCCcccccceecccc
Q 048219          161 MDENRCAKNFRLWIGKV  177 (183)
Q Consensus       161 ~~~~~~~~i~dfg~a~~  177 (183)
                      ++.++.++++|||+++.
T Consensus       163 ~~~~~~~~l~dfg~~~~  179 (288)
T cd05050         163 VGENMVVKIADFGLSRN  179 (288)
T ss_pred             ecCCCceEECcccccee
Confidence            99999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.90  E-value=7.2e-23  Score=151.17  Aligned_cols=146  Identities=21%  Similarity=0.201  Sum_probs=125.0

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      |.+.+.||+|+||.+|.+... +++.+++|.+...  .......+.+|+.+++.++|+|++++.+.+...+..++++|++
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC   81 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence            455678999999999999865 5778999987642  1233456888999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++.+.+.... ...++.....++.|++.|+.|+|++   +++|+||+|+||+++.++.++++|||++...
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~  151 (256)
T cd08218          82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVL  151 (256)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeec
Confidence            9999999886533 3456777788999999999999998   9999999999999999999999999999754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.90  E-value=1.2e-22  Score=150.95  Aligned_cols=145  Identities=24%  Similarity=0.277  Sum_probs=121.0

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-----hHHHHHHHHHHHHHhhcCCCceeeeeceEEe--CCeEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-----DEREREFQTEIKVIGRTHHRNLVRLLGYSLE--VSKKIL  101 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l  101 (183)
                      +...+.+|+|+||.||++... .+..+++|.+....     ......+.+|+.+++.++|+|++++.+.+..  ....++
T Consensus         4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   83 (266)
T cd06651           4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTI   83 (266)
T ss_pred             ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEE
Confidence            455678999999999999865 47788988875321     1223467889999999999999999998875  356789


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|++++++|.+.+.... .+++.....++.|++.|+.|+|+.   +++|+|++|+||+++.++.++|+|||+++..
T Consensus        84 ~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~  156 (266)
T cd06651          84 FMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL  156 (266)
T ss_pred             EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence            999999999999886533 456777778899999999999987   9999999999999999999999999998743

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.90  E-value=6.6e-23  Score=151.84  Aligned_cols=146  Identities=27%  Similarity=0.379  Sum_probs=126.2

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      |.+.+.||+|+||.+|++... ++..+++|.+.....  .....+.+|+.+++.++|++++++.+.+...+..++++||+
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC   81 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence            456678999999999999865 577889888765432  35567889999999999999999999998899999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++|.+.+... ..+.+.....++.+++.|+.|+|+.   +++|+||+|+||+++.++.++|+|||++....
T Consensus        82 ~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~  150 (264)
T cd06626          82 SGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLK  150 (264)
T ss_pred             CCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccC
Confidence            999999988653 3356677777899999999999998   99999999999999999999999999988653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.90  E-value=2.7e-23  Score=155.78  Aligned_cols=145  Identities=27%  Similarity=0.323  Sum_probs=123.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||+|+||.||+|... .++.+++|.+.....  .....+.+|+++++.++|+|++++.+++.+.+..++++||+
T Consensus         3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   82 (286)
T cd07846           3 YENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFV   82 (286)
T ss_pred             eeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecC
Confidence            445678999999999999976 478899998764321  22345778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++..+... ...+++..+..++.|++.++.|||+.   +++|+|++|+||+++.++.++++|||++...
T Consensus        83 ~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~  150 (286)
T cd07846          83 DHTVLDDLEKY-PNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL  150 (286)
T ss_pred             CccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeec
Confidence            98888776643 23467888888999999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.90  E-value=1.3e-22  Score=151.70  Aligned_cols=144  Identities=28%  Similarity=0.403  Sum_probs=123.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +.+.+.||.|+||.||++... ++..+++|...... ......+.+|+.++..++|+|++++++.+...+..+++|||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            445568999999999999864 57788998875432 2334568889999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++.+++..  ..+++.....++.+++.++.++|+.   +++|+|++|+||+++.++.++++|||+++..
T Consensus        86 ~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~  151 (277)
T cd06641          86 GGSALDLLEP--GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL  151 (277)
T ss_pred             CCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceec
Confidence            9999988854  3467777888999999999999998   9999999999999999999999999998643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.90  E-value=2.4e-22  Score=153.11  Aligned_cols=146  Identities=27%  Similarity=0.375  Sum_probs=123.9

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch---hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV---LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +...+.||+|+||.||++... ++..+++|.+...   .......+..|+.+++.++|+|++++.+++......+++|||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            455678999999999999865 5778889887532   223345688899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++ ++.+.+......+++..+..++.+++.|+.|+|++   +++|+||+|+||+++.++.++++|||++....
T Consensus       107 ~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~  176 (317)
T cd06635         107 CLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIAS  176 (317)
T ss_pred             CCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccC
Confidence            975 77777755555677888888999999999999998   99999999999999999999999999987543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.90  E-value=1.2e-22  Score=149.91  Aligned_cols=146  Identities=22%  Similarity=0.228  Sum_probs=123.3

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEe-CCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLE-VSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~  105 (183)
                      |.+.+.||.|++|.||.+... +++.+++|.+....  ......+.+|+.+++.++|++++++.+.+.. .+..++++|+
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF   81 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence            567788999999999999865 46778988875432  2334567889999999999999999888764 4468899999


Q ss_pred             cCCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++.+.+... ...+++..+..++.+++.++.++|++   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~  152 (257)
T cd08223          82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVL  152 (257)
T ss_pred             cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEe
Confidence            9999999988653 24467888888999999999999998   9999999999999999999999999999755

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.90  E-value=7.8e-23  Score=152.22  Aligned_cols=145  Identities=32%  Similarity=0.457  Sum_probs=121.4

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeC------CeEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEV------SKKIL  101 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~------~~~~l  101 (183)
                      +.+.+.||+|+||.||+|... .+..+++|.+.... .....+..|+.++..+ .|+|++++.+.+...      ...++
T Consensus         8 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i   86 (272)
T cd06637           8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL   86 (272)
T ss_pred             hhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEE
Confidence            455678999999999999865 46778888875432 2334677889999888 699999999998753      45789


Q ss_pred             EEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +|||++++++.+++.... ..+.+..+..++.|++.|+.|||++   +++|+|++|+||+++.++.++|+|||+++..
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~  161 (272)
T cd06637          87 VMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  161 (272)
T ss_pred             EEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence            999999999999887533 4567788888999999999999998   9999999999999999999999999999743

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.90  E-value=4.4e-23  Score=154.84  Aligned_cols=145  Identities=26%  Similarity=0.344  Sum_probs=115.4

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH--HHHHHHHHHHHHhhc---CCCceeeeeceEEe-----CCe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE--REREFQTEIKVIGRT---HHRNLVRLLGYSLE-----VSK   98 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~-----~~~   98 (183)
                      |.+.+.||+|+||.||+|... +++.+++|.+......  ......+|+.++..+   +|+|++++++++..     ...
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            456678999999999999876 5778999987642211  122345566666554   79999999998764     345


Q ss_pred             EEEEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219           99 KILVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      .++++|++++ ++.+++.... ..+++..+..++.|++.||.|+|+.   +++|+||||+||+++.++.++|+|||+++.
T Consensus        82 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~~  157 (288)
T cd07863          82 VTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLARI  157 (288)
T ss_pred             EEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcccc
Confidence            7899999974 8888775533 3467788888999999999999998   999999999999999999999999999986


Q ss_pred             c
Q 048219          178 D  178 (183)
Q Consensus       178 ~  178 (183)
                      .
T Consensus       158 ~  158 (288)
T cd07863         158 Y  158 (288)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.90  E-value=6.1e-23  Score=156.10  Aligned_cols=140  Identities=27%  Similarity=0.330  Sum_probs=112.9

Q ss_pred             cccCcCcCceEEEEEEc---CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEe--CCeEEEEEeccCC
Q 048219           34 EKVGRGSSGTVYKGAMI---NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE--VSKKILVYEYMSN  108 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~  108 (183)
                      ..||+|+||.||+|...   .+..+++|.+....  ....+.+|+.+++.++|+|++++.+++..  ....++++||+. 
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-   83 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-   83 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence            47999999999999865   34678888876532  12356789999999999999999998854  557889999986 


Q ss_pred             CCHHHHHhcC--------CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe----cCCCcccccceeccc
Q 048219          109 GSLADILFNA--------EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM----DENRCAKNFRLWIGK  176 (183)
Q Consensus       109 ~~l~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~----~~~~~~~i~dfg~a~  176 (183)
                      +++.+.+...        ...+++..+..++.|++.||.|+|+.   +++|+||||+||++    +..+.++|+|||+|+
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07867          84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence            4777766421        12356677778999999999999998   99999999999999    456789999999998


Q ss_pred             ccc
Q 048219          177 VDE  179 (183)
Q Consensus       177 ~~~  179 (183)
                      ...
T Consensus       161 ~~~  163 (317)
T cd07867         161 LFN  163 (317)
T ss_pred             ccC
Confidence            653

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.4e-22  Score=151.34  Aligned_cols=144  Identities=23%  Similarity=0.353  Sum_probs=123.3

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch-hhHHHHHHHHHHHHHhhcC---CCceeeeeceEEeCCeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV-LDEREREFQTEIKVIGRTH---HRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      |.+.+.||+|+||.||+|... .+..+++|.+... .......+.+|+.+++.+.   |+|++++.+++......+++||
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e   82 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME   82 (277)
T ss_pred             hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence            345568999999999999964 5788999987543 2233456778999998886   9999999999998899999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++|.+++..  ..+++.....++.|++.++.|+|+.   +++|+||+|+||+++.++.++++|||++...
T Consensus        83 ~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~  151 (277)
T cd06917          83 YAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALL  151 (277)
T ss_pred             cCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeec
Confidence            9999999998854  3567778888999999999999998   9999999999999999999999999998754

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.90  E-value=1.1e-22  Score=152.01  Aligned_cols=140  Identities=23%  Similarity=0.254  Sum_probs=119.8

Q ss_pred             cCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           36 VGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        36 lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      ||+|+||.||++... ++..+++|.+.....   .....+..|+.+++.++||+++++.+.+...+..+++|||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            689999999999865 577889988764321   1234567899999999999999999999999999999999999999


Q ss_pred             HHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          112 ADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       112 ~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .+.+.... ..+.+.....++.|++.++.|+|+.   +++|+||+|+||+++.++.++++|||++...
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~  145 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVEL  145 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhh
Confidence            98886543 3467777788899999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.90  E-value=4.6e-23  Score=173.18  Aligned_cols=152  Identities=20%  Similarity=0.289  Sum_probs=122.4

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEe--CCeEEE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLE--VSKKIL  101 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l  101 (183)
                      ...|.+.+.||+|+||.||+|.... +..+++|.+...  .......+..|+.++..++||||++++++|..  ...+++
T Consensus        12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI   91 (1021)
T PTZ00266         12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI   91 (1021)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence            3457778899999999999999764 567788876532  22334568889999999999999999998865  356899


Q ss_pred             EEeccCCCCHHHHHhcC---CCCCChHHHHHHHHHHHHHHHHhhhCCC----CCceecCCCCCCEEecCC----------
Q 048219          102 VYEYMSNGSLADILFNA---EKQPNWIERTGIARDIARGILYLHDECE----TQIIHCDIKPQNILMDEN----------  164 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~----~~i~H~dl~~~nil~~~~----------  164 (183)
                      +|||+++++|.+++...   ...+++..+..|+.||+.||.|||....    .+|+|+||||+||+++..          
T Consensus        92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~  171 (1021)
T PTZ00266         92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ  171 (1021)
T ss_pred             EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccc
Confidence            99999999999988642   2357788888999999999999998410    259999999999999642          


Q ss_pred             -------Ccccccceeccccc
Q 048219          165 -------RCAKNFRLWIGKVD  178 (183)
Q Consensus       165 -------~~~~i~dfg~a~~~  178 (183)
                             ..+||+|||+|+..
T Consensus       172 ~~n~ng~~iVKLsDFGlAr~l  192 (1021)
T PTZ00266        172 ANNLNGRPIAKIGDFGLSKNI  192 (1021)
T ss_pred             ccccCCCCceEEccCCccccc
Confidence                   34899999999854

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.90  E-value=1.5e-22  Score=149.87  Aligned_cols=146  Identities=32%  Similarity=0.397  Sum_probs=127.8

Q ss_pred             hchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +.+.+.||.|++|.+|++.... ++.+++|.+..... .....+..|+..+..++|+|++++.+.+...+..++++|+++
T Consensus         3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (264)
T cd06623           3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD   82 (264)
T ss_pred             ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC
Confidence            3455789999999999998764 88899998765433 345678899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhh-CCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHD-ECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++|.+++... ..+++.....++.|++.++.|+|+ .   +++|+|++|+||+++.++.++++|||++....
T Consensus        83 ~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~  151 (264)
T cd06623          83 GGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLE  151 (264)
T ss_pred             CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecc
Confidence            99999998654 456778888899999999999999 8   99999999999999999999999999988653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.3e-22  Score=150.63  Aligned_cols=145  Identities=26%  Similarity=0.297  Sum_probs=121.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch-----hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC--CeEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV-----LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV--SKKIL  101 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l  101 (183)
                      +.+.+.||+|+||.||++... ++..+++|.+...     .......+.+|+.+++.++|++++++.+.+.+.  +..++
T Consensus         4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   83 (264)
T cd06653           4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI   83 (264)
T ss_pred             eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence            456678999999999999865 5788999876421     123345688899999999999999999988753  46889


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|++++++|.+.+.... .+.+.....++.|++.|+.|+|+.   +++|+||+|+||+++.++.++++|||+++..
T Consensus        84 v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~  156 (264)
T cd06653          84 FVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRI  156 (264)
T ss_pred             EEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence            999999999998886533 356777788999999999999998   9999999999999999999999999999753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.90  E-value=9.2e-24  Score=150.13  Aligned_cols=150  Identities=23%  Similarity=0.216  Sum_probs=129.7

Q ss_pred             HHHhchhcccCcCcCceEEEEEE-cCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC-----CeEE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV-----SKKI  100 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~  100 (183)
                      ..+|.+.+.+|+|+|+.|+.+.. .++..+|+|++.....++.+..++|++..++++|||++++.+....+     ...|
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y   99 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY   99 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence            45788889999999999999984 46789999999877777778899999999999999999998876532     2489


Q ss_pred             EEEeccCCCCHHHHHhcC---CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          101 LVYEYMSNGSLADILFNA---EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +++.|...|++.+.+...   +...++..++.|+.+++.||.++|+. ..++.|+|+||.||++.+++.+++.|||.+..
T Consensus       100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~  178 (302)
T KOG2345|consen  100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQ  178 (302)
T ss_pred             EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccc
Confidence            999999999999988653   34678889999999999999999997 23599999999999999999999999999874

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.90  E-value=2.4e-22  Score=150.84  Aligned_cols=145  Identities=28%  Similarity=0.380  Sum_probs=127.1

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      +.+.+.+|+|++|.||++... .+..+++|.+..... ....+..|+..++.++|+|++++.+.+...+..++++|++++
T Consensus        21 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   99 (286)
T cd06614          21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDG   99 (286)
T ss_pred             chHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCC
Confidence            445568999999999999876 577889998865433 445678899999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|.+++......+++.....++.+++.|+.++|+.   +++|+|++|+||+++.++.++|+|||++...
T Consensus       100 ~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~  166 (286)
T cd06614         100 GSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQL  166 (286)
T ss_pred             CcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhh
Confidence            999999976544677888888999999999999997   9999999999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.90  E-value=2.2e-23  Score=147.76  Aligned_cols=139  Identities=12%  Similarity=0.133  Sum_probs=104.4

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchhhH--H------------------------HHHHHHHHHHHhhcCCCcee
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE--R------------------------EREFQTEIKVIGRTHHRNLV   87 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~--~------------------------~~~~~~e~~~l~~l~h~~i~   87 (183)
                      ..||+|++|.||+|...++..+++|.+......  .                        ......|+..+..+.++++.
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~   82 (190)
T cd05147           3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP   82 (190)
T ss_pred             CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            579999999999999778889999998653211  0                        11234588999998877664


Q ss_pred             eeeceEEeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHh-hhCCCCCceecCCCCCCEEecCCCc
Q 048219           88 RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL-HDECETQIIHCDIKPQNILMDENRC  166 (183)
Q Consensus        88 ~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~l-h~~~~~~i~H~dl~~~nil~~~~~~  166 (183)
                      ...... . ...+++|||++++++...... ...++......++.|++.+|.++ |+.   +++|+|+||+||+++ ++.
T Consensus        83 ~p~~~~-~-~~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~-~~~  155 (190)
T cd05147          83 CPEPIL-L-KSHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH-DGK  155 (190)
T ss_pred             CCcEEE-e-cCCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-CCc
Confidence            433222 2 233899999988766543322 23466777788999999999999 687   999999999999998 478


Q ss_pred             ccccceecccccc
Q 048219          167 AKNFRLWIGKVDE  179 (183)
Q Consensus       167 ~~i~dfg~a~~~~  179 (183)
                      ++++|||+|...+
T Consensus       156 v~LiDFG~a~~~~  168 (190)
T cd05147         156 LYIIDVSQSVEHD  168 (190)
T ss_pred             EEEEEccccccCC
Confidence            9999999998543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.90  E-value=7.2e-23  Score=155.48  Aligned_cols=145  Identities=24%  Similarity=0.312  Sum_probs=120.3

Q ss_pred             hchhcccCcCcCceEEEEEEcC---CcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC--CeEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN---RQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV--SKKIL  101 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~---~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l  101 (183)
                      +.+.+.||+|++|.||+|....   +..+++|.+....   ......+.+|+.++..++|||++++.+++.+.  ...++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            4566789999999999999654   6789999887532   22235677899999999999999999999887  78999


Q ss_pred             EEeccCCCCHHHHHhcCC----CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC----CCccccccee
Q 048219          102 VYEYMSNGSLADILFNAE----KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE----NRCAKNFRLW  173 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~----~~~~~i~dfg  173 (183)
                      +||++++ ++.+.+....    ..+++..+..++.|++.|+.|||+.   +++|+||+|+||+++.    .+.+|++|||
T Consensus        82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg  157 (316)
T cd07842          82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLG  157 (316)
T ss_pred             EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence            9999965 6766654321    2456777788999999999999998   9999999999999999    8999999999


Q ss_pred             ccccc
Q 048219          174 IGKVD  178 (183)
Q Consensus       174 ~a~~~  178 (183)
                      +++..
T Consensus       158 ~~~~~  162 (316)
T cd07842         158 LARLF  162 (316)
T ss_pred             ccccc
Confidence            98864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.90  E-value=1.1e-22  Score=152.84  Aligned_cols=145  Identities=24%  Similarity=0.208  Sum_probs=122.1

Q ss_pred             hchhcccCcCcCceEEEEEEc----CCcEEEEEEccchhh----HHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLD----EREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  100 (183)
                      +.+.+.||+|+||.||.+...    ++..+++|.+.....    .....+.+|+.++..+ +|++|+++.+.+......+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            345678999999999998853    577899998864321    2235677899999999 5899999999998888999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|+++++++.+.+... ..+.+.....++.|++.||.|+|+.   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        82 lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  155 (290)
T cd05613          82 LILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF  155 (290)
T ss_pred             EEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence            999999999999988653 3456677777888999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.90  E-value=1.6e-22  Score=152.44  Aligned_cols=140  Identities=24%  Similarity=0.352  Sum_probs=122.4

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHH
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA  112 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~  112 (183)
                      ..||+|+||.||++... ++..+++|.+..........+.+|+.+++.++|+|++++.+.+...+..+++|||++++++.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            57999999999999865 57889999876544445567889999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          113 DILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       113 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +.+..  ..+++.....++.|++.++.|+|++   +++|+|++|+||+++.++.++++|||++...
T Consensus       106 ~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~  166 (292)
T cd06657         106 DIVTH--TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV  166 (292)
T ss_pred             HHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceec
Confidence            87743  3467777888999999999999998   9999999999999999999999999988643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.90  E-value=3.4e-23  Score=152.32  Aligned_cols=140  Identities=25%  Similarity=0.365  Sum_probs=124.5

Q ss_pred             cccCcCcCceEEEEE-EcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           34 EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      +.||+|+++.|-.+. ..++..+|+|++++.......+..+|++.+...+ |+||++++++|++..+.|+|||-+.||++
T Consensus        84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl  163 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL  163 (463)
T ss_pred             HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence            469999999999887 5678999999999988888889999999998885 99999999999999999999999999999


Q ss_pred             HHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC---Ccccccceecccc
Q 048219          112 ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN---RCAKNFRLWIGKV  177 (183)
Q Consensus       112 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~---~~~~i~dfg~a~~  177 (183)
                      .+.+.+. ..+++.....+.++|+.||.|||..   +|.||||||+|||-...   .-+||+||.++.-
T Consensus       164 LshI~~~-~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg  228 (463)
T KOG0607|consen  164 LSHIQKR-KHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSG  228 (463)
T ss_pred             HHHHHHh-hhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccc
Confidence            9888654 5677888888999999999999998   99999999999996443   4589999998764

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.90  E-value=2.4e-22  Score=150.94  Aligned_cols=139  Identities=23%  Similarity=0.348  Sum_probs=121.8

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHH
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA  112 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~  112 (183)
                      +.||+|++|.||++... .+..+++|.+..........+.+|+.+++.+.|+|++++++++...+..++++|++++++|.
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~  104 (285)
T cd06648          25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALT  104 (285)
T ss_pred             eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHH
Confidence            57999999999999864 57788998876443344556788999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          113 DILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       113 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +.+..  ..++...+..++.|++.++.++|++   +++|+||+|+||+++.++.++++|||++..
T Consensus       105 ~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~  164 (285)
T cd06648         105 DIVTH--TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQ  164 (285)
T ss_pred             HHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchh
Confidence            98865  3466777788999999999999998   999999999999999999999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=2.6e-22  Score=147.69  Aligned_cols=146  Identities=25%  Similarity=0.369  Sum_probs=126.8

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||+|++|.+|++... .++.+++|.+.....  .....+.+|++++..+.|++++++.+++.+.+..++++|++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA   81 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence            455678999999999999865 467889988865432  34567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++|.+.+... ..+++.....++.|++.++.++|+.   +++|+|++|+||+++.++.++|+|||.+....
T Consensus        82 ~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~  150 (254)
T cd06627          82 ENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLN  150 (254)
T ss_pred             CCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecC
Confidence            999999988654 4567788888999999999999998   99999999999999999999999999998653

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.90  E-value=3.2e-22  Score=146.67  Aligned_cols=146  Identities=27%  Similarity=0.437  Sum_probs=128.4

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      ...+.||+|++|.+|++... ++..+++|.+..........+.+|+..++.+.|++++++.+.+......++++|+++++
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~   82 (253)
T cd05122           3 EILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGG   82 (253)
T ss_pred             eeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCC
Confidence            34567999999999999976 57789999887654445567889999999999999999999999899999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +|.+++......+++..+..++.|++.++.++|.+   +++|+|++|+||+++.++.++|+|||.+....
T Consensus        83 ~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~  149 (253)
T cd05122          83 SLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLS  149 (253)
T ss_pred             cHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccc
Confidence            99998866545677888888999999999999997   99999999999999999999999999998654

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.90  E-value=1.5e-22  Score=152.93  Aligned_cols=147  Identities=24%  Similarity=0.317  Sum_probs=122.7

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC-------
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS-------   97 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------   97 (183)
                      ..+.+.+.||+|+||.||+|... ++..+++|.+....  ......+.+|+.+++.++|||++++.+++.+..       
T Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~   86 (302)
T cd07864           7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK   86 (302)
T ss_pred             hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence            44667788999999999999976 47788898886432  122345678999999999999999999887644       


Q ss_pred             ---eEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceec
Q 048219           98 ---KKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWI  174 (183)
Q Consensus        98 ---~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~  174 (183)
                         ..++++|++++ ++...+......+++.....++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+
T Consensus        87 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~dfg~  162 (302)
T cd07864          87 DKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLADFGL  162 (302)
T ss_pred             cCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCcccc
Confidence               78999999976 77777755444577888888999999999999998   999999999999999999999999999


Q ss_pred             cccc
Q 048219          175 GKVD  178 (183)
Q Consensus       175 a~~~  178 (183)
                      +...
T Consensus       163 ~~~~  166 (302)
T cd07864         163 ARLY  166 (302)
T ss_pred             cccc
Confidence            9865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.90  E-value=2.9e-22  Score=148.56  Aligned_cols=147  Identities=25%  Similarity=0.379  Sum_probs=125.8

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +.+.+.||.|++|.||++... ++..+++|.+.... ......+.+|+..++.++|+|++++.+.+...+..++++|+++
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~   82 (267)
T cd06610           3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLS   82 (267)
T ss_pred             ceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccC
Confidence            456678999999999999865 56778888875432 2345678899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcC--CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          108 NGSLADILFNA--EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++.+.+...  ...+++.....++.|++.|+.+||+.   +++|+||+|+||++++++.++++|||++....
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~  153 (267)
T cd06610          83 GGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLA  153 (267)
T ss_pred             CCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhc
Confidence            99999988653  23567777888999999999999998   99999999999999999999999999987553

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.90  E-value=2.1e-22  Score=148.90  Aligned_cols=147  Identities=22%  Similarity=0.318  Sum_probs=122.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEe--CCeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLE--VSKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e  104 (183)
                      |.+.+.||.|+||.||++... .+..+++|.+...  .......+..|+.+++.++|+|++++++.+..  ....+++||
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e   81 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME   81 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence            345678999999999999865 5677888887532  23344568889999999999999999988764  456789999


Q ss_pred             ccCCCCHHHHHhcC---CCCCChHHHHHHHHHHHHHHHHhh-----hCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219          105 YMSNGSLADILFNA---EKQPNWIERTGIARDIARGILYLH-----DECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus       105 ~~~~~~l~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh-----~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      |+++++|.+++...   ...+++.....++.|++.|+.++|     +.   +++|+|++|+||+++.++.++++|||+++
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~~  158 (265)
T cd08217          82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLAK  158 (265)
T ss_pred             hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEecccccc
Confidence            99999999988653   345677788889999999999999     66   99999999999999999999999999998


Q ss_pred             ccc
Q 048219          177 VDE  179 (183)
Q Consensus       177 ~~~  179 (183)
                      ...
T Consensus       159 ~~~  161 (265)
T cd08217         159 ILG  161 (265)
T ss_pred             ccc
Confidence            653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.90  E-value=2.5e-22  Score=148.79  Aligned_cols=140  Identities=21%  Similarity=0.242  Sum_probs=121.5

Q ss_pred             cCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           36 VGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        36 lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      ||.|++|.||++... .+..+++|.+.+..   ......+.+|+.+++.++|+|++++.+.+.+.+..++++|++++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            689999999999976 47789999876432   22345688999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          112 ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       112 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      .+++... ..++...+..++.|++.|+.|+|++   +++|+|++|+||+++.++.++|+|||+++...
T Consensus        81 ~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~  144 (262)
T cd05572          81 WTILRDR-GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLK  144 (262)
T ss_pred             HHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccC
Confidence            9988653 3466777778899999999999998   99999999999999999999999999998653

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.90  E-value=1.7e-22  Score=151.35  Aligned_cols=145  Identities=25%  Similarity=0.361  Sum_probs=122.8

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +.+.+.||.|++|.||+|... ++..+++|.+..... .....+.+|+.+++.++|+|++++.+++.+.+..+++||+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (284)
T cd07836           2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD   81 (284)
T ss_pred             ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence            345678999999999999976 577889998764322 223456789999999999999999999999999999999997


Q ss_pred             CCCHHHHHhcCC--CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAE--KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      + ++.+++....  ..+.+..+..++.|++.|+.|+|+.   +++|+|++|+||+++.++.++++|||+++..
T Consensus        82 ~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~  150 (284)
T cd07836          82 K-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAF  150 (284)
T ss_pred             c-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhh
Confidence            5 8888775533  3467788888999999999999998   9999999999999999999999999999754

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.89  E-value=1.7e-22  Score=151.28  Aligned_cols=145  Identities=26%  Similarity=0.364  Sum_probs=124.1

Q ss_pred             chhcccCcCcCceEEEEEEcC-CcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC--CeEEEEEec
Q 048219           31 GFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV--SKKILVYEY  105 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~  105 (183)
                      .+.+.||+|++|.||+|.... +..+++|.+....  ......+..|+.+++.+.|+|++++.+++...  +..++++||
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~   81 (287)
T cd07840           2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY   81 (287)
T ss_pred             eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecc
Confidence            355789999999999998764 7788999987542  22335677899999999999999999999877  789999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++ ++.+.+......+.+.....++.|++.|+.+||+.   +++|+|++|+||+++.++.++++|||++....
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~  151 (287)
T cd07840          82 MDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYT  151 (287)
T ss_pred             ccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeecc
Confidence            975 88888865545677788888999999999999998   99999999999999999999999999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.89  E-value=1.1e-22  Score=151.18  Aligned_cols=140  Identities=30%  Similarity=0.445  Sum_probs=117.2

Q ss_pred             ccCcCcCceEEEEEEcC-------CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           35 KVGRGSSGTVYKGAMIN-------RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~-------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .||+|+||.||++....       +..+++|.+.+.. ......+.+|+.+++.++|+||+++.+++......+++||++
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            58999999999997542       2467788765432 234456888999999999999999999999888999999999


Q ss_pred             CCCCHHHHHhcCC------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC-----cccccceecc
Q 048219          107 SNGSLADILFNAE------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR-----CAKNFRLWIG  175 (183)
Q Consensus       107 ~~~~l~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~-----~~~i~dfg~a  175 (183)
                      ++++|.+++....      ..+.+..+..++.|++.|+.|+|+.   +++|+||+|+||+++.++     .++++|||++
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~  158 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA  158 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence            9999999886421      2355677778899999999999987   999999999999999877     8999999998


Q ss_pred             cc
Q 048219          176 KV  177 (183)
Q Consensus       176 ~~  177 (183)
                      +.
T Consensus       159 ~~  160 (269)
T cd05044         159 RD  160 (269)
T ss_pred             cc
Confidence            74

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.89  E-value=1.3e-22  Score=152.07  Aligned_cols=146  Identities=24%  Similarity=0.299  Sum_probs=123.3

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||+|++|.||+|... +++.+++|.+....  ......+.+|+.+++.++|+|++++.+.+...+..++++||+
T Consensus         3 y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~   82 (288)
T cd07833           3 YEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYV   82 (288)
T ss_pred             eeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecC
Confidence            456678999999999999876 46789999876432  223456888999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++.+..+... ...+++..+..++.|++.|+.|||.+   +++|+|++|+||+++.++.++|+|||++....
T Consensus        83 ~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~  151 (288)
T cd07833          83 ERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALR  151 (288)
T ss_pred             CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccC
Confidence            88666554433 34467778888999999999999998   99999999999999999999999999988653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.89  E-value=2.5e-22  Score=147.85  Aligned_cols=146  Identities=25%  Similarity=0.342  Sum_probs=127.1

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||.|++|.||++... ++..+++|.+....  ......+..|+++++.++|+|++++.+.+...+..++++|++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~   81 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA   81 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence            445678999999999999865 57788898886542  244566888999999999999999999999889999999999


Q ss_pred             CCCCHHHHHhcCC---CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAE---KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|.+.+....   ..+++.....++.+++.|+.++|+.   +++|+|++|+||+++.++.++++|||++...
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~  153 (258)
T cd08215          82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVL  153 (258)
T ss_pred             CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeec
Confidence            9999999887642   5577888888999999999999998   9999999999999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=3.5e-23  Score=163.74  Aligned_cols=141  Identities=21%  Similarity=0.235  Sum_probs=120.0

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhhH---HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      +.||-|+||.|.+++.. +..++|.|.+.+...-   .......|-++|..-.++=+|+++..|.+.+++|+||+|++||
T Consensus       635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGG  714 (1034)
T KOG0608|consen  635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG  714 (1034)
T ss_pred             eeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCc
Confidence            47999999999998854 4667888888765322   2345667888888888899999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++.+++.+-+ .+.+.....++.++..|+++.|..   |++||||||+|||+|.+|.+||.||||+.-+
T Consensus       715 DmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGf  779 (1034)
T KOG0608|consen  715 DMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  779 (1034)
T ss_pred             cHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccc
Confidence            9999997654 355666667889999999999998   9999999999999999999999999999754

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.89  E-value=2.4e-22  Score=148.24  Aligned_cols=146  Identities=24%  Similarity=0.255  Sum_probs=123.8

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      |.+.+.||+|++|.+|++... ++..+++|.+...  .......+.+|+.+++.++|+|++++.+.+...+..+++||++
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA   81 (256)
T ss_pred             ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence            455678999999999999865 5778888887543  2233467889999999999999999999998889999999999


Q ss_pred             CCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC-Ccccccceeccccc
Q 048219          107 SNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN-RCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~-~~~~i~dfg~a~~~  178 (183)
                      ++++|.+++.... ..+++..+..++.+++.++.|+|++   +++|+|++|+||+++.+ +.++++|||+++..
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~  152 (256)
T cd08220          82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKIL  152 (256)
T ss_pred             CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceec
Confidence            9999999986643 3467778888999999999999998   99999999999999865 46799999999754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.89  E-value=1.9e-22  Score=151.22  Aligned_cols=146  Identities=24%  Similarity=0.304  Sum_probs=119.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEE-----eCCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSL-----EVSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~-----~~~~~~l  101 (183)
                      .+.+.+.||+|+||.||++... .+..+++|.+.... .....+.+|+.++..+ +|+|++++++++.     ..+..++
T Consensus        19 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~l   97 (286)
T cd06638          19 TWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWL   97 (286)
T ss_pred             ceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEE
Confidence            4556678999999999999865 46778888875422 2234577889999998 6999999999874     3456899


Q ss_pred             EEeccCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +|||+++++|.+++..   ....+.+..+..++.|++.|+.|+|+.   +++|+||+|+||+++.++.++++|||+++..
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~  174 (286)
T cd06638          98 VLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGVSAQL  174 (286)
T ss_pred             EEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEccCCceeec
Confidence            9999999999987753   223456777778899999999999998   9999999999999999999999999998743

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=4.5e-23  Score=165.91  Aligned_cols=147  Identities=16%  Similarity=0.244  Sum_probs=111.6

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC--CcEEEEE--------------Eccc---hhhHHHHHHHHHHHHHhhcCCCceee
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN--RQLVAVN--------------RLEK---VLDEREREFQTEIKVIGRTHHRNLVR   88 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~ik--------------~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~   88 (183)
                      ..|.+.+.||+|+||.||+|..+.  +...+.+              .+.+   ........+.+|+.+++.++|+||++
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~  227 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK  227 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence            457777899999999999986432  1111111              0111   01112345778999999999999999


Q ss_pred             eeceEEeCCeEEEEEeccCCCCHHHHHhcCC----CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC
Q 048219           89 LLGYSLEVSKKILVYEYMSNGSLADILFNAE----KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN  164 (183)
Q Consensus        89 ~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~  164 (183)
                      +++++...+..+++++++. +++.+++....    ..........++.|++.||.|||++   +|+||||||+||+++.+
T Consensus       228 l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~~~  303 (501)
T PHA03210        228 IEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNCD  303 (501)
T ss_pred             EeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCC
Confidence            9999999999999999985 57777664321    1122344566899999999999998   99999999999999999


Q ss_pred             Ccccccceeccccc
Q 048219          165 RCAKNFRLWIGKVD  178 (183)
Q Consensus       165 ~~~~i~dfg~a~~~  178 (183)
                      +.+||+|||+|+..
T Consensus       304 ~~vkL~DFGla~~~  317 (501)
T PHA03210        304 GKIVLGDFGTAMPF  317 (501)
T ss_pred             CCEEEEeCCCceec
Confidence            99999999999754

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.89  E-value=1.4e-22  Score=153.74  Aligned_cols=146  Identities=24%  Similarity=0.334  Sum_probs=121.6

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeC--CeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEV--SKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e  104 (183)
                      +.+.+.||+|+||.||+|... ++..+++|.+.....  .....+.+|+.+++.++|+|++++.+++...  +..+++||
T Consensus         9 y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   88 (309)
T cd07845           9 FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVME   88 (309)
T ss_pred             eeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEe
Confidence            456678999999999999975 478899998753321  1123456799999999999999999998754  56899999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++. +++.+++......+++..+..++.|++.|+.|+|+.   +++|+||+|+||+++.++.++|+|||+++...
T Consensus        89 ~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845          89 YCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             cCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence            996 488888765555677888888999999999999998   99999999999999999999999999998653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.89  E-value=3.7e-22  Score=149.58  Aligned_cols=139  Identities=22%  Similarity=0.197  Sum_probs=113.1

Q ss_pred             cCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHH---hhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           36 VGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVI---GRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        36 lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l---~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      ||+|+||.||++... ++..+++|.+.+...   .......+|...+   ....|++++.+.+.+...+..+++|||+++
T Consensus         2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (279)
T cd05633           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG   81 (279)
T ss_pred             cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence            799999999999875 477899998754321   1122233444333   334789999999999988999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|.+.+... ..+++.....++.|++.|+.|+|+.   +++|+||||+||+++.++.++++|||++...
T Consensus        82 ~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~  147 (279)
T cd05633          82 GDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF  147 (279)
T ss_pred             CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence            9999888643 3477888888999999999999998   9999999999999999999999999998643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.89  E-value=1.8e-22  Score=152.86  Aligned_cols=146  Identities=24%  Similarity=0.344  Sum_probs=120.9

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC--------
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS--------   97 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------   97 (183)
                      .+.+.+.||+|+||.||+|... +++.+++|.+....  ......+.+|+.+++.++||+++++.+++....        
T Consensus        13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   92 (310)
T cd07865          13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKG   92 (310)
T ss_pred             heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCc
Confidence            3666788999999999999865 57889999875322  112234567999999999999999999886543        


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219           98 KKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ..+++||++. +++.+.+......+++..+..++.|++.|+.|||++   +++|+||+|+||+++.++.++|+|||++..
T Consensus        93 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~  168 (310)
T cd07865          93 SFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLARA  168 (310)
T ss_pred             eEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCccc
Confidence            3599999996 488887765544677888888999999999999998   999999999999999999999999999975


Q ss_pred             c
Q 048219          178 D  178 (183)
Q Consensus       178 ~  178 (183)
                      .
T Consensus       169 ~  169 (310)
T cd07865         169 F  169 (310)
T ss_pred             c
Confidence            5

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.89  E-value=2.5e-22  Score=150.26  Aligned_cols=146  Identities=22%  Similarity=0.292  Sum_probs=118.3

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHH-HhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||+|+||.||++... ++..+++|.+.... ......+..|... ++...|+|++++++++...+..+++|||+
T Consensus         3 ~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~   82 (283)
T cd06617           3 LEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVM   82 (283)
T ss_pred             ceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhh
Confidence            345678999999999999876 58889999886532 2223345556554 56678999999999999999999999999


Q ss_pred             CCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      + +++.+++..   ....+++..+..++.|++.|+.|+|++  .+++|+||+|+||+++.++.+||+|||+|+..
T Consensus        83 ~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~  154 (283)
T cd06617          83 D-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYL  154 (283)
T ss_pred             c-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence            6 578777643   224567888888999999999999974  38999999999999999999999999998753

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=3.2e-24  Score=162.71  Aligned_cols=144  Identities=31%  Similarity=0.411  Sum_probs=124.0

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH-HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE-REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      .-.+.||+|+||.||+|.+. .++.||+|.+.-.... ....+++|+.+|..++++||.++++.|.....++++|||+.|
T Consensus        16 ~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~g   95 (467)
T KOG0201|consen   16 TKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGG   95 (467)
T ss_pred             ccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcC
Confidence            33467999999999999965 5788999998654322 346788999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++.+.+.... .+.+..+.-++++++.|+.|+|.+   +.+|||+|+.||++..++.+|++|||.|-..
T Consensus        96 Gsv~~lL~~~~-~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql  161 (467)
T KOG0201|consen   96 GSVLDLLKSGN-ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQL  161 (467)
T ss_pred             cchhhhhccCC-CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeee
Confidence            99999886543 335666666889999999999998   9999999999999999999999999998754

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.89  E-value=4.7e-22  Score=149.78  Aligned_cols=145  Identities=26%  Similarity=0.344  Sum_probs=118.8

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||+|.+|.||++... +++.+++|.+.....  .....+.+|+.+++.++|+|++++.+++...+..+++|||+
T Consensus         4 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (294)
T PLN00009          4 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYL   83 (294)
T ss_pred             eEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecc
Confidence            456678999999999999875 577899998754321  22345778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC-CCcccccceeccccc
Q 048219          107 SNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE-NRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~-~~~~~i~dfg~a~~~  178 (183)
                      + +++.+.+.... ..........++.|++.||.|||++   +++|+||+|+||+++. ++.+|++|||+++..
T Consensus        84 ~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~  153 (294)
T PLN00009         84 D-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAF  153 (294)
T ss_pred             c-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence            6 47777765432 2245666677889999999999998   9999999999999985 467899999999753

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.89  E-value=3.4e-22  Score=149.41  Aligned_cols=143  Identities=21%  Similarity=0.281  Sum_probs=118.9

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcC-CCceeeeeceEEeC--CeEEEEEec
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTH-HRNLVRLLGYSLEV--SKKILVYEY  105 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~--~~~~lv~e~  105 (183)
                      .+.+.+|+|+||.||++... ++..+++|.+.... .........|+..+.++. |+|++++.+++.+.  +..++++||
T Consensus         2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~   81 (282)
T cd07831           2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL   81 (282)
T ss_pred             ceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence            45568999999999999865 57788999876532 112233456888888885 99999999999877  889999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++ +++.+.+......+++..+..++.|++.||.|+|+.   +++|+||+|+||+++. +.++|+|||+++..
T Consensus        82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~  149 (282)
T cd07831          82 MD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGI  149 (282)
T ss_pred             CC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccccc
Confidence            97 488887765445678888888999999999999998   9999999999999999 99999999999754

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.89  E-value=5.4e-22  Score=149.11  Aligned_cols=145  Identities=23%  Similarity=0.320  Sum_probs=121.0

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEe--CCeEEEEEecc
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLE--VSKKILVYEYM  106 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~  106 (183)
                      ...+.||.|++|.||++... .+..+++|.+..... .....+.+|+++++.++|+||+++++++..  .+..+++|||+
T Consensus         4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~   83 (287)
T cd06621           4 VELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYC   83 (287)
T ss_pred             EEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEec
Confidence            44568999999999999975 467888888764322 334568889999999999999999998864  44689999999


Q ss_pred             CCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|.+++..   ....++......++.|++.+|.|+|+.   +++|+|++|+||+++.++.++++|||++...
T Consensus        84 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~  155 (287)
T cd06621          84 EGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGEL  155 (287)
T ss_pred             CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence            99999887643   223456777788999999999999998   9999999999999999999999999998753

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.89  E-value=2.4e-22  Score=149.98  Aligned_cols=146  Identities=26%  Similarity=0.311  Sum_probs=126.3

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      |.+.+.||+|++|.||++... ++..+++|.+.+..   ......+..|..++..+. |+|++++++.+...+..+++||
T Consensus         3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd05581           3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLE   82 (280)
T ss_pred             ceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEc
Confidence            456678999999999999865 57889999876522   222356778899999998 9999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++++|.+.+... ..+++.....++.|++.|+.+||+.   +++|+|++|+||+++.++.++++|||++....
T Consensus        83 ~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~  153 (280)
T cd05581          83 YAPNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD  153 (280)
T ss_pred             CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence            99999999988654 3577888888999999999999998   99999999999999999999999999998653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.89  E-value=6.4e-22  Score=147.15  Aligned_cols=147  Identities=23%  Similarity=0.346  Sum_probs=119.9

Q ss_pred             hchhcccCcCcCceEEEEEEcC--CcEEEEEEccch----------hhHHHHHHHHHHHHHhh-cCCCceeeeeceEEeC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN--RQLVAVNRLEKV----------LDEREREFQTEIKVIGR-THHRNLVRLLGYSLEV   96 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~--~~~~~ik~~~~~----------~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~   96 (183)
                      +.+.+.||+|+||.||++....  +..+++|.+...          .......+..|+.++.+ ++|+|++++++.+...
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            3456789999999999998654  677888876421          12233456778887764 7899999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccccee
Q 048219           97 SKKILVYEYMSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLW  173 (183)
Q Consensus        97 ~~~~lv~e~~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg  173 (183)
                      +..+++|||++++++.+.+..   ....+++.....++.|++.++.++|+.  .+++|+|++|+||+++.++.++++|||
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~dfg  159 (269)
T cd08528          82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFG  159 (269)
T ss_pred             CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEeccc
Confidence            999999999999999887743   234567777788999999999999963  289999999999999999999999999


Q ss_pred             ccccc
Q 048219          174 IGKVD  178 (183)
Q Consensus       174 ~a~~~  178 (183)
                      ++...
T Consensus       160 ~~~~~  164 (269)
T cd08528         160 LAKQK  164 (269)
T ss_pred             ceeec
Confidence            99754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.89  E-value=6e-22  Score=145.79  Aligned_cols=145  Identities=30%  Similarity=0.388  Sum_probs=126.3

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC--CeEEEEEec
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV--SKKILVYEY  105 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~  105 (183)
                      ...+.||+|++|.+|+|... ++..+++|.+....  ......+.+|+.++++++|+|++++.+.+...  ...++++|+
T Consensus         3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~   82 (260)
T cd06606           3 TRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEY   82 (260)
T ss_pred             eeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEe
Confidence            44568999999999999976 57788888876543  23456788999999999999999999999887  889999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++++.+++.... .+++..+..++.+++.++.|+|+.   +++|+|++|+||+++.++.++|+|||.+....
T Consensus        83 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~  152 (260)
T cd06606          83 VSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLG  152 (260)
T ss_pred             cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence            99999999886644 667888888999999999999997   99999999999999999999999999988654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.89  E-value=9e-22  Score=146.58  Aligned_cols=145  Identities=24%  Similarity=0.352  Sum_probs=117.4

Q ss_pred             chhcccCcCcCceEEEEEEc----CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC------e
Q 048219           31 GFKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS------K   98 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~   98 (183)
                      .+.+.||+|+||.||+|...    .+..+++|.+....  ......+.+|+.+++.++|||++++++++....      .
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   81 (273)
T cd05074           2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI   81 (273)
T ss_pred             cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence            35568999999999999743    35789999876432  233456788999999999999999999876432      2


Q ss_pred             EEEEEeccCCCCHHHHHhcC-----CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccccee
Q 048219           99 KILVYEYMSNGSLADILFNA-----EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLW  173 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg  173 (183)
                      .++++++++++++..++...     ...++......++.|++.|+.|+|+.   +++|+||+|+||+++.++.++++|||
T Consensus        82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg  158 (273)
T cd05074          82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFG  158 (273)
T ss_pred             eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECccc
Confidence            36788999999998776432     12356677788999999999999998   99999999999999999999999999


Q ss_pred             ccccc
Q 048219          174 IGKVD  178 (183)
Q Consensus       174 ~a~~~  178 (183)
                      .++..
T Consensus       159 ~~~~~  163 (273)
T cd05074         159 LSKKI  163 (273)
T ss_pred             ccccc
Confidence            98854

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.89  E-value=9.9e-22  Score=147.12  Aligned_cols=140  Identities=22%  Similarity=0.195  Sum_probs=114.0

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHH---HHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEI---KVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~---~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .||+|+||.||++... .++.+++|.+.+...   ........|.   ..++...|++++++.+.+...+..+++|||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            3799999999999865 578899998764321   1111223333   34445679999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+.+... ..+++..+..++.|++.|+.|+|+.   +++|+|++|+||+++.++.++|+|||+++..
T Consensus        81 g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~  147 (278)
T cd05606          81 GGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF  147 (278)
T ss_pred             CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence            99998888543 4577888888999999999999998   9999999999999999999999999998744

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=8.6e-22  Score=145.78  Aligned_cols=141  Identities=21%  Similarity=0.250  Sum_probs=115.6

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHH-HhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      +.||+|++|.||+|... .++.+++|.+.+...   ........|... .....|+|++++++.+...+..++++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            46899999999999865 478899998864321   112233444443 3455899999999999998999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|.+++... ..+++..+..++.|++.||.|+|+.   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        82 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  147 (260)
T cd05611          82 GDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG  147 (260)
T ss_pred             CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence            9999988653 3466777888999999999999998   9999999999999999999999999998753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.89  E-value=2.5e-22  Score=150.47  Aligned_cols=144  Identities=22%  Similarity=0.338  Sum_probs=121.9

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      ...+.||.|++|.||+|... ++..+++|.+....  ......+.+|+++++.++|+|++++.+++.+.+..+++|||++
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   82 (284)
T cd07860           3 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH   82 (284)
T ss_pred             eeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc
Confidence            45568999999999999865 57789999875432  1223467889999999999999999999999999999999996


Q ss_pred             CCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                       +++..++... ...+++.....++.|++.|+.|+|+.   +++|+|++|+||+++.++.++++|||+++..
T Consensus        83 -~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~  150 (284)
T cd07860          83 -QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF  150 (284)
T ss_pred             -cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhc
Confidence             5888877543 24567788888999999999999998   9999999999999999999999999998743

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.89  E-value=4.4e-22  Score=149.88  Aligned_cols=145  Identities=26%  Similarity=0.347  Sum_probs=119.0

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH--HHHHHHHHHHHHhhcC-CCceeeeeceEEeCCe-----EE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE--REREFQTEIKVIGRTH-HRNLVRLLGYSLEVSK-----KI  100 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~-----~~  100 (183)
                      +.+.+.||+|+||.||+|... ++..+++|.+......  ....+.+|+.++..+. |+|++++.+++.....     .+
T Consensus         3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~   82 (295)
T cd07837           3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY   82 (295)
T ss_pred             ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence            455678999999999999976 5788999987543211  2346778999999995 6999999998876555     79


Q ss_pred             EEEeccCCCCHHHHHhcCC----CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC-CCcccccceecc
Q 048219          101 LVYEYMSNGSLADILFNAE----KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE-NRCAKNFRLWIG  175 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~-~~~~~i~dfg~a  175 (183)
                      ++|||+++ ++.+++....    ..+++..+..++.|++.||.|||++   +++|+||+|+||+++. ++.++++|||++
T Consensus        83 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~~  158 (295)
T cd07837          83 LVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLG  158 (295)
T ss_pred             EEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecccc
Confidence            99999985 7888775422    3467788888999999999999998   9999999999999998 789999999998


Q ss_pred             ccc
Q 048219          176 KVD  178 (183)
Q Consensus       176 ~~~  178 (183)
                      +..
T Consensus       159 ~~~  161 (295)
T cd07837         159 RAF  161 (295)
T ss_pred             eec
Confidence            754

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.88  E-value=1.3e-21  Score=148.61  Aligned_cols=145  Identities=26%  Similarity=0.384  Sum_probs=122.0

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch---hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV---LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +...+.||+|++|.||++... ++..+++|.+...   .......+.+|+.+++.++|+|++++.+++......++++||
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   96 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence            444567999999999999965 4677888887531   223345677899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +. +++.+.+......+++..+..++.|++.++.|+|+.   +++|+||+|+||+++.++.++++|||++...
T Consensus        97 ~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  165 (308)
T cd06634          97 CL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIM  165 (308)
T ss_pred             cC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceee
Confidence            96 578777755555577788888899999999999998   9999999999999999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.88  E-value=3.6e-23  Score=146.05  Aligned_cols=143  Identities=21%  Similarity=0.386  Sum_probs=120.0

Q ss_pred             HhchhcccCcCcCceEEEEEE-cCCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCC--eEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVS--KKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~--~~~lv~e  104 (183)
                      .+.+..++|+|.++.|+.|.. .+...+.+|.+++.   ..+.+.+|+.+|+.+. ||||+++++...++.  -..+++|
T Consensus        39 dYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE  115 (338)
T KOG0668|consen   39 DYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE  115 (338)
T ss_pred             hHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence            355667899999999999984 45677889998754   4567889999999997 999999999987754  3568999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC-Ccccccceecccccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN-RCAKNFRLWIGKVDEAR  181 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~-~~~~i~dfg~a~~~~~~  181 (183)
                      ++.+.+...+.    ..++...+..++.+++.||.|+|++   ||.|||+||.|+++|.. ..++++|||+|.|+...
T Consensus       116 ~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~  186 (338)
T KOG0668|consen  116 YVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG  186 (338)
T ss_pred             hhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence            99887776655    2466778888999999999999998   99999999999999955 78999999999998653

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.88  E-value=2.9e-23  Score=167.88  Aligned_cols=143  Identities=27%  Similarity=0.370  Sum_probs=125.6

Q ss_pred             cccCcCcCceEEEEEEc-CC----cEEEEEEccch-hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           34 EKVGRGSSGTVYKGAMI-NR----QLVAVNRLEKV-LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~----~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      ++||+|+||+||+|.+. ++    .+|++|.+... .+.....+++|+-+|..+.|||++++++++.... +-||++|+|
T Consensus       702 kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP  780 (1177)
T KOG1025|consen  702 KVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMP  780 (1177)
T ss_pred             ceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcc
Confidence            58999999999999864 33    45778776543 3445678999999999999999999999997655 778999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      .|.|.+++...+..++....+.|+.||++|+.|||.+   +++||||.++|+|+.+-..+||.|||+|++...
T Consensus       781 ~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~  850 (1177)
T KOG1025|consen  781 LGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP  850 (1177)
T ss_pred             cchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence            9999999998888888889999999999999999998   999999999999999999999999999997643

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.88  E-value=2.2e-21  Score=147.61  Aligned_cols=142  Identities=29%  Similarity=0.404  Sum_probs=120.9

Q ss_pred             hcccCcCcCceEEEEEEc-CCcEEEEEEccch---hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           33 KEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV---LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        33 ~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      .+.||+|+||.||+|... .+..+++|.+...   .......+..|+.+++.++|+|++++.+++.+....+++|||+. 
T Consensus        26 ~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-  104 (313)
T cd06633          26 LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-  104 (313)
T ss_pred             ceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-
Confidence            357999999999999865 5778888887532   22233567889999999999999999999999999999999996 


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++.+.+......+++..+..++.|++.++.|||+.   +++|+||+|+||+++.++.++++|||++...
T Consensus       105 ~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~  171 (313)
T cd06633         105 GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKS  171 (313)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCccc
Confidence            577777765555677888888999999999999998   9999999999999999999999999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=7.4e-22  Score=146.84  Aligned_cols=147  Identities=29%  Similarity=0.402  Sum_probs=123.3

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCC------eE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVS------KK   99 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~------~~   99 (183)
                      .++.+.+.||+|++|.+|+|... .+..+++|.+..... ....+.+|+.+++++ .|+|++++.+++....      ..
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL   84 (275)
T ss_pred             hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence            35667789999999999999975 467788888765432 335688899999998 6999999999997644      48


Q ss_pred             EEEEeccCCCCHHHHHhcC---CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219          100 ILVYEYMSNGSLADILFNA---EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      +++||++++++|.+++...   ...+++..+..++.|++.|+.|+|+.   +++|+||+|+||+++.++.++++|||++.
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~~  161 (275)
T cd06608          85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSA  161 (275)
T ss_pred             EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCccce
Confidence            9999999999999887542   24567777888999999999999998   99999999999999999999999999986


Q ss_pred             cc
Q 048219          177 VD  178 (183)
Q Consensus       177 ~~  178 (183)
                      ..
T Consensus       162 ~~  163 (275)
T cd06608         162 QL  163 (275)
T ss_pred             ec
Confidence            53

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.88  E-value=6.6e-22  Score=152.81  Aligned_cols=144  Identities=22%  Similarity=0.283  Sum_probs=119.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC------Ce
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV------SK   98 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~   98 (183)
                      ..+...+.||+|+||.||+|... .+..+++|.+.+.  .......+.+|+.+++.++|+|++++.+++...      ..
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   95 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD   95 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence            34666788999999999999865 5788999988643  223345677899999999999999999987643      34


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219           99 KILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .+++||++. +++.+.+...   ++......++.|++.||.|||++   +++|+||||+||+++.++.++++|||+|+..
T Consensus        96 ~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~  168 (353)
T cd07850          96 VYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  168 (353)
T ss_pred             EEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence            799999996 4787776432   66677777899999999999998   9999999999999999999999999999854

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.88  E-value=6.7e-22  Score=140.39  Aligned_cols=139  Identities=14%  Similarity=0.108  Sum_probs=105.9

Q ss_pred             hcccCcCcCceEEEEEEcCCcEEEEEEccchhhH--------------------------HHHHHHHHHHHHhhcCCCce
Q 048219           33 KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE--------------------------REREFQTEIKVIGRTHHRNL   86 (183)
Q Consensus        33 ~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~--------------------------~~~~~~~e~~~l~~l~h~~i   86 (183)
                      ...||+|++|.||+|...++..+++|.+......                          ....+..|...+.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            3579999999999998778889999987653210                          01223578889999988887


Q ss_pred             eeeeceEEeCCeEEEEEeccCCCCHHHH-HhcCCCCCChHHHHHHHHHHHHHHHHhhh-CCCCCceecCCCCCCEEecCC
Q 048219           87 VRLLGYSLEVSKKILVYEYMSNGSLADI-LFNAEKQPNWIERTGIARDIARGILYLHD-ECETQIIHCDIKPQNILMDEN  164 (183)
Q Consensus        87 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~-l~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~~i~H~dl~~~nil~~~~  164 (183)
                      .....+...  ..+++|||++++++... +..  ...+......++.|++.++.++|. .   +++|+|+||+||+++ +
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~-~  153 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH-D  153 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-C
Confidence            554443332  24899999988754332 322  234556677889999999999999 7   999999999999999 7


Q ss_pred             Ccccccceecccccc
Q 048219          165 RCAKNFRLWIGKVDE  179 (183)
Q Consensus       165 ~~~~i~dfg~a~~~~  179 (183)
                      +.++++|||+|+..+
T Consensus       154 ~~~~liDFG~a~~~~  168 (190)
T cd05145         154 GKPYIIDVSQAVELD  168 (190)
T ss_pred             CCEEEEEcccceecC
Confidence            899999999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.88  E-value=8.5e-22  Score=150.78  Aligned_cols=139  Identities=22%  Similarity=0.207  Sum_probs=117.7

Q ss_pred             cccCcC--cCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           34 EKVGRG--SSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        34 ~~lg~g--~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      ..||+|  +||.||.+.+. .++.+++|.+...  .......+.+|+.+++.++|+||+++++++...+..++++|++++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            346666  89999999875 5789999987642  223346788899999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecc
Q 048219          109 GSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIG  175 (183)
Q Consensus       109 ~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a  175 (183)
                      +++.+++.... ..+++..+..++.|++.||.|+|+.   +++|+||||+||+++.++.+++.||+.+
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~  148 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHL  148 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHH
Confidence            99999886532 3466777778999999999999997   9999999999999999999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.88  E-value=6.4e-22  Score=145.99  Aligned_cols=146  Identities=22%  Similarity=0.303  Sum_probs=123.2

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||+|+||.||++... .+..+++|.+....  ......+.+|+.+++.++|+|++++.+.+...+..++++|++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   81 (257)
T cd08225           2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC   81 (257)
T ss_pred             ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence            456678999999999999875 46788888875431  123346778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC-cccccceeccccc
Q 048219          107 SNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR-CAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~-~~~i~dfg~a~~~  178 (183)
                      +++++.+++.... ..+++.....++.|++.|+.|+|+.   +++|+|++|+||++++++ .++++|||.+...
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~  152 (257)
T cd08225          82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQL  152 (257)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhc
Confidence            9999999886533 3457778888999999999999998   999999999999999875 5699999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.88  E-value=8.2e-22  Score=149.78  Aligned_cols=135  Identities=21%  Similarity=0.184  Sum_probs=113.1

Q ss_pred             CceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHHHHHhc
Q 048219           41 SGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN  117 (183)
Q Consensus        41 ~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~  117 (183)
                      ++.+|.+... ++..+++|.+...  .......+..|+.+++.++|+||+++.+++...+..+++|||++++++.+++..
T Consensus        13 ~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~   92 (314)
T cd08216          13 LMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKT   92 (314)
T ss_pred             CceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHH
Confidence            3445555433 5788999987643  234456788999999999999999999999999999999999999999998865


Q ss_pred             C-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          118 A-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       118 ~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      . ...+.+.....++.|++.||.|||++   +|+|+||+|+||+++.++.+++.|||.+...
T Consensus        93 ~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~  151 (314)
T cd08216          93 HFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSM  151 (314)
T ss_pred             hcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceee
Confidence            3 23466777778899999999999998   9999999999999999999999999988643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.88  E-value=2.6e-22  Score=153.50  Aligned_cols=145  Identities=24%  Similarity=0.329  Sum_probs=123.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC-----eEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS-----KKIL  101 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l  101 (183)
                      +.+.+.||+|++|.||+|... .+..+++|.+....  ......+..|+.+++.++|+|++++.+++....     ..++
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l   81 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI   81 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence            456678999999999999975 47889999887543  334467888999999999999999999987764     7899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +||+++ +++.+.+.... .+++.....++.|++.|+.+||++   +++|+||+|+||+++.++.++++|||++....
T Consensus        82 v~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~  154 (330)
T cd07834          82 VTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVD  154 (330)
T ss_pred             Eecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence            999997 48888875533 567788888999999999999998   99999999999999999999999999998653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.88  E-value=4.6e-22  Score=148.68  Aligned_cols=144  Identities=22%  Similarity=0.363  Sum_probs=123.5

Q ss_pred             hhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           32 FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      +.+.||+|++|.||++... ++..+++|.+.....  .....+..|+.+++.++|++++++.+.+...+..++++|++++
T Consensus         3 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   82 (283)
T cd05118           3 KLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT   82 (283)
T ss_pred             cceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC
Confidence            4567999999999999865 577889998765432  2345677899999999999999999999999999999999975


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                       ++.+.+......+++..+..++.|++.++.|+|+.   +++|+||+|+||+++.++.++|+|||.+....
T Consensus        83 -~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~  149 (283)
T cd05118          83 -DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFG  149 (283)
T ss_pred             -CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecC
Confidence             88887766545677888888999999999999998   99999999999999999999999999987553

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.88  E-value=8.6e-22  Score=151.22  Aligned_cols=145  Identities=23%  Similarity=0.353  Sum_probs=119.7

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeC--CeEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEV--SKKIL  101 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~--~~~~l  101 (183)
                      ..+.+.+.||+|+||.||+|... .+..+++|.+...  .......+..|+.++.++ +|+|++++++++...  ...++
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l   86 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL   86 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence            34566788999999999999876 4778889987542  122334566799999999 999999999988643  46899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +||+++ +++...+...  .+.+.....++.|++.||.|||+.   +++|+||+|+||+++.++.++++|||+++..
T Consensus        87 v~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~  157 (337)
T cd07852          87 VFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSL  157 (337)
T ss_pred             Eecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence            999997 5888877543  566777777899999999999998   9999999999999999999999999999754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.88  E-value=2.5e-22  Score=153.79  Aligned_cols=142  Identities=30%  Similarity=0.453  Sum_probs=119.9

Q ss_pred             hhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhh--cCCCceeeeeceEEeCC----eEEEEEec
Q 048219           32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR--THHRNLVRLLGYSLEVS----KKILVYEY  105 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~----~~~lv~e~  105 (183)
                      +.+.+|+|.||.||+|...+ +.||+|++..   ...+.+.+|-++...  ++|+||++++++-....    .+++|++|
T Consensus       214 l~eli~~Grfg~V~KaqL~~-~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~f  289 (534)
T KOG3653|consen  214 LLELIGRGRFGCVWKAQLDN-RLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEF  289 (534)
T ss_pred             hHHHhhcCccceeehhhccC-ceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeee
Confidence            45689999999999997655 7899999853   334567777777654  58999999998876544    68999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhC------CCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE------CETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~------~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      .+.|+|.+++..  ...+|.....++..++.||.|||..      .+.+|+|||+|.+|||+..+.+..|+|||+|-.+.
T Consensus       290 h~kGsL~dyL~~--ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~  367 (534)
T KOG3653|consen  290 HPKGSLCDYLKA--NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLE  367 (534)
T ss_pred             ccCCcHHHHHHh--ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEec
Confidence            999999999976  4567888889999999999999964      35689999999999999999999999999998653

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.88  E-value=8.3e-22  Score=147.56  Aligned_cols=144  Identities=25%  Similarity=0.362  Sum_probs=122.3

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .+.+.||.|++|.||+|... ++..+++|.+....  ......+.+|+.+++.++|++++++.+++.+.+..++++|+++
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~   81 (283)
T cd07835           2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD   81 (283)
T ss_pred             chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC
Confidence            35578999999999999865 57889999875432  1122457789999999999999999999999999999999995


Q ss_pred             CCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                       +++.+++.... ..+++.....++.|++.||.|+|++   +++|+|++|+||+++.++.++++|||+++..
T Consensus        82 -~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~  149 (283)
T cd07835          82 -LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAF  149 (283)
T ss_pred             -cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccccc
Confidence             58888875543 3567888888999999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.88  E-value=3.4e-22  Score=153.31  Aligned_cols=145  Identities=19%  Similarity=0.288  Sum_probs=120.8

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEe----CCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLE----VSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~l  101 (183)
                      .+.+.+.||+|++|.||++... ++..+++|.+....  ......+..|+.+++.++|+|++++.+++..    ....++
T Consensus         6 ~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l   85 (334)
T cd07855           6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYV   85 (334)
T ss_pred             ceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEE
Confidence            4556678999999999999865 57889999886532  2234567789999999999999999988753    346899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++||+. +++.+.+... ..+++.....++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        86 v~e~~~-~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~  157 (334)
T cd07855          86 VMDLME-SDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGL  157 (334)
T ss_pred             EEehhh-hhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceee
Confidence            999995 5888877543 3477888888999999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.88  E-value=8.6e-22  Score=151.06  Aligned_cols=142  Identities=20%  Similarity=0.260  Sum_probs=119.7

Q ss_pred             hcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHH--------------HHHHHHHHHHHhhcCCCceeeeeceEEeCC
Q 048219           33 KEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDER--------------EREFQTEIKVIGRTHHRNLVRLLGYSLEVS   97 (183)
Q Consensus        33 ~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~--------------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   97 (183)
                      .+.||.|+||.||+|... .+..+++|.+.......              ...+.+|+.++..++|+|++++.+++...+
T Consensus        14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   93 (335)
T PTZ00024         14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD   93 (335)
T ss_pred             hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence            356999999999999865 57889999875432111              114678999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219           98 KKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ..+++||++. +++.+.+... ..++......++.|++.||.|||+.   +++|+||+|+||+++.++.++++|||+++.
T Consensus        94 ~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~dfg~~~~  168 (335)
T PTZ00024         94 FINLVMDIMA-SDLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADFGLARR  168 (335)
T ss_pred             cEEEEEeccc-cCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCccceee
Confidence            9999999996 5888888543 3466777888999999999999998   999999999999999999999999999975


Q ss_pred             cc
Q 048219          178 DE  179 (183)
Q Consensus       178 ~~  179 (183)
                      ..
T Consensus       169 ~~  170 (335)
T PTZ00024        169 YG  170 (335)
T ss_pred             cc
Confidence            44

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.88  E-value=8.8e-22  Score=147.36  Aligned_cols=145  Identities=24%  Similarity=0.352  Sum_probs=122.2

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh-HHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEeccC
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-EREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .+.+.||+|++|.||+|... .+..+++|.+..... .......+|+..+..+. |+|++++++.+...+..+++||++ 
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-   80 (283)
T cd07830           2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-   80 (283)
T ss_pred             eeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-
Confidence            45678999999999999976 467889998765422 12223456889999998 999999999999999999999999 


Q ss_pred             CCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          108 NGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++.+.+.... ..+++.....++.|++.++.|||++   +++|+||+|+||+++.++.++++|||+++...
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~  150 (283)
T cd07830          81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIR  150 (283)
T ss_pred             CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceecc
Confidence            778988876543 3567888888999999999999998   99999999999999999999999999997553

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.88  E-value=1e-21  Score=147.59  Aligned_cols=145  Identities=23%  Similarity=0.203  Sum_probs=121.4

Q ss_pred             hchhcccCcCcCceEEEEEEc----CCcEEEEEEccchhh----HHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLD----EREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  100 (183)
                      +.+.+.||+|++|.||++...    .+..+++|.+.+...    .....+.+|+.++.++ .|++++++.+.+......+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            345678999999999998743    456789998764321    2234577899999999 5999999999998888999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|||++++++.+.+... ..+.+.....++.|++.+|.|+|+.   +++|+|++|+||+++.++.++++|||+++..
T Consensus        82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~  155 (288)
T cd05583          82 LILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (288)
T ss_pred             EEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence            999999999999888543 3466777788899999999999997   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.88  E-value=6.5e-23  Score=156.53  Aligned_cols=142  Identities=22%  Similarity=0.237  Sum_probs=123.5

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHH---HHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      ..||+|+||.|+-+..+ +|+-+|.|.+.+.....   ....++|-.+|.+++.++||.+-.+|++.+.+++|+..|.||
T Consensus       191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGG  270 (591)
T KOG0986|consen  191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGG  270 (591)
T ss_pred             EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCC
Confidence            47999999999998865 57888888887654322   235788999999999999999999999999999999999999


Q ss_pred             CHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          110 SLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       110 ~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +|.-.+.+.+ ..+++.....++.+|+.||.+||..   +||.|||||+|||+|++|+++|+|+|+|.-.
T Consensus       271 DLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei  337 (591)
T KOG0986|consen  271 DLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEI  337 (591)
T ss_pred             ceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEec
Confidence            9977776544 4567888888999999999999998   9999999999999999999999999999754

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=4.3e-22  Score=155.13  Aligned_cols=149  Identities=19%  Similarity=0.253  Sum_probs=125.2

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccch--hhHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEE
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKV--LDEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l  101 (183)
                      +....|.+.++||.|+.+.||++...+...+++|++.-.  .......+.+|+.+|.+++ |.+|++++++-...+.+|+
T Consensus       358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm  437 (677)
T KOG0596|consen  358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM  437 (677)
T ss_pred             ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence            445567788899999999999998877777887776432  2333467899999999996 8999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |||+= ..+|-+.+.+.........+..+..|+++++.++|.+   +|||.||||.|+++- .|.+||+|||+|+..
T Consensus       438 vmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI  509 (677)
T KOG0596|consen  438 VMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAI  509 (677)
T ss_pred             Eeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhccc
Confidence            99966 5699999987765555456777899999999999998   999999999999985 477899999999865

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.88  E-value=1.7e-21  Score=146.61  Aligned_cols=145  Identities=24%  Similarity=0.350  Sum_probs=120.3

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeC-----CeEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEV-----SKKILV  102 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~-----~~~~lv  102 (183)
                      +.+.+.||+|+||.||++... +++.+++|.+.... .....+..|+.+++++ +|+|++++.+++...     +..+++
T Consensus        24 y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv  102 (291)
T cd06639          24 WEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLV  102 (291)
T ss_pred             eEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEE
Confidence            556678999999999999875 57788888876432 2234566788888888 799999999998753     357999


Q ss_pred             EeccCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |||+++++|.+++..   ....+.+.....++.|++.|+.|+|+.   +++|+||+|+||+++.++.++++|||+++..
T Consensus       103 ~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~kl~dfg~~~~~  178 (291)
T cd06639         103 LELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQL  178 (291)
T ss_pred             EEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEeecccchhc
Confidence            999999999988753   234567778888999999999999998   9999999999999999999999999998754

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.88  E-value=1.1e-21  Score=144.59  Aligned_cols=146  Identities=28%  Similarity=0.355  Sum_probs=124.3

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.+|+|++|.+|++... ++..+++|.+....  ......+..|+.+++.++|+|++++.+.+......++++|++
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA   81 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence            455678999999999999865 56788888876432  233456778999999999999999999999889999999999


Q ss_pred             CCCCHHHHHhcC---CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNA---EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++.+++...   ...+.+..+..++.+++.|+.++|+.   +++|+|++|+||+++.++.++++|||+++..
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~  153 (256)
T cd08530          82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVL  153 (256)
T ss_pred             CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhh
Confidence            999999888552   24466777788999999999999998   9999999999999999999999999999765

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.88  E-value=1.8e-21  Score=145.72  Aligned_cols=147  Identities=31%  Similarity=0.432  Sum_probs=121.0

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEe------CCeE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLE------VSKK   99 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~------~~~~   99 (183)
                      ..+.+.+.+|+|+||.||+|... .+..+++|...... .....+..|+.++.++ .|+|++++++++..      .+..
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   94 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL   94 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence            34566678999999999999875 46788888875432 2334577788888888 69999999999853      3568


Q ss_pred             EEEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|||++++++.+++.... ..+.+..+..++.|++.|+.|+|+.   +++|+|++|+||+++.++.++|+|||++...
T Consensus        95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~~~~~  171 (282)
T cd06636          95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  171 (282)
T ss_pred             EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcchhhh
Confidence            99999999999999886532 3456677777889999999999998   9999999999999999999999999998743

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.88  E-value=1.9e-22  Score=168.43  Aligned_cols=140  Identities=27%  Similarity=0.405  Sum_probs=103.9

Q ss_pred             cccCcCcCceEEEEEE-cCCcEEEEEEccch-hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE------------
Q 048219           34 EKVGRGSSGTVYKGAM-INRQLVAVNRLEKV-LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK------------   99 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~-~~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~------------   99 (183)
                      +.||+|+||.||+++- .+|..+|+|++.-. .......+.+|+.++.+++|||+++++.+|.....-            
T Consensus       485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~  564 (1351)
T KOG1035|consen  485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSE  564 (1351)
T ss_pred             HHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchh
Confidence            4799999999999985 48999999998543 233346789999999999999999998876432110            


Q ss_pred             --------------------------------------------------------------------------------
Q 048219          100 --------------------------------------------------------------------------------   99 (183)
Q Consensus       100 --------------------------------------------------------------------------------   99 (183)
                                                                                                      
T Consensus       565 ~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~  644 (1351)
T KOG1035|consen  565 SRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDD  644 (1351)
T ss_pred             hhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCc
Confidence                                                                                            


Q ss_pred             ---------------------------EEEEeccCCCCHHHHHhcCCCCC-ChHHHHHHHHHHHHHHHHhhhCCCCCcee
Q 048219          100 ---------------------------ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIH  151 (183)
Q Consensus       100 ---------------------------~lv~e~~~~~~l~~~l~~~~~~~-~~~~~~~i~~~i~~~l~~lh~~~~~~i~H  151 (183)
                                                 ||=||||+..++..++.. +... .....+.++.+|+.||.|+|++   +++|
T Consensus       645 ~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~-N~~~~~~d~~wrLFreIlEGLaYIH~~---giIH  720 (1351)
T KOG1035|consen  645 TSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR-NHFNSQRDEAWRLFREILEGLAYIHDQ---GIIH  720 (1351)
T ss_pred             chhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh-cccchhhHHHHHHHHHHHHHHHHHHhC---ceee
Confidence                                       223344433333333322 1111 1223345789999999999998   9999


Q ss_pred             cCCCCCCEEecCCCcccccceecccc
Q 048219          152 CDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       152 ~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      |||||.||++++++.+||+|||+|+.
T Consensus       721 RDLKP~NIFLd~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  721 RDLKPRNIFLDSRNSVKIGDFGLATD  746 (1351)
T ss_pred             ccCCcceeEEcCCCCeeecccccchh
Confidence            99999999999999999999999987

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.88  E-value=1.1e-21  Score=151.00  Aligned_cols=144  Identities=21%  Similarity=0.292  Sum_probs=119.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC------eE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS------KK   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~   99 (183)
                      +|.+.+.||+|+||.||++... ++..+++|.+.+..  ......+.+|+.+++.++|+||+++.+++....      ..
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   95 (343)
T cd07880          16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDF   95 (343)
T ss_pred             ceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceE
Confidence            3556678999999999999855 57889999875432  222346788999999999999999999887543      35


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|++ ++++...+..  ..+++..+..++.|++.|+.|+|+.   +++|+||+|+||+++.++.++++|||+++..
T Consensus        96 ~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~  168 (343)
T cd07880          96 YLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQT  168 (343)
T ss_pred             EEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence            8999998 6788887753  3567788888999999999999998   9999999999999999999999999999754

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>PTZ00284 protein kinase; Provisional

Probab=99.88  E-value=1.3e-21  Score=156.48  Aligned_cols=146  Identities=19%  Similarity=0.233  Sum_probs=112.1

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCC------CceeeeeceEEeC-CeE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH------RNLVRLLGYSLEV-SKK   99 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~-~~~   99 (183)
                      ..|.+.+.||+|+||.||+|... .+..+|+|.+.... ........|+.++..+.|      .+++.+.+++... .+.
T Consensus       129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~  207 (467)
T PTZ00284        129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM  207 (467)
T ss_pred             CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence            34667788999999999999865 46789999986432 222334556666665544      4588888887654 578


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC--------------
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR--------------  165 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~--------------  165 (183)
                      +++|+++ ++++.+++... ..+++..+..++.|++.||.|||++  .+|+||||||+||+++..+              
T Consensus       208 ~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~  283 (467)
T PTZ00284        208 CIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRALPPD  283 (467)
T ss_pred             EEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccccccccCCC
Confidence            8999988 67888877553 3567778888999999999999972  2899999999999998765              


Q ss_pred             --cccccceeccccc
Q 048219          166 --CAKNFRLWIGKVD  178 (183)
Q Consensus       166 --~~~i~dfg~a~~~  178 (183)
                        .+||+|||.+...
T Consensus       284 ~~~vkl~DfG~~~~~  298 (467)
T PTZ00284        284 PCRVRICDLGGCCDE  298 (467)
T ss_pred             CceEEECCCCccccC
Confidence              4899999987643

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.88  E-value=9.8e-22  Score=150.89  Aligned_cols=144  Identities=21%  Similarity=0.298  Sum_probs=119.0

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC-----CeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV-----SKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l  101 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+.... ......+..|+.+++.++|+|++++.+++...     ...++
T Consensus         6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l   85 (336)
T cd07849           6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYI   85 (336)
T ss_pred             ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEE
Confidence            4566788999999999999865 57889999886421 22334577899999999999999999887543     35789


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|++. +++...+..  ..+.+..+..++.|++.||.+||++   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        86 v~e~~~-~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~  156 (336)
T cd07849          86 VQELME-TDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIA  156 (336)
T ss_pred             Eehhcc-cCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeec
Confidence            999996 488777643  3567778888999999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.88  E-value=7.5e-22  Score=147.48  Aligned_cols=143  Identities=27%  Similarity=0.357  Sum_probs=123.5

Q ss_pred             hhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           32 FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      +.+.||+|.+|.||+|... ++..+++|.+....  ......+..|+.+++.++|++++++.+++...+..++++|+++ 
T Consensus         3 ~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-   81 (282)
T cd07829           3 KLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-   81 (282)
T ss_pred             eehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-
Confidence            4467999999999999876 47889999876542  2233567789999999999999999999998899999999997 


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++.+++......+++.....++.+++.|+.+||++   +++|+|++|+||+++.++.++|+|||+++..
T Consensus        82 ~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~  148 (282)
T cd07829          82 MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAF  148 (282)
T ss_pred             cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCccccc
Confidence            589998876544577888888999999999999998   9999999999999999999999999998865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.87  E-value=1.7e-22  Score=158.15  Aligned_cols=145  Identities=22%  Similarity=0.240  Sum_probs=120.6

Q ss_pred             hchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhh--HH------HHHHHHHHHHHhhcC---CCceeeeeceEEeCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLD--ER------EREFQTEIKVIGRTH---HRNLVRLLGYSLEVS   97 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~--~~------~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~   97 (183)
                      |...+.+|.|+||.|+.|.++. ...|.+|.+.+..-  ..      ...+..||.+|..++   |+||++++++|++.+
T Consensus       563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd  642 (772)
T KOG1152|consen  563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD  642 (772)
T ss_pred             ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC
Confidence            3344689999999999999775 67788888765321  11      123567999999986   999999999999999


Q ss_pred             eEEEEEecc-CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219           98 KKILVYEYM-SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus        98 ~~~lv~e~~-~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      ++|++||-- ++-+|++++... ..+.+.....|.+|+..|+.+||+.   +|+|||+|-+|++++.+|-+|++|||.|.
T Consensus       643 ~yyl~te~hg~gIDLFd~IE~k-p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfgsaa  718 (772)
T KOG1152|consen  643 YYYLETEVHGEGIDLFDFIEFK-PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFGSAA  718 (772)
T ss_pred             eeEEEecCCCCCcchhhhhhcc-CccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeeccchh
Confidence            999999854 466899988654 3467888888999999999999998   99999999999999999999999999986


Q ss_pred             cc
Q 048219          177 VD  178 (183)
Q Consensus       177 ~~  178 (183)
                      ..
T Consensus       719 ~~  720 (772)
T KOG1152|consen  719 YT  720 (772)
T ss_pred             hh
Confidence            43

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.87  E-value=1.3e-22  Score=147.96  Aligned_cols=139  Identities=22%  Similarity=0.278  Sum_probs=115.4

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEe----CCeEEEEEeccC
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLE----VSKKILVYEYMS  107 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~~lv~e~~~  107 (183)
                      +.||-|-.|.|..|..+ +++.+|+|.+..     .....+|+++.=.. .|+|||.+.++|..    ...+.+|||+++
T Consensus        68 qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me  142 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME  142 (400)
T ss_pred             hhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc
Confidence            57999999999999865 467788777642     23556788876554 59999999999864    335678999999


Q ss_pred             CCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC---CCcccccceeccccccc
Q 048219          108 NGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE---NRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       108 ~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~---~~~~~i~dfg~a~~~~~  180 (183)
                      ||.|++.+.+.+ ..+++....+|++||+.|+.|||+.   .|.||||||+|+|...   +..+|++|||+|+....
T Consensus       143 GGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~  216 (400)
T KOG0604|consen  143 GGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE  216 (400)
T ss_pred             chHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccccccCC
Confidence            999999997765 4588999999999999999999998   9999999999999864   46799999999997653

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.87  E-value=1.3e-21  Score=150.26  Aligned_cols=145  Identities=21%  Similarity=0.326  Sum_probs=120.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC-----CeEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV-----SKKI  100 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~  100 (183)
                      .+.+.+.||+|+||.||++... ++..+++|.+....  ......+..|+.+++.++|+|++++.+++...     ...+
T Consensus         6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~   85 (337)
T cd07858           6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY   85 (337)
T ss_pred             ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence            3556678999999999999865 57889999876431  22334567899999999999999999987644     3479


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++||+. +++.+.+... ..+++.....++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+|+..
T Consensus        86 lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~  158 (337)
T cd07858          86 IVYELMD-TDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTT  158 (337)
T ss_pred             EEEeCCC-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence            9999995 6888877543 4577788888999999999999998   9999999999999999999999999999854

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.87  E-value=3.9e-21  Score=143.16  Aligned_cols=139  Identities=22%  Similarity=0.234  Sum_probs=112.3

Q ss_pred             chhcc--cCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhh-cCCCceeeeeceEEeCCeEEEEEecc
Q 048219           31 GFKEK--VGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        31 ~~~~~--lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .+.+.  +|+|+||.||++... .+..+++|.+........     |+..... ..|+|++++++.+...+..+++|||+
T Consensus        17 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~   91 (267)
T PHA03390         17 EIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYI   91 (267)
T ss_pred             ccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcC
Confidence            34444  599999999999865 467788888754321111     2222221 26999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC-cccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR-CAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~-~~~i~dfg~a~~~  178 (183)
                      ++++|.+++.... .+++..+..++.|++.|+.|+|+.   +++|+||+|+||+++.++ .++++|||+++..
T Consensus        92 ~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~  160 (267)
T PHA03390         92 KDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKII  160 (267)
T ss_pred             CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceec
Confidence            9999999986543 678888889999999999999998   999999999999999988 9999999998754

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.87  E-value=1.9e-22  Score=160.97  Aligned_cols=144  Identities=26%  Similarity=0.330  Sum_probs=120.5

Q ss_pred             chhcccCcCcCceEEEEEEcC--C--cEEEEEEccchhhH-HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           31 GFKEKVGRGSSGTVYKGAMIN--R--QLVAVNRLEKVLDE-REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~~--~--~~~~ik~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .+.+.||+|+||.||+|.+..  +  ..||+|.+...... ....|++|+..|.+++|+|+++++|+..+ ....+|||.
T Consensus       113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL  191 (1039)
T KOG0199|consen  113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL  191 (1039)
T ss_pred             HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence            355789999999999998653  3  35788888654322 45679999999999999999999999887 677899999


Q ss_pred             cCCCCHHHHHhc-CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFN-AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++.|+|.+.+.. ....+--.....++.||+.|+.||.++   ++|||||.++|+++-....+||+|||+.+-.
T Consensus       192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaL  262 (1039)
T KOG0199|consen  192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRAL  262 (1039)
T ss_pred             cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceecc
Confidence            999999999976 223333455567899999999999998   9999999999999999999999999998843

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.87  E-value=2.3e-21  Score=146.26  Aligned_cols=146  Identities=23%  Similarity=0.325  Sum_probs=119.3

Q ss_pred             hchhcccCcCcCceEEEEEEcC-CcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||+|++|.||++.... +..+++|.+.+.. ......+..|+..+... .|+|++++++++.+....+++||++
T Consensus        17 ~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~   96 (296)
T cd06618          17 LENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELM   96 (296)
T ss_pred             heeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeecc
Confidence            4566789999999999999764 7889999986532 22344566677766666 4999999999999999999999998


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      + +++..+.......+++..+..++.|++.|+.|+|+.  .+++|+||+|+||+++.++.++|+|||++...
T Consensus        97 ~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~  165 (296)
T cd06618          97 S-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRL  165 (296)
T ss_pred             C-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence            5 477776655445677777788999999999999973  28999999999999999999999999998743

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.87  E-value=3.3e-21  Score=141.64  Aligned_cols=139  Identities=28%  Similarity=0.267  Sum_probs=120.5

Q ss_pred             cCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           36 VGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        36 lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      ||+|++|.+|.+... .+..+++|.+.+...   .....+..|+.+++.++|++++++.+.+...+..+++||++++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            689999999999865 477889988765322   1334678899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          112 ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       112 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .+.+... ..+++.....++.|++.++.++|+.   +++|+|++|+||+++.++.++++|||++...
T Consensus        81 ~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~  143 (250)
T cd05123          81 FSHLSKE-GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKEL  143 (250)
T ss_pred             HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceec
Confidence            9988654 3467778888999999999999997   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.87  E-value=1.3e-21  Score=148.22  Aligned_cols=147  Identities=27%  Similarity=0.366  Sum_probs=120.4

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH--HHHHHHHHHHHHhhcCCCceeeeeceEEeCC-------
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLLGYSLEVS-------   97 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------   97 (183)
                      ..+.+.+.||+|++|.||+|... ++..+++|.+......  ......+|+.+++.++|+|++++.+.+....       
T Consensus         8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   87 (311)
T cd07866           8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKR   87 (311)
T ss_pred             ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccC
Confidence            34667788999999999999865 4778899887543211  1234678999999999999999998875433       


Q ss_pred             -eEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219           98 -KKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus        98 -~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                       ..++++||+.+ ++...+......+++..+..++.|++.||.|+|+.   +++|+||+|+||+++.++.++++|||+++
T Consensus        88 ~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~  163 (311)
T cd07866          88 GSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLAR  163 (311)
T ss_pred             ceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCccch
Confidence             36899999864 77776655445678888888999999999999998   99999999999999999999999999998


Q ss_pred             cc
Q 048219          177 VD  178 (183)
Q Consensus       177 ~~  178 (183)
                      ..
T Consensus       164 ~~  165 (311)
T cd07866         164 PY  165 (311)
T ss_pred             hc
Confidence            54

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.87  E-value=4.1e-21  Score=143.84  Aligned_cols=144  Identities=28%  Similarity=0.393  Sum_probs=117.9

Q ss_pred             chhcccCcCcCceEEEEEEcC-CcEEEEEEccchhh--HHHHHHHHHHHHHhhc---CCCceeeeeceEEeCCe-----E
Q 048219           31 GFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLD--EREREFQTEIKVIGRT---HHRNLVRLLGYSLEVSK-----K   99 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~~~-----~   99 (183)
                      .+.+.||+|+||.||++.... +..+++|.+.....  .....+.+|+.++..+   .|+|++++.+.+.....     .
T Consensus         2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~   81 (287)
T cd07838           2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKL   81 (287)
T ss_pred             eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCcee
Confidence            355689999999999999764 78899998864321  1223455677766655   69999999999987766     8


Q ss_pred             EEEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++||++++ ++.+++.... ..+++..+..++.|++.||.|||+.   +++|+|++|+||+++.++.++++|||++...
T Consensus        82 ~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~~  157 (287)
T cd07838          82 TLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARIY  157 (287)
T ss_pred             EEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcceec
Confidence            999999974 7888776533 3567888888999999999999998   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.87  E-value=3.3e-21  Score=148.55  Aligned_cols=144  Identities=23%  Similarity=0.300  Sum_probs=118.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC------CeE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV------SKK   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~   99 (183)
                      ++.+.+.||+|+||.||++... ++..+++|.+.+..  ......+.+|+.++..++|+||+++.+++...      +..
T Consensus        18 ~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   97 (345)
T cd07877          18 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV   97 (345)
T ss_pred             ceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccE
Confidence            3455678999999999999864 57889999886532  22245677899999999999999999887543      346


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++++ ++++.+.+..  ..+++..+..++.|++.|+.|+|+.   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        98 ~lv~~~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~  170 (345)
T cd07877          98 YLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT  170 (345)
T ss_pred             EEEehhc-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEecccccccc
Confidence            7888876 7789887743  3467778888999999999999998   9999999999999999999999999998753

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.87  E-value=1.5e-21  Score=144.50  Aligned_cols=145  Identities=19%  Similarity=0.249  Sum_probs=116.5

Q ss_pred             hchhcccCcCcCceEEEEEEcC-CcEEEEEEccch-----hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKV-----LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      |.+.+.||+|+||.||++.... +...+++.++..     .......+..|+.+++.++|||++++++.+.+....++++
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence            5667889999999999998654 333334443321     1222345667889999999999999999999888999999


Q ss_pred             eccCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||++++++...+..   ....+++.....++.|++.|+.|+|+.   +++|+|++|+||+++. +.++++|||+++..
T Consensus        82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~  155 (260)
T cd08222          82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLL  155 (260)
T ss_pred             EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeec
Confidence            99999999987753   224567778888999999999999998   9999999999999975 56999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.87  E-value=1.8e-21  Score=149.83  Aligned_cols=144  Identities=23%  Similarity=0.308  Sum_probs=119.0

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC-----------
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV-----------   96 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----------   96 (183)
                      ++.+.+.||.|+||.||+|... ++..+++|.+..........+.+|+.+++.++|+|++++++.+...           
T Consensus         6 ~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   85 (342)
T cd07854           6 RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSL   85 (342)
T ss_pred             ceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccc
Confidence            4566678999999999999865 5788999987654444556788899999999999999998776543           


Q ss_pred             ---CeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC-CCcccccce
Q 048219           97 ---SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE-NRCAKNFRL  172 (183)
Q Consensus        97 ---~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~-~~~~~i~df  172 (183)
                         ...++++||++ +++.+.+..  ..+++.....++.|++.|+.|||+.   +++|+||+|+||+++. ++.++++||
T Consensus        86 ~~~~~~~lv~e~~~-~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~df  159 (342)
T cd07854          86 TELNSVYIVQEYME-TDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDF  159 (342)
T ss_pred             cccceEEEEeeccc-ccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECCc
Confidence               35789999997 588887753  3466778888999999999999998   9999999999999985 467899999


Q ss_pred             eccccc
Q 048219          173 WIGKVD  178 (183)
Q Consensus       173 g~a~~~  178 (183)
                      |+++..
T Consensus       160 g~~~~~  165 (342)
T cd07854         160 GLARIV  165 (342)
T ss_pred             ccceec
Confidence            999753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PRK10345 hypothetical protein; Provisional

Probab=99.87  E-value=3.1e-21  Score=138.27  Aligned_cols=135  Identities=16%  Similarity=0.198  Sum_probs=101.1

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhc-----CCCceeeeeceEEeCC---eEE-EEEe
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRT-----HHRNLVRLLGYSLEVS---KKI-LVYE  104 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~---~~~-lv~e  104 (183)
                      +.||+|++|.||.  .......++|.+..........+.+|+.+++.+     .||||+++++++++..   ..+ +++|
T Consensus         8 ~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e   85 (210)
T PRK10345          8 SPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD   85 (210)
T ss_pred             ceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence            4799999999995  433222357776543233445689999999999     5799999999998763   334 7899


Q ss_pred             c--cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHH-HHhhhCCCCCceecCCCCCCEEecCC----Ccccccc-eeccc
Q 048219          105 Y--MSNGSLADILFNAEKQPNWIERTGIARDIARGI-LYLHDECETQIIHCDIKPQNILMDEN----RCAKNFR-LWIGK  176 (183)
Q Consensus       105 ~--~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l-~~lh~~~~~~i~H~dl~~~nil~~~~----~~~~i~d-fg~a~  176 (183)
                      +  +++++|.+++.+.  .+.+.  ..++.+++.++ .|||++   +|+||||||+||+++..    ..++|+| ||.+.
T Consensus        86 ~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~  158 (210)
T PRK10345         86 FDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNIGEST  158 (210)
T ss_pred             CCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECCCCcc
Confidence            9  5578999999653  23333  34567878777 899998   99999999999999743    3799999 66555


Q ss_pred             c
Q 048219          177 V  177 (183)
Q Consensus       177 ~  177 (183)
                      +
T Consensus       159 ~  159 (210)
T PRK10345        159 F  159 (210)
T ss_pred             e
Confidence            4

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=1.8e-23  Score=149.46  Aligned_cols=144  Identities=23%  Similarity=0.373  Sum_probs=117.2

Q ss_pred             cccCcCcCceEEEEEEcC-CcEEEEEEcc--chhhHHHHHHHHHHHHHhhcCCCceeeeeceEEe--------CCeEEEE
Q 048219           34 EKVGRGSSGTVYKGAMIN-RQLVAVNRLE--KVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE--------VSKKILV  102 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~-~~~~~ik~~~--~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------~~~~~lv  102 (183)
                      .++|+|.||.|++|+.++ ++.|++|++-  ..........++|+.+|..++|+|++.+.+.|..        ...+|+|
T Consensus        23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylV  102 (376)
T KOG0669|consen   23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLV  102 (376)
T ss_pred             HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeee
Confidence            479999999999998654 5666765531  1101112346789999999999999988887753        1237999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEAR  181 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~~  181 (183)
                      +.+|+. +|.-++.+....+....+..++.++..||.|+|.+   .|+|||+|++|++++.++.++|+|||+|+.+.++
T Consensus       103 f~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar~fs~~  177 (376)
T KOG0669|consen  103 FDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLARAFSTS  177 (376)
T ss_pred             HHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccccceecc
Confidence            999964 99999987766788889999999999999999998   9999999999999999999999999999887654

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.86  E-value=7.2e-21  Score=145.77  Aligned_cols=144  Identities=23%  Similarity=0.303  Sum_probs=119.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEe-CCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLE-VSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e  104 (183)
                      .|.+.+.||.|+||.||++... .+..+++|.+.+..  ......+..|+.++..++|||++++.+++.. ....++++|
T Consensus        11 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e   90 (328)
T cd07856          11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTE   90 (328)
T ss_pred             ceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEee
Confidence            3556678999999999999865 67889999875422  2234567789999999999999999998875 457889999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++ ++++...+..  ..+.......++.|++.||.|+|+.   +++|+|++|+||+++.++.++++|||++...
T Consensus        91 ~~-~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~  158 (328)
T cd07856          91 LL-GTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQ  158 (328)
T ss_pred             hh-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence            98 5688887753  2355666677899999999999998   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.86  E-value=1.1e-20  Score=141.99  Aligned_cols=143  Identities=25%  Similarity=0.326  Sum_probs=116.2

Q ss_pred             hhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEeccCC
Q 048219           32 FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      ..+.||+|+||.||++... ++..+++|.+.... ......+..|+.++.++. |+|++++++++...+..+++||++..
T Consensus         8 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~   87 (288)
T cd06616           8 DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI   87 (288)
T ss_pred             HHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC
Confidence            3457999999999999865 47889999876432 233456788999998886 99999999999988899999999854


Q ss_pred             CCHHHHHh---c-CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          109 GSLADILF---N-AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       109 ~~l~~~l~---~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                       ++.++..   . ....+++.....++.+++.|+.|+|+.  .+++|+||+|+||+++.++.++|+|||+|+.
T Consensus        88 -~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~  157 (288)
T cd06616          88 -SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQ  157 (288)
T ss_pred             -CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHH
Confidence             5544332   1 224577788888999999999999963  2899999999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.86  E-value=1.1e-22  Score=170.74  Aligned_cols=141  Identities=29%  Similarity=0.413  Sum_probs=118.3

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      ..||.|.||.||.|... +|...|+|-++-..  ......+.+|..++..++|||+++++|+-......+|+||||.+|+
T Consensus      1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~Gs 1320 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGS 1320 (1509)
T ss_pred             cccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCc
Confidence            47999999999999854 56777777664322  2223457899999999999999999999888899999999999999


Q ss_pred             HHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       111 l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |.+.+.. ++..++....-+..|++.|+.|||.+   +|||||+||+||+++.+|.+|..|||.|.-.
T Consensus      1321 La~ll~~-gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1321 LASLLEH-GRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred             HHHHHHh-cchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEe
Confidence            9998854 33445555555789999999999998   9999999999999999999999999999854

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.86  E-value=7e-21  Score=145.95  Aligned_cols=144  Identities=19%  Similarity=0.306  Sum_probs=116.3

Q ss_pred             hchhcccCcCcCceEEEEEEc-C--CcEEEEEEccchh--hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeC----CeE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-N--RQLVAVNRLEKVL--DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEV----SKK   99 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~--~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~----~~~   99 (183)
                      +.+.+.||+|+||.||++... .  +..+++|.+....  ......+..|+.++..+ .|+|++++.+.+...    ...
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~   81 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL   81 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence            456678999999999999865 3  6778999876421  22345677899999988 599999998875432    356


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++++. ++|.+.+.. ...+++.....++.|++.||.|+|+.   +++|+||+|+||+++.++.++|+|||+|+..
T Consensus        82 ~~~~e~~~-~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~~  155 (332)
T cd07857          82 YLYEELME-ADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGF  155 (332)
T ss_pred             EEEEeccc-CCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence            78889885 688887754 34567788888999999999999998   9999999999999999999999999999743

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=9.4e-23  Score=147.46  Aligned_cols=142  Identities=24%  Similarity=0.354  Sum_probs=113.3

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCC-----eEEEEEec
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVS-----KKILVYEY  105 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~  105 (183)
                      .-||-|+||.||...+. +++.+++|++-+..+  ...+++.+|+..|..++|.|++...+....+.     .+|.++|.
T Consensus        59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL  138 (449)
T KOG0664|consen   59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL  138 (449)
T ss_pred             CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence            36999999999988865 588899888765432  23467888999999999999999888765433     24667787


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      +. .+|...+... ..++..-+.-+..||+.||.|||+.   +|.|||+||.|.+++.++.+||+|||+|++++.
T Consensus       139 mQ-SDLHKIIVSP-Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~  208 (449)
T KOG0664|consen  139 MQ-SDLHKIIVSP-QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQ  208 (449)
T ss_pred             HH-hhhhheeccC-CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccch
Confidence            75 4777766543 3444445555789999999999998   999999999999999999999999999998864

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.85  E-value=2.9e-21  Score=139.54  Aligned_cols=142  Identities=22%  Similarity=0.355  Sum_probs=114.2

Q ss_pred             cccCcCcCceEEEEEEcC-CcEEEEEEccch-hhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           34 EKVGRGSSGTVYKGAMIN-RQLVAVNRLEKV-LDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      .-||.|+-|.||+++.+. +...|+|++.+. ..+..++++..++++..- ..|.||+.+|+|......++-||.+. ..
T Consensus        98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~C  176 (391)
T KOG0983|consen   98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-TC  176 (391)
T ss_pred             HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-HH
Confidence            358999999999999764 788999998764 345567777777766554 48999999999999999999999884 35


Q ss_pred             HHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       111 l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +..++..-....++.-.-.+..-+..||.||...  ++|+|||+||+|||+|+.|++|+||||++...
T Consensus       177 ~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrl  242 (391)
T KOG0983|consen  177 AEKLLKRIKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRL  242 (391)
T ss_pred             HHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeeccccccee
Confidence            6666655445555554445667788999999875  49999999999999999999999999999754

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=3e-21  Score=147.73  Aligned_cols=154  Identities=26%  Similarity=0.297  Sum_probs=124.6

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcC-CcEEEEEEc--cc-hhhHH----HHHHHHHHHHHhhcCCCceeeeeceEE-eCC
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRL--EK-VLDER----EREFQTEIKVIGRTHHRNLVRLLGYSL-EVS   97 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~--~~-~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~   97 (183)
                      ..+|-+...||+|+|+.||+|.+.. ..-+|+|+-  .+ +..+.    .+...+|.++.+.+.||.||+++++|- +.+
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd  541 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD  541 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence            3456666789999999999999765 556677762  22 22211    245788999999999999999999984 677


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC---CCcccccceec
Q 048219           98 KKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE---NRCAKNFRLWI  174 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~---~~~~~i~dfg~  174 (183)
                      ..|-|+|||+|.+|..++... +...+.....|+-||+.||.||... ..+|+|-||||.|||+-.   -|.+||.|||+
T Consensus       542 sFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGL  619 (775)
T KOG1151|consen  542 SFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGL  619 (775)
T ss_pred             cceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecch
Confidence            889999999999999999764 4567788888999999999999985 469999999999999854   37899999999


Q ss_pred             cccccccc
Q 048219          175 GKVDEARS  182 (183)
Q Consensus       175 a~~~~~~~  182 (183)
                      +++-+.-|
T Consensus       620 SKIMdddS  627 (775)
T KOG1151|consen  620 SKIMDDDS  627 (775)
T ss_pred             hhhccCCc
Confidence            99876543

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=2.3e-22  Score=152.54  Aligned_cols=150  Identities=25%  Similarity=0.276  Sum_probs=123.3

Q ss_pred             HHHHHHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchh---hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCe
Q 048219           24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVL---DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSK   98 (183)
Q Consensus        24 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   98 (183)
                      -++.-..++...||.|+||.|.+|..+. ..++|+|++++.-   ..+..-...|-++|... +.|.++++..+|++.++
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR  424 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR  424 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence            3455557788899999999999998664 5778999987642   12233456677777766 46789999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219           99 KILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +|+||||+.||+|.-.+.+.++ +-++....++.+|+.||-+||+.   +|+.||||.+|+++|.+|.+||.|||+++.
T Consensus       425 LyFVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKE  499 (683)
T KOG0696|consen  425 LYFVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE  499 (683)
T ss_pred             eeeEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccc
Confidence            9999999999999766655543 44556677899999999999998   999999999999999999999999999984

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.85  E-value=7.7e-21  Score=132.31  Aligned_cols=143  Identities=23%  Similarity=0.305  Sum_probs=115.7

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhh-cCCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGR-THHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      ..||+|++|.|-+-+.. ++...|+|.+.-.. ....++++.|+.+..+ ...|.++.++|.+......++.||.+. .|
T Consensus        52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~-tS  130 (282)
T KOG0984|consen   52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD-TS  130 (282)
T ss_pred             hhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-hh
Confidence            46999999998877754 68888999886432 2334567778886654 469999999999999999999999995 57


Q ss_pred             HHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          111 LADILFN---AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       111 l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +..+...   .+...++.-+-.|+..+..||.|||++  ..++|||+||+|||++.+|.+|+||||++....
T Consensus       131 ldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~  200 (282)
T KOG0984|consen  131 LDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLV  200 (282)
T ss_pred             HHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence            7765543   344566776677888999999999986  699999999999999999999999999987553

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.85  E-value=7.9e-21  Score=146.31  Aligned_cols=144  Identities=24%  Similarity=0.315  Sum_probs=120.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCe------E
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSK------K   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------~   99 (183)
                      +|.+...||+|++|.||+|... ++..+++|.+....  ......+..|+.+++.+.|+|++++.+++.....      .
T Consensus        16 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   95 (343)
T cd07851          16 RYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDV   95 (343)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccE
Confidence            3556678999999999999876 46789999876432  2233557789999999999999999888765544      8


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|++ +++|.+++..  ..+++..+..++.|++.|+.|+|+.   +++|+||+|+||+++.++.++|+|||++...
T Consensus        96 ~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~  168 (343)
T cd07851          96 YLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARHT  168 (343)
T ss_pred             EEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccccccccc
Confidence            9999998 6699888854  3467788888999999999999998   9999999999999999999999999999754

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.85  E-value=2e-20  Score=136.98  Aligned_cols=130  Identities=20%  Similarity=0.134  Sum_probs=109.1

Q ss_pred             CcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHHHHHhc
Q 048219           39 GSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN  117 (183)
Q Consensus        39 g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~  117 (183)
                      |.+|.||++.+. +++.+++|.+.....     ...|...+....|||++++++.+...+..+++||++++++|.+.+..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-----YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh-----hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            789999999975 578899999865321     22334444455699999999999999999999999999999998865


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          118 AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       118 ~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      .. .+++.....++.|++.|+.|+|+.   +++|+|+||+||+++.++.++++|||.+..
T Consensus        79 ~~-~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~  134 (237)
T cd05576          79 FL-NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSE  134 (237)
T ss_pred             hc-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhc
Confidence            33 467788888999999999999998   999999999999999999999999998754

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.84  E-value=5.7e-20  Score=132.68  Aligned_cols=146  Identities=31%  Similarity=0.417  Sum_probs=126.5

Q ss_pred             chhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhH-HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           31 GFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDE-REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      .+.+.||+|++|.+|++.... ++.+++|.+...... ....+..|+..+..++|++++++++.+......++++|++++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   81 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG   81 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence            345679999999999999765 788999998765443 456788899999999999999999999888899999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++|.+++.......++.....++.+++.++.++|+.   +++|+|++++|++++.++.++++|||.+....
T Consensus        82 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~  149 (225)
T smart00221       82 GDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIH  149 (225)
T ss_pred             CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEec
Confidence            999998865433266777788899999999999998   99999999999999999999999999998664

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.84  E-value=1.7e-20  Score=144.37  Aligned_cols=143  Identities=22%  Similarity=0.300  Sum_probs=116.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCC------eE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVS------KK   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~   99 (183)
                      .+.+.+.||+|+||.||+|... .+..+++|.+.+...  .....+..|+.+++.+.|+|++++.+++....      ..
T Consensus        16 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   95 (342)
T cd07879          16 RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDF   95 (342)
T ss_pred             ceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceE
Confidence            3455578999999999999865 578899998865321  12345778999999999999999999886542      46


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|++. .++.....   ..+++..+..++.|++.|+.|+|++   +++|+||+|+||+++.++.++++|||+++..
T Consensus        96 ~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~  167 (342)
T cd07879          96 YLVMPYMQ-TDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARHA  167 (342)
T ss_pred             EEEecccc-cCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence            89999985 46666542   3466777788899999999999998   9999999999999999999999999999753

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.84  E-value=1.9e-20  Score=152.24  Aligned_cols=144  Identities=31%  Similarity=0.444  Sum_probs=120.6

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEEe-----CCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSLE-----VSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-----~~~~~l  101 (183)
                      .+.|.+.+|.|++|.||++... .++..++|+....... ...+-.|.++++..+ |||++.++++|.-     .+.+++
T Consensus        20 ~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL   98 (953)
T KOG0587|consen   20 IFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL   98 (953)
T ss_pred             ccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence            3557789999999999999855 5677778877654322 345666788888774 9999999999862     557999


Q ss_pred             EEeccCCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219          102 VYEYMSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      |||+|.+|++.++++.- +..+.+..+..|+.+++.|+.+||.+   .++|||+|-.||++..++.+|++|||++.
T Consensus        99 VMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSa  171 (953)
T KOG0587|consen   99 VMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSA  171 (953)
T ss_pred             EeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeee
Confidence            99999999999999753 34567888888999999999999998   99999999999999999999999999986

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=9.9e-21  Score=144.22  Aligned_cols=144  Identities=26%  Similarity=0.347  Sum_probs=117.9

Q ss_pred             chhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhh--cCCCceeeeeceEEeCC----eEEEEEe
Q 048219           31 GFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR--THHRNLVRLLGYSLEVS----KKILVYE  104 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~----~~~lv~e  104 (183)
                      .+.+.||+|.||.||+|.++. ..||+|++..   .+.....+|.++.+.  ++|+||+.+.++-...+    .+++|++
T Consensus       214 ~L~e~IGkGRyGEVwrG~wrG-e~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTd  289 (513)
T KOG2052|consen  214 VLQEIIGKGRFGEVWRGRWRG-EDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTD  289 (513)
T ss_pred             EEEEEecCccccceeeccccC-CceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeee
Confidence            345789999999999998765 4689999864   234567778887764  59999999988865332    5799999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhC-----CCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE-----CETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-----~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |-+.|||++++..  ..++....+.++..++.||.+||..     .+..|.|||||..||++..+++..|+|+|+|--++
T Consensus       290 YHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~  367 (513)
T KOG2052|consen  290 YHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  367 (513)
T ss_pred             cccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEec
Confidence            9999999999965  4566667777889999999999953     35679999999999999999999999999997664


Q ss_pred             c
Q 048219          180 A  180 (183)
Q Consensus       180 ~  180 (183)
                      .
T Consensus       368 ~  368 (513)
T KOG2052|consen  368 S  368 (513)
T ss_pred             c
Confidence            4

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.84  E-value=2.3e-20  Score=140.89  Aligned_cols=147  Identities=20%  Similarity=0.187  Sum_probs=103.6

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcCC----cEEEEEEcc--chhhHHH---------HHHHHHHHHHhhcCCCceeeeec
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMINR----QLVAVNRLE--KVLDERE---------REFQTEIKVIGRTHHRNLVRLLG   91 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~~----~~~~ik~~~--~~~~~~~---------~~~~~e~~~l~~l~h~~i~~~~~   91 (183)
                      ...|.+.+.||+|+||.||+|.....    ..+++|...  .......         .....+...+..+.|++++++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            34577788999999999999986543    334444322  1100000         11122334455678999999988


Q ss_pred             eEEeCC----eEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcc
Q 048219           92 YSLEVS----KKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCA  167 (183)
Q Consensus        92 ~~~~~~----~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~  167 (183)
                      .+....    ..+++++.+. .++.+.+... ...++..+..++.|++.|+.|+|+.   +++||||||+||+++.++.+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~  165 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRG  165 (294)
T ss_pred             eeeEecCCceEEEEEEehhc-cCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcE
Confidence            765433    3467777764 4666655432 2345667778999999999999998   99999999999999999999


Q ss_pred             cccceeccccc
Q 048219          168 KNFRLWIGKVD  178 (183)
Q Consensus       168 ~i~dfg~a~~~  178 (183)
                      +|+|||+|+..
T Consensus       166 ~l~DFGla~~~  176 (294)
T PHA02882        166 YIIDYGIASHF  176 (294)
T ss_pred             EEEEcCCceee
Confidence            99999999754

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.84  E-value=2.7e-20  Score=148.64  Aligned_cols=147  Identities=21%  Similarity=0.315  Sum_probs=107.1

Q ss_pred             HhchhcccCcCcCceEEEEEE-----------------cCCcEEEEEEccchhhHHHHH--------------HHHHHHH
Q 048219           29 TDGFKEKVGRGSSGTVYKGAM-----------------INRQLVAVNRLEKVLDERERE--------------FQTEIKV   77 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~-----------------~~~~~~~ik~~~~~~~~~~~~--------------~~~e~~~   77 (183)
                      .+.+.++||+|+||.||+|..                 ..+..|++|.+..........              ...|+..
T Consensus       146 ~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~  225 (507)
T PLN03224        146 DFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYM  225 (507)
T ss_pred             CceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHH
Confidence            355667899999999999863                 124568999876432221111              2335666


Q ss_pred             HhhcCCCce-----eeeeceEEe--------CCeEEEEEeccCCCCHHHHHhcCCC-----------------------C
Q 048219           78 IGRTHHRNL-----VRLLGYSLE--------VSKKILVYEYMSNGSLADILFNAEK-----------------------Q  121 (183)
Q Consensus        78 l~~l~h~~i-----~~~~~~~~~--------~~~~~lv~e~~~~~~l~~~l~~~~~-----------------------~  121 (183)
                      +.+++|.++     +++.++|..        .+..++|+||+++++|.+++.....                       .
T Consensus       226 l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~  305 (507)
T PLN03224        226 CAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDK  305 (507)
T ss_pred             HHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccccc
Confidence            666665543     555666542        3567999999999999988853211                       1


Q ss_pred             CChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          122 PNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       122 ~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ..+..+..++.|++.++.|+|+.   +++|+||||+||+++.++.++|+|||+|+..
T Consensus       306 ~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~  359 (507)
T PLN03224        306 RDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDM  359 (507)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCcccc
Confidence            23445667889999999999998   9999999999999999999999999999643

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.84  E-value=1.9e-20  Score=153.54  Aligned_cols=144  Identities=24%  Similarity=0.370  Sum_probs=124.0

Q ss_pred             chhcccCcCcCceEEEEEEc----C----CcEEEEEEccchhh-HHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEE
Q 048219           31 GFKEKVGRGSSGTVYKGAMI----N----RQLVAVNRLEKVLD-EREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~----~----~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~  100 (183)
                      .+.+.+|+|+||.|++|...    .    ...||+|.++.... .....+..|+.+|..+. |+|++.+.+++...+..+
T Consensus       299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~  378 (609)
T KOG0200|consen  299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLY  378 (609)
T ss_pred             cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceE
Confidence            45568999999999999733    1    34688998875432 34567899999999985 999999999998889999


Q ss_pred             EEEeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC
Q 048219          101 LVYEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR  165 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~  165 (183)
                      +++||+..|+|..++...+               ..++....+.++.||+.|+.||.+.   +++||||.++||++..+.
T Consensus       379 ~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~~~  455 (609)
T KOG0200|consen  379 VIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLITKNK  455 (609)
T ss_pred             EEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEecCCC
Confidence            9999999999999997655               2366778888999999999999998   999999999999999999


Q ss_pred             cccccceecccc
Q 048219          166 CAKNFRLWIGKV  177 (183)
Q Consensus       166 ~~~i~dfg~a~~  177 (183)
                      .+||+|||+|+-
T Consensus       456 ~~kIaDFGlar~  467 (609)
T KOG0200|consen  456 VIKIADFGLARD  467 (609)
T ss_pred             EEEEccccceec
Confidence            999999999984

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.84  E-value=2.7e-19  Score=127.22  Aligned_cols=142  Identities=33%  Similarity=0.437  Sum_probs=122.7

Q ss_pred             cCcCcCceEEEEEEcC-CcEEEEEEccchhhH-HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHHH
Q 048219           36 VGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDE-REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLAD  113 (183)
Q Consensus        36 lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~  113 (183)
                      ||+|++|.+|++.... +..+++|........ ....+.+|+..++.++|++++++.+++......++++|+++++++.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999998764 788899988754332 34568889999999999999999999998889999999999899999


Q ss_pred             HHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC-CCcccccceeccccccc
Q 048219          114 ILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE-NRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       114 ~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~-~~~~~i~dfg~a~~~~~  180 (183)
                      ++.......+......++.+++.++.++|+.   +++|+|++|.||+++. .+.++++|||.+.....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~  145 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTS  145 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccC
Confidence            9865433566777888999999999999998   9999999999999999 89999999999986543

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.83  E-value=5.5e-20  Score=132.42  Aligned_cols=136  Identities=18%  Similarity=0.289  Sum_probs=109.4

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchh---h-----HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL---D-----EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~---~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.||+|++|.||+|.. .+..+++|......   .     .....+.+|+.++..+.|++++.+..++......+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            4689999999999987 44567777643211   1     1123577899999999999888777777777888999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++|+++.+.+....    . ....++.+++.++.++|+.   +++|+|++|+||+++ ++.++++|||.|+...
T Consensus        81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~  145 (211)
T PRK14879         81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEFSK  145 (211)
T ss_pred             eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccCCC
Confidence            99999999885421    2 5567889999999999998   999999999999999 7889999999998754

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.83  E-value=1.2e-19  Score=156.34  Aligned_cols=136  Identities=27%  Similarity=0.478  Sum_probs=112.5

Q ss_pred             hhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           32 FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      ..+.||+|+||.||+|... .+..+++|.+......    ...|+..+++++||||+++++++.+.+..++||||+++++
T Consensus       694 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~  769 (968)
T PLN00113        694 EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKN  769 (968)
T ss_pred             cccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCc
Confidence            3457999999999999874 6788999988643221    1245788999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219          111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus       111 l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      |.+++..    +++..+..++.|++.|+.|+|..+..+++|||+||+||+++.++..++. ||.+.
T Consensus       770 L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~  830 (968)
T PLN00113        770 LSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPG  830 (968)
T ss_pred             HHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccc
Confidence            9999843    6778888899999999999995444599999999999999988776654 55543

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.83  E-value=2.5e-20  Score=132.62  Aligned_cols=148  Identities=22%  Similarity=0.254  Sum_probs=120.0

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEE-cCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCC-CceeeeeceEEeCCeEEEE
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH-RNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv  102 (183)
                      +..-.+.+..+||.|+||.+|.|.. ..+..||+|.=...  ..-..+.-|..+.+.+++ ..|+.+..+........+|
T Consensus        12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV   89 (341)
T KOG1163|consen   12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV   89 (341)
T ss_pred             eeccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence            3444577788999999999999985 46889999874321  112346678888888875 4566666666677888999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC---Ccccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN---RCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~---~~~~i~dfg~a~~~  178 (183)
                      |+.+ |++|.+++..+.+.++-.+.+.++.|++.-++|+|.+   +++||||||+|+++.-+   +.+-++|||+|+-+
T Consensus        90 MdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky  164 (341)
T KOG1163|consen   90 MDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY  164 (341)
T ss_pred             eecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhh
Confidence            9988 8999999988777888888899999999999999998   99999999999998744   46889999999966

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.82  E-value=1.3e-19  Score=147.04  Aligned_cols=136  Identities=20%  Similarity=0.363  Sum_probs=107.2

Q ss_pred             hhcccCcCcCceEEEEEEcCCcEEEEEEccchh-------hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVL-------DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      ..+.||+|+||.||++.......+..+...+..       .....++.+|+.++..++|++++.+..++.+....+++||
T Consensus       337 ~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E  416 (535)
T PRK09605        337 PDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVME  416 (535)
T ss_pred             ccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEE
Confidence            356899999999999886554333222222110       1123457889999999999999887777777778899999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      |+++++|.+.+.         ....++.+++.++.++|+.   +++|+|+||+||++ .++.++++|||+|+....
T Consensus       417 ~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~~~~  479 (535)
T PRK09605        417 YIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYSDL  479 (535)
T ss_pred             ecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccccCCc
Confidence            999999988774         2345788999999999998   99999999999999 577899999999997643

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.82  E-value=3.9e-20  Score=133.60  Aligned_cols=145  Identities=13%  Similarity=0.203  Sum_probs=117.4

Q ss_pred             HhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeec-eEEeCCeEEEEEec
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLG-YSLEVSKKILVYEY  105 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~-~~~~~~~~~lv~e~  105 (183)
                      .+.+.+.+|+|-||.+.+++++. +..+++|.+.+.. ...+.+.+|...--.++ |.||+.-++ +|++.+.+++++|+
T Consensus        25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~  103 (378)
T KOG1345|consen   25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF  103 (378)
T ss_pred             hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence            36677899999999999999775 5667888876543 34567888888777775 788887654 46677888899999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec-CC-Ccccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD-EN-RCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~-~~-~~~~i~dfg~a~~~~  179 (183)
                      +|.|+|.+-+..  ...++.....++.|++.|+.|+|+.   .+||||||.+|||+- .+ -.+|++|||++....
T Consensus       104 aP~gdL~snv~~--~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen  104 APRGDLRSNVEA--AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG  174 (378)
T ss_pred             CccchhhhhcCc--ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccC
Confidence            999999887743  4566777778999999999999998   999999999999974 33 479999999987543

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.82  E-value=1.6e-19  Score=128.99  Aligned_cols=131  Identities=19%  Similarity=0.342  Sum_probs=103.5

Q ss_pred             cCcCcCceEEEEEEcCCcEEEEEEccchh--------hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           36 VGRGSSGTVYKGAMINRQLVAVNRLEKVL--------DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        36 lg~g~~g~v~~~~~~~~~~~~ik~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      ||+|++|.||++.. .+..+++|......        .....++.+|+.++..+.++++..+..++...+..+++||+++
T Consensus         2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            79999999999984 44567777643211        1112457789999999988776665555666777899999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |+++.+.+....     .   .++.+++.++.++|+.   +++|+|++|+||+++ ++.++++|||+|+...
T Consensus        81 g~~l~~~~~~~~-----~---~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~  140 (199)
T TIGR03724        81 GKPLKDVIEEGN-----D---ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSD  140 (199)
T ss_pred             CccHHHHHhhcH-----H---HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCCC
Confidence            999988774321     1   5788999999999998   999999999999999 7899999999998764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.82  E-value=4.9e-20  Score=136.37  Aligned_cols=150  Identities=20%  Similarity=0.272  Sum_probs=122.9

Q ss_pred             HHHHHhchhcccCcCcCceEEEEE-EcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEE
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv  102 (183)
                      +....+.+.++||+|+||.++.|. ..++..||||.=  ........+..|.+..+.+. .+.|+.++.+-...-+..+|
T Consensus        25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfE--PrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV  102 (449)
T KOG1165|consen   25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFE--PRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV  102 (449)
T ss_pred             EecccceeccccccCcceeeecccccccCceEEEEec--cccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence            344567788999999999999997 568889999872  22233456777888777775 57888877655556677899


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC-----Ccccccceecccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN-----RCAKNFRLWIGKV  177 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~-----~~~~i~dfg~a~~  177 (183)
                      +|.+ |.+|.+++.-+++.++..+..+++.|++.-+.++|++   .+|.||+||+|+|+...     +.+.++|||+|+.
T Consensus       103 idLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~  178 (449)
T KOG1165|consen  103 IDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE  178 (449)
T ss_pred             hhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence            9988 8999999988888899999999999999999999998   99999999999999754     3578999999998


Q ss_pred             ccc
Q 048219          178 DEA  180 (183)
Q Consensus       178 ~~~  180 (183)
                      +..
T Consensus       179 YrD  181 (449)
T KOG1165|consen  179 YRD  181 (449)
T ss_pred             hcC
Confidence            754

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.82  E-value=3.2e-19  Score=126.56  Aligned_cols=133  Identities=15%  Similarity=0.110  Sum_probs=101.5

Q ss_pred             hcccCcCcCceEEEEEEcCCcEEEEEEccchhh----HHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEeccC
Q 048219           33 KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLD----EREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        33 ~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      ...|++|.||.|+.+.. .+..+..+.+.....    .....+.+|+++|+++. ++++++++++    +..+++|||+.
T Consensus         7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~   81 (218)
T PRK12274          7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA   81 (218)
T ss_pred             ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence            35689999999997765 455566555543321    11224788999999996 4778888775    45789999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCC-CCCCEEecCCCcccccceecccccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI-KPQNILMDENRCAKNFRLWIGKVDEAR  181 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl-~~~nil~~~~~~~~i~dfg~a~~~~~~  181 (183)
                      |.+|.+....     .   ...+..|++.++.++|++   +|+|+|| ||+||+++.++.++|+|||+|.....+
T Consensus        82 G~~L~~~~~~-----~---~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~  145 (218)
T PRK12274         82 GAAMYQRPPR-----G---DLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR  145 (218)
T ss_pred             CccHHhhhhh-----h---hHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence            9888754311     1   124668899999999998   9999999 799999999999999999999976543

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=2.5e-21  Score=149.85  Aligned_cols=142  Identities=20%  Similarity=0.199  Sum_probs=121.2

Q ss_pred             cccCcCcCceEEEEEEcCCc-EEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           34 EKVGRGSSGTVYKGAMINRQ-LVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~-~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      ..||-|+||.|=++...... .+|+|.+++..   ......+..|-.+|.....+.|++++..|.+...+|+.||-|-||
T Consensus       426 aTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGG  505 (732)
T KOG0614|consen  426 ATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGG  505 (732)
T ss_pred             hhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCc
Confidence            47999999999887755433 47778777643   334567888999999999999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      .++..+...+ .++..+...++.-++.|+.|||++   +|+.|||||+|+++|..|.+||.|||+|+...
T Consensus       506 ElWTiLrdRg-~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~  571 (732)
T KOG0614|consen  506 ELWTILRDRG-SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG  571 (732)
T ss_pred             hhhhhhhhcC-CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhc
Confidence            9999997654 455666666888899999999998   99999999999999999999999999999654

>smart00090 RIO RIO-like kinase

Probab=99.81  E-value=2.8e-19  Score=130.83  Aligned_cols=141  Identities=16%  Similarity=0.174  Sum_probs=104.8

Q ss_pred             hchhcccCcCcCceEEEEE--EcCCcEEEEEEccchhhH------------------------HHHHHHHHHHHHhhcCC
Q 048219           30 DGFKEKVGRGSSGTVYKGA--MINRQLVAVNRLEKVLDE------------------------REREFQTEIKVIGRTHH   83 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~--~~~~~~~~ik~~~~~~~~------------------------~~~~~~~e~~~l~~l~h   83 (183)
                      +.+.+.||+|++|.||+|.  ..++..+++|.+......                        ....+..|+.++..+.+
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~  109 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE  109 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            5677899999999999998  457889999987642110                        11235679999988865


Q ss_pred             Cc--eeeeeceEEeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCC-ceecCCCCCCEE
Q 048219           84 RN--LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ-IIHCDIKPQNIL  160 (183)
Q Consensus        84 ~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~-i~H~dl~~~nil  160 (183)
                      ..  ++++++.    ...+++||++++.++....... ..........++.|++.++.++|++   + ++|+|+||+||+
T Consensus       110 ~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NIl  181 (237)
T smart00090      110 AGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNIL  181 (237)
T ss_pred             cCCCCCeeeEe----cCceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhEE
Confidence            32  3333332    2358999999987776544221 2233444567889999999999998   8 999999999999


Q ss_pred             ecCCCcccccceecccccc
Q 048219          161 MDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       161 ~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++ .+.++++|||.|....
T Consensus       182 i~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      182 VH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             EE-CCCEEEEEChhhhccC
Confidence            99 7889999999998553

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.81  E-value=1.6e-19  Score=135.37  Aligned_cols=159  Identities=18%  Similarity=0.229  Sum_probs=126.6

Q ss_pred             CCceeCHHHHHHHHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCC--C----ceee
Q 048219           16 TPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHH--R----NLVR   88 (183)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h--~----~i~~   88 (183)
                      -+..+..++....++.+.+.+|+|+||.|-++.+.. +..+|+|+++.... ..+....|+++|+++.+  |    -++.
T Consensus        77 GH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~  155 (415)
T KOG0671|consen   77 GHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQ  155 (415)
T ss_pred             ceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEe
Confidence            334455556667778888999999999999999765 56788888876543 33456779999999842  1    3677


Q ss_pred             eeceEEeCCeEEEEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC---
Q 048219           89 LLGYSLEVSKKILVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN---  164 (183)
Q Consensus        89 ~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~---  164 (183)
                      +.++|...++.+||+|.+ |.|+++++.... ..++...+..++.|++.++.+||+.   +++|.||||+||++-.+   
T Consensus       156 m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~  231 (415)
T KOG0671|consen  156 MRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYF  231 (415)
T ss_pred             eehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceE
Confidence            888899999999999988 779999997644 4466677888999999999999998   99999999999998432   


Q ss_pred             -----------------Ccccccceecccccc
Q 048219          165 -----------------RCAKNFRLWIGKVDE  179 (183)
Q Consensus       165 -----------------~~~~i~dfg~a~~~~  179 (183)
                                       ..++++|||.|.+..
T Consensus       232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~  263 (415)
T KOG0671|consen  232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDH  263 (415)
T ss_pred             EEeccCCccceeccCCCcceEEEecCCcceec
Confidence                             247899999998753

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.81  E-value=2.6e-19  Score=129.17  Aligned_cols=140  Identities=14%  Similarity=0.123  Sum_probs=109.2

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHH---HH------HHHHHHHHhhcCCCceeeeeceEEe
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERE---RE------FQTEIKVIGRTHHRNLVRLLGYSLE   95 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~---~~------~~~e~~~l~~l~h~~i~~~~~~~~~   95 (183)
                      +-..++...+.+|.|.||.||.+.. ++..+++|.+.+......   ..      +.+|+..+.++.|+++..+..++..
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~  106 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL  106 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence            3344566668899999999999765 566799999864332221   22      4678889999999999999887664


Q ss_pred             C--------CeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcc
Q 048219           96 V--------SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCA  167 (183)
Q Consensus        96 ~--------~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~  167 (183)
                      .        +..+++|||++|.+|.+...     .+.    ....+++.++..+|..   +++|+|++|+|++++.++ +
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i  173 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-L  173 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-E
Confidence            3        35789999999999977631     112    2456899999999998   999999999999999888 9


Q ss_pred             cccceeccccc
Q 048219          168 KNFRLWIGKVD  178 (183)
Q Consensus       168 ~i~dfg~a~~~  178 (183)
                      +++|||.++..
T Consensus       174 ~liDfg~~~~~  184 (232)
T PRK10359        174 RIIDLSGKRCT  184 (232)
T ss_pred             EEEECCCcccc
Confidence            99999988755

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=3.3e-19  Score=137.41  Aligned_cols=133  Identities=23%  Similarity=0.340  Sum_probs=109.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcC-----C---CceeeeeceEEe---
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTH-----H---RNLVRLLGYSLE---   95 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-----h---~~i~~~~~~~~~---   95 (183)
                      .+|.+..+||+|-|++||+|.+.. ..-||+|+.+.. +..++....||.+|+++.     +   ..||++++.|..   
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            567777899999999999999765 556788877544 455667788999999873     2   369999999963   


Q ss_pred             -CCeEEEEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC
Q 048219           96 -VSKKILVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN  164 (183)
Q Consensus        96 -~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~  164 (183)
                       ..++++|+|++ |..|..++.... +.++...+..|+.||+.||.|||..  ++|+|.||||+|||+...
T Consensus       157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLLCST  224 (590)
T ss_pred             CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeeeecc
Confidence             34789999998 778888887654 5567788889999999999999987  599999999999999754

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.81  E-value=1.4e-20  Score=135.53  Aligned_cols=140  Identities=24%  Similarity=0.288  Sum_probs=106.2

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhh-HHHHHHHHHHHHH-hhcCCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-EREREFQTEIKVI-GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      ..||.|+||.|++-..+ .++..|+|++..... ....+++.|.+.. +.-+.|+||+++|+...++..++-||.+. .|
T Consensus        70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~S  148 (361)
T KOG1006|consen   70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-IS  148 (361)
T ss_pred             HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-hh
Confidence            36999999999998865 588999999864322 3345677777755 44468999999999999999999999995 46


Q ss_pred             HHHHHhc----CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219          111 LADILFN----AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus       111 l~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      +..+...    .....++.-.-.|..-...||.||...  +.|+|||+||+|||++..|.+|+||||++.
T Consensus       149 lDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcG  216 (361)
T KOG1006|consen  149 LDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICG  216 (361)
T ss_pred             HHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchH
Confidence            6654421    112233332223334456799999875  599999999999999999999999999985

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.81  E-value=8.3e-19  Score=127.66  Aligned_cols=137  Identities=31%  Similarity=0.411  Sum_probs=118.3

Q ss_pred             cCceEEEEEEcC-CcEEEEEEccchhhHH-HHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHHHHHhc
Q 048219           40 SSGTVYKGAMIN-RQLVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN  117 (183)
Q Consensus        40 ~~g~v~~~~~~~-~~~~~ik~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~  117 (183)
                      +||.+|++.... +..+++|.+....... ...+..|+..++.++|++++++.+.+......++++|++++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            478999999764 7889999987543322 56788999999999999999999999988999999999999899998865


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          118 AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       118 ~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      ... .+......++.+++.++.++|+.   +++|+|++|+||+++.++.++++|||.+.....
T Consensus        81 ~~~-~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~  139 (244)
T smart00220       81 RGR-LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDP  139 (244)
T ss_pred             ccC-CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecc
Confidence            332 56777888999999999999998   999999999999999999999999999986543

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.80  E-value=2.4e-19  Score=145.90  Aligned_cols=142  Identities=24%  Similarity=0.273  Sum_probs=96.4

Q ss_pred             HhchhcccCcCcCceEEEEEEcC-----CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeece------EEeCC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY------SLEVS   97 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~------~~~~~   97 (183)
                      .+.+.+.||+|+||.||+|....     +..+++|.+......  ....++  .+....+.++..+...      .....
T Consensus       133 ~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~  208 (566)
T PLN03225        133 DFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSKKED  208 (566)
T ss_pred             CeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccccCC
Confidence            35566789999999999998654     578999987542211  111111  1111111112111111      23456


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCCC-------------------ChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCC
Q 048219           98 KKILVYEYMSNGSLADILFNAEKQP-------------------NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN  158 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~~~~-------------------~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~n  158 (183)
                      ..++++||+++++|.+++.......                   ....+..++.|++.||.|+|++   +|+||||||+|
T Consensus       209 ~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~N  285 (566)
T PLN03225        209 EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQN  285 (566)
T ss_pred             ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHHH
Confidence            7899999999999999886432110                   0122345789999999999998   99999999999


Q ss_pred             EEecC-CCcccccceecccc
Q 048219          159 ILMDE-NRCAKNFRLWIGKV  177 (183)
Q Consensus       159 il~~~-~~~~~i~dfg~a~~  177 (183)
                      ||++. .+.+||+|||+|+.
T Consensus       286 ILl~~~~~~~KL~DFGlA~~  305 (566)
T PLN03225        286 IIFSEGSGSFKIIDLGAAAD  305 (566)
T ss_pred             EEEeCCCCcEEEEeCCCccc
Confidence            99996 57899999999974

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.80  E-value=7.6e-21  Score=150.92  Aligned_cols=148  Identities=27%  Similarity=0.351  Sum_probs=127.5

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      -.+++...+|.|++|-||++++. .+++.++|.++-....+..-++.|+-.++..+|+||+.+++.|...+.+++.||||
T Consensus        15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc   94 (829)
T KOG0576|consen   15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC   94 (829)
T ss_pred             cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence            34566778999999999999966 57788888887655556677888999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      .+|++++.-. ....+.+.++...+++.++|+.|+|+.   +-+|||+|-.||++.+.+.+|+.|||.+--+.
T Consensus        95 gggslQdiy~-~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqit  163 (829)
T KOG0576|consen   95 GGGSLQDIYH-VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQIT  163 (829)
T ss_pred             CCCcccceee-ecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhh
Confidence            9999988553 334566777778899999999999998   88999999999999999999999999986443

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=1.1e-19  Score=134.98  Aligned_cols=143  Identities=24%  Similarity=0.236  Sum_probs=118.9

Q ss_pred             hhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH---HHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEecc
Q 048219           32 FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE---REREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +...||+|++..|.+++.. +.+.+|+|.+++....   +....+.|-.+..+. +||.++.+..+|+++..+++|.||+
T Consensus       254 ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv  333 (593)
T KOG0695|consen  254 LLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYV  333 (593)
T ss_pred             eeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEe
Confidence            4468999999999999855 5678999998775432   223456677777655 5999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +||+|.....+. +.+++.-...+..+|+.||+|||++   +|+.||||.+|+++|..|.+|+.|+|+++.+
T Consensus       334 ~ggdlmfhmqrq-rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~  401 (593)
T KOG0695|consen  334 NGGDLMFHMQRQ-RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG  401 (593)
T ss_pred             cCcceeeehhhh-hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC
Confidence            999997655443 4456666666899999999999998   9999999999999999999999999999865

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.79  E-value=2e-19  Score=142.21  Aligned_cols=144  Identities=24%  Similarity=0.255  Sum_probs=116.2

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .+.+...+|.|+|+.|..+... +.+..++|++.+.    .....+|+.++... +|+|++++.+.+.+..+.|+|||.+
T Consensus       323 ~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l  398 (612)
T KOG0603|consen  323 SYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELL  398 (612)
T ss_pred             hhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeehhc
Confidence            4566678999999999988865 4667788888764    22344567655544 6999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe-cCCCcccccceecccccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM-DENRCAKNFRLWIGKVDEAR  181 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~-~~~~~~~i~dfg~a~~~~~~  181 (183)
                      .++.+...+..... .. ..+..|+.+++.++.|||++   +++||||||+|||+ +..++++|+|||.++..+++
T Consensus       399 ~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~  469 (612)
T KOG0603|consen  399 DGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS  469 (612)
T ss_pred             cccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence            99888777654322 22 56667999999999999998   99999999999999 58899999999999876543

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.78  E-value=2.5e-18  Score=122.81  Aligned_cols=136  Identities=16%  Similarity=0.168  Sum_probs=102.2

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchhh----------------------HHHHHHHHHHHHHhhcCCCc--
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLD----------------------EREREFQTEIKVIGRTHHRN--   85 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~----------------------~~~~~~~~e~~~l~~l~h~~--   85 (183)
                      +.+.+.||+|+||.||++...++..+++|.+.....                      ........|..++..+.+++  
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   96 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP   96 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            556678999999999999887888999997542110                      01123566888888887663  


Q ss_pred             eeeeeceEEeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC
Q 048219           86 LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR  165 (183)
Q Consensus        86 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~  165 (183)
                      ++.+.    ..+..+++|||++++++......       .....++.+++.++.++|..   +++|+|++|+||++++++
T Consensus        97 v~~~~----~~~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~~~  162 (198)
T cd05144          97 VPKPI----DWNRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDDDE  162 (198)
T ss_pred             CCcee----ecCCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcCCC
Confidence            33332    23456899999999888664321       12345778999999999997   999999999999999999


Q ss_pred             cccccceecccccc
Q 048219          166 CAKNFRLWIGKVDE  179 (183)
Q Consensus       166 ~~~i~dfg~a~~~~  179 (183)
                      .++++|||+|.-..
T Consensus       163 ~~~liDfg~~~~~~  176 (198)
T cd05144         163 KIYIIDWPQMVSTD  176 (198)
T ss_pred             cEEEEECCccccCC
Confidence            99999999996543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.78  E-value=3.1e-19  Score=135.12  Aligned_cols=138  Identities=22%  Similarity=0.356  Sum_probs=116.9

Q ss_pred             hchhcccCcCcCceEEEEEEcC----CcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      +...+++|+|+|+.||++....    ...+++|.+....  ...++.+|++.|..+. +.|++++.+++...+...+|+|
T Consensus        38 ~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp  115 (418)
T KOG1167|consen   38 YKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLP  115 (418)
T ss_pred             hhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEec
Confidence            3445789999999999998543    5678888876532  2346889999998885 8899999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC-Ccccccceeccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN-RCAKNFRLWIGK  176 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~-~~~~i~dfg~a~  176 (183)
                      |++..+..++...    ++...+..++..++.||.++|.+   +|+|||+||+|++++.. +.-.|+|||+|.
T Consensus       116 ~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  116 YFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             ccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHH
Confidence            9999888887743    45667777899999999999998   99999999999999865 788899999997

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.78  E-value=1.5e-18  Score=132.72  Aligned_cols=144  Identities=21%  Similarity=0.257  Sum_probs=113.4

Q ss_pred             HhchhcccCcCcCceEEEEEEcCC--cEEEEEEccchhhHHHHHHHHHHHHHhhcCC----CceeeeeceE-EeCCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINR--QLVAVNRLEKVLDEREREFQTEIKVIGRTHH----RNLVRLLGYS-LEVSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h----~~i~~~~~~~-~~~~~~~l  101 (183)
                      .+.+...||+|+||.||.+.....  ..+++|.-..........+..|..++..+..    +++..+.... ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            677888999999999999997654  3566665433211111146667888877752    4777777777 46678899


Q ss_pred             EEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC-----Ccccccceecc
Q 048219          102 VYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN-----RCAKNFRLWIG  175 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~-----~~~~i~dfg~a  175 (183)
                      ||+.+ |.+|.++..... +.++..+...++.|++.+|.++|+.   +++|||+||+|++++..     ..+.++|||+|
T Consensus        99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla  174 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA  174 (322)
T ss_pred             EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence            99977 889999886554 6778888999999999999999998   99999999999999865     46899999999


Q ss_pred             c
Q 048219          176 K  176 (183)
Q Consensus       176 ~  176 (183)
                      +
T Consensus       175 r  175 (322)
T KOG1164|consen  175 R  175 (322)
T ss_pred             c
Confidence            8

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.76  E-value=3.2e-18  Score=138.93  Aligned_cols=139  Identities=29%  Similarity=0.369  Sum_probs=108.9

Q ss_pred             hcccCcCcCc-eEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           33 KEKVGRGSSG-TVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        33 ~~~lg~g~~g-~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      .+.+|.|+.| .||+|... ++.||+|++-..   ...-+.+|+.+|+.- .||||+++++.-.++...||..|.| .++
T Consensus       514 ~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~~s  588 (903)
T KOG1027|consen  514 KEILGYGSNGTVVFRGVYE-GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-ACS  588 (903)
T ss_pred             HHHcccCCCCcEEEEEeeC-CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-hhh
Confidence            3578999988 47888654 458998887543   334567899999876 5999999998888889999999999 579


Q ss_pred             HHHHHhcC--CCCCCh-HHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC---C--Ccccccceecccccc
Q 048219          111 LADILFNA--EKQPNW-IERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE---N--RCAKNFRLWIGKVDE  179 (183)
Q Consensus       111 l~~~l~~~--~~~~~~-~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~---~--~~~~i~dfg~a~~~~  179 (183)
                      |.+++...  ...... .....+..|++.|+.+||+-   +|+||||||.|||++.   +  ..++|+|||+++-.+
T Consensus       589 L~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  589 LQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             HHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence            99999763  111111 23355778999999999996   9999999999999976   2  468999999999653

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.75  E-value=5.1e-18  Score=132.04  Aligned_cols=161  Identities=18%  Similarity=0.195  Sum_probs=131.3

Q ss_pred             CCCCCceeCHHHHHHHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCC------Cc
Q 048219           13 TLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH------RN   85 (183)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h------~~   85 (183)
                      +.+-.+.+.++++--.+|.+....|+|-|+.|..|.+. .+..||||++.+..... +.=+.|+++|++|..      -+
T Consensus       417 DaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~-KtGl~EleiLkKL~~AD~Edk~H  495 (752)
T KOG0670|consen  417 DAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMH-KTGLKELEILKKLNDADPEDKFH  495 (752)
T ss_pred             cccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHh-hhhhHHHHHHHHhhccCchhhhH
Confidence            45556667788887788888888999999999999976 47799999997653322 233568999998853      27


Q ss_pred             eeeeeceEEeCCeEEEEEeccCCCCHHHHHhcCCC--CCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC
Q 048219           86 LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEK--QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE  163 (183)
Q Consensus        86 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~  163 (183)
                      .++++..|...+++|+|+|-+ ...|-+.+...+.  .+....+..++.|+..||..|..   ++|+|.||||.|||+++
T Consensus       496 clrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE  571 (752)
T KOG0670|consen  496 CLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNE  571 (752)
T ss_pred             HHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEecc
Confidence            888999999999999999988 4589999987653  35566777899999999999986   49999999999999998


Q ss_pred             C-Ccccccceeccccc
Q 048219          164 N-RCAKNFRLWIGKVD  178 (183)
Q Consensus       164 ~-~~~~i~dfg~a~~~  178 (183)
                      . ..+||||||.|.+.
T Consensus       572 ~k~iLKLCDfGSA~~~  587 (752)
T KOG0670|consen  572 SKNILKLCDFGSASFA  587 (752)
T ss_pred             CcceeeeccCcccccc
Confidence            7 57999999999765

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.74  E-value=2.3e-17  Score=112.00  Aligned_cols=137  Identities=15%  Similarity=0.164  Sum_probs=108.8

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCC--CceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH--RNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      +.+++|.++.||++...+ ..+++|.......  ...+..|+..+..+++  ..++++..+....+..++++|++++.++
T Consensus         4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~   80 (155)
T cd05120           4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL   80 (155)
T ss_pred             eecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence            468999999999998755 5678888765432  3467788898988876  4788888877777789999999988766


Q ss_pred             HHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccccc
Q 048219          112 ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEAR  181 (183)
Q Consensus       112 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~~  181 (183)
                      ...        +......+..+++.++..+|.....+++|+|++|+|++++..+.++++|||.|......
T Consensus        81 ~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~~  142 (155)
T cd05120          81 DEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPPA  142 (155)
T ss_pred             ccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCChH
Confidence            543        23445567789999999999853347999999999999999899999999999876543

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.72  E-value=6.8e-17  Score=114.22  Aligned_cols=136  Identities=15%  Similarity=0.184  Sum_probs=92.7

Q ss_pred             hcccCcCcCceEEEEEEcCCcEEEEEEccchhhH--HHH----------------------HHHHHHHHHhhcCCCc--e
Q 048219           33 KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE--RER----------------------EFQTEIKVIGRTHHRN--L   86 (183)
Q Consensus        33 ~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~--~~~----------------------~~~~e~~~l~~l~h~~--i   86 (183)
                      .+.||+|+||.||+|...++..+++|.+......  ...                      ....|...+..+.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            3569999999999998777889999987542211  000                      1134555555553332  3


Q ss_pred             eeeeceEEeCCeEEEEEeccCCCCHHH-HHhcCCCCCChHHHHHHHHHHHHHHHHhhh-CCCCCceecCCCCCCEEecCC
Q 048219           87 VRLLGYSLEVSKKILVYEYMSNGSLAD-ILFNAEKQPNWIERTGIARDIARGILYLHD-ECETQIIHCDIKPQNILMDEN  164 (183)
Q Consensus        87 ~~~~~~~~~~~~~~lv~e~~~~~~l~~-~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~~i~H~dl~~~nil~~~~  164 (183)
                      .++++.    ...+++|||++++++.. .+....  . ......++.+++.++.++|. .   +++|+|++|+||+++ +
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~-~~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~-~  150 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--L-LEDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD-D  150 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhhhh--h-cccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-C
Confidence            333322    34589999999843321 111110  0 03445678899999999998 6   999999999999999 8


Q ss_pred             Ccccccceecccccc
Q 048219          165 RCAKNFRLWIGKVDE  179 (183)
Q Consensus       165 ~~~~i~dfg~a~~~~  179 (183)
                      +.++++|||.|....
T Consensus       151 ~~~~liDfg~a~~~~  165 (187)
T cd05119         151 GKVYIIDVPQAVEID  165 (187)
T ss_pred             CcEEEEECccccccc
Confidence            899999999997554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.69  E-value=1.9e-17  Score=121.89  Aligned_cols=137  Identities=23%  Similarity=0.362  Sum_probs=105.1

Q ss_pred             ccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC------eEEEEEec
Q 048219           35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS------KKILVYEY  105 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~  105 (183)
                      -+|.|+- .|-.+.+. .++.+++|.+....  ....++..+|..++..++|+|+++++.+|....      ..|+|||+
T Consensus        24 p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~  102 (369)
T KOG0665|consen   24 PIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMEL  102 (369)
T ss_pred             ccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHh
Confidence            3455555 44444433 46778888765432  122456788999999999999999999985332      46899999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +. .++...+..   .++-.++..+..|++.|+.++|+.   +|+||||||+||++..++.+||.|||+|+-.+
T Consensus       103 m~-~nl~~vi~~---elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~  169 (369)
T KOG0665|consen  103 MD-ANLCQVILM---ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTED  169 (369)
T ss_pred             hh-hHHHHHHHH---hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccC
Confidence            95 477776643   234456667889999999999998   99999999999999999999999999998654

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.69  E-value=8e-16  Score=112.82  Aligned_cols=135  Identities=16%  Similarity=0.150  Sum_probs=99.1

Q ss_pred             ccC-cCcCceEEEEEEcCCcEEEEEEccchh------h-------HHHHHHHHHHHHHhhcCCCce--eeeeceEEeC-C
Q 048219           35 KVG-RGSSGTVYKGAMINRQLVAVNRLEKVL------D-------EREREFQTEIKVIGRTHHRNL--VRLLGYSLEV-S   97 (183)
Q Consensus        35 ~lg-~g~~g~v~~~~~~~~~~~~ik~~~~~~------~-------~~~~~~~~e~~~l~~l~h~~i--~~~~~~~~~~-~   97 (183)
                      .+| .|+.|.+|.+... +..+++|...+..      .       ....++.+|+.++..+.|+++  +.+.++.... .
T Consensus        38 ~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~  116 (239)
T PRK01723         38 VVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG  116 (239)
T ss_pred             eeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence            566 6788888887654 4567777664311      0       122457889999999988775  5566654332 2


Q ss_pred             ---eEEEEEeccCC-CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccccee
Q 048219           98 ---KKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLW  173 (183)
Q Consensus        98 ---~~~lv~e~~~~-~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg  173 (183)
                         ..+++||++++ .++.+++...  .++..    ...+++.++.++|++   +|+|+|+||+||+++.++.++++|||
T Consensus       117 ~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LIDfg  187 (239)
T PRK01723        117 LFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLIDFD  187 (239)
T ss_pred             cceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEECC
Confidence               23599999997 6888887542  22222    357899999999998   99999999999999988899999999


Q ss_pred             cccccc
Q 048219          174 IGKVDE  179 (183)
Q Consensus       174 ~a~~~~  179 (183)
                      .+++..
T Consensus       188 ~~~~~~  193 (239)
T PRK01723        188 RGELRT  193 (239)
T ss_pred             CcccCC
Confidence            999865

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.67  E-value=2e-15  Score=113.68  Aligned_cols=143  Identities=34%  Similarity=0.473  Sum_probs=119.1

Q ss_pred             chhcccCcCcCceEEEEEEcCCcEEEEEEccchhhH---HHHHHHHHHHHHhhcCCC-ceeeeeceEEeCCeEEEEEecc
Q 048219           31 GFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHR-NLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .+.+.+|.|+|+.||.+...  ..+++|.+......   ....+.+|+.++..+.|+ +++++.+.+......+++++++
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   80 (384)
T COG0515           3 RILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV   80 (384)
T ss_pred             eeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence            44567899999999999876  66778877654322   356788899999999988 7999999997777789999999


Q ss_pred             CCCCHHHHHhcCC--CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC-cccccceeccccc
Q 048219          107 SNGSLADILFNAE--KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR-CAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~-~~~i~dfg~a~~~  178 (183)
                      .++++.+.+....  ..........+..|++.++.++|..   +++|||+||+||+++..+ .++++|||+++..
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~  152 (384)
T COG0515          81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLL  152 (384)
T ss_pred             CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceec
Confidence            9999997665443  1567778888999999999999998   899999999999999988 7999999999743

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.65  E-value=1.7e-16  Score=133.05  Aligned_cols=146  Identities=23%  Similarity=0.231  Sum_probs=111.6

Q ss_pred             HHHHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcC---CCceeeeeceEEeCCeEE
Q 048219           24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH---HRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        24 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~  100 (183)
                      ++....+.+.+.+|+|++|.||+|...+++++|+|.=++..+=...   .-..++.+|+   -+.++.+..++..++..+
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfY---I~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~  770 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFY---ICLQVMERLKPQMLPSIMHISSAHVFQNASV  770 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeee---ehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence            4445567788899999999999999888999999986543211000   0011222222   245666777777888889


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC-------CCccccccee
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE-------NRCAKNFRLW  173 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~-------~~~~~i~dfg  173 (183)
                      +++||.+.|+|.+++. ..+.+++.....++.|++..+..||+.   +|||+||||+|+++..       +..++|+|||
T Consensus       771 lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG  846 (974)
T KOG1166|consen  771 LVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFG  846 (974)
T ss_pred             eeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEecc
Confidence            9999999999999886 456678888888999999999999998   9999999999999843       3468999999


Q ss_pred             ccc
Q 048219          174 IGK  176 (183)
Q Consensus       174 ~a~  176 (183)
                      -|-
T Consensus       847 ~si  849 (974)
T KOG1166|consen  847 RSI  849 (974)
T ss_pred             cce
Confidence            763

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=4e-14  Score=97.75  Aligned_cols=134  Identities=20%  Similarity=0.381  Sum_probs=99.6

Q ss_pred             ccCcCcCceEEEEEEcCCcEEEEEEccchh-------hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVL-------DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .+.+|+-+.++.+.+.....+...++.+..       .-...+..+|+.++..+.-..+..+.-+..+++...|+|||++
T Consensus         3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~   82 (204)
T COG3642           3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIE   82 (204)
T ss_pred             hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeC
Confidence            467888888888765543333333343322       1123567889999988865566666666678888899999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      |..+.+.+...        ...++..+-.-+.-||.+   +|+|+||+++|+++...+ +.++|||++.+-+.
T Consensus        83 G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~  143 (204)
T COG3642          83 GELLKDALEEA--------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEFSDE  143 (204)
T ss_pred             ChhHHHHHHhc--------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCccccccc
Confidence            98888888653        134667777788899998   999999999999998766 88999999997654

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.57  E-value=4.5e-15  Score=112.46  Aligned_cols=145  Identities=21%  Similarity=0.288  Sum_probs=114.0

Q ss_pred             HhchhcccCcCcCceEEEEEEcCC------cEEEEEEccc-hhhHHHHHHHHHHHHHhhcCCCceeeeeceEEe-CCeEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINR------QLVAVNRLEK-VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE-VSKKI  100 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~------~~~~ik~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~  100 (183)
                      +..+...+.+|+||.||.|.+++.      +.+.+|.++. ..+.+...++.|...+..+.|||+.++.+++.. ....+
T Consensus       285 Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~  364 (563)
T KOG1024|consen  285 RVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPF  364 (563)
T ss_pred             heechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcce
Confidence            344445788999999999976643      3345555543 234455678899999999999999999998864 45667


Q ss_pred             EEEeccCCCCHHHHHhcCC-------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccccee
Q 048219          101 LVYEYMSNGSLADILFNAE-------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLW  173 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~-------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg  173 (183)
                      ..+.+..-|.|..++...+       +..+..+...++.|++.|+.|+|.+   +++|.||.++|+++|+.-.+|++|--
T Consensus       365 V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDsa  441 (563)
T KOG1024|consen  365 VLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDSA  441 (563)
T ss_pred             EEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccch
Confidence            7778787789999987321       3344556667889999999999998   99999999999999999999999988


Q ss_pred             ccc
Q 048219          174 IGK  176 (183)
Q Consensus       174 ~a~  176 (183)
                      +++
T Consensus       442 LSR  444 (563)
T KOG1024|consen  442 LSR  444 (563)
T ss_pred             hcc
Confidence            887

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.56  E-value=2.6e-14  Score=113.24  Aligned_cols=140  Identities=18%  Similarity=0.212  Sum_probs=93.9

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchhhHHH----------------------------------------HHHHH
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERE----------------------------------------REFQT   73 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~----------------------------------------~~~~~   73 (183)
                      +.+|.|++|.||+|...+|+.|++|...+......                                        -.+.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            35999999999999998999999998754211100                                        01233


Q ss_pred             HHHHHhhc----CCCceeeeeceEE-eCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHH-HHHHhhhCCCC
Q 048219           74 EIKVIGRT----HHRNLVRLLGYSL-EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIAR-GILYLHDECET  147 (183)
Q Consensus        74 e~~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~-~l~~lh~~~~~  147 (183)
                      |...+..+    ++.+-+.+...+. ..+..+++|||++|.++.+..........   ...++..++. .+..+|..   
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~---  276 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRD---  276 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhC---
Confidence            55544443    3333333333332 24456899999999998876643211122   2234444444 35667876   


Q ss_pred             CceecCCCCCCEEecCCCcccccceecccccc
Q 048219          148 QIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       148 ~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++|+|++|.||+++.++.++++|||++....
T Consensus       277 g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       277 GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            99999999999999999999999999998654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.55  E-value=1.1e-13  Score=95.57  Aligned_cols=145  Identities=17%  Similarity=0.253  Sum_probs=103.2

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchh-------hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL-------DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ..+-+|+-+.|+.+.+.....+...++.+..       .-..++..+|++.|.++.--.|.-+.-++.+.....+.|||+
T Consensus        13 ~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~   92 (229)
T KOG3087|consen   13 ELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFI   92 (229)
T ss_pred             eeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEec
Confidence            4567888888888876655444333343321       122467889999998876555555555677888889999999


Q ss_pred             CC-CCHHHHHhcCCCC-CChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC---cccccceecccccccc
Q 048219          107 SN-GSLADILFNAEKQ-PNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR---CAKNFRLWIGKVDEAR  181 (183)
Q Consensus       107 ~~-~~l~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~---~~~i~dfg~a~~~~~~  181 (183)
                      +| .++.+++...... ........++.++-..+.-||.+   .++|+||+++||++..++   .+.++|||++.+-...
T Consensus        93 ~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~~~  169 (229)
T KOG3087|consen   93 DGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSRLP  169 (229)
T ss_pred             cchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhcccCc
Confidence            87 4666776553322 22233356888999999999998   999999999999997664   3479999999875443

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.47  E-value=2.4e-13  Score=94.44  Aligned_cols=133  Identities=14%  Similarity=0.135  Sum_probs=91.7

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCce-eeeeceEEeCCeEEEEEeccCCCCHH
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL-VRLLGYSLEVSKKILVYEYMSNGSLA  112 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~~~l~  112 (183)
                      +.++.|.++.+|++... +..+++|....... .......|..++..+.+.++ ++++..  .....+++||+++|.++.
T Consensus         4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l~   79 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSELL   79 (170)
T ss_pred             eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCccc
Confidence            35788999999998755 56788888654321 12234668888887754443 344433  333457999999988765


Q ss_pred             HHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCC--CCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          113 DILFNAEKQPNWIERTGIARDIARGILYLHDEC--ETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       113 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      ..      ...   ......+++.++..+|+..  ...++|+|++|.||+++ .+.++++||+.|...+.
T Consensus        80 ~~------~~~---~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~~  139 (170)
T cd05151          80 TE------DFS---DPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMNDP  139 (170)
T ss_pred             cc------ccc---CHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCCCh
Confidence            42      011   1224578899999999862  12259999999999999 66789999999987653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.46  E-value=5.4e-14  Score=119.21  Aligned_cols=89  Identities=19%  Similarity=0.228  Sum_probs=68.0

Q ss_pred             ceeeeeceE-------EeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCC
Q 048219           85 NLVRLLGYS-------LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQ  157 (183)
Q Consensus        85 ~i~~~~~~~-------~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~  157 (183)
                      ||..+.+++       .....+++++|++ +++|.+++......+++..+..++.|++.||.|||++   +|+||||||+
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIvHrDlKP~  109 (793)
T PLN00181         34 YVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIVVHNVRPS  109 (793)
T ss_pred             HHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---CeeeccCCch
Confidence            455555554       1223466778887 5699999976555678888889999999999999998   9999999999


Q ss_pred             CEEecC-------------------CCcccccceecccc
Q 048219          158 NILMDE-------------------NRCAKNFRLWIGKV  177 (183)
Q Consensus       158 nil~~~-------------------~~~~~i~dfg~a~~  177 (183)
                      |||++.                   ++.+|++|||+|+.
T Consensus       110 NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~  148 (793)
T PLN00181        110 CFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRR  148 (793)
T ss_pred             hEEEcccCcEEEeeccccCcccccccCcccccccccccc
Confidence            999954                   44566777777653

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.43  E-value=7.5e-13  Score=106.60  Aligned_cols=136  Identities=14%  Similarity=0.112  Sum_probs=87.0

Q ss_pred             cccCcCcCceEEEEEEcC-CcEEEEEEccchhhH----------------------------------HHHH------HH
Q 048219           34 EKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDE----------------------------------RERE------FQ   72 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~----------------------------------~~~~------~~   72 (183)
                      +-+|.|++|.||+|...+ |+.|++|...+....                                  ....      +.
T Consensus       125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~  204 (537)
T PRK04750        125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM  204 (537)
T ss_pred             hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence            469999999999999877 899999998643110                                  0111      23


Q ss_pred             HHHHHHhhc----CCCceeeeeceEEe-CCeEEEEEeccCCCCHHHHHh--cCCCC---CChHHHHHHHHHHHHHHHHhh
Q 048219           73 TEIKVIGRT----HHRNLVRLLGYSLE-VSKKILVYEYMSNGSLADILF--NAEKQ---PNWIERTGIARDIARGILYLH  142 (183)
Q Consensus        73 ~e~~~l~~l----~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~l~--~~~~~---~~~~~~~~i~~~i~~~l~~lh  142 (183)
                      .|+..+.++    .+.+.+.+...+.+ .+..+++|||+.|+++.+.-.  ..+..   +.......++.|+.       
T Consensus       205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------  277 (537)
T PRK04750        205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-------  277 (537)
T ss_pred             HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------
Confidence            344433333    23344444444432 456789999999999976422  11111   11111222333332       


Q ss_pred             hCCCCCceecCCCCCCEEecCCC----cccccceecccccc
Q 048219          143 DECETQIIHCDIKPQNILMDENR----CAKNFRLWIGKVDE  179 (183)
Q Consensus       143 ~~~~~~i~H~dl~~~nil~~~~~----~~~i~dfg~a~~~~  179 (183)
                      ..   +++|+|++|.||+++.++    .++++|||++...+
T Consensus       278 ~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        278 RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            33   999999999999999887    89999999987653

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.43  E-value=1.1e-13  Score=113.18  Aligned_cols=142  Identities=19%  Similarity=0.257  Sum_probs=103.1

Q ss_pred             cccCcCcCceEEEEEEcC-CcEEEEEEcc----chh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           34 EKVGRGSSGTVYKGAMIN-RQLVAVNRLE----KVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~-~~~~~ik~~~----~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ..+|.|++|.++.+.... ......+...    ...  ......+..|..+-..+.|+|++.....+.......-.||||
T Consensus       324 ~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~  403 (601)
T KOG0590|consen  324 RVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYC  403 (601)
T ss_pred             ceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhcc
Confidence            468899999666554332 1111111111    111  111223667777778899999887766666555555559999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      ++ +|+.++... ..++...+..+++|++.|+.|+|+.   ++.|||+|++|+++..++.+||+|||.+.++..
T Consensus       404 ~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~  472 (601)
T KOG0590|consen  404 PY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRY  472 (601)
T ss_pred             cH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeecc
Confidence            99 999988653 2455666777899999999999998   999999999999999999999999999998753

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.32  E-value=4.2e-11  Score=84.86  Aligned_cols=137  Identities=13%  Similarity=0.114  Sum_probs=90.9

Q ss_pred             cccCcCcCceEEEEEEcC-------CcEEEEEEccchh------------h--------------HHHHHHHHHHHHHhh
Q 048219           34 EKVGRGSSGTVYKGAMIN-------RQLVAVNRLEKVL------------D--------------EREREFQTEIKVIGR   80 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~-------~~~~~ik~~~~~~------------~--------------~~~~~~~~e~~~l~~   80 (183)
                      ..||.|.-+.||.|....       +..+|+|......            .              ........|...|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            357889999999997542       3567777643100            0              001123478888988


Q ss_pred             cCC--CceeeeeceEEeCCeEEEEEeccCCCCHH-HHHhcCCCCCChHHHHHHHHHHHHHHHHh-hhCCCCCceecCCCC
Q 048219           81 THH--RNLVRLLGYSLEVSKKILVYEYMSNGSLA-DILFNAEKQPNWIERTGIARDIARGILYL-HDECETQIIHCDIKP  156 (183)
Q Consensus        81 l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~l~-~~l~~~~~~~~~~~~~~i~~~i~~~l~~l-h~~~~~~i~H~dl~~  156 (183)
                      +..  -+++.++.+    ...+++||++.+..+. ..+..  ..........+..+++.++..+ |..   +++|+||++
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDLs~  153 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADLSE  153 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence            853  345555543    5678999999754332 22222  1222333445678899999888 776   999999999


Q ss_pred             CCEEecCCCcccccceeccccccc
Q 048219          157 QNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       157 ~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      .||+++ ++.+.++|||.|...+.
T Consensus       154 ~NIL~~-~~~v~iIDF~qav~~~h  176 (197)
T cd05146         154 YNMLWH-DGKVWFIDVSQSVEPTH  176 (197)
T ss_pred             HHEEEE-CCcEEEEECCCceeCCC
Confidence            999997 46789999999875543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.27  E-value=7.3e-13  Score=105.49  Aligned_cols=139  Identities=21%  Similarity=0.168  Sum_probs=109.4

Q ss_pred             cCcCcCceEEEEEEc----CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEeccCC
Q 048219           36 VGRGSSGTVYKGAMI----NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        36 lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      +|+|++|.|++++..    .+..++.|.+.+...  ........|-.++...+ ||.++++...++..+..++++++..+
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg   81 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG   81 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence            689999999876532    355666666554321  11113445666777776 99999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++..+.... .+++.....+..+++.++.++|+.   +++++|+|++||+++.+|.+++.|||++++.
T Consensus        82 g~lft~l~~~~-~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~  147 (612)
T KOG0603|consen   82 GDLFTRLSKEV-MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEA  147 (612)
T ss_pred             chhhhccccCC-chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHh
Confidence            99988886543 344555556778899999999998   9999999999999999999999999999865

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.25  E-value=4.9e-11  Score=86.18  Aligned_cols=145  Identities=17%  Similarity=0.210  Sum_probs=96.5

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCC--ceeeeeceEEeC---CeEEEEEeccC
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHR--NLVRLLGYSLEV---SKKILVYEYMS  107 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~--~i~~~~~~~~~~---~~~~lv~e~~~  107 (183)
                      +.++.|..+.+|++...++..+++|....... .....+..|..++..+.+.  .+++++.+....   +..+++||+++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            35789999999998876656788888654321 1234578899999888653  355666555443   25689999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhC-------------------------------------------
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE-------------------------------------------  144 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-------------------------------------------  144 (183)
                      |.++...+..  ...+......++.+++..+..+|+.                                           
T Consensus        84 G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (223)
T cd05154          84 GRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL  161 (223)
T ss_pred             CEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence            8766553311  1223333334445555555555421                                           


Q ss_pred             ----------CCCCceecCCCCCCEEecC--CCcccccceeccccccc
Q 048219          145 ----------CETQIIHCDIKPQNILMDE--NRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       145 ----------~~~~i~H~dl~~~nil~~~--~~~~~i~dfg~a~~~~~  180 (183)
                                ....++|+|+.+.||+++.  .+.+.++||+.|..+..
T Consensus       162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~  209 (223)
T cd05154         162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDP  209 (223)
T ss_pred             HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCCh
Confidence                      1246799999999999998  56678999999987653

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.20  E-value=3.4e-11  Score=95.33  Aligned_cols=99  Identities=31%  Similarity=0.508  Sum_probs=90.6

Q ss_pred             HhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCc-eecCCCC
Q 048219           78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI-IHCDIKP  156 (183)
Q Consensus        78 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i-~H~dl~~  156 (183)
                      |+.+.|.|+.++.|.+.++...+.+.++|+.|+|.+.+......+++.....++++++.||.|+|..   +| .|+.++.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~s   77 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALKS   77 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeecc
Confidence            3567899999999999999999999999999999999988778888888888999999999999986   44 8999999


Q ss_pred             CCEEecCCCcccccceecccccc
Q 048219          157 QNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       157 ~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +|+++|....+|+.|||+..+..
T Consensus        78 ~nClvd~~w~lklt~~Gl~~~~~  100 (484)
T KOG1023|consen   78 SNCLVDSRWVLKLTDFGLNSLLE  100 (484)
T ss_pred             ccceeeeeEEEEechhhhccccc
Confidence            99999999999999999998763

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.14  E-value=3.5e-11  Score=87.86  Aligned_cols=137  Identities=24%  Similarity=0.399  Sum_probs=106.2

Q ss_pred             hhcccCcCcCceEEEEEEcCCcEEEEEEc--cchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           32 FKEKVGRGSSGTVYKGAMINRQLVAVNRL--EKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~~~~~~~ik~~--~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      +..+|.+...|..|+|++.....|+ |++  ........+.+..|...|+-++||||..+.++|..+.++.+++.|+|.+
T Consensus       194 l~tkl~e~hsgelwrgrwqgndiva-kil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~g  272 (448)
T KOG0195|consen  194 LITKLAESHSGELWRGRWQGNDIVA-KILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFG  272 (448)
T ss_pred             hhhhhccCCCcccccccccCcchhh-hhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccch
Confidence            4457888899999999987765443 333  2222333456888999999999999999999999999999999999999


Q ss_pred             CHHHHHhcCCC-CCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccc
Q 048219          110 SLADILFNAEK-QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNF  170 (183)
Q Consensus       110 ~l~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~  170 (183)
                      +|+..+..... ..+..+...++..++.|+.|||+-- .-|..-.|....+++|++-+++|.
T Consensus       273 slynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltaris  333 (448)
T KOG0195|consen  273 SLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARIS  333 (448)
T ss_pred             HHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhhee
Confidence            99999976432 2345566778999999999999852 123345688999999999887764

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.11  E-value=1.5e-10  Score=88.61  Aligned_cols=88  Identities=20%  Similarity=0.292  Sum_probs=68.9

Q ss_pred             CCCceeeeeceEEeCC---------------------------eEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHH
Q 048219           82 HHRNLVRLLGYSLEVS---------------------------KKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDI  134 (183)
Q Consensus        82 ~h~~i~~~~~~~~~~~---------------------------~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i  134 (183)
                      +||||+++.++|.+.-                           ..|+||...+ .+|-++++..  ..+......+..|+
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~--~~s~r~~~~~laQl  350 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR--HRSYRTGRVILAQL  350 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC--CCchHHHHHHHHHH
Confidence            6999999988875421                           1378887774 4888888653  44556666688999


Q ss_pred             HHHHHHhhhCCCCCceecCCCCCCEEe--cCCC--cccccceecc
Q 048219          135 ARGILYLHDECETQIIHCDIKPQNILM--DENR--CAKNFRLWIG  175 (183)
Q Consensus       135 ~~~l~~lh~~~~~~i~H~dl~~~nil~--~~~~--~~~i~dfg~a  175 (183)
                      +.|+.|||.+   ++.|||+|.+||++  |+++  .+.++|||.+
T Consensus       351 LEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc  392 (598)
T KOG4158|consen  351 LEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCC  392 (598)
T ss_pred             HHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEccccee
Confidence            9999999998   99999999999997  3333  5778999976

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.10  E-value=1.4e-09  Score=76.77  Aligned_cols=125  Identities=19%  Similarity=0.191  Sum_probs=76.0

Q ss_pred             EEEEEEcCCcEEEEEEccch--------------------------hhHHHHHHHHHHHHHhhcCCC--ceeeeeceEEe
Q 048219           44 VYKGAMINRQLVAVNRLEKV--------------------------LDEREREFQTEIKVIGRTHHR--NLVRLLGYSLE   95 (183)
Q Consensus        44 v~~~~~~~~~~~~ik~~~~~--------------------------~~~~~~~~~~e~~~l~~l~h~--~i~~~~~~~~~   95 (183)
                      ||.|...++..+++|.-...                          .......+..|.+.|..+...  ++++++.+   
T Consensus         2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~---   78 (188)
T PF01163_consen    2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY---   78 (188)
T ss_dssp             EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE---
T ss_pred             EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE---
Confidence            67777777777777764320                          001123467899999998755  45555533   


Q ss_pred             CCeEEEEEeccC--CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHH-hhhCCCCCceecCCCCCCEEecCCCcccccce
Q 048219           96 VSKKILVYEYMS--NGSLADILFNAEKQPNWIERTGIARDIARGILY-LHDECETQIIHCDIKPQNILMDENRCAKNFRL  172 (183)
Q Consensus        96 ~~~~~lv~e~~~--~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~-lh~~~~~~i~H~dl~~~nil~~~~~~~~i~df  172 (183)
                       ....++|||++  |..+..+......   ......+..+++..+.. +|..   +++|+||++.||+++++ .+.++||
T Consensus        79 -~~~~ivME~I~~~G~~~~~l~~~~~~---~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~iIDf  150 (188)
T PF01163_consen   79 -NRNVIVMEYIGEDGVPLPRLKDVDLS---PEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYIIDF  150 (188)
T ss_dssp             -ETTEEEEE--EETTEEGGCHHHCGGG---GSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE--G
T ss_pred             -eCCEEEEEecCCCccchhhHHhcccc---chhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEEEec
Confidence             24569999998  6555544322101   12233455666664444 5676   99999999999999987 8999999


Q ss_pred             ecccccc
Q 048219          173 WIGKVDE  179 (183)
Q Consensus       173 g~a~~~~  179 (183)
                      |.|.-..
T Consensus       151 ~qav~~~  157 (188)
T PF01163_consen  151 GQAVDSS  157 (188)
T ss_dssp             TTEEETT
T ss_pred             CcceecC
Confidence            9887543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.99  E-value=2.1e-08  Score=74.68  Aligned_cols=132  Identities=13%  Similarity=0.061  Sum_probs=88.5

Q ss_pred             eEEEEEEcCCcEEEEEEccchhh-HHH----------HHHHHHHHHHhhcCCCcee--eeeceEEe-----CCeEEEEEe
Q 048219           43 TVYKGAMINRQLVAVNRLEKVLD-ERE----------REFQTEIKVIGRTHHRNLV--RLLGYSLE-----VSKKILVYE  104 (183)
Q Consensus        43 ~v~~~~~~~~~~~~ik~~~~~~~-~~~----------~~~~~e~~~l~~l~h~~i~--~~~~~~~~-----~~~~~lv~e  104 (183)
                      .|.+.. .+++.+.+|......- +..          ..+.+|...+.++...+|.  .+..+.+.     ....+++||
T Consensus        37 rvvr~~-~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte  115 (268)
T PRK15123         37 RTLRFE-LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE  115 (268)
T ss_pred             eEEEEE-ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence            344443 3566788886533210 001          1366788888777443333  33444432     234789999


Q ss_pred             ccCCC-CHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC-------CCcccccceecc
Q 048219          105 YMSNG-SLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE-------NRCAKNFRLWIG  175 (183)
Q Consensus       105 ~~~~~-~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~-------~~~~~i~dfg~a  175 (183)
                      ++++. ++.+++... ...........++.+++..+.-||++   +++|+|++++||+++.       ...+.++||+.+
T Consensus       116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~  192 (268)
T PRK15123        116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRA  192 (268)
T ss_pred             eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceEEEEECCcc
Confidence            99876 788877431 12233445557889999999999998   9999999999999985       357899999998


Q ss_pred             ccc
Q 048219          176 KVD  178 (183)
Q Consensus       176 ~~~  178 (183)
                      ++.
T Consensus       193 ~~~  195 (268)
T PRK15123        193 QIR  195 (268)
T ss_pred             ccc
Confidence            653

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.99  E-value=2.7e-09  Score=79.68  Aligned_cols=143  Identities=17%  Similarity=0.179  Sum_probs=83.3

Q ss_pred             hcccCcCcCceEEEEEEcC-CcEEEEEEccch---hhHHHHHHHHHHHHHhhcCC----------CceeeeeceE-----
Q 048219           33 KEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKV---LDEREREFQTEIKVIGRTHH----------RNLVRLLGYS-----   93 (183)
Q Consensus        33 ~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h----------~~i~~~~~~~-----   93 (183)
                      ...||.|.++.||.+.+.+ ++.+++|...-.   .....+.+.+|.-....+.+          -.++-.++..     
T Consensus        17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~   96 (288)
T PF14531_consen   17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK   96 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred             ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence            3579999999999999875 778888875421   11123344444433322211          1122112211     


Q ss_pred             ----EeCC--------eEEEEEeccCCCCHHHHHhc---CCCC---CChHHHHHHHHHHHHHHHHhhhCCCCCceecCCC
Q 048219           94 ----LEVS--------KKILVYEYMSNGSLADILFN---AEKQ---PNWIERTGIARDIARGILYLHDECETQIIHCDIK  155 (183)
Q Consensus        94 ----~~~~--------~~~lv~e~~~~~~l~~~l~~---~~~~---~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~  155 (183)
                          ....        +.+++|+-+ .++|.+++..   ....   ........+..|+.+.+.++|..   +++|+|++
T Consensus        97 ~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi~  172 (288)
T PF14531_consen   97 PPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDIK  172 (288)
T ss_dssp             -SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-S
T ss_pred             CcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecccc
Confidence                1111        235667766 4588877642   1111   12233344568899999999998   99999999


Q ss_pred             CCCEEecCCCcccccceecccccc
Q 048219          156 PQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       156 ~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |+|++++.+|.+.+.||+...-..
T Consensus       173 ~~nfll~~~G~v~Lg~F~~~~r~g  196 (288)
T PF14531_consen  173 PENFLLDQDGGVFLGDFSSLVRAG  196 (288)
T ss_dssp             GGGEEE-TTS-EEE--GGGEEETT
T ss_pred             eeeEEEcCCCCEEEcChHHHeecC
Confidence            999999999999999998766443

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.94  E-value=1.4e-10  Score=98.00  Aligned_cols=139  Identities=20%  Similarity=0.109  Sum_probs=100.9

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchh-hHHH---HHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVL-DERE---REFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~-~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      ..+.+.||++.|=.+.+|.+.+|. +.+|.+.+.. ....   .+.+.|+. ....++||.+.+.-+.......|+|=+|
T Consensus        25 ~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   25 CHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             eeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            445678999999999999988886 7777765433 2222   23344444 4455799998876665555556666677


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIG  175 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a  175 (183)
                      . ..+|++.+..++ .+......-|+.|++.|+.-+|..   +|+|+|||.+|||+..++=+-|.||-.=
T Consensus       103 v-khnLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsF  167 (1431)
T KOG1240|consen  103 V-KHNLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASF  167 (1431)
T ss_pred             H-hhhhhhhhccch-HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhccccc
Confidence            7 458999886543 223333344789999999999997   9999999999999999998999998543

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.93  E-value=8.2e-09  Score=83.55  Aligned_cols=120  Identities=18%  Similarity=0.134  Sum_probs=93.9

Q ss_pred             EcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHH
Q 048219           49 MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT  128 (183)
Q Consensus        49 ~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~  128 (183)
                      ...+..+.+...+...........+.+..|+.++||+|++++..++..+..|+|+|.+.  .+...+....    .....
T Consensus        34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~----~~~v~  107 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG----KEEVC  107 (690)
T ss_pred             eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH----HHHHH
Confidence            33466676666554433334456667888999999999999999999999999999883  6777775532    33334


Q ss_pred             HHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219          129 GIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus       129 ~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      ..+.||+.||.|||+.  +.++|+++.-+.+++++.|.-||.+|-.+.
T Consensus       108 ~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~  153 (690)
T KOG1243|consen  108 LGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVS  153 (690)
T ss_pred             HHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEe
Confidence            4578999999999975  499999999999999999999999988774

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.93  E-value=1.2e-08  Score=74.93  Aligned_cols=135  Identities=19%  Similarity=0.170  Sum_probs=92.7

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchh----------------------hHHHHHHHHHHHHHhhcCCC--c
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVL----------------------DEREREFQTEIKVIGRTHHR--N   85 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~----------------------~~~~~~~~~e~~~l~~l~h~--~   85 (183)
                      +.+.+.||-|.-+.||.|....+..+++|.=.-..                      ......+.+|.+.|.++...  .
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            44557899999999999999888888887532110                      11123467899999988644  5


Q ss_pred             eeeeeceEEeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC
Q 048219           86 LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR  165 (183)
Q Consensus        86 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~  165 (183)
                      +++++++    +...++||++.|..|...--   ...+...   +...|+.-+.-....   |++|+|+++=||+++++|
T Consensus       173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~---~~en~~~---il~~il~~~~~~~~~---GiVHGDlSefNIlV~~dg  239 (304)
T COG0478         173 VPKPIAW----NRHAVVMEYIEGVELYRLRL---DVENPDE---ILDKILEEVRKAYRR---GIVHGDLSEFNILVTEDG  239 (304)
T ss_pred             CCCcccc----ccceeeeehcccceeecccC---cccCHHH---HHHHHHHHHHHHHHc---CccccCCchheEEEecCC
Confidence            6665543    67789999999876654321   1122222   334444444444343   999999999999999999


Q ss_pred             cccccceecccc
Q 048219          166 CAKNFRLWIGKV  177 (183)
Q Consensus       166 ~~~i~dfg~a~~  177 (183)
                      .+.++||=-+.-
T Consensus       240 ~~~vIDwPQ~v~  251 (304)
T COG0478         240 DIVVIDWPQAVP  251 (304)
T ss_pred             CEEEEeCccccc
Confidence            999999966553

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.91  E-value=1e-08  Score=73.68  Aligned_cols=107  Identities=24%  Similarity=0.281  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHhhcCCCc--eeeeeceEEeCC----eEEEEEeccCCC-CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHh
Q 048219           69 REFQTEIKVIGRTHHRN--LVRLLGYSLEVS----KKILVYEYMSNG-SLADILFNAEKQPNWIERTGIARDIARGILYL  141 (183)
Q Consensus        69 ~~~~~e~~~l~~l~h~~--i~~~~~~~~~~~----~~~lv~e~~~~~-~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~l  141 (183)
                      .+...|...+..+....  .+++.++.+...    ..++++|.+++. +|.+++..... .+......++.+++..+.-|
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~l  134 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAKL  134 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHHH
Confidence            34667777776664333  444555554322    458999999874 78888755222 34445567889999999999


Q ss_pred             hhCCCCCceecCCCCCCEEecCCC---cccccceecccccc
Q 048219          142 HDECETQIIHCDIKPQNILMDENR---CAKNFRLWIGKVDE  179 (183)
Q Consensus       142 h~~~~~~i~H~dl~~~nil~~~~~---~~~i~dfg~a~~~~  179 (183)
                      |++   +++|+|+++.|||++..+   .+.++||+-+++..
T Consensus       135 H~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  135 HDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             HHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            998   999999999999999887   78899999988754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.90  E-value=1.9e-10  Score=94.40  Aligned_cols=147  Identities=20%  Similarity=0.271  Sum_probs=110.7

Q ss_pred             hchhcccCcCcCceEEEEEEc--CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI--NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      +.+...+|+|+|+.+......  ....++.+.+....  .....++..|..+-..+. |.|++...+........+++++
T Consensus        22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~  101 (601)
T KOG0590|consen   22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLS  101 (601)
T ss_pred             ccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccC
Confidence            445567899999987766532  23445555544332  223344556777777776 9999999999999999999999


Q ss_pred             ccCCCCHHHHH-hcCCCCCChHHHHHHHHHHHHHHHHhh-hCCCCCceecCCCCCCEEecCCC-cccccceecccccc
Q 048219          105 YMSNGSLADIL-FNAEKQPNWIERTGIARDIARGILYLH-DECETQIIHCDIKPQNILMDENR-CAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l-~~~~~~~~~~~~~~i~~~i~~~l~~lh-~~~~~~i~H~dl~~~nil~~~~~-~~~i~dfg~a~~~~  179 (183)
                      +..+++++..+ ............-.+..|+..++.|+| ..   ++.|+|++|+|.+++..+ ..++.|||+|..+.
T Consensus       102 ~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~  176 (601)
T KOG0590|consen  102 YSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAYR  176 (601)
T ss_pred             cccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhcccc
Confidence            99999998877 333213334445557899999999999 66   999999999999999999 99999999998653

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.89  E-value=3.5e-08  Score=79.52  Aligned_cols=141  Identities=17%  Similarity=0.146  Sum_probs=89.2

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchhhHHH----------------------------------HH------HHH
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERE----------------------------------RE------FQT   73 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~----------------------------------~~------~~~   73 (183)
                      +-++.++-|.||+|...+|+.|++|...+......                                  +.      +..
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            35788999999999999999999998754221110                                  01      233


Q ss_pred             HHHHHhhc----CCCceeeeeceE-EeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCC
Q 048219           74 EIKVIGRT----HHRNLVRLLGYS-LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ  148 (183)
Q Consensus        74 e~~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~  148 (183)
                      |...+..+    +...-+.+...| ...+.-.++|||++|-.+.+.........+...+.....+..--..+ + .   +
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~-~-d---g  285 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLL-R-D---G  285 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHH-h-c---C
Confidence            44444433    222233333333 44667789999999988877643332333333322222221111112 2 2   9


Q ss_pred             ceecCCCCCCEEecCCCcccccceecccccc
Q 048219          149 IIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       149 i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++|.|.+|.||+++.++.+.+.|||+....+
T Consensus       286 ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~  316 (517)
T COG0661         286 FFHADPHPGNILVRSDGRIVLLDFGIVGRLD  316 (517)
T ss_pred             ccccCCCccceEEecCCcEEEEcCcceecCC
Confidence            9999999999999999999999999987554

>PRK09902 hypothetical protein; Provisional

Probab=98.75  E-value=3.2e-07  Score=65.61  Aligned_cols=137  Identities=17%  Similarity=0.104  Sum_probs=93.1

Q ss_pred             cCcCcCceEEEEEEcCCcEEEEEEccchh------hHHHHHHHHHHHHHhhcCCCc--eeeeeceEE-eC----CeEEEE
Q 048219           36 VGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEIKVIGRTHHRN--LVRLLGYSL-EV----SKKILV  102 (183)
Q Consensus        36 lg~g~~g~v~~~~~~~~~~~~ik~~~~~~------~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~-~~----~~~~lv  102 (183)
                      -++|+.+.|+.... +++.+-+|+-.+-.      +--...+.+|...+..+...+  ++++. ++. ..    -..+||
T Consensus        26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV  103 (216)
T PRK09902         26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV  103 (216)
T ss_pred             cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence            35588888887543 33367777765211      112346888999888875333  44444 222 11    136799


Q ss_pred             EeccCC-CCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc--ccccceecccc
Q 048219          103 YEYMSN-GSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC--AKNFRLWIGKV  177 (183)
Q Consensus       103 ~e~~~~-~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~--~~i~dfg~a~~  177 (183)
                      +|-+++ -+|.+++.... ...+......+..+++..+.-||+.   ++.|+|+.+.||+++..+.  +.++||--++.
T Consensus       104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            997753 58887774432 2334444557889999999999998   9999999999999986666  89999987763

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.74  E-value=2.4e-07  Score=67.51  Aligned_cols=142  Identities=10%  Similarity=0.120  Sum_probs=82.6

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCc--eeeeeceEEeCCeEEEEEeccCCCC-
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN--LVRLLGYSLEVSKKILVYEYMSNGS-  110 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~-  110 (183)
                      ..+++|..+.+|+..   +..+.+|......  ....+.+|.++++.+....  +++++.+....+...++||+++|.+ 
T Consensus         7 ~~i~~G~t~~~y~~~---~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~   81 (226)
T TIGR02172         7 TQTGEGGNGESYTHK---TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS   81 (226)
T ss_pred             eeecCCCCcceeEec---CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence            468999999999732   3345566654322  2344677888888775333  4566666666777789999998863 


Q ss_pred             HHHHH--------------hc-----CC---CCCChHHH-HHHHHH----------HHH-HHHHhhhC-CCCCceecCCC
Q 048219          111 LADIL--------------FN-----AE---KQPNWIER-TGIARD----------IAR-GILYLHDE-CETQIIHCDIK  155 (183)
Q Consensus       111 l~~~l--------------~~-----~~---~~~~~~~~-~~i~~~----------i~~-~l~~lh~~-~~~~i~H~dl~  155 (183)
                      +...+              ..     ..   ........ ..+..+          +.. ...++... ....++|+|+.
T Consensus        82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~  161 (226)
T TIGR02172        82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ  161 (226)
T ss_pred             hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence            11111              10     00   00010100 001000          001 11222111 12356899999


Q ss_pred             CCCEEecCCCcccccceecccccccc
Q 048219          156 PQNILMDENRCAKNFRLWIGKVDEAR  181 (183)
Q Consensus       156 ~~nil~~~~~~~~i~dfg~a~~~~~~  181 (183)
                      |.|+++++++ +.++||+.|..++..
T Consensus       162 ~~Nii~~~~~-~~iIDwe~a~~Gdp~  186 (226)
T TIGR02172       162 IGNLITSGKG-TYWIDLGDFGYGNPL  186 (226)
T ss_pred             CCcEEEcCCC-cEEEechhcCcCCHH
Confidence            9999999888 899999999887653

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.63  E-value=9.7e-08  Score=66.51  Aligned_cols=60  Identities=27%  Similarity=0.106  Sum_probs=52.2

Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |+|.+++......+++..+..++.|++.||.|+|++   +      ||+||+++.++.+++  ||++++..
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~   60 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKT   60 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeec
Confidence            578888876556688999999999999999999987   4      999999999999998  99998653

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.60  E-value=6.2e-07  Score=72.36  Aligned_cols=141  Identities=17%  Similarity=0.125  Sum_probs=86.5

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchhhHH-------------------------------HHH------HHHHHH
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDER-------------------------------ERE------FQTEIK   76 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~-------------------------------~~~------~~~e~~   76 (183)
                      +-|+.-+.+.|++|+.++|..|++|.-.+.....                               .+.      +..|++
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~  246 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK  246 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence            4688899999999999999999999765422111                               011      222333


Q ss_pred             HHh----hcCCCc---eeeeeceEE-eCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCC
Q 048219           77 VIG----RTHHRN---LVRLLGYSL-EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ  148 (183)
Q Consensus        77 ~l~----~l~h~~---i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~  148 (183)
                      ...    .+.|-+   -+.+..++. -...-.++|||++|..+.+.-.-.....+...+..-..+...-+-+.|     |
T Consensus       247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~-----G  321 (538)
T KOG1235|consen  247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKT-----G  321 (538)
T ss_pred             hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhc-----C
Confidence            332    234444   222333443 234567999999998666544322233344443333333222222333     8


Q ss_pred             ceecCCCCCCEEecC----CCcccccceecccccc
Q 048219          149 IIHCDIKPQNILMDE----NRCAKNFRLWIGKVDE  179 (183)
Q Consensus       149 i~H~dl~~~nil~~~----~~~~~i~dfg~a~~~~  179 (183)
                      ++|.|..|.||++..    +..+.+.|||+.....
T Consensus       322 ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  322 FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             CccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence            999999999999984    5678899999988654

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.51  E-value=9.1e-08  Score=76.46  Aligned_cols=154  Identities=18%  Similarity=0.120  Sum_probs=114.1

Q ss_pred             CHHHHHHHHhchhcccCc--CcCceEEEEEE--c-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhc-CCCceeeeece
Q 048219           21 SYAELKKITDGFKEKVGR--GSSGTVYKGAM--I-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRT-HHRNLVRLLGY   92 (183)
Q Consensus        21 ~~~~~~~~~~~~~~~lg~--g~~g~v~~~~~--~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~   92 (183)
                      ...++......+.+.+|.  |.+|.+|.+.-  . ....+++|.-+...  +....+=.+|+.-...+ .|.+.++.+..
T Consensus       107 ~~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~  186 (524)
T KOG0601|consen  107 PFDSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA  186 (524)
T ss_pred             CccchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc
Confidence            445556666777788999  99999998875  3 35566666633221  12222234455555566 48899998888


Q ss_pred             EEeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHH----HHHHhhhCCCCCceecCCCCCCEEecCC-Ccc
Q 048219           93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIAR----GILYLHDECETQIIHCDIKPQNILMDEN-RCA  167 (183)
Q Consensus        93 ~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~----~l~~lh~~~~~~i~H~dl~~~nil~~~~-~~~  167 (183)
                      +...+..++-+|.+ +.++.++.......+..........+...    |+.++|..   .++|.|++|.||+...+ ...
T Consensus       187 ~e~~~~lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~  262 (524)
T KOG0601|consen  187 WEGSGILFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSC  262 (524)
T ss_pred             cccCCcceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheeccccccee
Confidence            89999999999988 56888877665555566666667777777    99999998   99999999999999988 889


Q ss_pred             cccceeccccc
Q 048219          168 KNFRLWIGKVD  178 (183)
Q Consensus       168 ~i~dfg~a~~~  178 (183)
                      ++.|||+....
T Consensus       263 ~~~df~~v~~i  273 (524)
T KOG0601|consen  263 KLTDFGLVSKI  273 (524)
T ss_pred             ecCCcceeEEc
Confidence            99999987754

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.50  E-value=1.1e-07  Score=76.01  Aligned_cols=142  Identities=18%  Similarity=0.161  Sum_probs=102.7

Q ss_pred             chhcccCcCcCceEEEEEEc--CCcEEEEEEccchhhHHHHH--HHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEec
Q 048219           31 GFKEKVGRGSSGTVYKGAMI--NRQLVAVNRLEKVLDERERE--FQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~--~~~~~~ik~~~~~~~~~~~~--~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      ++...||.|.|+.++.+..+  ++..+++|-+.+.......+  -+.|+-+...+ .|.+.+++...|....+.++-.|+
T Consensus       268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~  347 (524)
T KOG0601|consen  268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEF  347 (524)
T ss_pred             ceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhh
Confidence            34457899999988886643  45677777766544332222  23445545444 488888888888777777788899


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC-Ccccccceeccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN-RCAKNFRLWIGK  176 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~-~~~~i~dfg~a~  176 (183)
                      |.+++....... ..-+.+...+.+..|++.++.++|+.   .++|.|++|+||++..+ +..++.|||.+.
T Consensus       348 ~~~~s~~l~~~~-~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  348 CEGGSSSLRSVT-SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWT  415 (524)
T ss_pred             hcCcchhhhhHH-HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccccc
Confidence            988877665522 12234445566788999999999987   99999999999999875 778899999885

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.50  E-value=1.8e-06  Score=63.54  Aligned_cols=141  Identities=16%  Similarity=0.075  Sum_probs=80.8

Q ss_pred             cCcCcC-ceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEeccCCCCHHH
Q 048219           36 VGRGSS-GTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYMSNGSLAD  113 (183)
Q Consensus        36 lg~g~~-g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~  113 (183)
                      |..|.. ..||+.... +..+.+|......   ...+..|+.+++.+. +.-+++++.+....+..+++||+++|.++..
T Consensus         6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~   81 (244)
T cd05150           6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA   81 (244)
T ss_pred             cCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence            444554 568887543 3456667654331   234556888877774 3345566666665567889999999877654


Q ss_pred             HHh-------------------cCCC---CCChH--HHHHHHHH--------------------HHHHHHHhhhC----C
Q 048219          114 ILF-------------------NAEK---QPNWI--ERTGIARD--------------------IARGILYLHDE----C  145 (183)
Q Consensus       114 ~l~-------------------~~~~---~~~~~--~~~~i~~~--------------------i~~~l~~lh~~----~  145 (183)
                      ...                   ....   .....  ....-...                    ....+..+-..    .
T Consensus        82 ~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (244)
T cd05150          82 LWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEE  161 (244)
T ss_pred             hhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcC
Confidence            320                   0000   00000  00000000                    11111222111    1


Q ss_pred             CCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          146 ETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       146 ~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      ...++|+|+.|.|++++.++...|+||+.|.+++.
T Consensus       162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp  196 (244)
T cd05150         162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADR  196 (244)
T ss_pred             ceEEECCCCCCccEEEeCCcEEEEEEccccccccH
Confidence            23589999999999999977788999999988764

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.48  E-value=1.4e-07  Score=80.11  Aligned_cols=106  Identities=25%  Similarity=0.319  Sum_probs=69.6

Q ss_pred             hcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           33 KEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        33 ~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      .+.+..|++|.||..+++. .+..+.|. .+.     ..+++.  ++....+|+++                     |+.
T Consensus        88 IklisngAygavylvrh~~trqrfa~ki-Nkq-----~lilRn--ilt~a~npfvv---------------------gDc  138 (1205)
T KOG0606|consen   88 IKLISNGAYGAVYLVRHKETRQRFAMKI-NKQ-----NLILRN--ILTFAGNPFVV---------------------GDC  138 (1205)
T ss_pred             eEeeccCCCCceeeeeccccccchhhcc-ccc-----chhhhc--cccccCCccee---------------------chh
Confidence            3578899999999998764 45566633 221     011111  22222333333                     344


Q ss_pred             HHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          112 ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       112 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ...+..-+...         .+++.+++|+|.-   +|+|+|+||+|.++..-|.+|+.|||+++.+-
T Consensus       139 ~tllk~~g~lP---------vdmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GL  194 (1205)
T KOG0606|consen  139 ATLLKNIGPLP---------VDMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGL  194 (1205)
T ss_pred             hhhcccCCCCc---------chhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhh
Confidence            44443322221         1226789999997   99999999999999999999999999999764

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.44  E-value=2.1e-06  Score=68.39  Aligned_cols=133  Identities=17%  Similarity=0.179  Sum_probs=98.5

Q ss_pred             eEEEEEE-cCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEe----CCeEEEEEeccCC-CCHHHHHh
Q 048219           43 TVYKGAM-INRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE----VSKKILVYEYMSN-GSLADILF  116 (183)
Q Consensus        43 ~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~-~~l~~~l~  116 (183)
                      +-|++.. .+|..+.+|++.............-.+.++++.|+|++++.++|..    ...+++|++|.|+ ++|.+.-.
T Consensus       291 Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F  370 (655)
T KOG3741|consen  291 TTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYF  370 (655)
T ss_pred             eeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHc
Confidence            4577764 4678889999843322222233445778899999999999999873    4568899999985 46666543


Q ss_pred             cC--------------CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          117 NA--------------EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       117 ~~--------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ..              +...++..++.++.|+..||.++|+.   |+..+-|.+.+|++.....++|..-|+..+.
T Consensus       371 ~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl  443 (655)
T KOG3741|consen  371 ANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL  443 (655)
T ss_pred             cCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence            21              12234567777899999999999998   8888999999999998888888877776654

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.40  E-value=5.9e-06  Score=59.89  Aligned_cols=143  Identities=16%  Similarity=0.173  Sum_probs=79.4

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCC--ceeeeeceEE---eCCeEEEEEeccCC
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHR--NLVRLLGYSL---EVSKKILVYEYMSN  108 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~--~i~~~~~~~~---~~~~~~lv~e~~~~  108 (183)
                      +.++.|..+.+|.....+ ..+.+|.....  .....+..|..++..+...  .+++++....   .....+++|++++|
T Consensus         3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g   79 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG   79 (239)
T ss_dssp             EEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred             ccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence            357888899999988777 47888886544  3445677888888777432  2455555332   23356899999998


Q ss_pred             CCHHH----------------HHh---cC--C-CCCChHHH--HH-------H------------HHHHHH-HHHHhhh-
Q 048219          109 GSLAD----------------ILF---NA--E-KQPNWIER--TG-------I------------ARDIAR-GILYLHD-  143 (183)
Q Consensus       109 ~~l~~----------------~l~---~~--~-~~~~~~~~--~~-------i------------~~~i~~-~l~~lh~-  143 (183)
                      .++..                .+.   ..  . ........  ..       .            ...+.. .+..+.+ 
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (239)
T PF01636_consen   80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL  159 (239)
T ss_dssp             EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence            77766                111   11  0 00111000  00       0            001111 2223322 


Q ss_pred             ---CCCCCceecCCCCCCEEec-CCCcccccceecccccc
Q 048219          144 ---ECETQIIHCDIKPQNILMD-ENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       144 ---~~~~~i~H~dl~~~nil~~-~~~~~~i~dfg~a~~~~  179 (183)
                         .....++|+|+.+.||+++ +++.+-++||+.+..+.
T Consensus       160 ~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~  199 (239)
T PF01636_consen  160 LPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGD  199 (239)
T ss_dssp             HHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEE
T ss_pred             hccCCCcEEEEeccccccceeeeccceeEEEecccceECC
Confidence               1234689999999999999 45555799999987664

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.35  E-value=7.7e-06  Score=59.72  Aligned_cols=136  Identities=18%  Similarity=0.217  Sum_probs=86.5

Q ss_pred             ccCcCcCceEEEEEEcCCcEEEEEEccchhhHHH------------------------HHHHHHHHHHhhcCC--Cceee
Q 048219           35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERE------------------------REFQTEIKVIGRTHH--RNLVR   88 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~------------------------~~~~~e~~~l~~l~h--~~i~~   88 (183)
                      .|++|.-..||+|....+..+++|+.........                        .....|...|.++..  -.+++
T Consensus        55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~  134 (268)
T COG1718          55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE  134 (268)
T ss_pred             eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence            4566777789999887788888888754221110                        113446666666643  33444


Q ss_pred             eeceEEeCCeEEEEEeccCCC-CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcc
Q 048219           89 LLGYSLEVSKKILVYEYMSNG-SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCA  167 (183)
Q Consensus        89 ~~~~~~~~~~~~lv~e~~~~~-~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~  167 (183)
                      .+.+.    +..++||++... ...-.+...  .........+..++++.+.-|...  .++||+||+.=|||+. .+.+
T Consensus       135 Pi~~~----~nVLvMEfIg~~g~pAP~LkDv--~~e~~e~~~~~~~~v~~~~~l~~~--a~LVHgDLSEyNiL~~-~~~p  205 (268)
T COG1718         135 PIAFR----NNVLVMEFIGDDGLPAPRLKDV--PLELEEAEGLYEDVVEYMRRLYKE--AGLVHGDLSEYNILVH-DGEP  205 (268)
T ss_pred             ceeec----CCeEEEEeccCCCCCCCCcccC--CcCchhHHHHHHHHHHHHHHHHHh--cCcccccchhhheEEE-CCeE
Confidence            44432    456899998542 122222221  122223445567778888777762  2999999999999999 8889


Q ss_pred             cccceecccccc
Q 048219          168 KNFRLWIGKVDE  179 (183)
Q Consensus       168 ~i~dfg~a~~~~  179 (183)
                      .|+|||-|...+
T Consensus       206 ~iID~~QaV~~~  217 (268)
T COG1718         206 YIIDVSQAVTID  217 (268)
T ss_pred             EEEECccccccC
Confidence            999999987654

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.31  E-value=4.9e-06  Score=59.88  Aligned_cols=68  Identities=26%  Similarity=0.319  Sum_probs=51.6

Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219           97 SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus        97 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      ...+++|||++|..+.+...     .++    .+...+.+++.-+|+.   |+.|+|+.|.|+++..++ ++++||+..+
T Consensus       116 ~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~~-i~iID~~~k~  182 (229)
T PF06176_consen  116 SSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNNG-IRIIDTQGKR  182 (229)
T ss_pred             eEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECCc-EEEEECcccc
Confidence            34568999999987765431     111    2345667788999998   999999999999998554 8999998776


Q ss_pred             c
Q 048219          177 V  177 (183)
Q Consensus       177 ~  177 (183)
                      -
T Consensus       183 ~  183 (229)
T PF06176_consen  183 M  183 (229)
T ss_pred             c
Confidence            4

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.29  E-value=1.1e-06  Score=66.40  Aligned_cols=93  Identities=27%  Similarity=0.337  Sum_probs=74.3

Q ss_pred             HHhhcCCCceeeeeceEEe-----CCeEEEEEeccCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCCCC
Q 048219           77 VIGRTHHRNLVRLLGYSLE-----VSKKILVYEYMSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDECETQ  148 (183)
Q Consensus        77 ~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~  148 (183)
                      .+.++-|.||++.+.+|-+     .....+++||+..+++.+++.+   ....+.......++.||+.||.|||+- -.+
T Consensus       120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Pp  198 (458)
T KOG1266|consen  120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPP  198 (458)
T ss_pred             HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCc
Confidence            3445568899999888754     3357889999999999999964   234456667778999999999999984 568


Q ss_pred             ceecCCCCCCEEecCCCccccc
Q 048219          149 IIHCDIKPQNILMDENRCAKNF  170 (183)
Q Consensus       149 i~H~dl~~~nil~~~~~~~~i~  170 (183)
                      |+|+++.-+.|++..++-+|+.
T Consensus       199 iihgnlTc~tifiq~ngLIkig  220 (458)
T KOG1266|consen  199 IIHGNLTCDTIFIQHNGLIKIG  220 (458)
T ss_pred             cccCCcchhheeecCCceEEec
Confidence            9999999999999987777754

>PLN02876 acyl-CoA dehydrogenase

Probab=98.22  E-value=2.5e-05  Score=67.12  Aligned_cols=148  Identities=14%  Similarity=0.241  Sum_probs=86.0

Q ss_pred             cccCcCcCceEEEEEEcCC---cEEEEEEccchh-hHHHHHHHHHHHHHhhcC-CCce--eeeeceEEeC---CeEEEEE
Q 048219           34 EKVGRGSSGTVYKGAMINR---QLVAVNRLEKVL-DEREREFQTEIKVIGRTH-HRNL--VRLLGYSLEV---SKKILVY  103 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~---~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i--~~~~~~~~~~---~~~~lv~  103 (183)
                      +.++.|.++.+|......+   ..+.+|+..... ......+.+|..+++.+. |.++  ++++.++.+.   +..|+||
T Consensus        44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVM  123 (822)
T PLN02876         44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIM  123 (822)
T ss_pred             EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEE
Confidence            4577888888888765443   345666543211 112345778999999885 5654  6666666543   4678999


Q ss_pred             eccCCCCHHH--------------------HHh---cCC-C---------CCCh--HHHHHHHH---------------H
Q 048219          104 EYMSNGSLAD--------------------ILF---NAE-K---------QPNW--IERTGIAR---------------D  133 (183)
Q Consensus       104 e~~~~~~l~~--------------------~l~---~~~-~---------~~~~--~~~~~i~~---------------~  133 (183)
                      |+++|..+.+                    .+.   ... .         ...+  .....+..               .
T Consensus       124 E~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~  203 (822)
T PLN02876        124 EYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNPK  203 (822)
T ss_pred             EecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCChh
Confidence            9998753211                    111   100 0         0000  01111111               1


Q ss_pred             HHHHHHHhhhCCC--------CCceecCCCCCCEEecCC-C-cccccceecccccccc
Q 048219          134 IARGILYLHDECE--------TQIIHCDIKPQNILMDEN-R-CAKNFRLWIGKVDEAR  181 (183)
Q Consensus       134 i~~~l~~lh~~~~--------~~i~H~dl~~~nil~~~~-~-~~~i~dfg~a~~~~~~  181 (183)
                      +...+.|+..+.+        ..++|+|+++.|++++.. . ..-++||.+|.+++..
T Consensus       204 ~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~GdPl  261 (822)
T PLN02876        204 MLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQM  261 (822)
T ss_pred             HHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCChH
Confidence            2233556644322        259999999999999853 3 3578999999988654

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.17  E-value=7.7e-05  Score=53.22  Aligned_cols=133  Identities=17%  Similarity=0.215  Sum_probs=83.5

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchh----------------hHHHHHHHHHHHHHhhcC------CCceeeeec
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL----------------DEREREFQTEIKVIGRTH------HRNLVRLLG   91 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~----------------~~~~~~~~~e~~~l~~l~------h~~i~~~~~   91 (183)
                      ..||+|+.-.||.--...  ...+|......                ........+|+.....+.      +..|.+++|
T Consensus         7 ~~i~~G~~R~cy~HP~dp--~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G   84 (199)
T PF10707_consen    7 DLIAQGGERDCYQHPDDP--NLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG   84 (199)
T ss_pred             cccccCCCceEEECCCCC--CeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence            368999999898643323  33444443322                011234556666555544      778999999


Q ss_pred             eEEeCCeEEEEEeccC------CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC
Q 048219           92 YSLEVSKKILVYEYMS------NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR  165 (183)
Q Consensus        92 ~~~~~~~~~lv~e~~~------~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~  165 (183)
                      +.++.-...+|+|.+.      ..+|.+++...  .++. .   +...+-.-..++-++   .|+.+|++|.||++....
T Consensus        85 ~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~--~~~~-~---~~~~L~~f~~~l~~~---~Iv~~dl~~~NIv~~~~~  155 (199)
T PF10707_consen   85 FVETNLGLGLVVELIRDADGNISPTLEDYLKEG--GLTE-E---LRQALDEFKRYLLDH---HIVIRDLNPHNIVVQRRD  155 (199)
T ss_pred             EEecCCceEEEEEEEECCCCCcCccHHHHHHcC--CccH-H---HHHHHHHHHHHHHHc---CCeecCCCcccEEEEecC
Confidence            9999888999998763      34777777443  2333 2   222333344667766   899999999999997542


Q ss_pred             ----cccccc-eecccc
Q 048219          166 ----CAKNFR-LWIGKV  177 (183)
Q Consensus       166 ----~~~i~d-fg~a~~  177 (183)
                          .+.++| ||-..+
T Consensus       156 ~~~~~lvlIDG~G~~~~  172 (199)
T PF10707_consen  156 SGEFRLVLIDGLGEKEL  172 (199)
T ss_pred             CCceEEEEEeCCCCccc
Confidence                355554 555444

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.12  E-value=1.2e-05  Score=57.01  Aligned_cols=102  Identities=25%  Similarity=0.283  Sum_probs=77.1

Q ss_pred             HHHHHHhhcCC-CceeeeeceEEeCCeEEEEEeccCCCCHHHH---HhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCC
Q 048219           73 TEIKVIGRTHH-RNLVRLLGYSLEVSKKILVYEYMSNGSLADI---LFNAEKQPNWIERTGIARDIARGILYLHDECETQ  148 (183)
Q Consensus        73 ~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~---l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~  148 (183)
                      +|..+++.+++ +++++++|+|    .-++++|+...+++...   +.. -....|..+..++.+++..+.+++......
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l~~-~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPLSQ-FLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCcccccccccccc-ccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            46777888875 5889999988    33568899876655321   101 123568899999999999999998744446


Q ss_pred             ceecCCCCCCEEecCCCcccccceecccccc
Q 048219          149 IIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       149 i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +.-.|++++|+.+++++.+|++|...+-+.+
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~  113 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVED  113 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence            6679999999999999999999998876653

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=98.03  E-value=1.4e-06  Score=69.08  Aligned_cols=73  Identities=21%  Similarity=0.251  Sum_probs=61.3

Q ss_pred             eEEEEEeccCCCCHHHHHhcCC--CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecc
Q 048219           98 KKILVYEYMSNGSLADILFNAE--KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIG  175 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a  175 (183)
                      .+||.|++|...+|.+++...+  ..........+..|++.++.|   +   +.+|+|+||.||+...+..+||.|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence            4789999999999999996432  234456667788999999999   4   8999999999999999999999999987


Q ss_pred             c
Q 048219          176 K  176 (183)
Q Consensus       176 ~  176 (183)
                      .
T Consensus       404 t  404 (516)
T KOG1033|consen  404 T  404 (516)
T ss_pred             e
Confidence            5

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.88  E-value=8.2e-05  Score=54.48  Aligned_cols=34  Identities=21%  Similarity=0.315  Sum_probs=28.8

Q ss_pred             CCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      ..++|+|+.+.|++++..+..-++||+.|.+++.
T Consensus       164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gDp  197 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGDP  197 (235)
T ss_pred             ceEEeCCCCCCcEEEECCCEEEEEeCcccCcCCh
Confidence            3589999999999998766567999999988764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.88  E-value=0.00013  Score=50.76  Aligned_cols=128  Identities=15%  Similarity=0.242  Sum_probs=78.2

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCcee-eeeceEEeCCeEEEEEeccCCCCHH
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLV-RLLGYSLEVSKKILVYEYMSNGSLA  112 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~l~  112 (183)
                      +.|+.|.+|.||++.+..+ .+++|.-..+  .....+..|+.+|..+.-.++. +++.+    +..++.|||+.|.+|.
T Consensus        28 ~~L~KG~~s~Vyl~~~~~~-~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~y----g~~~i~me~i~G~~L~  100 (201)
T COG2112          28 KELAKGTTSVVYLGEWRGG-EVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFY----GEDFIRMEYIDGRPLG  100 (201)
T ss_pred             hhhhcccccEEEEeeccCc-eEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEe----chhhhhhhhhcCcchh
Confidence            5699999999999987765 4555553332  2345678899988877654433 33332    2334559999998888


Q ss_pred             HHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCC-CCCEEecCCCcccccceecccccc
Q 048219          113 DILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIK-PQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       113 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~-~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +.....    +.....    .++.. .|.-+.  .+|-|+.++ |...++-..+.+-|+||--|++-.
T Consensus       101 ~~~~~~----~rk~l~----~vlE~-a~~LD~--~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k~  157 (201)
T COG2112         101 KLEIGG----DRKHLL----RVLEK-AYKLDR--LGIEHGELSRPWKNVLVNDRDVYIIDFDSATFKK  157 (201)
T ss_pred             hhhhcc----cHHHHH----HHHHH-HHHHHH--hccchhhhcCCceeEEecCCcEEEEEccchhhcc
Confidence            766421    122222    22222 222221  166666664 455555555688999999998653

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.84  E-value=0.00011  Score=54.44  Aligned_cols=33  Identities=12%  Similarity=0.141  Sum_probs=28.5

Q ss_pred             CCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      ..++|+|+.+.||++++++ +.++||..|..++.
T Consensus       146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp  178 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYASDGDI  178 (256)
T ss_pred             CeeecCCCCcCcEEEeCCC-CEEEeccccCcCCH
Confidence            3579999999999999877 78999999987754

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.82  E-value=0.00024  Score=51.86  Aligned_cols=34  Identities=18%  Similarity=0.172  Sum_probs=29.1

Q ss_pred             CCceecCCCCCCEEecC-CCcccccceeccccccc
Q 048219          147 TQIIHCDIKPQNILMDE-NRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~-~~~~~i~dfg~a~~~~~  180 (183)
                      ..++|+|+.+.||+++. ++.+.++||-.|.....
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~  204 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYR  204 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCch
Confidence            36899999999999997 57899999998876643

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK10593 hypothetical protein; Provisional

Probab=97.74  E-value=0.00083  Score=51.06  Aligned_cols=75  Identities=9%  Similarity=-0.008  Sum_probs=49.8

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCC---CceeeeeceEEe---CCeEEEEEeccC
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH---RNLVRLLGYSLE---VSKKILVYEYMS  107 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~---~~~~~lv~e~~~  107 (183)
                      +.||.|..+.+|.....+++ +.+|..+...  ....+..|...++.+..   ..++++++.+..   .+..+++||+++
T Consensus        20 ~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~   96 (297)
T PRK10593         20 ECISEQPYAALWALYDSQGN-PMPLMARSFS--TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLR   96 (297)
T ss_pred             eecCCccceeEEEEEcCCCC-EEEEEecccc--cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccC
Confidence            36899999999987655453 4455533211  12356778888888753   356777776643   366899999998


Q ss_pred             CCCH
Q 048219          108 NGSL  111 (183)
Q Consensus       108 ~~~l  111 (183)
                      +.++
T Consensus        97 G~~~  100 (297)
T PRK10593         97 GVSV  100 (297)
T ss_pred             CEec
Confidence            7643

>PRK05231 homoserine kinase; Provisional

Probab=97.67  E-value=0.0046  Score=47.34  Aligned_cols=33  Identities=21%  Similarity=0.413  Sum_probs=28.0

Q ss_pred             CCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          146 ETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       146 ~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +.++||+|+.+.|++++.+...-++||+.|...
T Consensus       186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~  218 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFACND  218 (319)
T ss_pred             CcccCCCCCCCCcEEEECCceEEEEecccccCC
Confidence            347999999999999997665689999998765

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.64  E-value=0.0028  Score=50.10  Aligned_cols=74  Identities=14%  Similarity=0.164  Sum_probs=48.9

Q ss_pred             cccCcCcCceEEEEEEcCC-cEEEEEEccchh-------hHHHHHHHHHHHHHhhcC---CCceeeeeceEEeCCeEEEE
Q 048219           34 EKVGRGSSGTVYKGAMINR-QLVAVNRLEKVL-------DEREREFQTEIKVIGRTH---HRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~-~~~~ik~~~~~~-------~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv  102 (183)
                      +.+|.|.++.||+....++ +.+.+|+-.+..       +....+...|.+.|..+.   ...+++++.+  ++...+++
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence            3689999999999987765 478888743110       122345666777777652   2345565554  45667899


Q ss_pred             EeccCCC
Q 048219          103 YEYMSNG  109 (183)
Q Consensus       103 ~e~~~~~  109 (183)
                      ||++++.
T Consensus       110 ME~L~~~  116 (401)
T PRK09550        110 MEDLSDH  116 (401)
T ss_pred             EecCCCc
Confidence            9998764

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.62  E-value=0.0009  Score=47.77  Aligned_cols=124  Identities=23%  Similarity=0.295  Sum_probs=81.0

Q ss_pred             HhchhcccCcCcC-ceEEEEEEcCCcEEEEEEccchh---------------h------HHHHHHHHHHHHHhhcC---C
Q 048219           29 TDGFKEKVGRGSS-GTVYKGAMINRQLVAVNRLEKVL---------------D------EREREFQTEIKVIGRTH---H   83 (183)
Q Consensus        29 ~~~~~~~lg~g~~-g~v~~~~~~~~~~~~ik~~~~~~---------------~------~~~~~~~~e~~~l~~l~---h   83 (183)
                      ...+.+.||.|.- |.||++... +..+|+|......               .      .....+.+|.+...+++   +
T Consensus        38 ~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~  116 (207)
T PF13095_consen   38 DIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR  116 (207)
T ss_pred             cEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence            3445678999999 999997654 4489999832100               0      11234778888777774   3


Q ss_pred             Cce--eeeeceEEeC------------------CeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhh
Q 048219           84 RNL--VRLLGYSLEV------------------SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD  143 (183)
Q Consensus        84 ~~i--~~~~~~~~~~------------------~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~  143 (183)
                      ..+  ++++|+..-.                  ..-.||.||++...          .....    =+.++..-+..+|.
T Consensus       117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~~----~~~~~~~dl~~~~k  182 (207)
T PF13095_consen  117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQIR----DIPQMLRDLKILHK  182 (207)
T ss_pred             cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccchh----HHHHHHHHHHHHHH
Confidence            355  8888887421                  01256777776542          11111    23566667778888


Q ss_pred             CCCCCceecCCCCCCEEecCCCcccccceecc
Q 048219          144 ECETQIIHCDIKPQNILMDENRCAKNFRLWIG  175 (183)
Q Consensus       144 ~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a  175 (183)
                      .   +|+-+|+++.|..=     -+|+|||.+
T Consensus       183 ~---gI~~~Dv~~~ny~~-----G~lvDfs~~  206 (207)
T PF13095_consen  183 L---GIVPRDVKPRNYRG-----GKLVDFSSS  206 (207)
T ss_pred             C---CeeeccCccccccC-----CEEEecccC
Confidence            6   99999999999883     388999864

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.56  E-value=0.0011  Score=50.22  Aligned_cols=141  Identities=18%  Similarity=0.217  Sum_probs=77.0

Q ss_pred             ccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCc--eeeeece------EEeCCeEEEEEecc
Q 048219           35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN--LVRLLGY------SLEVSKKILVYEYM  106 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~------~~~~~~~~lv~e~~  106 (183)
                      .+..|....+|+....++ .+.+|.....   ....+..|+.++..+.+..  +++++..      ....+..+.+++++
T Consensus        21 ~i~~G~~n~~y~v~~~~~-~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i   96 (296)
T cd05153          21 GISAGIENTNYFVTTDSG-RYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFL   96 (296)
T ss_pred             cccCccccceEEEEeCCC-cEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeC
Confidence            456676677888765443 5777776531   2234556777776664322  3333221      12345678999999


Q ss_pred             CCCCHHH-----------HHh---cC--C--C------CCChHHHH----------HHHHHHHHHHHHhhh----CCCCC
Q 048219          107 SNGSLAD-----------ILF---NA--E--K------QPNWIERT----------GIARDIARGILYLHD----ECETQ  148 (183)
Q Consensus       107 ~~~~l~~-----------~l~---~~--~--~------~~~~~~~~----------~i~~~i~~~l~~lh~----~~~~~  148 (183)
                      +|.++..           .+.   ..  .  .      ...+....          .....+..++.++..    ..+.+
T Consensus        97 ~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~  176 (296)
T cd05153          97 AGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRG  176 (296)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCc
Confidence            8765421           110   00  0  0      00111000          000112223333332    12347


Q ss_pred             ceecCCCCCCEEecCCCcccccceecccccc
Q 048219          149 IIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       149 i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++|+|+.|.|++++.++...++||+.|..+.
T Consensus       177 l~HgD~~~~Nil~~~~~~~~iIDfe~a~~g~  207 (296)
T cd05153         177 VIHADLFRDNVLFDGDELSGVIDFYFACTDA  207 (296)
T ss_pred             CCccCcCcccEEEeCCceEEEeehhhhcCch
Confidence            9999999999999987777899999988664

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.46  E-value=0.0017  Score=50.63  Aligned_cols=139  Identities=12%  Similarity=0.124  Sum_probs=87.1

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchh------------------------h--HHHHHHHHHHHHHhhcCCCcee
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------------------------D--EREREFQTEIKVIGRTHHRNLV   87 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~------------------------~--~~~~~~~~e~~~l~~l~h~~i~   87 (183)
                      ..|..|.-.-||.|...+|..+|||+.+...                        +  ......-.|++.|.++....|+
T Consensus       150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP  229 (520)
T KOG2270|consen  150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIP  229 (520)
T ss_pred             cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            3577777778999998888889998875311                        0  0011234577788887766655


Q ss_pred             eeeceEEeCCeEEEEEeccCCCCHH--HHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC
Q 048219           88 RLLGYSLEVSKKILVYEYMSNGSLA--DILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR  165 (183)
Q Consensus        88 ~~~~~~~~~~~~~lv~e~~~~~~l~--~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~  165 (183)
                      .+.-...  ....|||+++. .+-+  ..+.  ...+....+..+-.+++.-+..|...  +++||.||+-=|+|+. +|
T Consensus       230 ~PePIlL--k~hVLVM~FlG-rdgw~aPkLK--d~~ls~~ka~~~Y~~~v~~MR~lY~~--c~LVHADLSEfN~Lyh-dG  301 (520)
T KOG2270|consen  230 CPEPILL--KNHVLVMEFLG-RDGWAAPKLK--DASLSTSKARELYQQCVRIMRRLYQK--CRLVHADLSEFNLLYH-DG  301 (520)
T ss_pred             CCCceee--ecceEeeeecc-CCCCcCcccc--cccCChHHHHHHHHHHHHHHHHHHHH--hceeccchhhhhheEE-CC
Confidence            4333322  23468999984 2221  1221  12333334444446666667777665  4999999999999985 46


Q ss_pred             cccccceeccccccc
Q 048219          166 CAKNFRLWIGKVDEA  180 (183)
Q Consensus       166 ~~~i~dfg~a~~~~~  180 (183)
                      .+-++|.+-+...+.
T Consensus       302 ~lyiIDVSQSVE~DH  316 (520)
T KOG2270|consen  302 KLYIIDVSQSVEHDH  316 (520)
T ss_pred             EEEEEEccccccCCC
Confidence            678888887765543

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.40  E-value=0.0018  Score=48.66  Aligned_cols=34  Identities=26%  Similarity=0.417  Sum_probs=28.5

Q ss_pred             CceecCCCCCCEEecCCCc-ccccceecccccccc
Q 048219          148 QIIHCDIKPQNILMDENRC-AKNFRLWIGKVDEAR  181 (183)
Q Consensus       148 ~i~H~dl~~~nil~~~~~~-~~i~dfg~a~~~~~~  181 (183)
                      .++|+|+.+.|++++.++. .-|+||+.|.+++..
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDPa  220 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDPA  220 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCHH
Confidence            5799999999999997554 469999999988653

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=97.27  E-value=0.0033  Score=48.14  Aligned_cols=37  Identities=19%  Similarity=0.406  Sum_probs=32.8

Q ss_pred             CCceecCCCCCCEEecCCCcccccceecccccccccC
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARSD  183 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~~~~  183 (183)
                      ..++|+|+.+.|++++..+-+-++||+++.+++...|
T Consensus       198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP~~D  234 (321)
T COG3173         198 PVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDPLED  234 (321)
T ss_pred             ceeeeCCcccCCEEEeCCCeeEEEeccccccCCcHHH
Confidence            5689999999999999998899999999999876543

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=96.97  E-value=0.0017  Score=49.82  Aligned_cols=130  Identities=13%  Similarity=0.136  Sum_probs=82.5

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEcc--c--------------------hhhHHHHHHHHHHHHHhhcC-CCc-
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLE--K--------------------VLDEREREFQTEIKVIGRTH-HRN-   85 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~--~--------------------~~~~~~~~~~~e~~~l~~l~-h~~-   85 (183)
                      +.+..+||-|.-+-+|.+-+..|...++|.=.  +                    |..-..-.+..|...|..+. |.. 
T Consensus        94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp  173 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP  173 (465)
T ss_pred             hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence            44556899999999999988777666555311  0                    00111123567888888874 332 


Q ss_pred             eeeeeceEEeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC
Q 048219           86 LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR  165 (183)
Q Consensus        86 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~  165 (183)
                      +++.+    +-+..++|||++.|-++.+.-.    ..+...++   ..+..-+--|-.+   |++|+|..-=||++++++
T Consensus       174 VPkpi----D~~RH~Vvmelv~g~Pl~~v~~----v~d~~~ly---~~lm~~Iv~la~~---GlIHgDFNEFNimv~dd~  239 (465)
T KOG2268|consen  174 VPKPI----DHNRHCVVMELVDGYPLRQVRH----VEDPPTLY---DDLMGLIVRLANH---GLIHGDFNEFNIMVKDDD  239 (465)
T ss_pred             CCCcc----cccceeeHHHhhcccceeeeee----cCChHHHH---HHHHHHHHHHHHc---CceecccchheeEEecCC
Confidence            33333    4467889999998877765432    12233332   1222222233333   999999999999999999


Q ss_pred             ccccccee
Q 048219          166 CAKNFRLW  173 (183)
Q Consensus       166 ~~~i~dfg  173 (183)
                      .++++||=
T Consensus       240 ~i~vIDFP  247 (465)
T KOG2268|consen  240 KIVVIDFP  247 (465)
T ss_pred             CEEEeech
Confidence            99999994

>PLN02236 choline kinase

Probab=96.66  E-value=0.019  Score=44.60  Aligned_cols=33  Identities=21%  Similarity=0.283  Sum_probs=28.1

Q ss_pred             CCceecCCCCCCEEecC-CCcccccceecccccc
Q 048219          147 TQIIHCDIKPQNILMDE-NRCAKNFRLWIGKVDE  179 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~-~~~~~i~dfg~a~~~~  179 (183)
                      ..++|+|+++.||++++ ++.+.++||..|....
T Consensus       200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~  233 (344)
T PLN02236        200 IGFCHNDLQYGNIMIDEETRAITIIDYEYASYNP  233 (344)
T ss_pred             ceEEeCCCCcCcEEEeCCCCcEEEEeehhccccc
Confidence            46799999999999986 4689999999887654

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=96.62  E-value=0.0012  Score=57.15  Aligned_cols=93  Identities=22%  Similarity=0.186  Sum_probs=70.6

Q ss_pred             CCCceeeeeceEEeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe
Q 048219           82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM  161 (183)
Q Consensus        82 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~  161 (183)
                      .+|.+++.+..+....+.+++++++.++++...+...+..-.+..+. +...+.+++++||..   .+.|+|++|.|.+.
T Consensus       862 ~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs-~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~  937 (1205)
T KOG0606|consen  862 RSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARS-PILERVQSLESLHSS---LRKHRDLKPDSLLI  937 (1205)
T ss_pred             CCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccc-hhHHHHhhhhccccc---hhhcccccccchhh
Confidence            45666665555556678899999999999999887655332233333 445678899999986   68999999999999


Q ss_pred             cCCCccccccee-ccccc
Q 048219          162 DENRCAKNFRLW-IGKVD  178 (183)
Q Consensus       162 ~~~~~~~i~dfg-~a~~~  178 (183)
                      ..++..++.||| +.+++
T Consensus       938 ~~~gh~~l~~~~t~~~vg  955 (1205)
T KOG0606|consen  938 AYDGHRPLTDFGTLSKVG  955 (1205)
T ss_pred             cccCCcccCccccccccc
Confidence            999999999999 44444

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=96.57  E-value=0.052  Score=42.44  Aligned_cols=72  Identities=15%  Similarity=0.140  Sum_probs=45.1

Q ss_pred             ccCcCcCceEEEEEEcCC-cEEEEEEccchh-------hHHHHHHHHHHHHHhhcC--CC-ceeeeeceEEeCCeEEEEE
Q 048219           35 KVGRGSSGTVYKGAMINR-QLVAVNRLEKVL-------DEREREFQTEIKVIGRTH--HR-NLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~~-~~~~ik~~~~~~-------~~~~~~~~~e~~~l~~l~--h~-~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+|.|....||++....+ +.+.+|+-..-.       +-...+..-|.+.|....  -| .+++++  +.++....++|
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy--~~D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIF--HFDTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEE--EEccccceehH
Confidence            479999999999987643 567787743211       122345566777776543  23 344443  34566667899


Q ss_pred             eccCC
Q 048219          104 EYMSN  108 (183)
Q Consensus       104 e~~~~  108 (183)
                      |+++.
T Consensus        80 EdL~~   84 (370)
T TIGR01767        80 EDLSH   84 (370)
T ss_pred             hhCcc
Confidence            98864

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.48  E-value=0.02  Score=41.75  Aligned_cols=85  Identities=19%  Similarity=0.249  Sum_probs=53.2

Q ss_pred             HHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCc
Q 048219           70 EFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI  149 (183)
Q Consensus        70 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i  149 (183)
                      -+.++.+++.++.  .|+++..-  ..-.+.++.|.|-....          . ..   .++.-=+.+|.-.|+. ..+.
T Consensus       104 ~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i----------~-~~---N~i~agi~~L~~fH~~-~~~~  164 (308)
T PF07387_consen  104 LYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI----------N-FS---NFITAGIKDLMDFHSE-NQHC  164 (308)
T ss_pred             hhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc----------c-hh---HHHHHhHHHHHHhhcc-CCCe
Confidence            3456677776553  35666533  33456788888843211          0 00   1111113456667854 2489


Q ss_pred             eecCCCCCCEEecCCCccccccee
Q 048219          150 IHCDIKPQNILMDENRCAKNFRLW  173 (183)
Q Consensus       150 ~H~dl~~~nil~~~~~~~~i~dfg  173 (183)
                      +|+|..|+||+-|..|.+|+.|=+
T Consensus       165 lHGD~np~NiM~D~~G~lKlVDP~  188 (308)
T PF07387_consen  165 LHGDCNPDNIMCDKFGYLKLVDPV  188 (308)
T ss_pred             ecCCCChhheeecCCCCEEecChh
Confidence            999999999999999999998843

The function of this family is unknown.

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.47  E-value=0.045  Score=41.52  Aligned_cols=71  Identities=13%  Similarity=0.164  Sum_probs=40.3

Q ss_pred             ccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhc---CCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRT---HHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .++.|.-..+|... .+++.+.+|.-....   ...+..|.+-|+.+   ....+++++++....+..++++||++.+
T Consensus        24 ~v~GG~i~~a~~~~-~~~~~~FvK~~~~~~---~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   24 PVSGGDINEAYRLD-TDGGSYFVKVNSESG---RDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             EE--SSSSEEEEEE-TTS-EEEEEEEEGGG---CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred             ecCCCChhheEEEE-CCCccEEEEecChhh---HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence            56777777777755 566778888765322   22355566666666   3345778888877777779999998754

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=96.16  E-value=0.0098  Score=45.14  Aligned_cols=35  Identities=14%  Similarity=0.100  Sum_probs=30.0

Q ss_pred             CCCceecCCCCCCEEecCC----Ccccccceeccccccc
Q 048219          146 ETQIIHCDIKPQNILMDEN----RCAKNFRLWIGKVDEA  180 (183)
Q Consensus       146 ~~~i~H~dl~~~nil~~~~----~~~~i~dfg~a~~~~~  180 (183)
                      +..++|+|+.+.||+++.+    +.+.++||..|.....
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p  216 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR  216 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc
Confidence            4578999999999999974    7899999999987643

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=96.16  E-value=0.018  Score=45.03  Aligned_cols=72  Identities=13%  Similarity=0.092  Sum_probs=46.3

Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219           97 SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus        97 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      ...|++|++- |+++.. +    +.-.+.....++-+....+.-+..  ..++-|||+.-.||+++ +|++.|+||.+|+
T Consensus       299 ~y~yl~~kdh-gt~is~-i----k~~~~~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLIDfklsR  369 (488)
T COG5072         299 LYLYLHFKDH-GTPISI-I----KADRSEEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLIDFKLSR  369 (488)
T ss_pred             eEEEEEEecC-Cceeee-e----ecccHHHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEEeeeee
Confidence            3456777754 444422 1    122344445554443333333333  35889999999999999 9999999999998


Q ss_pred             c
Q 048219          177 V  177 (183)
Q Consensus       177 ~  177 (183)
                      .
T Consensus       370 l  370 (488)
T COG5072         370 L  370 (488)
T ss_pred             c
Confidence            3

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.11  E-value=0.0015  Score=53.88  Aligned_cols=131  Identities=18%  Similarity=0.086  Sum_probs=83.4

Q ss_pred             ccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCc-eeeeeceEEeCCeEEEEEeccCCC-CHH
Q 048219           35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN-LVRLLGYSLEVSKKILVYEYMSNG-SLA  112 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~~~~~-~l~  112 (183)
                      ..++++++.+++++....+....+.+...     ....-++++|.+++||| .+..++.+..+...++.++++.++ +..
T Consensus       249 ~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~  323 (829)
T KOG0576|consen  249 NFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSA  323 (829)
T ss_pred             HHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcccc
Confidence            45778888899887655555555555432     33455789999999999 667777777788889999998765 111


Q ss_pred             HHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          113 DILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       113 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .........+.......+...-..+++++|+.   .=+|+|    ||+..+ +..+..||+.+.-.
T Consensus       324 ~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L  381 (829)
T KOG0576|consen  324 LEMTVSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQL  381 (829)
T ss_pred             ccCChhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCccc
Confidence            11101111122223333455556788899874   447777    665544 66788888877644

>PLN02756 S-methyl-5-thioribose kinase

Probab=96.06  E-value=0.31  Score=38.88  Aligned_cols=72  Identities=10%  Similarity=0.142  Sum_probs=43.5

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchh-------hHHHHHHHHHHHHHhhcC---CCceeeeeceEEeCCeEEEEE
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL-------DEREREFQTEIKVIGRTH---HRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      +.+|.|....||+.... +..+.+|+-....       +....+...|...|+...   ...+++++.++.  +..+++|
T Consensus        38 ~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlvM  114 (418)
T PLN02756         38 KEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIGM  114 (418)
T ss_pred             EEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEEE
Confidence            36788999999987764 4457777643110       112333444566665442   245667766654  5567889


Q ss_pred             eccCC
Q 048219          104 EYMSN  108 (183)
Q Consensus       104 e~~~~  108 (183)
                      |++++
T Consensus       115 E~L~~  119 (418)
T PLN02756        115 RYLEP  119 (418)
T ss_pred             eecCC
Confidence            99965

>PRK10271 thiK thiamine kinase; Provisional

Probab=95.66  E-value=0.005  Score=43.49  Aligned_cols=32  Identities=9%  Similarity=0.130  Sum_probs=27.8

Q ss_pred             CceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          148 QIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       148 ~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      ..+|+|+.|.|+++.+++ ++++||+-|..++.
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp  109 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAGDGDI  109 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCcccCCCH
Confidence            568999999999998777 88999999987764

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=95.55  E-value=0.006  Score=43.46  Aligned_cols=33  Identities=12%  Similarity=0.166  Sum_probs=28.2

Q ss_pred             CceecCCCCCCEEecCCC-----cccccceeccccccc
Q 048219          148 QIIHCDIKPQNILMDENR-----CAKNFRLWIGKVDEA  180 (183)
Q Consensus       148 ~i~H~dl~~~nil~~~~~-----~~~i~dfg~a~~~~~  180 (183)
                      .++|+|+.+.|+++..++     .+.++||..++.+..
T Consensus       121 vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p  158 (196)
T smart00587      121 VLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSP  158 (196)
T ss_pred             EEeeCCCCccceeeccCCCCCccceEEEecccCCcCCh
Confidence            689999999999998543     588999999998764

subfamily of choline kinases

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=95.39  E-value=0.0082  Score=45.76  Aligned_cols=34  Identities=24%  Similarity=0.486  Sum_probs=29.1

Q ss_pred             CCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          146 ETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       146 ~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +.+++|+|+.+.|++++.++...++||+.+....
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~~  219 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFACTDA  219 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeecccccCcc
Confidence            3589999999999999988767899999986553

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.24  E-value=0.3  Score=35.97  Aligned_cols=58  Identities=17%  Similarity=0.244  Sum_probs=37.6

Q ss_pred             CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCC---CceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           51 NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH---RNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        51 ~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      ...++.+|.-.+   .....+..|+.-|..+.-   ..+.+++.+-...++.|+|+||++-+.+
T Consensus        38 g~~~~FvK~n~~---~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~   98 (286)
T COG3001          38 GTDPFFVKCNQR---EQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPL   98 (286)
T ss_pred             CCcceEEEecch---hhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCC
Confidence            355677776443   233456667776665543   3456666666678899999999986443

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.69  E-value=0.013  Score=42.14  Aligned_cols=32  Identities=22%  Similarity=0.320  Sum_probs=22.2

Q ss_pred             CCceecCCCCCCEEe-cCCCcccccceeccccc
Q 048219          147 TQIIHCDIKPQNILM-DENRCAKNFRLWIGKVD  178 (183)
Q Consensus       147 ~~i~H~dl~~~nil~-~~~~~~~i~dfg~a~~~  178 (183)
                      ..++|+|+.+.||++ +.++.++++||--|...
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n  175 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGYN  175 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-EEE
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHhhc
Confidence            367999999999999 78899999999887653

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=94.62  E-value=0.011  Score=45.08  Aligned_cols=35  Identities=17%  Similarity=0.223  Sum_probs=30.6

Q ss_pred             CCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          146 ETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       146 ~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      +.++||+|+.+.|++++.++.+.++||..|.....
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d~~  229 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASFASP  229 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhcccCCc
Confidence            34799999999999999988899999999887643

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=94.52  E-value=0.089  Score=40.69  Aligned_cols=30  Identities=27%  Similarity=0.405  Sum_probs=26.9

Q ss_pred             ceecCCCCCCEEecCCCc-ccccceeccccc
Q 048219          149 IIHCDIKPQNILMDENRC-AKNFRLWIGKVD  178 (183)
Q Consensus       149 i~H~dl~~~nil~~~~~~-~~i~dfg~a~~~  178 (183)
                      +||+|+.+.|++++.+.. ..++||+-|..+
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~~  229 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGYG  229 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccccc
Confidence            899999999999998875 889999988754

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=94.37  E-value=0.021  Score=43.49  Aligned_cols=31  Identities=19%  Similarity=0.191  Sum_probs=26.7

Q ss_pred             CCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .+++|+|+.+.|++++. +.+.++||+.+...
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~~  217 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTID  217 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccccC
Confidence            47899999999999987 66789999977654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=94.22  E-value=0.032  Score=46.53  Aligned_cols=44  Identities=23%  Similarity=0.422  Sum_probs=38.3

Q ss_pred             HHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          133 DIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       133 ~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++..|+.|+|...  ++||+++.|++|.++..+..||+.|+.+..-
T Consensus       107 ~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~  150 (700)
T KOG2137|consen  107 NVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNA  150 (700)
T ss_pred             cccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhcc
Confidence            4458999999863  9999999999999999999999999887643

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=93.83  E-value=0.12  Score=38.89  Aligned_cols=32  Identities=16%  Similarity=0.225  Sum_probs=28.7

Q ss_pred             CceecCCCCCCEEecCCCcccccceecccccc
Q 048219          148 QIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       148 ~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      -+||+|+.+.|++.++.+.+.++||-=|...+
T Consensus       154 v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D  185 (269)
T COG0510         154 VPCHNDLNPGNLLLTDKGGLFLIDWEYAGLND  185 (269)
T ss_pred             eeecCCCCccceEEcCCCcEEEEecccCCCcc
Confidence            48999999999999999999999998877654

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=93.79  E-value=0.027  Score=42.57  Aligned_cols=33  Identities=15%  Similarity=0.177  Sum_probs=28.0

Q ss_pred             CceecCCCCCCEEecCC--C---cccccceeccccccc
Q 048219          148 QIIHCDIKPQNILMDEN--R---CAKNFRLWIGKVDEA  180 (183)
Q Consensus       148 ~i~H~dl~~~nil~~~~--~---~~~i~dfg~a~~~~~  180 (183)
                      -++|+|+.+.||++..+  +   .++++||..++.+..
T Consensus       216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~g~p  253 (294)
T PF02958_consen  216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARYGSP  253 (294)
T ss_pred             EEEcCccCHHhEeEccccccccccceeeccccccCCCc
Confidence            57999999999999765  2   589999999998754

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PRK11768 serine/threonine protein kinase; Provisional

Probab=92.81  E-value=0.04  Score=42.48  Aligned_cols=32  Identities=25%  Similarity=0.235  Sum_probs=26.5

Q ss_pred             CCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      .+++|+|+.+.|++++ + .+.++||+-+..+..
T Consensus       196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~g~~  227 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D-GPHFVDLDDARMGPA  227 (325)
T ss_pred             ccceecCCCchhcccc-C-CcEEEeCCCCCCCCH
Confidence            4689999999999995 3 578999999886643

>PRK06148 hypothetical protein; Provisional

Probab=92.75  E-value=0.2  Score=44.73  Aligned_cols=33  Identities=24%  Similarity=0.223  Sum_probs=26.6

Q ss_pred             CCCceecCCCCCCEEecCCC--ccc-ccceeccccc
Q 048219          146 ETQIIHCDIKPQNILMDENR--CAK-NFRLWIGKVD  178 (183)
Q Consensus       146 ~~~i~H~dl~~~nil~~~~~--~~~-i~dfg~a~~~  178 (183)
                      +..++|+|+.+.||+++.++  .+. |+|||-+...
T Consensus       202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~~  237 (1013)
T PRK06148        202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAVHA  237 (1013)
T ss_pred             CcceECCCCCcccEEEcCCCCcceEEEEECcccccc
Confidence            34799999999999999774  444 8999987643

>PTZ00384 choline kinase; Provisional

Probab=92.56  E-value=0.9  Score=36.01  Aligned_cols=31  Identities=16%  Similarity=0.022  Sum_probs=24.9

Q ss_pred             CCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ..++|.|+-+.||+.++ +.+.++||--|...
T Consensus       227 ~VfCHNDL~~gNIL~~~-~~l~lID~EYA~~n  257 (383)
T PTZ00384        227 VLFCHNDLFFTNILDFN-QGIYFIDFDFAGFN  257 (383)
T ss_pred             eeeeeccCCcccEEecC-CCEEEEEeccccCC
Confidence            46799999999998754 45899999877643

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=91.92  E-value=0.1  Score=40.32  Aligned_cols=32  Identities=16%  Similarity=0.184  Sum_probs=26.9

Q ss_pred             CceecCCCCCCEEecC-CCcccccceecccccc
Q 048219          148 QIIHCDIKPQNILMDE-NRCAKNFRLWIGKVDE  179 (183)
Q Consensus       148 ~i~H~dl~~~nil~~~-~~~~~i~dfg~a~~~~  179 (183)
                      -++|+|+.+.||++++ ++.++++||.-|....
T Consensus       183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd  215 (330)
T PLN02421        183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSY  215 (330)
T ss_pred             EEEECCCCcccEEEeCCCCcEEEEcccccCCCc
Confidence            4799999999999975 4789999999887543

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=91.23  E-value=0.41  Score=38.43  Aligned_cols=70  Identities=14%  Similarity=0.176  Sum_probs=51.6

Q ss_pred             EEEEEeccCCC-CHHHHHhc---CC--CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccc
Q 048219           99 KILVYEYMSNG-SLADILFN---AE--KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFR  171 (183)
Q Consensus        99 ~~lv~e~~~~~-~l~~~l~~---~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~d  171 (183)
                      +.+.|..+++- .+..+..-   .+  -...|...+.....++.+..-+|.+   |.+-+|+.++|+|+++.+.+.+.|
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVd  160 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVD  160 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEc
Confidence            56777777653 22222211   11  2246777788899999999999998   888999999999999988888775

>PRK06149 hypothetical protein; Provisional

Probab=90.23  E-value=0.42  Score=42.50  Aligned_cols=32  Identities=16%  Similarity=0.059  Sum_probs=25.5

Q ss_pred             CCCceecCCCCCCEEecCCC--c---ccccceecccc
Q 048219          146 ETQIIHCDIKPQNILMDENR--C---AKNFRLWIGKV  177 (183)
Q Consensus       146 ~~~i~H~dl~~~nil~~~~~--~---~~i~dfg~a~~  177 (183)
                      +.+++|+|+++.||+++.+.  .   .-++|||.+..
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~~  243 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLVR  243 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccchh
Confidence            45899999999999998653  3   36899998753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	183
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-29
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		3e-29
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-24
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-24
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-24
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-23
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-14
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-14
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		6e-13
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-12
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-12
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-12
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-12
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-12
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		4e-12
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		4e-12
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		6e-12
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		6e-12
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		6e-12
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		2e-11
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-11
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-11
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-11
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		3e-11
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		3e-11
4h58_A	275	Braf In Complex With Compound 3 Length = 275		3e-11
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		4e-11
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		4e-11
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		4e-11
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		4e-11
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		4e-11
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		4e-11
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-11
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		5e-11
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		5e-11
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		5e-11
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		5e-11
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		5e-11
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		5e-11
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		5e-11
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		5e-11
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		5e-11
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-11
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		6e-11
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		6e-11
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		6e-11
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		6e-11
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		6e-11
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		6e-11
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		6e-11
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		6e-11
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		6e-11
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		7e-11
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		7e-11
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		7e-11
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		7e-11
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		8e-11
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		8e-11
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		8e-11
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		8e-11
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-11
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-11
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		9e-11
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		9e-11
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		9e-11
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-10
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-10
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		3e-10
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		3e-10
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		3e-10
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		3e-10
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		3e-10
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		3e-10
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		4e-10
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		4e-10
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		4e-10
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		4e-10
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		4e-10
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		5e-10
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-10
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		7e-10
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		7e-10
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		8e-10
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		8e-10
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		8e-10
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		8e-10
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		8e-10
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		8e-10
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		8e-10
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		8e-10
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-09
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		1e-09
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-09
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-09
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-09
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-09
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-09
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-09
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-09
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		8e-09
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		8e-09
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		9e-09
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		9e-09
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		9e-09
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		9e-09
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		9e-09
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		1e-08
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-08
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-08
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-08
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-08
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-08
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-08
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		2e-08
1fvr_A	327	Tie2 Kinase Domain Length = 327		2e-08
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-08
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-08
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		2e-08
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		3e-08
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		3e-08
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		3e-08
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		3e-08
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		3e-08
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		3e-08
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		3e-08
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		3e-08
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		3e-08
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		3e-08
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		4e-08
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		4e-08
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-08
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		4e-08
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		4e-08
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-08
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		4e-08
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		4e-08
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		4e-08
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		4e-08
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-08
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		4e-08
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		5e-08
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-08
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		6e-08
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		7e-08
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		8e-08
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		8e-08
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		8e-08
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		9e-08
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		9e-08
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		1e-07
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		2e-07
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-07
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		2e-07
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-07
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		2e-07
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		2e-07
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		2e-07
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		2e-07
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-07
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-07
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		2e-07
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-07
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-07
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		3e-07
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		3e-07
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		4e-07
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		4e-07
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		4e-07
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		5e-07
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		6e-07
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		6e-07
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		6e-07
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		6e-07
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		6e-07
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		7e-07
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		7e-07
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		8e-07
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		1e-06
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-06
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-06
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		1e-06
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		2e-06
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		2e-06
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-06
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		2e-06
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-06
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-06
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		2e-06
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-06
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		2e-06
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		2e-06
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		2e-06
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-06
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		2e-06
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		2e-06
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		2e-06
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-06
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-06
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		2e-06
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		2e-06
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		3e-06
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		3e-06
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		3e-06
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-06
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		4e-06
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		4e-06
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		4e-06
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		4e-06
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		4e-06
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		4e-06
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		4e-06
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		4e-06
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		4e-06
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		5e-06
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		5e-06
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		6e-06
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		6e-06
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		6e-06
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		6e-06
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		6e-06
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		7e-06
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		7e-06
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		7e-06
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		7e-06
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		7e-06
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		7e-06
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		7e-06
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		7e-06
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		7e-06
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		7e-06
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		7e-06
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		7e-06
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		7e-06
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		7e-06
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		7e-06
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		7e-06
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		7e-06
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		7e-06
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		7e-06
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		7e-06
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		7e-06
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		7e-06
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		7e-06
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		7e-06
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		8e-06
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		8e-06
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		8e-06
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		8e-06
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		8e-06
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		8e-06
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		8e-06
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		8e-06
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		8e-06
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		8e-06
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		8e-06
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		8e-06
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		8e-06
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		8e-06
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		9e-06
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		9e-06
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		9e-06
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		9e-06
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		9e-06
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		9e-06
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		9e-06
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		9e-06
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		1e-05
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		1e-05
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		1e-05
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-05
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		1e-05
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		1e-05
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		1e-05
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		1e-05
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-05
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-05
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		1e-05
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-05
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-05
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		1e-05
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		1e-05
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		1e-05
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		1e-05
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		1e-05
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		1e-05
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-05
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-05
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-05
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-05
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-05
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		2e-05
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		2e-05
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		2e-05
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-05
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-05
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-05
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-05
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		2e-05
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		2e-05
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		2e-05
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-05
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		2e-05
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-05
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-05
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-05
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		3e-05
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		3e-05
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		3e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		3e-05
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		3e-05
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		3e-05
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		3e-05
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		3e-05
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		3e-05
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		3e-05
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-05
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		3e-05
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		3e-05
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		3e-05
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		3e-05
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		3e-05
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-05
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		3e-05
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		3e-05
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		3e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		3e-05
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-05
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		3e-05
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		4e-05
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		4e-05
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		4e-05
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		5e-05
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		5e-05
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		5e-05
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		5e-05
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		5e-05
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		5e-05
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		5e-05
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		5e-05
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		6e-05
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		6e-05
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		6e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		6e-05
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		6e-05
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		6e-05
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		6e-05
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		6e-05
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		6e-05
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		7e-05
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		7e-05
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		8e-05
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		8e-05
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		8e-05
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		8e-05
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		8e-05
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		9e-05
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-04
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-04
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		1e-04
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-04
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		1e-04
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		2e-04
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		2e-04
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		2e-04
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-04
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		2e-04
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-04
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		2e-04
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		2e-04
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		2e-04
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-04
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		2e-04
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-04
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		2e-04
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		2e-04
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-04
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-04
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-04
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		2e-04
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-04
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-04
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-04
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-04
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-04
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		2e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		2e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-04
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		3e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		3e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		3e-04
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		3e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		3e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		3e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-04
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		3e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		3e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		3e-04
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		3e-04
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		3e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		3e-04
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		3e-04
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		3e-04
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		3e-04
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		3e-04
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		3e-04
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		3e-04
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		3e-04
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		3e-04
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		3e-04
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		3e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		4e-04
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		4e-04
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		4e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		4e-04
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		4e-04
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		4e-04
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		4e-04
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		4e-04
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		4e-04
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		4e-04
3g51_A	325	Structural Diversity Of The Active Conformation Of		4e-04
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		4e-04
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		4e-04
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		4e-04
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		5e-04
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		5e-04
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		5e-04
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		5e-04
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		5e-04
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		5e-04
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		5e-04
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-04
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		6e-04
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		6e-04
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		6e-04
4fie_A	423	Full-Length Human Pak4 Length = 423		6e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		6e-04
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		6e-04
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		6e-04
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		6e-04
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		6e-04
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		6e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		6e-04
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		7e-04
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		7e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		7e-04
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		7e-04
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		7e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		7e-04
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		7e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		7e-04
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		7e-04
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		7e-04
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		7e-04
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		7e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		7e-04
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		7e-04
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		7e-04
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		7e-04
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		8e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		8e-04
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-04
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		8e-04
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		8e-04
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  124 bits (311), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/150 (46%), Positives = 96/150 (64%), Gaps = 6/150 (4%)
Query: 20  FSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIK 76
           FS  EL+  +D F  K  +GRG  G VYKG + +  LVAV RL E+     E +FQTE++
Sbjct: 28  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 77  VIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN-AEKQP--NWIERTGIARD 133
           +I    HRNL+RL G+ +  ++++LVY YM+NGS+A  L    E QP  +W +R  IA  
Sbjct: 88  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 134 IARGILYLHDECETQIIHCDIKPQNILMDE 163
            ARG+ YLHD C+ +IIH D+K  NIL+DE
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDE 177

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/150 (46%), Positives = 96/150 (64%), Gaps = 6/150 (4%)
Query: 20  FSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIK 76
           FS  EL+  +D F  K  +GRG  G VYKG + +  LVAV RL E+     E +FQTE++
Sbjct: 20  FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 77  VIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN-AEKQP--NWIERTGIARD 133
           +I    HRNL+RL G+ +  ++++LVY YM+NGS+A  L    E QP  +W +R  IA  
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 134 IARGILYLHDECETQIIHCDIKPQNILMDE 163
            ARG+ YLHD C+ +IIH D+K  NIL+DE
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDE 169

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 94/175 (53%), Gaps = 18/175 (10%)
Query: 19  SFSYAELKKITDGFKE--------KVGRGSSGTVYKGAMINRQLVAVNRLEKVLD----E 66
           SFS+ ELK +T+ F E        K+G G  G VYKG  +N   VAV +L  ++D    E
Sbjct: 14  SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 72
Query: 67  REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NW 124
            +++F  EIKV+ +  H NLV LLG+S +     LVY YM NGSL D L   +  P  +W
Sbjct: 73  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 125 IERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
             R  IA+  A GI +LH   E   IH DIK  NIL+DE   AK     + +  E
Sbjct: 133 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 94/175 (53%), Gaps = 18/175 (10%)
Query: 19  SFSYAELKKITDGFKE--------KVGRGSSGTVYKGAMINRQLVAVNRLEKVLD----E 66
           SFS+ ELK +T+ F E        K+G G  G VYKG  +N   VAV +L  ++D    E
Sbjct: 14  SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 72
Query: 67  REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NW 124
            +++F  EIKV+ +  H NLV LLG+S +     LVY YM NGSL D L   +  P  +W
Sbjct: 73  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 125 IERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
             R  IA+  A GI +LH   E   IH DIK  NIL+DE   AK     + +  E
Sbjct: 133 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 94/175 (53%), Gaps = 18/175 (10%)
Query: 19  SFSYAELKKITDGFKE--------KVGRGSSGTVYKGAMINRQLVAVNRLEKVLD----E 66
           SFS+ ELK +T+ F E        K+G G  G VYKG  +N   VAV +L  ++D    E
Sbjct: 8   SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 66
Query: 67  REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NW 124
            +++F  EIKV+ +  H NLV LLG+S +     LVY YM NGSL D L   +  P  +W
Sbjct: 67  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 125 IERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
             R  IA+  A GI +LH   E   IH DIK  NIL+DE   AK     + +  E
Sbjct: 127 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 178

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  105 bits (261), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 91/175 (52%), Gaps = 18/175 (10%)
Query: 19  SFSYAELKKITDGFKE--------KVGRGSSGTVYKGAMINRQLVAVNRLEKVLD----E 66
           SFS+ ELK +T+ F E        K G G  G VYKG  +N   VAV +L  ++D    E
Sbjct: 5   SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 63
Query: 67  REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NW 124
            +++F  EIKV  +  H NLV LLG+S +     LVY Y  NGSL D L   +  P  +W
Sbjct: 64  LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 125 IERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
             R  IA+  A GI +LH   E   IH DIK  NIL+DE   AK     + +  E
Sbjct: 124 HXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 175

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 8   DSNYSTLTTPFS---FSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEK 62
           D+  S+   PF        +L++ T+ F  K  +G G  G VYKG + +   VA+ R   
Sbjct: 14  DALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTP 73
Query: 63  VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAE--- 119
              +   EF+TEI+ +    H +LV L+G+  E ++ IL+Y+YM NG+L   L+ ++   
Sbjct: 74  ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT 133
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
              +W +R  I    ARG+ YLH      IIH D+K  NIL+DEN   K
Sbjct: 134 MSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPK 179

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 8   DSNYSTLTTPFS---FSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEK 62
           D+  S+   PF        +L++ T+ F  K  +G G  G VYKG + +   VA+ R   
Sbjct: 14  DALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTP 73
Query: 63  VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAE--- 119
              +   EF+TEI+ +    H +LV L+G+  E ++ IL+Y+YM NG+L   L+ ++   
Sbjct: 74  ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT 133
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
              +W +R  I    ARG+ YLH      IIH D+K  NIL+DEN   K
Sbjct: 134 MSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPK 179

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 70.1 bits (170), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLL 90
            KEK+G GS GTV++       +     +E+    ER  EF  E+ ++ R  H N+V  +
Sbjct: 41  IKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 91  GYSLEVSKKILVYEYMSNGSLADILF--NAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           G   +     +V EY+S GSL  +L    A +Q +   R  +A D+A+G+ YLH+     
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPP 159
Query: 149 IIHCDIKPQNILMDENRCAK 168
           I+H D+K  N+L+D+    K
Sbjct: 160 IVHRDLKSPNLLVDKKYTVK 179

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 16/143 (11%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           F +++G G  G V+ G  +N+  VA+  + K     E +F  E +V+ +  H  LV+L G
Sbjct: 31  FVQEIGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 92  YSLEVSKKILVYEYMSNGSLADI------LFNAEKQPNWIERTGIARDIARGILYLHDEC 145
             LE +   LV+E+M +G L+D       LF AE         G+  D+  G+ YL + C
Sbjct: 90  VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET------LLGMCLDVCEGMAYLEEAC 143
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
              +IH D+  +N L+ EN+  K
Sbjct: 144 ---VIHRDLAARNCLVGENQVIK 163

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           F +++G G  G V+ G  +N+  VA+  + E  + E +  F  E +V+ +  H  LV+L 
Sbjct: 9   FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLY 66
Query: 91  GYSLEVSKKILVYEYMSNGSLADI------LFNAEKQPNWIERTGIARDIARGILYLHDE 144
           G  LE +   LV+E+M +G L+D       LF AE         G+  D+  G+ YL + 
Sbjct: 67  GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET------LLGMCLDVCEGMAYLEEA 120
Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
           C   +IH D+  +N L+ EN+  K
Sbjct: 121 C---VIHRDLAARNCLVGENQVIK 141

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           F +++G G  G V+ G  +N+  VA+  + E  + E +  F  E +V+ +  H  LV+L 
Sbjct: 11  FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLY 68
Query: 91  GYSLEVSKKILVYEYMSNGSLADI------LFNAEKQPNWIERTGIARDIARGILYLHDE 144
           G  LE +   LV+E+M +G L+D       LF AE         G+  D+  G+ YL + 
Sbjct: 69  GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET------LLGMCLDVCEGMAYLEEA 122
Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
           C   +IH D+  +N L+ EN+  K
Sbjct: 123 C---VIHRDLAARNCLVGENQVIK 143

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           F +++G G  G V+ G  +N+  VA+  + E  + E +  F  E +V+ +  H  LV+L 
Sbjct: 14  FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLY 71
Query: 91  GYSLEVSKKILVYEYMSNGSLADI------LFNAEKQPNWIERTGIARDIARGILYLHDE 144
           G  LE +   LV+E+M +G L+D       LF AE         G+  D+  G+ YL + 
Sbjct: 72  GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET------LLGMCLDVCEGMAYLEEA 125
Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
           C   +IH D+  +N L+ EN+  K
Sbjct: 126 C---VIHRDLAARNCLVGENQVIK 146

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLL 90
            KEK+G GS GTV++       +     +E+    ER  EF  E+ ++ R  H N+V  +
Sbjct: 41  IKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 91  GYSLEVSKKILVYEYMSNGSLADILF--NAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           G   +     +V EY+S GSL  +L    A +Q +   R  +A D+A+G+ YLH+     
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPP 159
Query: 149 IIHCDIKPQNILMDENRCAK 168
           I+H ++K  N+L+D+    K
Sbjct: 160 IVHRNLKSPNLLVDKKYTVK 179

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Query: 33  KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLLG 91
           +E VGRG+ G V K A    + VA+ ++E    E ER+ F  E++ + R +H N+V+L G
Sbjct: 13  EEVVGRGAFGVVCK-AKWRAKDVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR--DIARGILYLHDECETQI 149
             L  +   LV EY   GSL ++L  AE  P +     ++     ++G+ YLH      +
Sbjct: 69  ACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 150 IHCDIKPQNILM 161
           IH D+KP N+L+
Sbjct: 127 IHRDLKPPNLLL 138

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Query: 33  KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLLG 91
           +E VGRG+ G V K A    + VA+ ++E    E ER+ F  E++ + R +H N+V+L G
Sbjct: 14  EEVVGRGAFGVVCK-AKWRAKDVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR--DIARGILYLHDECETQI 149
             L  +   LV EY   GSL ++L  AE  P +     ++     ++G+ YLH      +
Sbjct: 70  ACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 150 IHCDIKPQNILM 161
           IH D+KP N+L+
Sbjct: 128 IHRDLKPPNLLL 139

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           F +++G G  G V+ G  +N+  VA+  + E  + E +  F  E +V+ +  H  LV+L 
Sbjct: 12  FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLY 69
Query: 91  GYSLEVSKKILVYEYMSNGSLADI------LFNAEKQPNWIERTGIARDIARGILYLHDE 144
           G  LE +   LV E+M +G L+D       LF AE         G+  D+  G+ YL + 
Sbjct: 70  GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAET------LLGMCLDVCEGMAYLEEA 123
Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
           C   +IH D+  +N L+ EN+  K
Sbjct: 124 C---VIHRDLAARNCLVGENQVIK 144

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           F +++G G  G V+ G  +N+  VA+  + E  + E +  F  E +V+ +  H  LV+L 
Sbjct: 11  FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLY 68
Query: 91  GYSLEVSKKILVYEYMSNGSLADI------LFNAEKQPNWIERTGIARDIARGILYLHDE 144
           G  LE +   LV+E+M +G L+D       LF AE         G+  D+  G+ YL   
Sbjct: 69  GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET------LLGMCLDVCEGMAYLE-- 120
Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
            E  +IH D+  +N L+ EN+  K
Sbjct: 121 -EASVIHRDLAARNCLVGENQVIK 143

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 15/141 (10%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRLLGY 92
           E VG G+ G VYKG  +    +A  ++  V  + E E + EI ++ + +HHRN+    G 
Sbjct: 30  ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 93  SLEVSKK------ILVYEYMSNGSLADILFNAEK---QPNWIERTGIARDIARGILYLHD 143
            ++ +         LV E+   GS+ D++ N +    +  WI    I R+I RG+ +LH 
Sbjct: 90  FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRGLSHLH- 146
Query: 144 ECETQIIHCDIKPQNILMDEN 164
             + ++IH DIK QN+L+ EN
Sbjct: 147 --QHKVIHRDIKGQNVLLTEN 165

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
           EL        + VG G  G V  G +     +++ VA+  L+    E++R +F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
           G+  H N++RL G   +    ++V EYM NGSL   L   + Q   I+  G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
            YL D      +H D+  +NIL++ N   K     +G+V E
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27  KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           +I DG     +++G GS GTVYKG       V +  +     ++ + F+ E+ V+ +T H
Sbjct: 20  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
            N++  +GYS +    I V ++    SL   L  +E +    +   IAR  ARG+ YLH 
Sbjct: 80  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
           +    IIH D+K  NI + E+   K
Sbjct: 139 KS---IIHRDLKSNNIFLHEDNTVK 160

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27  KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           +I DG     +++G GS GTVYKG       V +  +     ++ + F+ E+ V+ +T H
Sbjct: 8   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 67
Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
            N++  +GYS +    I V ++    SL   L  +E +    +   IAR  ARG+ YLH 
Sbjct: 68  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
           +    IIH D+K  NI + E+   K
Sbjct: 127 KS---IIHRDLKSNNIFLHEDNTVK 148

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27  KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           +I DG     +++G GS GTVYKG       V +  +     ++ + F+ E+ V+ +T H
Sbjct: 20  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
            N++  +GYS    +  +V ++    SL   L  +E +    +   IAR  ARG+ YLH 
Sbjct: 80  VNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
           +    IIH D+K  NI + E+   K
Sbjct: 139 KS---IIHRDLKSNNIFLHEDNTVK 160

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 33  KEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLV 87
           +E +G G  G V +G +         VA+  L+    ER+R EF +E  ++G+  H N++
Sbjct: 21  EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
           RL G        +++ E+M NG+L   L   + Q   I+  G+ R IA G+ YL    E 
Sbjct: 81  RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEM 137
Query: 148 QIIHCDIKPQNILMDENRCAK 168
             +H D+  +NIL++ N   K
Sbjct: 138 SYVHRDLAARNILVNSNLVCK 158

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 33  KEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLV 87
           +E +G G  G V +G +         VA+  L+    ER+R EF +E  ++G+  H N++
Sbjct: 19  EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
           RL G        +++ E+M NG+L   L   + Q   I+  G+ R IA G+ YL    E 
Sbjct: 79  RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEM 135
Query: 148 QIIHCDIKPQNILMDENRCAK 168
             +H D+  +NIL++ N   K
Sbjct: 136 SYVHRDLAARNILVNSNLVCK 156

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 27  KITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL 86
           +IT G  +++G GS GTVYKG       V +  +     ++ + F+ E+ V+ +T H N+
Sbjct: 9   QITVG--QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           +  +GYS +    I V ++    SL   L   E +   I+   IAR  A+G+ YLH +  
Sbjct: 67  LLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 147 TQIIHCDIKPQNILMDENRCAK 168
             IIH D+K  NI + E+   K
Sbjct: 125 --IIHRDLKSNNIFLHEDLTVK 144

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27  KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           +I DG     +++G GS GTVYKG       V +  +     ++ + F+ E+ V+ +T H
Sbjct: 9   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
            N++  +GYS +    I V ++    SL   L   E +   I+   IAR  A+G+ YLH 
Sbjct: 69  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
           +    IIH D+K  NI + E+   K
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVK 149

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27  KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           +I DG     +++G GS GTVYKG       V +  +     ++ + F+ E+ V+ +T H
Sbjct: 9   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
            N++  +GYS +    I V ++    SL   L   E +   I+   IAR  A+G+ YLH 
Sbjct: 69  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
           +    IIH D+K  NI + E+   K
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVK 149

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 34  EKVGRGSSGTVYKGAMINRQ---LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           E +G+G  G   K  + +R+   ++ +  L +  +E +R F  E+KV+    H N+++ +
Sbjct: 16  EVLGKGCFGQAIK--VTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G   +  +   + EY+  G+L  I+ + + Q  W +R   A+DIA G+ YLH      II
Sbjct: 74  GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNII 130
Query: 151 HCDIKPQNILMDENR 165
           H D+   N L+ EN+
Sbjct: 131 HRDLNSHNCLVRENK 145

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 27  KITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL 86
           +IT G  +++G GS GTVYKG       V +  +     ++ + F+ E+ V+ +T H N+
Sbjct: 11  QITVG--QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 68
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           +  +GYS +    I V ++    SL   L   E +   I+   IAR  A+G+ YLH +  
Sbjct: 69  LLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 126
Query: 147 TQIIHCDIKPQNILMDENRCAK 168
             IIH D+K  NI + E+   K
Sbjct: 127 --IIHRDLKSNNIFLHEDLTVK 146

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27  KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           +I DG     +++G GS GTVYKG       V +  +     ++ + F+ E+ V+ +T H
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
            N++  +GYS +    I V ++    SL   L   E +   I+   IAR  A+G+ YLH 
Sbjct: 64  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
           +    IIH D+K  NI + E+   K
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVK 144

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 27  KITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL 86
           +IT G  +++G GS GTVYKG       V +  +     ++ + F+ E+ V+ +T H N+
Sbjct: 9   QITVG--QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           +  +GYS    +  +V ++    SL   L   E +   I+   IAR  A+G+ YLH +  
Sbjct: 67  LLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 147 TQIIHCDIKPQNILMDENRCAK 168
             IIH D+K  NI + E+   K
Sbjct: 125 --IIHRDLKSNNIFLHEDLTVK 144

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 36  VGRGSSGTVYKGAM-INRQ---LVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRLL 90
           +G G SG V  G + +  Q    VA+  L+    ER+R +F +E  ++G+  H N++RL 
Sbjct: 57  IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G        ++V EYM NGSL   L   + Q   ++  G+ R +  G+ YL D      +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYV 173
Query: 151 HCDIKPQNILMDENRCAKNFRLWIGKVDEARSD 183
           H D+  +N+L+D N   K     + +V E   D
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 36  VGRGSSGTVYKGAM-INRQ---LVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRLL 90
           +G G SG V  G + +  Q    VA+  L+    ER+R +F +E  ++G+  H N++RL 
Sbjct: 57  IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G        ++V EYM NGSL   L   + Q   ++  G+ R +  G+ YL D      +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYV 173
Query: 151 HCDIKPQNILMDENRCAKNFRLWIGKVDEARSD 183
           H D+  +N+L+D N   K     + +V E   D
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 20  FSYAELKKITDG---FKEKVGRGSSGTVYKGAMI-NRQLVAVNRL-------EKVLDERE 68
           F  + L  + D    +++++G+G  G V+KG ++ ++ +VA+  L       E  + E+ 
Sbjct: 8   FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 69  REFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT 128
           +EFQ E+ ++   +H N+V+L  Y L  +   +V E++  G L   L +      W  + 
Sbjct: 68  QEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNIL---MDENR--CAK 168
            +  DIA GI Y+ ++    I+H D++  NI    +DEN   CAK
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAK 169

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27  KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           +I DG     +++G GS GTVYKG       V +  +     ++ + F+ E+ V+ +T H
Sbjct: 24  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 83
Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
            N++  +GYS +    I V ++    SL   L   E +   I+   IAR  A+G+ YLH 
Sbjct: 84  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
           +    IIH D+K  NI + E+   K
Sbjct: 143 KS---IIHRDLKSNNIFLHEDLTVK 164

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 20  FSYAELKKITDG---FKEKVGRGSSGTVYKGAMI-NRQLVAVNRL-------EKVLDERE 68
           F  + L  + D    +++++G+G  G V+KG ++ ++ +VA+  L       E  + E+ 
Sbjct: 8   FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 69  REFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT 128
           +EFQ E+ ++   +H N+V+L  Y L  +   +V E++  G L   L +      W  + 
Sbjct: 68  QEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNIL---MDENR--CAK 168
            +  DIA GI Y+ ++    I+H D++  NI    +DEN   CAK
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAK 169

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27  KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           +I DG     +++G GS GTVYKG       V +  +     ++ + F+ E+ V+ +T H
Sbjct: 32  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
            N++  +GYS +    I V ++    SL   L   E +   I+   IAR  A+G+ YLH 
Sbjct: 92  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
           +    IIH D+K  NI + E+   K
Sbjct: 151 KS---IIHRDLKSNNIFLHEDLTVK 172

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27  KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           +I DG     +++G GS GTVYKG       V +  +     ++ + F+ E+ V+ +T H
Sbjct: 31  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 90
Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
            N++  +GYS +    I V ++    SL   L   E +   I+   IAR  A+G+ YLH 
Sbjct: 91  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
           +    IIH D+K  NI + E+   K
Sbjct: 150 KS---IIHRDLKSNNIFLHEDLTVK 171

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 20  FSYAELKKITDG---FKEKVGRGSSGTVYKGAMI-NRQLVAVNRL-------EKVLDERE 68
           F  + L  + D    +++++G+G  G V+KG ++ ++ +VA+  L       E  + E+ 
Sbjct: 8   FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 69  REFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT 128
           +EFQ E+ ++   +H N+V+L  Y L  +   +V E++  G L   L +      W  + 
Sbjct: 68  QEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNIL---MDENR--CAK 168
            +  DIA GI Y+ ++    I+H D++  NI    +DEN   CAK
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAK 169

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27  KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           +I DG     +++G GS GTVYKG       V +  +     ++ + F+ E+ V+ +T H
Sbjct: 32  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
            N++  +GYS +    I V ++    SL   L   E +   I+   IAR  A+G+ YLH 
Sbjct: 92  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
           +    IIH D+K  NI + E+   K
Sbjct: 151 KS---IIHRDLKSNNIFLHEDLTVK 172

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    M N      VAV  L +V  E+ E +F  E  +I + +H+N+VR
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
            +G SL+   + ++ E M+ G L   L     +P+       ++   +ARDIA G  YL 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 159 ---ENHFIHRDIAARNCLL 174

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
           EL        + VG G  G V  G +     +++ VA+  L+    E++R +F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
           G+  H N++RL G   +    ++V EYM NGSL   L   + Q   I+  G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
            YL D      +H D+  +NIL++ N   K
Sbjct: 161 KYLSD---MGFVHRDLAARNILINSNLVCK 187

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    M N      VAV  L +V  E+ E +F  E  +I + +H+N+VR
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
            +G SL+   + ++ E M+ G L   L     +P+       ++   +ARDIA G  YL 
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 173 ---ENHFIHRDIAARNCLL 188

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    M N      VAV  L +V  E+ E +F  E  +I + +H+N+VR
Sbjct: 55  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
            +G SL+   + ++ E M+ G L   L     +P+       ++   +ARDIA G  YL 
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 175 ---ENHFIHRDIAARNCLL 190

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    M N      VAV  L +V  E+ E +F  E  +I + +H+N+VR
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
            +G SL+   + ++ E M+ G L   L     +P+       ++   +ARDIA G  YL 
Sbjct: 98  CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 158 ---ENHFIHRDIAARNCLL 173

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    M N      VAV  L +V  E+ E +F  E  +I + +H+N+VR
Sbjct: 56  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
            +G SL+   + ++ E M+ G L   L     +P+       ++   +ARDIA G  YL 
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 176 ---ENHFIHRDIAARNCLL 191

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 36  VGRGSSGTVYKGAMINRQ-----LVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRL 89
           +G G  G VYKG +          VA+  L+    E++R +F  E  ++G+  H N++RL
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
            G   +    +++ EYM NG+L   L   + + + ++  G+ R IA G+ YL +      
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNY 168
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D+  +NIL++ N   K
Sbjct: 169 VHRDLAARNILVNSNLVCK 187

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    M N      VAV  L +V  E+ E +F  E  +I + +H+N+VR
Sbjct: 45  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
            +G SL+   + ++ E M+ G L   L     +P+       ++   +ARDIA G  YL 
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 165 ---ENHFIHRDIAARNCLL 180

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    M N      VAV  L +V  E+ E +F  E  +I + +H+N+VR
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
            +G SL+   + ++ E M+ G L   L     +P+       ++   +ARDIA G  YL 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 159 ---ENHFIHRDIAARNCLL 174

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    M N      VAV  L +V  E+ E +F  E  +I + +H+N+VR
Sbjct: 79  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
            +G SL+   + ++ E M+ G L   L     +P+       ++   +ARDIA G  YL 
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 199 ---ENHFIHRDIAARNCLL 214

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    M N      VAV  L +V  E+ E +F  E  +I + +H+N+VR
Sbjct: 30  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
            +G SL+   + ++ E M+ G L   L     +P+       ++   +ARDIA G  YL 
Sbjct: 90  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 150 ---ENHFIHRDIAARNCLL 165

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    M N      VAV  L +V  E+ E +F  E  +I + +H+N+VR
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
            +G SL+   + ++ E M+ G L   L     +P+       ++   +ARDIA G  YL 
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 173 ---ENHFIHRDIAARNCLL 188

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    M N      VAV  L +V  E+ E +F  E  +I + +H+N+VR
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
            +G SL+   + ++ E M+ G L   L     +P+       ++   +ARDIA G  YL 
Sbjct: 98  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 158 ---ENHFIHRDIAARNCLL 173

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    M N      VAV  L +V  E+ E +F  E  +I + +H+N+VR
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
            +G SL+   + ++ E M+ G L   L     +P+       ++   +ARDIA G  YL 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 159 ---ENHFIHRDIAARNCLL 174

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
           EL        + VG G  G V  G +     +++ VA+  L+    E++R +F  E  ++
Sbjct: 12  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
           G+  H N++RL G   +    ++V EYM NGSL   L   + Q   I+  G+ R IA G+
Sbjct: 72  GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 131
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
            YL D      +H D+  +NIL++ N   K
Sbjct: 132 KYLSD---MGYVHRDLAARNILINSNLVCK 158

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    M N      VAV  L +V  E+ E +F  E  +I + +H+N+VR
Sbjct: 65  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
            +G SL+   + ++ E M+ G L   L     +P+       ++   +ARDIA G  YL 
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 185 ---ENHFIHRDIAARNCLL 200

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
           EL        + VG G  G V  G +     +++ VA+  L+    E++R +F  E  ++
Sbjct: 29  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
           G+  H N++RL G   +    ++V EYM NGSL   L   + Q   I+  G+ R IA G+
Sbjct: 89  GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 148
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
            YL D      +H D+  +NIL++ N   K
Sbjct: 149 KYLSD---MGYVHRDLAARNILINSNLVCK 175

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
           EL        + VG G  G V  G +     +++ VA+  L+    E++R +F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
           G+  H N++RL G   +    ++V EYM NGSL   L   + Q   I+  G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
            YL D      +H D+  +NIL++ N   K
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCK 187

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
           EL        + VG G  G V  G +     +++ VA+  L+    E++R +F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
           G+  H N++RL G   +    ++V EYM NGSL   L   + Q   I+  G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
            YL D      +H D+  +NIL++ N   K
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCK 187

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
           EL        + VG G  G V  G +     +++ VA+  L+    E++R +F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
           G+  H N++RL G   +    ++V EYM NGSL   L   + Q   I+  G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
            YL D      +H D+  +NIL++ N   K
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCK 187

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
           EL        + VG G  G V  G +     +++ VA+  L+    E++R +F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
           G+  H N++RL G   +    ++V EYM NGSL   L   + Q   I+  G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
            YL D      +H D+  +NIL++ N   K
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCK 187

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
           EL        + VG G  G V  G +     +++ VA+  L+    E++R +F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
           G+  H N++RL G   +    ++V EYM NGSL   L   + Q   I+  G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
            YL D      +H D+  +NIL++ N   K
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCK 187

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
           EL        + VG G  G V  G +     +++ VA+  L+    E++R +F  E  ++
Sbjct: 39  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
           G+  H N++RL G   +    ++V EYM NGSL   L   + Q   I+  G+ R IA G+
Sbjct: 99  GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 158
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
            YL D      +H D+  +NIL++ N   K
Sbjct: 159 KYLSD---MGYVHRDLAARNILINSNLVCK 185

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
           +G G+ G VY+G    M N      VAV  L +V  E+ E +F  E  +I + +H+N+VR
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
            +G SL+   + ++ E M+ G L   L     +P+       ++   +ARDIA G  YL 
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 143 DECETQIIHCDIKPQNILM 161
              E   IH DI  +N L+
Sbjct: 173 ---ENHFIHRDIAARNCLL 188

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 33  KEKVGRGSSGTVYKGAMI---NRQL-VAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLV 87
           ++ +G G  G V  G +     R++ VA+  L+    E++R +F +E  ++G+  H N++
Sbjct: 38  EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
            L G   + +  +++ E+M NGSL   L   + Q   I+  G+ R IA G+ YL D    
Sbjct: 98  HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---M 154
Query: 148 QIIHCDIKPQNILMDENRCAK 168
             +H D+  +NIL++ N   K
Sbjct: 155 NYVHRDLAARNILVNSNLVCK 175

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 22  YAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRT 81
           Y E++        ++G GS GTVYKG       V + ++     E+ + F+ E+ V+ +T
Sbjct: 30  YWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
            H N++  +GY  + +  I V ++    SL   L   E +    +   IAR  A+G+ YL
Sbjct: 90  RHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 148
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
           H +    IIH D+K  NI + E    K
Sbjct: 149 HAK---NIIHRDMKSNNIFLHEGLTVK 172

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 17/170 (10%)
Query: 13  TLTTPFSF-----SYAELKKITDG----FKEKVGRGSSGTVYKGAMI---NRQL-VAVNR 59
           T   PF+F     +  E  K  D      ++ +G G  G V  G +     R++ VA+  
Sbjct: 5   TFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKT 64
Query: 60  LEK-VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNA 118
           L+    D++ R+F +E  ++G+  H N++ L G   +    +++ EYM NGSL   L   
Sbjct: 65  LKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN 124
Query: 119 EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + +   I+  G+ R I  G+ YL D      +H D+  +NIL++ N   K
Sbjct: 125 DGRFTVIQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCK 171

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 52  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ YL    
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 168
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVK 191

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 29  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ YL    
Sbjct: 89  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 145
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVK 168

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 32  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ YL    
Sbjct: 92  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 148
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVK 171

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 26  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ YL  + 
Sbjct: 86  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK- 144
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 145 --KFVHRDLAARNCMLDEKFTVK 165

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 53  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ YL    
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 169
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 170 SKKFVHRDLAARNCMLDEKFTVK 192

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 31  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ YL    
Sbjct: 91  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 147
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVK 170

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 33  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ YL    
Sbjct: 93  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 149
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVK 172

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 34  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ YL    
Sbjct: 94  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 150
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVK 173

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 33  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ YL    
Sbjct: 93  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 149
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVK 172

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 34  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ YL    
Sbjct: 94  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 150
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVK 173

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 21/140 (15%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLD-----EREREFQTEIKVIGRTHHRNLV 87
           +++G+GS G VYKG     +++VA+    K++D     +   + Q EI V+ +     + 
Sbjct: 25  DRIGKGSFGEVYKGIDNHTKEVVAI----KIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDE 144
           R  G  L+ +K  ++ EY+  GS  D+L     +P  +E T IA   R+I +G+ YLH E
Sbjct: 81  RYFGSYLKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHSE 135
Query: 145 CETQIIHCDIKPQNILMDEN 164
            +   IH DIK  N+L+ E 
Sbjct: 136 RK---IHRDIKAANVLLSEQ 152

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
           EL        + VG G  G V  G +     +++ VA+  L+    E++R +F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
           G+  H N++RL G   +    ++V E M NGSL   L   + Q   I+  G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
            YL D      +H D+  +NIL++ N   K
Sbjct: 161 KYLSD---MGAVHRDLAARNILINSNLVCK 187

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
           EL        + VG G  G V  G +     +++ VA+  L+    E++R +F  E  ++
Sbjct: 12  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
           G+  H N++RL G   +    ++V E M NGSL   L   + Q   I+  G+ R IA G+
Sbjct: 72  GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 131
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
            YL D      +H D+  +NIL++ N   K
Sbjct: 132 KYLSD---MGYVHRDLAARNILINSNLVCK 158

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
           EL        + VG G  G V  G +     +++ VA+  L+    E++R +F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79  GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
           G+  H N++RL G   +    ++V E M NGSL   L   + Q   I+  G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
            YL D      +H D+  +NIL++ N   K
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCK 187

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 34  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ +L    
Sbjct: 94  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 150
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVK 173

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 39  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ +L    
Sbjct: 99  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 155
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVK 178

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 34  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ +L    
Sbjct: 94  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 150
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVK 173

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 36  VGRGSSGTVYKGAMI---NRQL-VAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRLL 90
           +G G  G V  G +     R+L VA+  L+    E++R +F  E  ++G+  H N++ L 
Sbjct: 30  IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G   +    ++V EYM NGSL   L   + Q   I+  G+ R I+ G+ YL D      +
Sbjct: 90  GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSD---MGYV 146
Query: 151 HCDIKPQNILMDENRCAK 168
           H D+  +NIL++ N   K
Sbjct: 147 HRDLAARNILINSNLVCK 164

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 35  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ +L    
Sbjct: 95  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 151
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVK 174

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 93  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ +L    
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 209
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVK 232

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 35  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ +L    
Sbjct: 95  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 151
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVK 174

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 32  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 87  VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      ++V  YM +G L + + N    P   +  G    +A+G+ +L    
Sbjct: 92  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 148
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVK 171

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
            K ++G G+ G V+     N      + LVAV  L+   D   ++F  E +++    H +
Sbjct: 17  LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSL--------ADILFNAEKQP----NWIERTGIARD 133
           +V+  G  +E    I+V+EYM +G L         D +  AE  P       +   IA+ 
Sbjct: 77  IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 134 IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           IA G++YL  +     +H D+  +N L+ EN   K
Sbjct: 137 IAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 36  VGRGSSGTVYKGAMI---NRQL-VAVNRLEK-VLDEREREFQTEIKVIGRTHHRNLVRLL 90
           +G G  G V  G +     R++ VA+  L+    D++ R+F +E  ++G+  H N++ L 
Sbjct: 16  IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G   +    +++ EYM NGSL   L   + +   I+  G+ R I  G+ YL D      +
Sbjct: 76  GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYV 132
Query: 151 HCDIKPQNILMDENRCAK 168
           H D+  +NIL++ N   K
Sbjct: 133 HRDLAARNILVNSNLVCK 150

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 36  VGRGSSGTVYKGAMI---NRQL-VAVNRLEK-VLDEREREFQTEIKVIGRTHHRNLVRLL 90
           +G G  G V  G +     R++ VA+  L+    D++ R+F +E  ++G+  H N++ L 
Sbjct: 22  IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G   +    +++ EYM NGSL   L   + +   I+  G+ R I  G+ YL D      +
Sbjct: 82  GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYV 138
Query: 151 HCDIKPQNILMDENRCAK 168
           H D+  +NIL++ N   K
Sbjct: 139 HRDLAARNILVNSNLVCK 156

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 33  KEKVGRGSSGTVYKGAMI---NRQL-VAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLV 87
           ++ +G G  G V  G +     R++ VA+  L+    E++R +F +E  ++G+  H N++
Sbjct: 12  EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
            L G   + +  +++ E+M NGSL   L   + Q   I+  G+ R IA G+ YL D    
Sbjct: 72  HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---M 128
Query: 148 QIIHCDIKPQNILMDENRCAK 168
             +H  +  +NIL++ N   K
Sbjct: 129 NYVHRALAARNILVNSNLVCK 149

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 23/141 (16%)
Query: 34  EKVGRGSSGTVYKGAMINR--QLVAVNRLEKVLD-----EREREFQTEIKVIGRTHHRNL 86
           EK+G+GS G V+KG + NR  ++VA+    K++D     +   + Q EI V+ +     +
Sbjct: 13  EKIGKGSFGEVFKG-IDNRTQKVVAI----KIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHD 143
            +  G  L+ +K  ++ EY+  GS  D+L     +P  ++ T IA   R+I +G+ YLH 
Sbjct: 68  TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 122
Query: 144 ECETQIIHCDIKPQNILMDEN 164
           E   + IH DIK  N+L+ E+
Sbjct: 123 E---KKIHRDIKAANVLLSEH 140

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 23/141 (16%)
Query: 34  EKVGRGSSGTVYKGAMINR--QLVAVNRLEKVLD-----EREREFQTEIKVIGRTHHRNL 86
           EK+G+GS G V+KG + NR  ++VA+    K++D     +   + Q EI V+ +     +
Sbjct: 13  EKIGKGSFGEVFKG-IDNRTQKVVAI----KIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHD 143
            +  G  L+ +K  ++ EY+  GS  D+L     +P  ++ T IA   R+I +G+ YLH 
Sbjct: 68  TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 122
Query: 144 ECETQIIHCDIKPQNILMDEN 164
           E   + IH DIK  N+L+ E+
Sbjct: 123 E---KKIHRDIKAANVLLSEH 140

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 23/141 (16%)
Query: 34  EKVGRGSSGTVYKGAMINR--QLVAVNRLEKVLD-----EREREFQTEIKVIGRTHHRNL 86
           EK+G+GS G V+KG + NR  ++VA+    K++D     +   + Q EI V+ +     +
Sbjct: 28  EKIGKGSFGEVFKG-IDNRTQKVVAI----KIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHD 143
            +  G  L+ +K  ++ EY+  GS  D+L     +P  ++ T IA   R+I +G+ YLH 
Sbjct: 83  TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 137
Query: 144 ECETQIIHCDIKPQNILMDEN 164
           E +   IH DIK  N+L+ E+
Sbjct: 138 EKK---IHRDIKAANVLLSEH 155

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 23/141 (16%)
Query: 34  EKVGRGSSGTVYKGAMINR--QLVAVNRLEKVLD-----EREREFQTEIKVIGRTHHRNL 86
           EK+G+GS G V+KG + NR  ++VA+    K++D     +   + Q EI V+ +     +
Sbjct: 33  EKIGKGSFGEVFKG-IDNRTQKVVAI----KIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHD 143
            +  G  L+ +K  ++ EY+  GS  D+L     +P  ++ T IA   R+I +G+ YLH 
Sbjct: 88  TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 142
Query: 144 ECETQIIHCDIKPQNILMDEN 164
           E   + IH DIK  N+L+ E+
Sbjct: 143 E---KKIHRDIKAANVLLSEH 160

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 65/148 (43%), Gaps = 20/148 (13%)
Query: 22  YAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE----FQTEIKV 77
           +AEL       +E +G G  G VY+   I  + VAV       DE   +     + E K+
Sbjct: 6   FAELT-----LEEIIGIGGFGKVYRAFWIGDE-VAVKAARHDPDEDISQTIENVRQEAKL 59
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP----NWIERTGIARD 133
                H N++ L G  L+     LV E+   G L  +L      P    NW      A  
Sbjct: 60  FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQ 113
Query: 134 IARGILYLHDECETQIIHCDIKPQNILM 161
           IARG+ YLHDE    IIH D+K  NIL+
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILI 141

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 14  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  N +    +A  I+  + YL
Sbjct: 73  HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVK 156

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 9   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  N +    +A  I+  + YL
Sbjct: 68  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVK 151

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 14  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  N +    +A  I+  + YL
Sbjct: 73  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVK 156

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 36  VGRGSSGTVYKGAMI---NRQL-VAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRLL 90
           +G G  G V  G +     R + VA+  L+    E++R +F  E  ++G+  H N+V L 
Sbjct: 51  IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G        ++V E+M NG+L   L   + Q   I+  G+ R IA G+ YL D      +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLAD---MGYV 167
Query: 151 HCDIKPQNILMDENRCAK 168
           H D+  +NIL++ N   K
Sbjct: 168 HRDLAARNILVNSNLVCK 185

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 13  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 71
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  N +    +A  I+  + YL
Sbjct: 72  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 132 EKK---NFIHRDLAARNCLVGENHLVK 155

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 9   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  N +    +A  I+  + YL
Sbjct: 68  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVK 151

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 22  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 80
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  N +    +A  I+  + YL
Sbjct: 81  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 140
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 141 EKK---NFIHRDLAARNCLVGENHLVK 164

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 14  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  N +    +A  I+  + YL
Sbjct: 73  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVK 156

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 10  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 68
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  N +    +A  I+  + YL
Sbjct: 69  HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 129 EKK---NFIHRDLAARNCLVGENHLVK 152

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 14  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  N +    +A  I+  + YL
Sbjct: 73  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVK 156

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 10  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 68
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  N +    +A  I+  + YL
Sbjct: 69  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 129 EKK---NFIHRDLAARNCLVGENHLVK 152

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 11  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 69
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  N +    +A  I+  + YL
Sbjct: 70  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVK 153

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 11  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 69
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  N +    +A  I+  + YL
Sbjct: 70  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVK 153

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 11  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 69
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  N +    +A  I+  + YL
Sbjct: 70  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVK 153

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 32  FKEKVGRGSSGTVYKGAMIN---RQLVAVNRL-EKVLDEREREFQTEIKVIGRT-HHRNL 86
           F++ +G G+ G V K  +     R   A+ R+ E    +  R+F  E++V+ +  HH N+
Sbjct: 19  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNA---EKQPNWI------------ERTGIA 131
           + LLG         L  EY  +G+L D L  +   E  P +             +    A
Sbjct: 79  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            D+ARG+ YL    + Q IH D+  +NIL+ EN  AK
Sbjct: 139 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAK 172

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 32  FKEKVGRGSSGTVYKGAMIN---RQLVAVNRL-EKVLDEREREFQTEIKVIGRT-HHRNL 86
           F++ +G G+ G V K  +     R   A+ R+ E    +  R+F  E++V+ +  HH N+
Sbjct: 29  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNA---EKQPNWI------------ERTGIA 131
           + LLG         L  EY  +G+L D L  +   E  P +             +    A
Sbjct: 89  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            D+ARG+ YL    + Q IH D+  +NIL+ EN  AK
Sbjct: 149 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAK 182

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 2   PVKYKIDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRL 60
           P  Y +  NY            E+++     K K+G G  G VY+G      L VAV  L
Sbjct: 242 PTVYGVSPNYDKW---------EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL 292
Query: 61  EKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEK 120
           ++   E E EF  E  V+    H NLV+LLG         ++ E+M+ G+L D L    +
Sbjct: 293 KEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 351
Query: 121 QP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           Q  N +    +A  I+  + YL  +     IH ++  +N L+ EN   K
Sbjct: 352 QEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVK 397

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 16/159 (10%)
Query: 15  TTPFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDERER 69
           + P  F    LK     F +++G+G+ G+V    Y     N  ++VAV +L+   +E  R
Sbjct: 2   SDPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 56
Query: 70  EFQTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER 127
           +F+ EI+++    H N+V+  G  YS       L+ EY+  GSL D L   +++ + I+ 
Sbjct: 57  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 128 TGIARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
                 I +G+ YL  +   + IH D+  +NIL++ ENR
Sbjct: 117 LQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 16/159 (10%)
Query: 15  TTPFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDERER 69
           + P  F    LK     F +++G+G+ G+V    Y     N  ++VAV +L+   +E  R
Sbjct: 2   SDPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 56
Query: 70  EFQTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER 127
           +F+ EI+++    H N+V+  G  YS       L+ EY+  GSL D L   +++ + I+ 
Sbjct: 57  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 128 TGIARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
                 I +G+ YL  +   + IH D+  +NIL++ ENR
Sbjct: 117 LQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK     F +++G+G+ G+V    Y     N  ++VAV +L+   +E  R+F
Sbjct: 3   PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 57
Query: 72  QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
           + EI+++    H N+V+  G  YS       L+ EY+  GSL D L   +++ + I+   
Sbjct: 58  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 117
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
               I +G+ YL  +   + IH D+  +NIL++ ENR
Sbjct: 118 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 151

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK     F +++G+G+ G+V    Y     N  ++VAV +L+   +E  R+F
Sbjct: 7   PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 72  QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
           + EI+++    H N+V+  G  YS       L+ EY+  GSL D L   +++ + I+   
Sbjct: 62  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 121
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
               I +G+ YL  +   + IH D+  +NIL++ ENR
Sbjct: 122 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 155

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK     F +++G+G+ G+V    Y     N  ++VAV +L+   +E  R+F
Sbjct: 2   PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 56
Query: 72  QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
           + EI+++    H N+V+  G  YS       L+ EY+  GSL D L   +++ + I+   
Sbjct: 57  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 116
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
               I +G+ YL  +   + IH D+  +NIL++ ENR
Sbjct: 117 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 150

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK     F +++G+G+ G+V    Y     N  ++VAV +L+   +E  R+F
Sbjct: 10  PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 64
Query: 72  QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
           + EI+++    H N+V+  G  YS       L+ EY+  GSL D L   +++ + I+   
Sbjct: 65  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 124
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
               I +G+ YL  +   + IH D+  +NIL++ ENR
Sbjct: 125 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 158

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK     F +++G+G+ G+V    Y     N  ++VAV +L+   +E  R+F
Sbjct: 9   PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 63
Query: 72  QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
           + EI+++    H N+V+  G  YS       L+ EY+  GSL D L   +++ + I+   
Sbjct: 64  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 123
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
               I +G+ YL  +   + IH D+  +NIL++ ENR
Sbjct: 124 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 157

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK     F +++G+G+ G+V    Y     N  ++VAV +L+   +E  R+F
Sbjct: 35  PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 89
Query: 72  QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
           + EI+++    H N+V+  G  YS       L+ EY+  GSL D L   +++ + I+   
Sbjct: 90  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 149
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
               I +G+ YL  +   + IH D+  +NIL++ ENR
Sbjct: 150 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 183

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 14  LTTPFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDERE 68
           +  P  F    LK     F +++G+G+ G+V    Y     N  ++VAV +L+   +E  
Sbjct: 1   MRDPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 55
Query: 69  REFQTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIE 126
           R+F+ EI+++    H N+V+  G  YS       L+ EY+  GSL D L   +++ + I+
Sbjct: 56  RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 115
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
                  I +G+ YL  +   + IH D+  +NIL++ ENR
Sbjct: 116 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK     F +++G+G+ G+V    Y     N  ++VAV +L+   +E  R+F
Sbjct: 11  PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 65
Query: 72  QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
           + EI+++    H N+V+  G  YS       L+ EY+  GSL D L   +++ + I+   
Sbjct: 66  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 125
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
               I +G+ YL  +   + IH D+  +NIL++ ENR
Sbjct: 126 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 159

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK     F +++G+G+ G+V    Y     N  ++VAV +L+   +E  R+F
Sbjct: 8   PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 62
Query: 72  QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
           + EI+++    H N+V+  G  YS       L+ EY+  GSL D L   +++ + I+   
Sbjct: 63  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 122
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
               I +G+ YL  +   + IH D+  +NIL++ ENR
Sbjct: 123 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 156

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 9   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  + +    +A  I+  + YL
Sbjct: 68  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVK 151

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 9   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  + +    +A  I+  + YL
Sbjct: 68  HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVK 151

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 7   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  + +    +A  I+  + YL
Sbjct: 66  HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVK 149

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 14  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  + +    +A  I+  + YL
Sbjct: 73  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVK 156

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 9   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  + +    +A  I+  + YL
Sbjct: 68  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVK 151

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 9   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  + +    +A  I+  + YL
Sbjct: 68  HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVK 151

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 32  FKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL 86
           F +++G+G+ G+V    Y     N  ++VAV +L+   +E  R+F+ EI+++    H N+
Sbjct: 32  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 87  VRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
           V+  G  YS       L+ EY+  GSL D L   +++ + I+       I +G+ YL  +
Sbjct: 92  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 145 CETQIIHCDIKPQNILMD-ENR 165
              + IH D+  +NIL++ ENR
Sbjct: 152 ---RYIHRDLATRNILVENENR 170

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           EK+G+G+SGTVY    +   Q VA+ ++      ++     EI V+    + N+V  L  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            L   +  +V EY++ GSL D++         I    + R+  + + +LH     Q+IH 
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLHS---NQVIHR 140
Query: 153 DIKPQNILM 161
           DIK  NIL+
Sbjct: 141 DIKSDNILL 149

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           EK+G+G+SGTVY    +   Q VA+ ++      ++     EI V+    + N+V  L  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            L   +  +V EY++ GSL D++         I    + R+  + + +LH     Q+IH 
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLHS---NQVIHR 140
Query: 153 DIKPQNILM 161
           DIK  NIL+
Sbjct: 141 DIKSDNILL 149

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 32  FKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL 86
           F +++G+G+ G+V    Y     N  ++VAV +L+   +E  R+F+ EI+++    H N+
Sbjct: 32  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 87  VRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
           V+  G  YS       L+ EY+  GSL D L   +++ + I+       I +G+ YL  +
Sbjct: 92  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 145 CETQIIHCDIKPQNILMD-ENR 165
              + IH D+  +NIL++ ENR
Sbjct: 152 ---RYIHRDLATRNILVENENR 170

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 7   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  + +    +A  I+  + YL
Sbjct: 66  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVK 149

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           EK+G+G+SGTVY    +   Q VA+ ++      ++     EI V+    + N+V  L  
Sbjct: 27  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            L   +  +V EY++ GSL D++         I    + R+  + + +LH     Q+IH 
Sbjct: 87  YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLHS---NQVIHR 141
Query: 153 DIKPQNILM 161
           DIK  NIL+
Sbjct: 142 DIKSDNILL 150

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           EK+G+G+SGTVY    +   Q VA+ ++      ++     EI V+    + N+V  L  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            L   +  +V EY++ GSL D++         I    + R+  + + +LH     Q+IH 
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLHS---NQVIHR 140
Query: 153 DIKPQNILM 161
           DIK  NIL+
Sbjct: 141 DIKSDNILL 149

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY+G      L VAV  L++   E E EF  E  V+    
Sbjct: 7   EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
           H NLV+LLG         ++ E+M+ G+L D L    +Q  + +    +A  I+  + YL
Sbjct: 66  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
             +     IH D+  +N L+ EN   K
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVK 149

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 16/157 (10%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK     F +++G+G+ G+V    Y     N  ++VAV +L+   +E  R+F
Sbjct: 7   PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 72  QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
           + EI+++    H N+V+  G  YS       L+ EY+  GSL D L    ++ + I+   
Sbjct: 62  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQ 121
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
               I +G+ YL  +   + IH D+  +NIL++ ENR
Sbjct: 122 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 155

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 16/151 (10%)
Query: 34  EKVGRGSSGTVY--KGAMINRQLVAVNRLEKVLDERERE-----FQTEIKVIGRTHHRNL 86
           +K+G G   TVY  +  ++N + VA+  +   +  RE+E     F+ E+    +  H+N+
Sbjct: 17  DKLGGGGMSTVYLAEDTILNIK-VAIKAI--FIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLHDEC 145
           V ++    E     LV EY+   +L++  +     P  ++        I  GI + HD  
Sbjct: 74  VSMIDVDEEDDCYYLVMEYIEGPTLSE--YIESHGPLSVDTAINFTNQILDGIKHAHD-- 129
Query: 146 ETQIIHCDIKPQNILMDENRCAKNFRLWIGK 176
             +I+H DIKPQNIL+D N+  K F   I K
Sbjct: 130 -MRIVHRDIKPQNILIDSNKTLKIFDFGIAK 159

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 16/158 (10%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIK 76
           P+     E+ + T    E++G G +G V+ G       VAV  L K        F  E  
Sbjct: 2   PWWEDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEAN 60
Query: 77  VIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GI 130
           ++ +  H+ LVRL  Y++   + I ++ EYM NGSL D L    K P+ I+ T      +
Sbjct: 61  LMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDM 114
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           A  IA G+ ++    E   IH D++  NIL+ +    K
Sbjct: 115 AAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCK 149

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 2   PVKYKIDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRL 60
           P  Y +  NY            E+++     K K+G G  G VY+G      L VAV  L
Sbjct: 203 PTIYGVSPNYDKW---------EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL 253
Query: 61  EKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEK 120
           ++   E E EF  E  V+    H NLV+LLG         ++ E+M+ G+L D L    +
Sbjct: 254 KEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 312
Query: 121 QP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           Q  + +    +A  I+  + YL  +     IH ++  +N L+ EN   K
Sbjct: 313 QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVK 358

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
           E+++     K K+G G  G VY G      L VAV  L++   E E EF  E  V+    
Sbjct: 28  EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 86
Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGI-----ARDIARG 137
           H NLV+LLG         +V EYM  G+L D L    ++    E T +     A  I+  
Sbjct: 87  HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE----EVTAVVLLYMATQISSA 142
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + YL  +     IH D+  +N L+ EN   K
Sbjct: 143 MEYLEKK---NFIHRDLAARNCLVGENHVVK 170

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 32  FKEKVGRGSSGTVYKGAMIN---RQLVAVNRL-EKVLDEREREFQTEIKVIGRT-HHRNL 86
           F++ +G G+ G V K  +     R   A+ R+ E    +  R+F  E++V+ +  HH N+
Sbjct: 26  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNA---EKQPNWI------------ERTGIA 131
           + LLG         L  EY  +G+L D L  +   E  P +             +    A
Sbjct: 86  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            D+ARG+ YL    + Q IH ++  +NIL+ EN  AK
Sbjct: 146 ADVARGMDYLS---QKQFIHRNLAARNILVGENYVAK 179

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 17/138 (12%)
Query: 34  EKVGRGSSGTVYKGAMINR--QLVAVNRLEKVLD-----EREREFQTEIKVIGRTHHRNL 86
           E++G+GS G V+KG + NR  Q+VA+    K++D     +   + Q EI V+ +     +
Sbjct: 29  ERIGKGSFGEVFKG-IDNRTQQVVAI----KIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
            +  G  L+ SK  ++ EY+  GS  D+L       +  +   + ++I +G+ YLH E +
Sbjct: 84  TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKGLDYLHSEKK 141
Query: 147 TQIIHCDIKPQNILMDEN 164
              IH DIK  N+L+ E 
Sbjct: 142 ---IHRDIKAANVLLSEQ 156

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK     F +++G+G+ G+V    Y     N  ++VAV +L+   +E  R+F
Sbjct: 5   PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 59
Query: 72  QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
           + EI+++    H N+V+  G  YS       L+ EY+  GSL D L   +++ + I+   
Sbjct: 60  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 119
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
               I +G+ YL  +   + IH ++  +NIL++ ENR
Sbjct: 120 YTSQICKGMEYLGTK---RYIHRNLATRNILVENENR 153

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           EK+G+G+SGTVY    +   Q VA+ ++      ++     EI V+    + N+V  L  
Sbjct: 27  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            L   +  +V EY++ GSL D++         I    + R+  + + +LH     Q+IH 
Sbjct: 87  YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLHS---NQVIHR 141
Query: 153 DIKPQNILM 161
           +IK  NIL+
Sbjct: 142 NIKSDNILL 150

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           E+ + T    E++G G  G V+ G       VAV  L K        F  E  ++ +  H
Sbjct: 18  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 76
Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
           + LVRL  Y++   + I ++ EYM NGSL D L    K P+ I+ T      +A  IA G
Sbjct: 77  QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 130
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + ++    E   IH D++  NIL+ +    K
Sbjct: 131 MAFIE---ERNYIHRDLRAANILVSDTLSCK 158

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           E+ + T    E++G G  G V+ G       VAV  L++        F  E  ++ +  H
Sbjct: 4   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQH 62
Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
           + LVRL  Y++   + I ++ EYM NGSL D L    K P+ I+ T      +A  IA G
Sbjct: 63  QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 116
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + ++    E   IH D++  NIL+ +    K
Sbjct: 117 MAFIE---ERNYIHRDLRAANILVSDTLSCK 144

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           E+ + T    E++G G  G V+ G       VAV  L K        F  E  ++ +  H
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
           + LVRL  Y++   + I ++ EYM NGSL D L    K P+ I+ T      +A  IA G
Sbjct: 68  QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 121
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + ++    E   IH D++  NIL+ +    K
Sbjct: 122 MAFIE---ERNYIHRDLRAANILVSDTLSCK 149

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           E+ + T    E++G G  G V+ G       VAV  L K        F  E  ++ +  H
Sbjct: 14  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 72
Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
           + LVRL  Y++   + I ++ EYM NGSL D L    K P+ I+ T      +A  IA G
Sbjct: 73  QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 126
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + ++    E   IH D++  NIL+ +    K
Sbjct: 127 MAFIE---ERNYIHRDLRAANILVSDTLSCK 154

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           E+ + T    E++G G  G V+ G       VAV  L++        F  E  ++ +  H
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQH 67
Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
           + LVRL  Y++   + I ++ EYM NGSL D L    K P+ I+ T      +A  IA G
Sbjct: 68  QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 121
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + ++    E   IH D++  NIL+ +    K
Sbjct: 122 MAFIE---ERNYIHRDLRAANILVSDTLSCK 149

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           E+ + T    E++G G  G V+ G       VAV  L K        F  E  ++ +  H
Sbjct: 15  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 73
Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
           + LVRL  Y++   + I ++ EYM NGSL D L    K P+ I+ T      +A  IA G
Sbjct: 74  QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 127
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + ++    E   IH D++  NIL+ +    K
Sbjct: 128 MAFIE---ERNYIHRDLRAANILVSDTLSCK 155

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           E+ + T    E++G G  G V+ G       VAV  L++        F  E  ++ +  H
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQH 67
Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
           + LVRL  Y++   + I ++ EYM NGSL D L    K P+ I+ T      +A  IA G
Sbjct: 68  QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 121
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + ++    E   IH D++  NIL+ +    K
Sbjct: 122 MAFIE---ERNYIHRDLRAANILVSDTLSCK 149

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           E+ + T    E++G G  G V+ G       VAV  L K        F  E  ++ +  H
Sbjct: 17  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 75
Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
           + LVRL  Y++   + I ++ EYM NGSL D L    K P+ I+ T      +A  IA G
Sbjct: 76  QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 129
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + ++    E   IH D++  NIL+ +    K
Sbjct: 130 MAFIE---ERNYIHRDLRAANILVSDTLSCK 157

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           E+ + T    E++G G  G V+ G       VAV  L++        F  E  ++ +  H
Sbjct: 11  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQH 69
Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
           + LVRL  Y++   + I ++ EYM NGSL D L    K P+ I+ T      +A  IA G
Sbjct: 70  QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 123
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + ++    E   IH D++  NIL+ +    K
Sbjct: 124 MAFIE---ERNYIHRDLRAANILVSDTLSCK 151

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           E+ + T    E++G G  G V+ G       VAV  L++        F  E  ++ +  H
Sbjct: 10  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQH 68
Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
           + LVRL  Y++   + I ++ EYM NGSL D L    K P+ I+ T      +A  IA G
Sbjct: 69  QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 122
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + ++    E   IH D++  NIL+ +    K
Sbjct: 123 MAFIE---ERNYIHRDLRAANILVSDTLSCK 150

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           E+ + T    E++G G  G V+ G       VAV  L K        F  E  ++ +  H
Sbjct: 15  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 73
Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
           + LVRL  Y++   + I ++ EYM NGSL D L    K P+ I+ T      +A  IA G
Sbjct: 74  QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 127
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + ++    E   IH D++  NIL+ +    K
Sbjct: 128 MAFIE---ERNYIHRDLRAANILVSDTLSCK 155

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           E+ + T    E++G G  G V+ G       VAV  L K        F  E  ++ +  H
Sbjct: 19  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 77
Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
           + LVRL  Y++   + I ++ EYM NGSL D L    K P+ I+ T      +A  IA G
Sbjct: 78  QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 131
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + ++    E   IH D++  NIL+ +    K
Sbjct: 132 MAFIE---ERNYIHRDLRAANILVSDTLSCK 159

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 35  KVGRGSSGTVYKGAMI-NRQLVAVNRLE---KVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           ++G GS G VY    + N ++VA+ ++    K  +E+ ++   E++ + +  H N ++  
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G  L      LV EY   GS +D+L   +K    +E   +     +G+ YLH      +I
Sbjct: 82  GCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMI 137
Query: 151 HCDIKPQNILMDENRCAK 168
           H D+K  NIL+ E    K
Sbjct: 138 HRDVKAGNILLSEPGLVK 155

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 35  KVGRGSSGTVYKGAMI-NRQLVAVNRLE---KVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           ++G GS G VY    + N ++VA+ ++    K  +E+ ++   E++ + +  H N ++  
Sbjct: 61  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G  L      LV EY   GS +D+L   +K    +E   +     +G+ YLH      +I
Sbjct: 121 GCYLREHTAWLVMEY-CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMI 176
Query: 151 HCDIKPQNILMDENRCAK 168
           H D+K  NIL+ E    K
Sbjct: 177 HRDVKAGNILLSEPGLVK 194

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 19/150 (12%)
Query: 37  GRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY---- 92
            RG  G V+K  ++N + VAV ++  + D++  + + E+  +    H N+++ +G     
Sbjct: 33  ARGRFGCVWKAQLLN-EYVAV-KIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 93  -SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC------ 145
            S++V    L+  +   GSL+D L       +W E   IA  +ARG+ YLH++       
Sbjct: 91  TSVDVDL-WLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 146 -ETQIIHCDIKPQNILMDEN--RCAKNFRL 172
            +  I H DIK +N+L+  N   C  +F L
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGL 177

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 24/158 (15%)
Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
            K ++G G+ G V+     N      + LVAV  L+       ++FQ E +++    H +
Sbjct: 19  LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSL--------ADILFNAEKQP-------NWIERTGI 130
           +V+  G   +    I+V+EYM +G L         D +   + QP          +   I
Sbjct: 79  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           A  IA G++YL  +     +H D+  +N L+  N   K
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVK 173

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLLGY 92
           E +G G  G V+K       L    ++ K    +++E  + EI V+ +  H NL++L   
Sbjct: 95  EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
               +  +LV EY+  G L D + +       ++     + I  GI ++H   +  I+H 
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHL 211
Query: 153 DIKPQNILMDENRCAKNFRL 172
           D+KP+NIL   NR AK  ++
Sbjct: 212 DLKPENILC-VNRDAKQIKI 230

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 16/157 (10%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK     F  ++G+G+ G+V    Y     N  ++VAV +L+   +E  R+F
Sbjct: 7   PTQFEERHLK-----FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 72  QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
           + EI+++    H N+V+  G  YS       L+ E++  GSL + L   +++ + I+   
Sbjct: 62  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQ 121
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
               I +G+ YL  +   + IH D+  +NIL++ ENR
Sbjct: 122 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 155

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
            K ++G G+ G V+     N      + LVAV  L++  +   ++FQ E +++    H++
Sbjct: 45  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSL----------ADILFNAEK-QPNWI---ERTGIA 131
           +VR  G   E    ++V+EYM +G L          A +L   E   P  +   +   +A
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             +A G++YL        +H D+  +N L+ +    K
Sbjct: 165 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVK 198

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
            K ++G G+ G V+     N      + LVAV  L++  +   ++FQ E +++    H++
Sbjct: 22  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSL----------ADILFNAEK-QPNWI---ERTGIA 131
           +VR  G   E    ++V+EYM +G L          A +L   E   P  +   +   +A
Sbjct: 82  IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             +A G++YL        +H D+  +N L+ +    K
Sbjct: 142 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVK 175

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
            K ++G G+ G V+     N      + LVAV  L++  +   ++FQ E +++    H++
Sbjct: 16  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSL----------ADILFNAEK-QPNWI---ERTGIA 131
           +VR  G   E    ++V+EYM +G L          A +L   E   P  +   +   +A
Sbjct: 76  IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             +A G++YL        +H D+  +N L+ +    K
Sbjct: 136 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVK 169

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 22  YAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRT 81
           + ELK+      +++G G  G V  G    +  VAV ++ K     E EF  E + + + 
Sbjct: 2   HMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAV-KMIKEGSMSEDEFFQEAQTMMKL 60
Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
            H  LV+  G   +     +V EY+SNG L + L +  K     +   +  D+  G+ +L
Sbjct: 61  SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL 120
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
                 Q IH D+  +N L+D + C K
Sbjct: 121 ESH---QFIHRDLAARNCLVDRDLCVK 144

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 36  VGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
           +G+G  G VY G  I    NR   A+  L ++ + ++ E F  E  ++   +H N++ L+
Sbjct: 29  IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 91  GYSL--EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           G  L  E    +L+  YM +G L   + + ++ P   +       +ARG+ YL    E +
Sbjct: 89  GIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQK 144
Query: 149 IIHCDIKPQNILMDENRCAK 168
            +H D+  +N ++DE+   K
Sbjct: 145 FVHRDLAARNCMLDESFTVK 164

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRT---HHRNLVRLL 90
           E +GRG  G VYKG++  R  VAV    KV     R+     K I R     H N+ R +
Sbjct: 19  ELIGRGRYGAVYKGSLDERP-VAV----KVFSFANRQNFINEKNIYRVPLMEHDNIARFI 73
Query: 91  GYSLEVSKK-----ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH--- 142
                V+       +LV EY  NGSL   L  +    +W+    +A  + RG+ YLH   
Sbjct: 74  VGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLHTEL 131
Query: 143 ---DECETQIIHCDIKPQNILM 161
              D  +  I H D+  +N+L+
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLV 153

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L K  +     F  E +V+ +  H  LV+L  Y++
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAV 248
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS GSL D L     +    P  ++   +A  IA G+ Y+        
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 302
Query: 150 IHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
           +H D++  NIL+ EN   K     +G++ E
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIE 332

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           E+ + T    E++G G  G V+ G       VAV  L++        F  E  ++ +  H
Sbjct: 5   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQH 63
Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
           + LVRL  Y++   + I ++ EYM NGSL D L    K P+ I+ T      +A  IA G
Sbjct: 64  QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 117
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + ++    E   IH +++  NIL+ +    K
Sbjct: 118 MAFIE---ERNYIHRNLRAANILVSDTLSCK 145

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEK-VLDEREREFQT---EIKVIGRTHHRNLVRL 89
           E++G G+ G V++   +  +    N   K V+   E + +T   EI+ +    H  LV L
Sbjct: 163 EELGTGAFGVVHR---VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 219
Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
                + ++ +++YE+MS G L + + +   + +  E     R + +G+ ++H   E   
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNY 276
Query: 150 IHCDIKPQNILMDENRC 166
           +H D+KP+NI+    R 
Sbjct: 277 VHLDLKPENIMFTTKRS 293

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 330
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS GSL D L     +    P  ++   +A  IA G+ Y+        
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 384
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 385 VHRDLRAANILVGENLVCK 403

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEK-VLDEREREFQT---EIKVIGRTHHRNLVRL 89
           E++G G+ G V++   +  +    N   K V+   E + +T   EI+ +    H  LV L
Sbjct: 57  EELGTGAFGVVHR---VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 113
Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
                + ++ +++YE+MS G L + + +   + +  E     R + +G+ ++H   E   
Sbjct: 114 HDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNY 170
Query: 150 IHCDIKPQNILMDENRC 166
           +H D+KP+NI+    R 
Sbjct: 171 VHLDLKPENIMFTTKRS 187

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY      R+ + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 13  LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 73  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 124
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 125 -RVIHRDIKPENLLL 138

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS GSL D L     +    P  ++   +A  IA G+ Y+        
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 301
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 302 VHRDLRAANILVGENLVCK 320

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS GSL D L     +    P  ++   +A  IA G+ Y+        
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 301
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 302 VHRDLRAANILVGENLVCK 320

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 15  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 71
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS GSL D L     +    P  ++   +A  IA G+ Y+        
Sbjct: 72  VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 125
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 126 VHRDLRAANILVGENLVCK 144

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 18  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 74
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAE----KQPNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS GSL D L        + P  ++   +A  IA G+ Y+        
Sbjct: 75  VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 128
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 129 VHRDLRAANILVGENLVCK 147

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Query: 34  EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLG 91
           E++GRG+ G V+ G +  +  LVAV    + L  + + +F  E +++ +  H N+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              +     +V E +  G     L     +        +  D A G+ YL  +C    IH
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N L+ E    K
Sbjct: 237 RDLAARNCLVTEKNVLK 253

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 36  VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDER-----EREFQTEIKVIGRTHHRNLVRL 89
           +G G+ GTVYKG  +   + V +    K+L+E        EF  E  ++    H +LVRL
Sbjct: 23  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 90  LGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIARDIARGILYLHD 143
           LG  L  + + LV + M +G L + +        ++   NW  +      IA+G++YL  
Sbjct: 83  LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE- 134
Query: 144 ECETQIIHCDIKPQNILM 161
             E +++H D+  +N+L+
Sbjct: 135 --ERRLVHRDLAARNVLV 150

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Query: 34  EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLG 91
           E++GRG+ G V+ G +  +  LVAV    + L  + + +F  E +++ +  H N+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              +     +V E +  G     L     +        +  D A G+ YL  +C    IH
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N L+ E    K
Sbjct: 237 RDLAARNCLVTEKNVLK 253

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 36  VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDERER-----EFQTEIKVIGRTHHRNLVRL 89
           +G G+ GTVYKG  +   + V +    K+L+E        EF  E  ++    H +LVRL
Sbjct: 46  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 90  LGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIARDIARGILYLHD 143
           LG  L  + + LV + M +G L + +        ++   NW  +      IA+G++YL  
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE- 157
Query: 144 ECETQIIHCDIKPQNILM 161
             E +++H D+  +N+L+
Sbjct: 158 --ERRLVHRDLAARNVLV 173

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS GSL D L     +    P  ++   +A  IA G+ Y+        
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 301
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 302 VHRDLRAANILVGENLVCK 320

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKIRHEKLVQL--YAV 81
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS GSL D L     +    P  ++   +A  IA G+ Y+        
Sbjct: 82  VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 136 VHRDLRAANILVGENLVCK 154

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 36  VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY      ++ ++A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 80  YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------ELANALSYCHSK-- 131
Query: 147 TQIIHCDIKPQNILMDEN 164
            ++IH DIKP+N+L+  N
Sbjct: 132 -RVIHRDIKPENLLLGSN 148

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY     N + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 16  LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 76  YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 128 -KVIHRDIKPENLLL 141

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 16  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 72
Query: 95  EVSKKI-LVYEYMSNGSLADIL-FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
              + I +V EYMS GSL D L     K     +   +A  IA G+ Y+        +H 
Sbjct: 73  VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 129
Query: 153 DIKPQNILMDENRCAK 168
           D++  NIL+ EN   K
Sbjct: 130 DLRAANILVGENLVCK 145

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 14  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 70
Query: 95  EVSKKI-LVYEYMSNGSLADIL-FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
              + I +V EYMS GSL D L     K     +   +A  IA G+ Y+        +H 
Sbjct: 71  VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 127
Query: 153 DIKPQNILMDENRCAK 168
           D++  NIL+ EN   K
Sbjct: 128 DLRAANILVGENLVCK 143

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS GSL D L     +    P  ++   +A  IA G+ Y+        
Sbjct: 82  VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 136 VHRDLRAANILVGENLVCK 154

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 36  VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY      ++ ++A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 80  YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------ELANALSYCHSK-- 131
Query: 147 TQIIHCDIKPQNILMDEN 164
            ++IH DIKP+N+L+  N
Sbjct: 132 -RVIHRDIKPENLLLGSN 148

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS GSL D L     +    P  ++   +A  IA G+ Y+        
Sbjct: 82  VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 136 VHRDLRAANILVGENLVCK 154

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS GSL D L     +    P  ++   +A  IA G+ Y+        
Sbjct: 82  VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 136 VHRDLRAANILVGENLVCK 154

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNLVRLLGY 92
           EK+G GS G+VYK   I+++   +  +++V  E + +E   EI ++ +    ++V+  G 
Sbjct: 35  EKLGEGSYGSVYKA--IHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
             + +   +V EY   GS++DI+    K     E   I +   +G+ YLH     + IH 
Sbjct: 93  YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHR 149
Query: 153 DIKPQNILMDENRCAK 168
           DIK  NIL++    AK
Sbjct: 150 DIKAGNILLNTEGHAK 165

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT----EIKVIGRTHHRNLVRL 89
           EKVG G+ G VYK      ++VA+ R+   LD  +    +    EI ++   HH N+V L
Sbjct: 27  EKVGEGTYGVVYKAKDSQGRIVALKRIR--LDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDECE 146
           +          LV+E+M    L  +L   ++    ++ + I      + RG+ + H   +
Sbjct: 85  IDVIHSERCLTLVFEFMEK-DLKKVL---DENKTGLQDSQIKIYLYQLLRGVAHCH---Q 137
Query: 147 TQIIHCDIKPQNILMDENRCAK 168
            +I+H D+KPQN+L++ +   K
Sbjct: 138 HRILHRDLKPQNLLINSDGALK 159

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS GSL D L     +    P  ++   +A  IA G+ Y+        
Sbjct: 82  VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 136 VHRDLRAANILVGENLVCK 154

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT----EIKVIGRTHHRNLVRL 89
           EKVG G+ G VYK      ++VA+ R+   LD  +    +    EI ++   HH N+V L
Sbjct: 27  EKVGEGTYGVVYKAKDSQGRIVALKRIR--LDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDECE 146
           +          LV+E+M    L  +L   ++    ++ + I      + RG+ + H   +
Sbjct: 85  IDVIHSERCLTLVFEFMEK-DLKKVL---DENKTGLQDSQIKIYLYQLLRGVAHCH---Q 137
Query: 147 TQIIHCDIKPQNILMDENRCAK 168
            +I+H D+KPQN+L++ +   K
Sbjct: 138 HRILHRDLKPQNLLINSDGALK 159

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 18/147 (12%)
Query: 36  VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           +G+G+ G V K    ++ +  A+ ++    +E+     +E+ ++   +H+ +VR     L
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 95  E----------VSKKILVY---EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
           E          V KK  ++   EY  NG+L D++ +        E   + R I   + Y+
Sbjct: 73  ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
           H +    IIH D+KP NI +DE+R  K
Sbjct: 133 HSQG---IIHRDLKPMNIFIDESRNVK 156

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 29/146 (19%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKV-LDEREREFQT---EIKVIGRTHHRNLVRL 89
           EK+G G+  TVYKG  +N+       L++V LD  E    T   EI ++    H N+VRL
Sbjct: 11  EKLGNGTYATVYKG--LNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRL 68
Query: 90  LGYSLEVSKKILVYEYMSN------------GSLADILFNAEKQPNWIERTGIARDIARG 137
                  +K  LV+E+M N             +   +  N  K   W         + +G
Sbjct: 69  YDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW--------QLLQG 120
Query: 138 ILYLHDECETQIIHCDIKPQNILMDE 163
           + + H   E +I+H D+KPQN+L+++
Sbjct: 121 LAFCH---ENKILHRDLKPQNLLINK 143

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 36  VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDER--EREFQTEIKVIGRTHHRNLVRLLGY 92
           VG GS G V K    +  ++VA+ +  +  D++  ++    EIK++ +  H NLV LL  
Sbjct: 33  VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR---DIARGILYLHDECETQI 149
             +  +  LV+E++ +  L D+    E  PN ++   + +    I  GI + H      I
Sbjct: 93  CKKKKRWYLVFEFVDHTILDDL----ELFPNGLDYQVVQKYLFQIINGIGFCHSH---NI 145
Query: 150 IHCDIKPQNILMDENRCAK 168
           IH DIKP+NIL+ ++   K
Sbjct: 146 IHRDIKPENILVSQSGVVK 164

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 36  VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           +G+G+ G VY G  ++ Q+ +A+  + +      +    EI +     H+N+V+ LG   
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 95  EVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GI-ARDIARGILYLHDECETQIIHC 152
           E     +  E +  GSL+ +L +        E+T G   + I  G+ YLHD    QI+H 
Sbjct: 90  ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHR 146
Query: 153 DIKPQNILMD 162
           DIK  N+L++
Sbjct: 147 DIKGDNVLIN 156

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G +   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 81  YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 132
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 133 -RVIHRDIKPENLLL 146

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G +   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 81  YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 132
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 133 -RVIHRDIKPENLLL 146

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS GSL D L     +    P  ++   +A  IA G+ Y+        
Sbjct: 82  VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D+   NIL+ EN   K
Sbjct: 136 VHRDLAAANILVGENLVCK 154

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 36  VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           +G+G+ G VY G  ++ Q+ +A+  + +      +    EI +     H+N+V+ LG   
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 95  EVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GI-ARDIARGILYLHDECETQIIHC 152
           E     +  E +  GSL+ +L +        E+T G   + I  G+ YLHD    QI+H 
Sbjct: 76  ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHR 132
Query: 153 DIKPQNILMD 162
           DIK  N+L++
Sbjct: 133 DIKGDNVLIN 142

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRLLGY 92
           E++G G+ G V++        V V +        ++   + EI ++ + HH  L+ L   
Sbjct: 57  EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
             +  + +L+ E++S G L D +   + + +  E     R    G+ ++H   E  I+H 
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHL 173
Query: 153 DIKPQNILMDENRCA 167
           DIKP+NI+ +  + +
Sbjct: 174 DIKPENIMCETKKAS 188

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           EK+G G+ G VYK      +  A+   RLEK  +        EI ++    H N+V+L  
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
                 + +LV+E++    L  +L   E     +        +  GI Y HD    +++H
Sbjct: 68  VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLH 123
Query: 152 CDIKPQNILMD 162
            D+KPQN+L++
Sbjct: 124 RDLKPQNLLIN 134

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           EK+G G+ G VYK      +  A+   RLEK  +        EI ++    H N+V+L  
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
                 + +LV+E++    L  +L   E     +        +  GI Y HD    +++H
Sbjct: 68  VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLH 123
Query: 152 CDIKPQNILMD 162
            D+KPQN+L++
Sbjct: 124 RDLKPQNLLIN 134

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           EK+G G+ G VYK      +  A+   RLEK  +        EI ++    H N+V+L  
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
                 + +LV+E++    L  +L   E     +        +  GI Y HD    +++H
Sbjct: 68  VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLH 123
Query: 152 CDIKPQNILMD 162
            D+KPQN+L++
Sbjct: 124 RDLKPQNLLIN 134

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 77  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 128
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 129 -RVIHRDIKPENLLL 142

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 77  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 128
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 129 -RVIHRDIKPENLLL 142

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 81  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 132
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 133 -RVIHRDIKPENLLL 146

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           F +++G G  G V  G    +  VA+ ++ K     E EF  E KV+    H  LV+L G
Sbjct: 8   FLKELGTGQFGVVKYGKWRGQYDVAI-KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              +     ++ EYM+NG L + L     +    +   + +D+   + YL  +   Q +H
Sbjct: 67  VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 123
Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N L+++    K
Sbjct: 124 RDLAARNCLVNDQGVVK 140

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 130
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 131 -RVIHRDIKPENLLL 144

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 18  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 78  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 129
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 130 -RVIHRDIKPENLLL 143

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 128 -RVIHRDIKPENLLL 141

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 77  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 128
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 129 -RVIHRDIKPENLLL 142

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 81  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 132
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 133 -RVIHRDIKPENLLL 146

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 18  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 78  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 129
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 130 -RVIHRDIKPENLLL 143

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           F +++G G  G V  G    +  VA+ ++ K     E EF  E KV+    H  LV+L G
Sbjct: 28  FLKELGTGQFGVVKYGKWRGQYDVAI-KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              +     ++ EYM+NG L + L     +    +   + +D+   + YL  +   Q +H
Sbjct: 87  VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N L+++    K
Sbjct: 144 RDLAARNCLVNDQGVVK 160

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS G L D L     +    P  ++   +A  IA G+ Y+        
Sbjct: 82  VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 136 VHRDLRAANILVGENLVCK 154

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 81  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 132
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 133 -RVIHRDIKPENLLL 146

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           F +++G G  G V  G    +  VA+ ++ K     E EF  E KV+    H  LV+L G
Sbjct: 28  FLKELGTGQFGVVKYGKWRGQYDVAI-KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              +     ++ EYM+NG L + L     +    +   + +D+   + YL  +   Q +H
Sbjct: 87  VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N L+++    K
Sbjct: 144 RDLAARNCLVNDQGVVK 160

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 128 -RVIHRDIKPENLLL 141

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           F +++G G  G V  G    +  VA+ ++ K     E EF  E KV+    H  LV+L G
Sbjct: 13  FLKELGTGQFGVVKYGKWRGQYDVAI-KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              +     ++ EYM+NG L + L     +    +   + +D+   + YL  +   Q +H
Sbjct: 72  VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N L+++    K
Sbjct: 129 RDLAARNCLVNDQGVVK 145

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 130
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 131 -RVIHRDIKPENLLL 144

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 130
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 131 -RVIHRDIKPENLLL 144

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 42  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 153
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 154 -RVIHRDIKPENLLL 167

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 33  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 93  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 144
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 145 -RVIHRDIKPENLLL 158

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           F +++G G  G V  G    +  VA+ ++ K     E EF  E KV+    H  LV+L G
Sbjct: 12  FLKELGTGQFGVVKYGKWRGQYDVAI-KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              +     ++ EYM+NG L + L     +    +   + +D+   + YL  +   Q +H
Sbjct: 71  VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 127
Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N L+++    K
Sbjct: 128 RDLAARNCLVNDQGVVK 144

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 128 -RVIHRDIKPENLLL 141

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 128 -RVIHRDIKPENLLL 141

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 128 -RVIHRDIKPENLLL 141

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 15  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 75  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 126
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 127 -RVIHRDIKPENLLL 140

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 20  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 80  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 131
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 132 -RVIHRDIKPENLLL 145

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           F +++G G  G V  G    +  VA+ ++ K     E EF  E KV+    H  LV+L G
Sbjct: 19  FLKELGTGQFGVVKYGKWRGQYDVAI-KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              +     ++ EYM+NG L + L     +    +   + +D+   + YL  +   Q +H
Sbjct: 78  VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 134
Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N L+++    K
Sbjct: 135 RDLAARNCLVNDQGVVK 151

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           F +++G G  G V  G    +  VA+ ++ K     E EF  E KV+    H  LV+L G
Sbjct: 13  FLKELGTGQFGVVKYGKWRGQYDVAI-KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              +     ++ EYM+NG L + L     +    +   + +D+   + YL  +   Q +H
Sbjct: 72  VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N L+++    K
Sbjct: 129 RDLAARNCLVNDQGVVK 145

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 35  KVGRGSSGTVYKGAMINRQ---LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           ++G G+ G VYK    N++   L A   +E   +E   ++  EI+++    H  +V+LLG
Sbjct: 18  ELGDGAFGKVYKAK--NKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
                 K  ++ E+   G++  I+   ++     +   + R +   + +LH +   +IIH
Sbjct: 76  AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIH 132
Query: 152 CDIKPQNILM 161
            D+K  N+LM
Sbjct: 133 RDLKAGNVLM 142

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 42  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 153
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 154 -RVIHRDIKPENLLL 167

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 128 -RVIHRDIKPENLLL 141

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           +++G G  G V+ G       VA+  L+      E  F  E +++ +  H  LV+L  Y+
Sbjct: 15  KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQL--YA 71
Query: 94  LEVSKKI-LVYEYMSNGSLADILFNAE----KQPNWIERTGIARDIARGILYLHDECETQ 148
           +   + I +V EYM+ GSL D L + E    K PN ++   +A  +A G+ Y+       
Sbjct: 72  VVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVD---MAAQVAAGMAYIE---RMN 125
Query: 149 IIHCDIKPQNILM 161
            IH D++  NIL+
Sbjct: 126 YIHRDLRSANILV 138

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 130
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 131 -RVIHRDIKPENLLL 144

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 35  KVGRGSSGTVYKGAMINRQ---LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           ++G G+ G VYK    N++   L A   +E   +E   ++  EI+++    H  +V+LLG
Sbjct: 26  ELGDGAFGKVYKAK--NKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
                 K  ++ E+   G++  I+   ++     +   + R +   + +LH +   +IIH
Sbjct: 84  AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIH 140
Query: 152 CDIKPQNILM 161
            D+K  N+LM
Sbjct: 141 RDLKAGNVLM 150

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 130
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 131 -RVIHRDIKPENLLL 144

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 15  TTPFSFSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQ 72
            TP  F        +D +K +  +G+GS G V    +   ++       KV+ +R+ + +
Sbjct: 11  ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQK 67
Query: 73  T-------EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI 125
           T       E++++ +  H N+++L  +  +     LV E  + G L D +  + K+ + +
Sbjct: 68  TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEV 126
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL 172
           +   I R +  GI Y+H   + +I+H D+KP+N+L++      N R+
Sbjct: 127 DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRI 170

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 128 -RVIHRDIKPENLLL 141

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 15  TTPFSFSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQ 72
            TP  F        +D +K +  +G+GS G V    +   ++       KV+ +R+ + +
Sbjct: 35  ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVI---LCKDKITGQECAVKVISKRQVKQK 91
Query: 73  T-------EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI 125
           T       E++++ +  H N+++L  +  +     LV E  + G L D +  + K+ + +
Sbjct: 92  TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEV 150
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL 172
           +   I R +  GI Y+H   + +I+H D+KP+N+L++      N R+
Sbjct: 151 DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRI 194

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           E +G+G  G VY G       + +  +E+  +++ + F+ E+    +T H N+V  +G  
Sbjct: 39  ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
           +      ++       +L  ++ +A+   +  +   IA++I +G+ YLH +    I+H D
Sbjct: 99  MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 154 IKPQNILMDENR 165
           +K +N+  D  +
Sbjct: 156 LKSKNVFYDNGK 167

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     ++ ERE    + ++    H N++ L       +  
Sbjct: 34  STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           IL+ E ++ G L D L  AEK+     E T   + I  G+ YLH     QI H D+KP+N
Sbjct: 90  ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
           I L+D N
Sbjct: 145 IMLLDRN 151

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYMS G L D L     +    P  ++   +A  IA G+ Y+        
Sbjct: 82  VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 136 VHRDLRAANILVGENLVCK 154

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 15  TTPFSFSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQ 72
            TP  F        +D +K +  +G+GS G V    +   ++       KV+ +R+ + +
Sbjct: 34  ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVI---LCKDKITGQECAVKVISKRQVKQK 90
Query: 73  T-------EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI 125
           T       E++++ +  H N+++L  +  +     LV E  + G L D +  + K+ + +
Sbjct: 91  TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEV 149
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL 172
           +   I R +  GI Y+H   + +I+H D+KP+N+L++      N R+
Sbjct: 150 DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRI 193

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 24  ELKKITDGFKEKVGRGS-SGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIKVIGRT 81
           ++KKI + FKE +G G+ S  V        +L AV  + +K L  +E   + EI V+ + 
Sbjct: 19  DIKKIFE-FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI 77
Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL----FNAEKQPNWIERTGIARDIARG 137
            H N+V L       +   LV + +S G L D +    F  EK     + + + R +   
Sbjct: 78  KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK-----DASTLIRQVLDA 132
Query: 138 ILYLHDECETQIIHCDIKPQNIL 160
           + YLH      I+H D+KP+N+L
Sbjct: 133 VYYLH---RMGIVHRDLKPENLL 152

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY       + + A+  L K   E+   E + + E+++     H N++RL G
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  + ++  L+ EY   G++   L     F+ ++   +I       ++A  + Y H +  
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 130
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+L+
Sbjct: 131 -RVIHRDIKPENLLL 144

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDERE---REFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY      N+ ++A+  L K   E+E    + + EI++     H N++R+  
Sbjct: 22  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  +  +  L+ E+   G L   L     F+ ++   ++E      ++A  + Y H   E
Sbjct: 82  YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------ELADALHYCH---E 132
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+LM
Sbjct: 133 RKVIHRDIKPENLLM 147

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     ++ ERE    + ++    H N++ L       +  
Sbjct: 33  STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 88
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           IL+ E ++ G L D L  AEK+     E T   + I  G+ YLH     QI H D+KP+N
Sbjct: 89  ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 143
Query: 159 I-LMDEN 164
           I L+D N
Sbjct: 144 IMLLDRN 150

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     ++ ERE    + ++    H N++ L       +  
Sbjct: 33  STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 88
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           IL+ E ++ G L D L  AEK+     E T   + I  G+ YLH     QI H D+KP+N
Sbjct: 89  ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 143
Query: 159 I-LMDEN 164
           I L+D N
Sbjct: 144 IMLLDRN 150

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     ++ ERE    + ++    H N++ L       +  
Sbjct: 34  STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           IL+ E ++ G L D L  AEK+     E T   + I  G+ YLH     QI H D+KP+N
Sbjct: 90  ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
           I L+D N
Sbjct: 145 IMLLDRN 151

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     ++ ERE    + ++    H N++ L       +  
Sbjct: 34  STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           IL+ E ++ G L D L  AEK+     E T   + I  G+ YLH     QI H D+KP+N
Sbjct: 90  ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
           I L+D N
Sbjct: 145 IMLLDRN 151

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36  VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDERE---REFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY      N+ ++A+  L K   E+E    + + EI++     H N++R+  
Sbjct: 23  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 92  YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           Y  +  +  L+ E+   G L   L     F+ ++   ++E      ++A  + Y H   E
Sbjct: 83  YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------ELADALHYCH---E 133
Query: 147 TQIIHCDIKPQNILM 161
            ++IH DIKP+N+LM
Sbjct: 134 RKVIHRDIKPENLLM 148

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     ++ ERE    + ++    H N++ L       +  
Sbjct: 34  STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           IL+ E ++ G L D L  AEK+     E T   + I  G+ YLH     QI H D+KP+N
Sbjct: 90  ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
           I L+D N
Sbjct: 145 IMLLDRN 151

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     ++ ERE    + ++    H N++ L       +  
Sbjct: 34  STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           IL+ E ++ G L D L  AEK+     E T   + I  G+ YLH     QI H D+KP+N
Sbjct: 90  ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
           I L+D N
Sbjct: 145 IMLLDRN 151

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     ++ ERE    + ++    H N++ L       +  
Sbjct: 34  STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           IL+ E ++ G L D L  AEK+     E T   + I  G+ YLH     QI H D+KP+N
Sbjct: 90  ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
           I L+D N
Sbjct: 145 IMLLDRN 151

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     ++ ERE    + ++    H N++ L       +  
Sbjct: 34  STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           IL+ E ++ G L D L  AEK+     E T   + I  G+ YLH     QI H D+KP+N
Sbjct: 90  ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
           I L+D N
Sbjct: 145 IMLLDRN 151

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     ++ ERE    + ++    H N++ L       +  
Sbjct: 34  STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           IL+ E ++ G L D L  AEK+     E T   + I  G+ YLH     QI H D+KP+N
Sbjct: 90  ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
           I L+D N
Sbjct: 145 IMLLDRN 151

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     ++ ERE    + ++    H N++ L       +  
Sbjct: 34  STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           IL+ E ++ G L D L  AEK+     E T   + I  G+ YLH     QI H D+KP+N
Sbjct: 90  ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
           I L+D N
Sbjct: 145 IMLLDRN 151

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     ++ ERE    + ++    H N++ L       +  
Sbjct: 34  STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           IL+ E ++ G L D L  AEK+     E T   + I  G+ YLH     QI H D+KP+N
Sbjct: 90  ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
           I L+D N
Sbjct: 145 IMLLDRN 151

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 36  VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDERE---REFQTEIKVIGRTHHRNLVRLLG 91
           +G+G  G VY         +VA+  L K   E+E    + + EI++    HH N++RL  
Sbjct: 31  LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIE-RTG-IARDIARGILYLHDECETQI 149
           Y  +  +  L+ EY   G L   L   +K   + E RT  I  ++A  ++Y H +   ++
Sbjct: 91  YFYDRRRIYLILEYAPRGELYKEL---QKSCTFDEQRTATIMEELADALMYCHGK---KV 144
Query: 150 IHCDIKPQN 158
           IH DIKP+N
Sbjct: 145 IHRDIKPEN 153

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     ++ ERE    + ++    H N++ L       +  
Sbjct: 34  STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           IL+ E ++ G L D L  AEK+     E T   + I  G+ YLH     QI H D+KP+N
Sbjct: 90  ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
           I L+D N
Sbjct: 145 IMLLDRN 151

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 32  FKEKVGRGSSGTVYKG-AMINRQLVAVNR--LEKVLDEREREFQTEIKVIGRTHHRNLVR 88
            +E +G G++  V        ++ VA+ R  LEK     + E   EI+ + + HH N+V 
Sbjct: 14  LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHPNIVS 72
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADIL----FNAEKQPNWIERTGIA---RDIARGILYL 141
                +   +  LV + +S GS+ DI+       E +   ++ + IA   R++  G+ YL
Sbjct: 73  YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 132
Query: 142 HDECETQIIHCDIKPQNILMDEN 164
           H   +   IH D+K  NIL+ E+
Sbjct: 133 HKNGQ---IHRDVKAGNILLGED 152

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 22  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYM+ GSL D L     +    P  ++   ++  IA G+ Y+        
Sbjct: 79  VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD---MSAQIASGMAYVE---RMNY 132
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 133 VHRDLRAANILVGENLVCK 151

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 32  FKEKVGRGSSGTVYKG-AMINRQLVAVNR--LEKVLDEREREFQTEIKVIGRTHHRNLVR 88
            +E +G G++  V        ++ VA+ R  LEK     + E   EI+ + + HH N+V 
Sbjct: 19  LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHPNIVS 77
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADIL----FNAEKQPNWIERTGIA---RDIARGILYL 141
                +   +  LV + +S GS+ DI+       E +   ++ + IA   R++  G+ YL
Sbjct: 78  YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 137
Query: 142 HDECETQIIHCDIKPQNILMDEN 164
           H   +   IH D+K  NIL+ E+
Sbjct: 138 HKNGQ---IHRDVKAGNILLGED 157

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35  KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  Y++
Sbjct: 22  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 95  EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
              + I +V EYM+ GSL D L     +    P  ++   ++  IA G+ Y+        
Sbjct: 79  VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD---MSAQIASGMAYVE---RMNY 132
Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D++  NIL+ EN   K
Sbjct: 133 VHRDLRAANILVGENLVCK 151

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 33/163 (20%)
Query: 36  VGRGSSGTVYKG---AMINRQ---LVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVR 88
           +G G+ G V++     ++  +   +VAV  L E+   + + +FQ E  ++    + N+V+
Sbjct: 55  IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADIL---------------------FNAEKQP--NWI 125
           LLG         L++EYM+ G L + L                      ++   P  +  
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           E+  IAR +A G+ YL    E + +H D+  +N L+ EN   K
Sbjct: 175 EQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVK 214

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G++G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 12  QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 71  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     +E ERE    + ++ +  H N++ L       +  
Sbjct: 35  STGLEYAAKFIKKRQSRASRRGVCREEIERE----VSILRQVLHPNIITLHDVYENRTDV 90
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
           +L+ E +S G L D L   E      E T   + I  G+ YLH +   +I H D+KP+NI
Sbjct: 91  VLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---KIAHFDLKPENI 146
Query: 160 -LMDEN 164
            L+D+N
Sbjct: 147 MLLDKN 152

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     +E ERE    + ++ +  H N++ L       +  
Sbjct: 35  STGLEYAAKFIKKRQSRASRRGVSREEIERE----VSILRQVLHHNVITLHDVYENRTDV 90
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
           +L+ E +S G L D L   E      E T   + I  G+ YLH +   +I H D+KP+NI
Sbjct: 91  VLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---KIAHFDLKPENI 146
Query: 160 -LMDENRCAKNFRL 172
            L+D+N    + +L
Sbjct: 147 MLLDKNIPIPHIKL 160

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Query: 41  SGTVYKGAMINRQLVA-VNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           +G  Y   ++ +++V  + ++E   DER         ++    H  ++R+ G   +  + 
Sbjct: 30  NGRYYAMKVLKKEIVVRLKQVEHTNDER--------LMLSIVTHPFIIRMWGTFQDAQQI 81
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
            ++ +Y+  G L  +L  +++ PN + +   A ++   + YLH +    II+ D+KP+NI
Sbjct: 82  FMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLHSK---DIIYRDLKPENI 137
Query: 160 LMDEN 164
           L+D+N
Sbjct: 138 LLDKN 142

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     +E ERE    + ++ +  H N++ L       +  
Sbjct: 35  STGLEYAAKFIKKRQSRASRRGVSREEIERE----VSILRQVLHHNVITLHDVYENRTDV 90
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
           +L+ E +S G L D L   E      E T   + I  G+ YLH +   +I H D+KP+NI
Sbjct: 91  VLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---KIAHFDLKPENI 146
Query: 160 -LMDENRCAKNFRL 172
            L+D+N    + +L
Sbjct: 147 MLLDKNIPIPHIKL 160

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     +E ERE    + ++ +  H N++ L       +  
Sbjct: 35  STGLEYAAKFIKKRQSRASRRGVSREEIERE----VSILRQVLHHNVITLHDVYENRTDV 90
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
           +L+ E +S G L D L   E      E T   + I  G+ YLH +   +I H D+KP+NI
Sbjct: 91  VLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---KIAHFDLKPENI 146
Query: 160 -LMDENRCAKNFRL 172
            L+D+N    + +L
Sbjct: 147 MLLDKNIPIPHIKL 160

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 73/144 (50%), Gaps = 14/144 (9%)
Query: 36  VGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLVR 88
           +G+GS G V    +   ++       KV+ +R+ + +T       E++++ +  H N+++
Sbjct: 40  LGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           L  +  +     LV E  + G L D +  + K+ + ++   I R +  GI Y+H   + +
Sbjct: 97  LYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGITYMH---KNK 152
Query: 149 IIHCDIKPQNILMDENRCAKNFRL 172
           I+H D+KP+N+L++      N R+
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRI 176

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     +E ERE    + ++ +  H N++ L       +  
Sbjct: 35  STGLEYAAKFIKKRQSRASRRGVSREEIERE----VSILRQVLHHNVITLHDVYENRTDV 90
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
           +L+ E +S G L D L   E      E T   + I  G+ YLH +   +I H D+KP+NI
Sbjct: 91  VLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---KIAHFDLKPENI 146
Query: 160 -LMDENRCAKNFRL 172
            L+D+N    + +L
Sbjct: 147 MLLDKNIPIPHIKL 160

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     ++ ERE    + ++    H N++ L       +  
Sbjct: 34  STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
           IL+ E ++ G L D L  AEK+     E T   + I  G+ YLH     QI H D+KP+N
Sbjct: 90  ILIGELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
           I L+D N
Sbjct: 145 IMLLDRN 151

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 62  KVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQ 121
           K +++   E   EI ++    H N+++L     +     LV E+   G L + + N  K 
Sbjct: 84  KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK- 142
Query: 122 PNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL 172
            +  +   I + I  GI YLH   +  I+H DIKP+NIL++      N ++
Sbjct: 143 FDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKI 190

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINAMLNHENVVKFY 71
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 72  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 32/160 (20%)
Query: 36  VGRGSSGTV-YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYS 93
           +G GSSGTV ++G+   R  VAV R+  ++D  +     EIK++  +  H N++R   Y 
Sbjct: 23  LGYGSSGTVVFQGSFQGRP-VAVKRM--LIDFCDIALM-EIKLLTESDDHPNVIRY--YC 76
Query: 94  LEVSKKIL-VYEYMSNGSLADIL---------FNAEKQPNWIERTGIARDIARGILYLHD 143
            E + + L +   + N +L D++            +K+ N I    + R IA G+ +LH 
Sbjct: 77  SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI---SLLRQIASGVAHLH- 132
Query: 144 ECETQIIHCDIKPQNILM--------DENRCAKNFRLWIG 175
               +IIH D+KPQNIL+        D+   A+N R+ I 
Sbjct: 133 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 32/160 (20%)
Query: 36  VGRGSSGTV-YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYS 93
           +G GSSGTV ++G+   R  VAV R+  ++D  +     EIK++  +  H N++R   Y 
Sbjct: 23  LGYGSSGTVVFQGSFQGRP-VAVKRM--LIDFCDIALM-EIKLLTESDDHPNVIRY--YC 76
Query: 94  LEVSKKIL-VYEYMSNGSLADIL---------FNAEKQPNWIERTGIARDIARGILYLHD 143
            E + + L +   + N +L D++            +K+ N I    + R IA G+ +LH 
Sbjct: 77  SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI---SLLRQIASGVAHLH- 132
Query: 144 ECETQIIHCDIKPQNILM--------DENRCAKNFRLWIG 175
               +IIH D+KPQNIL+        D+   A+N R+ I 
Sbjct: 133 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 40  SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
           S+G  Y    I ++    +R     +E ERE    + ++ +  H N++ L       +  
Sbjct: 35  STGLEYAAKFIKKRQSRASRRGVSREEIERE----VSILRQVLHHNVITLHDVYENRTDV 90
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
           +L+ E +S G L D L   E      E T   + I  G+ YLH +   +I H D+KP+NI
Sbjct: 91  VLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---KIAHFDLKPENI 146
Query: 160 -LMDENRCAKNFRL 172
            L+D+N    + +L
Sbjct: 147 MLLDKNIPIPHIKL 160

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEIXINKMLNHENVVKFY 70
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 71  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEIXINKMLNHENVVKFY 70
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 71  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 28  ITDGFK--EKVGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHR 84
           ++D F+   ++GRG++  VY+      Q   A+  L+K +D++    +TEI V+ R  H 
Sbjct: 51  LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI--VRTEIGVLLRLSHP 108
Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGI--ARDIARGILYLH 142
           N+++L       ++  LV E ++ G L D +    ++  + ER      + I   + YLH
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIV---EKGYYSERDAADAVKQILEAVAYLH 165
Query: 143 DECETQIIHCDIKPQNIL 160
              E  I+H D+KP+N+L
Sbjct: 166 ---ENGIVHRDLKPENLL 180

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 32/160 (20%)
Query: 36  VGRGSSGTV-YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYS 93
           +G GSSGTV ++G+   R  VAV R+  ++D  +     EIK++  +  H N++R   Y 
Sbjct: 41  LGYGSSGTVVFQGSFQGRP-VAVKRM--LIDFCDIALM-EIKLLTESDDHPNVIRY--YC 94
Query: 94  LEVSKKIL-VYEYMSNGSLADIL---------FNAEKQPNWIERTGIARDIARGILYLHD 143
            E + + L +   + N +L D++            +K+ N I    + R IA G+ +LH 
Sbjct: 95  SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI---SLLRQIASGVAHLH- 150
Query: 144 ECETQIIHCDIKPQNILM--------DENRCAKNFRLWIG 175
               +IIH D+KPQNIL+        D+   A+N R+ I 
Sbjct: 151 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 188

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 32/160 (20%)
Query: 36  VGRGSSGTV-YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYS 93
           +G GSSGTV ++G+   R  VAV R+  ++D  +     EIK++  +  H N++R   Y 
Sbjct: 41  LGYGSSGTVVFQGSFQGRP-VAVKRM--LIDFCDIALM-EIKLLTESDDHPNVIRY--YC 94
Query: 94  LEVSKKIL-VYEYMSNGSLADIL---------FNAEKQPNWIERTGIARDIARGILYLHD 143
            E + + L +   + N +L D++            +K+ N I    + R IA G+ +LH 
Sbjct: 95  SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI---SLLRQIASGVAHLH- 150
Query: 144 ECETQIIHCDIKPQNILM--------DENRCAKNFRLWIG 175
               +IIH D+KPQNIL+        D+   A+N R+ I 
Sbjct: 151 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 188

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEIXINKMLNHENVVKFY 71
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 72  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 41  SGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI 100
           +G  Y    I ++ ++ +R     +E ERE    + ++    H N++ L       +  +
Sbjct: 36  TGKEYAAKFIKKRRLSSSRRGVSREEIERE----VNILREIRHPNIITLHDIFENKTDVV 91
Query: 101 LVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
           L+ E +S G L D L  AEK+     E T   + I  G+ YLH +   +I H D+KP+NI
Sbjct: 92  LILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENI 146
Query: 160 -LMDEN 164
            L+D+N
Sbjct: 147 MLLDKN 152

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 71  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 15  TTPFSFSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQ 72
            TP  F        +D +K +  +G+GS G V    +   ++       KV+ +R+ + +
Sbjct: 11  ATPGXFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQK 67
Query: 73  T-------EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI 125
           T       E++++ +  H N+ +L  +  +     LV E  + G L D +  + K+ + +
Sbjct: 68  TDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEV 126
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL 172
           +   I R +  GI Y H   + +I+H D+KP+N+L++      N R+
Sbjct: 127 DAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRI 170

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 71
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 72  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 34/167 (20%)
Query: 23  AELKKITDG---FKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDEREREFQ 72
           A+LK+I+     F E++G    G VYKG +         Q VA+  L +K       EF+
Sbjct: 18  AKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 73  TEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILF---------------- 116
            E  +  R  H N+V LLG   +     +++ Y S+G L + L                 
Sbjct: 78  HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 117 --NAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM 161
             +A + P+++    +   IA G+ YL       ++H D+  +N+L+
Sbjct: 138 VKSALEPPDFVH---LVAQIAAGMEYLSSH---HVVHKDLATRNVLV 178

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK I+     ++G+G+ G+V    Y     N   LVAV +L+    +++R+F
Sbjct: 5   PTIFEERHLKYIS-----QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 59
Query: 72  QTEIKVIGRTHHRNLVRLLGYSLEVSKKI--LVYEYMSNGSLADILFNAEKQPNWIERTG 129
           Q EI+++   H   +V+  G S    ++   LV EY+ +G L D L     + +      
Sbjct: 60  QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 119
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD 162
            +  I +G+ YL      + +H D+  +NIL++
Sbjct: 120 YSSQICKGMEYLGSR---RCVHRDLAARNILVE 149

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 41  SGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI 100
           +G  Y    I ++ ++ +R     +E ERE    + ++    H N++ L       +  +
Sbjct: 29  TGKEYAAKFIKKRRLSSSRRGVSREEIERE----VNILREIRHPNIITLHDIFENKTDVV 84
Query: 101 LVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
           L+ E +S G L D L  AEK+     E T   + I  G+ YLH +   +I H D+KP+NI
Sbjct: 85  LILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENI 139
Query: 160 -LMDEN 164
            L+D+N
Sbjct: 140 MLLDKN 145

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK I+     ++G+G+ G+V    Y     N   LVAV +L+    +++R+F
Sbjct: 4   PTIFEERHLKYIS-----QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 58
Query: 72  QTEIKVIGRTHHRNLVRLLGYSLEVSKKI--LVYEYMSNGSLADILFNAEKQPNWIERTG 129
           Q EI+++   H   +V+  G S    ++   LV EY+ +G L D L     + +      
Sbjct: 59  QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 118
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD 162
            +  I +G+ YL      + +H D+  +NIL++
Sbjct: 119 YSSQICKGMEYLGSR---RCVHRDLAARNILVE 148

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 11  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 69
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 70  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 125
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 126 HRDIKPENLLLDE 138

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 71  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 71  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 71
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 72  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 71
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 72  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 71
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 72  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           +K+G G  G V+ G   N   VAV  L K      + F  E  ++    H  LVRL    
Sbjct: 18  KKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
            +     ++ E+M+ GSL D L + E      P  I+    +  IA G+ Y+  +     
Sbjct: 77  TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLID---FSAQIAEGMAYIERK---NY 130
Query: 150 IHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
           IH D++  N+L+ E+   K     + +V E
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIE 160

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 71
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 72  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 71  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK I+     ++G+G+ G+V    Y     N   LVAV +L+    +++R+F
Sbjct: 17  PTIFEERHLKYIS-----QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 71
Query: 72  QTEIKVIGRTHHRNLVRLLGYSLEVSKKI--LVYEYMSNGSLADILFNAEKQPNWIERTG 129
           Q EI+++   H   +V+  G S    ++   LV EY+ +G L D L     + +      
Sbjct: 72  QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 131
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD 162
            +  I +G+ YL      + +H D+  +NIL++
Sbjct: 132 YSSQICKGMEYLGSR---RCVHRDLAARNILVE 161

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 71
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 72  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 71  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 71  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 71  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 28/149 (18%)
Query: 33  KEKVGRGSSGTV-------------YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIG 79
           K+ +GRG S  V              K   +  + ++  +LE+V +   RE     +V G
Sbjct: 99  KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAG 158
Query: 80  RTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN----AEKQPNWIERTGIARDIA 135
             H   ++ L+      S   LV++ M  G L D L      +EK     E   I R + 
Sbjct: 159 HPH---IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEK-----ETRSIMRSLL 210
Query: 136 RGILYLHDECETQIIHCDIKPQNILMDEN 164
             + +LH      I+H D+KP+NIL+D+N
Sbjct: 211 EAVSFLH---ANNIVHRDLKPENILLDDN 236

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 71  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           +++G G  G V+ G   N   VAV  L K      + F  E  ++    H  LVRL    
Sbjct: 19  KRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
                  ++ EYM+ GSL D L + E      P  I+    +  IA G+ Y+        
Sbjct: 78  TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLID---FSAQIAEGMAYIE---RKNY 131
Query: 150 IHCDIKPQNILMDENRCAK 168
           IH D++  N+L+ E+   K
Sbjct: 132 IHRDLRAANVLVSESLMCK 150

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 36  VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           +G+G+ G V K    ++ +  A+ ++    +E+     +E+ ++   +H+ +VR     L
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 95  E----------VSKKILVY---EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
           E          V KK  ++   EY  N +L D++ +        E   + R I   + Y+
Sbjct: 73  ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
           H +    IIH D+KP NI +DE+R  K
Sbjct: 133 HSQG---IIHRDLKPMNIFIDESRNVK 156

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VAV    +++ +D  E   + EI +    +H N+V+  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G+  E + + L  EY S G L D +      P   +       +  G++YLH      I 
Sbjct: 71  GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
           H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 36  VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQT-EIKVIGRTHHRNLVRLLGYS 93
           +G+G++  V++G       L A+     +   R  + Q  E +V+ + +H+N+V+L    
Sbjct: 17  LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 94  LEVS--KKILVYEYMSNGSLADIL---FNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
            E +   K+L+ E+   GSL  +L    NA   P   E   + RD+  G+ +L    E  
Sbjct: 77  EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE-SEFLIVLRDVVGGMNHLR---ENG 132
Query: 149 IIHCDIKPQNIL 160
           I+H +IKP NI+
Sbjct: 133 IVHRNIKPGNIM 144

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 70  EFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERT 128
           E + E+ ++    H N++ L       +  +L+ E +S G L D L  AEK+     E T
Sbjct: 75  EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEAT 132
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNI-LMDEN 164
              + I  G+ YLH +   +I H D+KP+NI L+D+N
Sbjct: 133 QFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKN 166

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 34  EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVL----DERE--REFQTEIKVIGRTHHRNL 86
           EK+G G  G+V+K    ++  + A+ R +K L    DE+   RE      V+G+  H ++
Sbjct: 15  EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH-AVLGQ--HSHV 71
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI---ERTGIARDIARGILYLHD 143
           VR      E    ++  EY + GSLAD +    +  ++    E   +   + RG+ Y+H 
Sbjct: 72  VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 144 ECETQIIHCDIKPQNILM 161
                ++H DIKP NI +
Sbjct: 132 ---MSLVHMDIKPSNIFI 146

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 34  EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVL----DERE--REFQTEIKVIGRTHHRNL 86
           EK+G G  G+V+K    ++  + A+ R +K L    DE+   RE      V+G+  H ++
Sbjct: 17  EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH-AVLGQ--HSHV 73
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI---ERTGIARDIARGILYLHD 143
           VR      E    ++  EY + GSLAD +    +  ++    E   +   + RG+ Y+H 
Sbjct: 74  VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133
Query: 144 ECETQIIHCDIKPQNILM 161
                ++H DIKP NI +
Sbjct: 134 ---MSLVHMDIKPSNIFI 148

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 32  FKEKVGRGSSGTVYKGAMINR------QLVAVNRLEKVLDEREREFQTEI----KVIGRT 81
           F E +G+G+   ++KG  + R      QL     L KVLD+  R +         ++ + 
Sbjct: 12  FNESLGQGTFTKIFKG--VRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
            H++LV   G  +   + ILV E++  GSL   L   +   N + +  +A+ +A  + +L
Sbjct: 70  SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL 129
Query: 142 HDECETQIIHCDIKPQNILM 161
               E  +IH ++  +NIL+
Sbjct: 130 E---ENTLIHGNVCAKNILL 146

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 14  LTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT 73
           L + ++ +  ELK +     + +G+G  G V  G     + VAV  ++   D   + F  
Sbjct: 3   LGSGWALNMKELKLL-----QTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLA 54
Query: 74  EIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIE-RTGIA 131
           E  V+ +  H NLV+LLG  +E    + +V EYM+ GSL D L +  +     +     +
Sbjct: 55  EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 114
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            D+   + YL        +H D+  +N+L+ E+  AK
Sbjct: 115 LDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAK 148

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 34  EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVL----DERE--REFQTEIKVIGRTHHRNL 86
           EK+G G  G+V+K    ++  + A+ R +K L    DE+   RE      V+G+  H ++
Sbjct: 15  EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH-AVLGQ--HSHV 71
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI---ERTGIARDIARGILYLHD 143
           VR      E    ++  EY + GSLAD +    +  ++    E   +   + RG+ Y+H 
Sbjct: 72  VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 144 ECETQIIHCDIKPQNILM 161
                ++H DIKP NI +
Sbjct: 132 ---MSLVHMDIKPSNIFI 146

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 35  KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           K+G GS+G V      +  + VAV +++    +R      E+ ++   HH N+V +    
Sbjct: 52  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
           L   +  +V E++  G+L DI+ +       I    +   + R + YLH++    +IH D
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI--ATVCLSVLRALSYLHNQ---GVIHRD 166
Query: 154 IKPQNILMDEN 164
           IK  +IL+  +
Sbjct: 167 IKSDSILLTSD 177

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 31/155 (20%)
Query: 32  FKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHR 84
           F E++G    G VYKG +         Q VA+  L +K       EF+ E  +  R  H 
Sbjct: 13  FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72
Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILF------------------NAEKQPNWIE 126
           N+V LLG   +     +++ Y S+G L + L                   +A + P+++ 
Sbjct: 73  NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILM 161
              +   IA G+ YL       ++H D+  +N+L+
Sbjct: 133 ---LVAQIAAGMEYLSSH---HVVHKDLATRNVLV 161

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 36  VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQT-EIKVIGRTHHRNLVRLLGYS 93
           +G+G++  V++G       L A+     +   R  + Q  E +V+ + +H+N+V+L    
Sbjct: 17  LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 94  LEVS--KKILVYEYMSNGSLADIL---FNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
            E +   K+L+ E+   GSL  +L    NA   P   E   + RD+  G+ +L    E  
Sbjct: 77  EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE-SEFLIVLRDVVGGMNHLR---ENG 132
Query: 149 IIHCDIKPQNIL 160
           I+H +IKP NI+
Sbjct: 133 IVHRNIKPGNIM 144

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 34  EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVL----DERE--REFQTEIKVIGRTHHRNL 86
           EK+G G  G+V+K    ++  + A+ R +K L    DE+   RE      V+G+  H ++
Sbjct: 13  EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH-AVLGQ--HSHV 69
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI---ERTGIARDIARGILYLHD 143
           VR      E    ++  EY + GSLAD +    +  ++    E   +   + RG+ Y+H 
Sbjct: 70  VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 129
Query: 144 ECETQIIHCDIKPQNILM 161
                ++H DIKP NI +
Sbjct: 130 ---MSLVHMDIKPSNIFI 144

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 36  VGRGSSGTVYKGAMIN-RQLVAVNRLE-----KVLDEREREFQTEIKVIGRTHHRNLVRL 89
           +G G   TVYK    N  Q+VA+ +++     +  D   R    EIK++    H N++ L
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQ 148
           L      S   LV+++M       I  N+    P+ I+   +     +G+ YLH   +  
Sbjct: 78  LDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLH---QHW 132
Query: 149 IIHCDIKPQNILMDENRCAK 168
           I+H D+KP N+L+DEN   K
Sbjct: 133 ILHRDLKPNNLLLDENGVLK 152

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 19/179 (10%)
Query: 10  NYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERE 68
           + S    P + S    ++IT     K+G G+ G VYK    +  + VA+ R+ ++  E E
Sbjct: 21  SMSVSAAPSATSIDRYRRIT-----KLGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEE 74
Query: 69  REFQT---EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI 125
               T   E+ ++    HRN++ L        +  L++EY  N    D+    +K P+  
Sbjct: 75  GVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN----DLKKYMDKNPDVS 130
Query: 126 ERT--GIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARS 182
            R        +  G+ + H     + +H D+KPQN+L+  +  ++   L IG    AR+
Sbjct: 131 MRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 37  GRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL-----G 91
            RG  G V+K  ++N   VAV ++  + D++  + + EI       H NL++ +     G
Sbjct: 24  ARGRFGCVWKAQLMN-DFVAV-KIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC------ 145
            +LEV +  L+  +   GSL D L        W E   +A  ++RG+ YLH++       
Sbjct: 82  SNLEV-ELWLITAFHDKGSLTDYLKG--NIITWNELCHVAETMSRGLSYLHEDVPWCRGE 138
Query: 146 --ETQIIHCDIKPQNILMDENRCA 167
             +  I H D K +N+L+  +  A
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTA 162

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 15/153 (9%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
           P  F    LK I+     ++G+G+ G+V    Y     N   LVAV +L+    +++R+F
Sbjct: 1   PTIFEERHLKYIS-----QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 55
Query: 72  QTEIKVIGRTHHRNLVRLLGYSLEVSKK--ILVYEYMSNGSLADILFNAEKQPNWIERTG 129
           Q EI+++   H   +V+  G S    +    LV EY+ +G L D L     + +      
Sbjct: 56  QREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLL 115
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD 162
            +  I +G+ YL      + +H D+  +NIL++
Sbjct: 116 YSSQICKGMEYLGSR---RCVHRDLAARNILVE 145

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKV-LDEREREFQT----EIKVIGRTHHRNLVR 88
           EK+G G+ GTV+K    NR+   +  L++V LD+ +    +    EI ++    H+N+VR
Sbjct: 8   EKIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           L        K  LV+E+  +  L       N +  P  ++       + +G+ + H    
Sbjct: 66  LHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVK--SFLFQLLKGLGFCHSR-- 120
Query: 147 TQIIHCDIKPQNILMDEN 164
             ++H D+KPQN+L++ N
Sbjct: 121 -NVLHRDLKPQNLLINRN 137

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKV-LDEREREFQT----EIKVIGRTHHRNLVR 88
           EK+G G+ GTV+K    NR+   +  L++V LD+ +    +    EI ++    H+N+VR
Sbjct: 8   EKIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECE 146
           L        K  LV+E+  +  L       N +  P  ++       + +G+ + H    
Sbjct: 66  LHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVK--SFLFQLLKGLGFCHSR-- 120
Query: 147 TQIIHCDIKPQNILMDEN 164
             ++H D+KPQN+L++ N
Sbjct: 121 -NVLHRDLKPQNLLINRN 137

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           + +G+G  G V  G     + VAV  ++   D   + F  E  V+ +  H NLV+LLG  
Sbjct: 27  QTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 94  LEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIE-RTGIARDIARGILYLHDECETQIIH 151
           +E    + +V EYM+ GSL D L +  +     +     + D+   + YL        +H
Sbjct: 84  VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 140
Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N+L+ E+  AK
Sbjct: 141 RDLAARNVLVSEDNVAK 157

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 32  FKEKVGRGSSGTVYKGAMINR------QLVAVNRLEKVLDEREREFQTEI----KVIGRT 81
           F E +G+G+   ++KG  + R      QL     L KVLD+  R +         ++ + 
Sbjct: 12  FNESLGQGTFTKIFKG--VRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
            H++LV   G      + ILV E++  GSL   L   +   N + +  +A+ +A  + +L
Sbjct: 70  SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFL 129
Query: 142 HDECETQIIHCDIKPQNILM 161
               E  +IH ++  +NIL+
Sbjct: 130 E---ENTLIHGNVCAKNILL 146

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           + +G+G  G V  G     + VAV  ++   D   + F  E  V+ +  H NLV+LLG  
Sbjct: 12  QTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 94  LEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIE-RTGIARDIARGILYLHDECETQIIH 151
           +E    + +V EYM+ GSL D L +  +     +     + D+   + YL        +H
Sbjct: 69  VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 125
Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N+L+ E+  AK
Sbjct: 126 RDLAARNVLVSEDNVAK 142

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           + +G+G  G V  G     + VAV  ++   D   + F  E  V+ +  H NLV+LLG  
Sbjct: 199 QTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 94  LEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIE-RTGIARDIARGILYLHDECETQIIH 151
           +E    + +V EYM+ GSL D L +  +     +     + D+   + YL        +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 312
Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N+L+ E+  AK
Sbjct: 313 RDLAARNVLVSEDNVAK 329

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 36  VGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQ---TEIKVIGRTHHRNLVRLLG 91
           +GRG  G V+   M    +L A  +L K   ++ + +Q    E K++ + H R +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 92  YSLEVSKKI-LVYEYMSNGSLADILFNA-EKQPNWIERTGI--ARDIARGILYLHDECET 147
           Y+ E    + LV   M+ G +   ++N  E  P + E   I     I  G+ +LH   + 
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QR 308
Query: 148 QIIHCDIKPQNILMDEN 164
            II+ D+KP+N+L+D++
Sbjct: 309 NIIYRDLKPENVLLDDD 325

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 36  VGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQ---TEIKVIGRTHHRNLVRLLG 91
           +GRG  G V+   M    +L A  +L K   ++ + +Q    E K++ + H R +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 92  YSLEVSKKI-LVYEYMSNGSLADILFNA-EKQPNWIERTGI--ARDIARGILYLHDECET 147
           Y+ E    + LV   M+ G +   ++N  E  P + E   I     I  G+ +LH   + 
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QR 308
Query: 148 QIIHCDIKPQNILMDEN 164
            II+ D+KP+N+L+D++
Sbjct: 309 NIIYRDLKPENVLLDDD 325

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 12  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++S   L D +       +    TGI   + +  L+   +    
Sbjct: 70  LLDVIHTENKLYLVFEFLSM-DLKDFM-------DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIK 146

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 36  VGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQ---TEIKVIGRTHHRNLVRLLG 91
           +GRG  G V+   M    +L A  +L K   ++ + +Q    E K++ + H R +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 92  YSLEVSKKI-LVYEYMSNGSLADILFNA-EKQPNWIERTGI--ARDIARGILYLHDECET 147
           Y+ E    + LV   M+ G +   ++N  E  P + E   I     I  G+ +LH   + 
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QR 308
Query: 148 QIIHCDIKPQNILMDEN 164
            II+ D+KP+N+L+D++
Sbjct: 309 NIIYRDLKPENVLLDDD 325

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 17/156 (10%)
Query: 12  STLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGA--MINRQLVAVNRLEKVLDERER 69
           ST + P  F   ++ K+T    E +G G+   V +GA  + N +  AV  +EK       
Sbjct: 2   STDSLPGKFE--DMYKLT---SELLGEGAYAKV-QGAVSLQNGKEYAVKIIEKQAGHSRS 55
Query: 70  EFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT 128
               E++ + +   ++N++ L+ +  + ++  LV+E +  GS   IL + +KQ ++ ER 
Sbjct: 56  RVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGS---ILAHIQKQKHFNERE 112
Query: 129 G--IARDIARGILYLHDECETQIIHCDIKPQNILMD 162
              + RD+A  + +LH +    I H D+KP+NIL +
Sbjct: 113 ASRVVRDVAAALDFLHTK---GIAHRDLKPENILCE 145

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 36  VGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQ---TEIKVIGRTHHRNLVRLLG 91
           +GRG  G V+   M    +L A  +L K   ++ + +Q    E K++ + H R +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 92  YSLEVSKKI-LVYEYMSNGSLADILFNA-EKQPNWIERTGI--ARDIARGILYLHDECET 147
           Y+ E    + LV   M+ G +   ++N  E  P + E   I     I  G+ +LH   + 
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QR 308
Query: 148 QIIHCDIKPQNILMDEN 164
            II+ D+KP+N+L+D++
Sbjct: 309 NIIYRDLKPENVLLDDD 325

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 11  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++S   L D +       +    TGI   + +  L+   +    
Sbjct: 69  LLDVIHTENKLYLVFEFLSM-DLKDFM-------DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIK 145

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35  KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
           ++G G+ G V K      G ++ R+L+ +     + ++  RE Q    V+   +   +V 
Sbjct: 23  ELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 78
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
             G      +  +  E+M  GSL  +L  A++ P  I  +  IA  + RG+ YL ++   
Sbjct: 79  FYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREK--H 134
Query: 148 QIIHCDIKPQNILMD 162
           QI+H D+KP NIL++
Sbjct: 135 QIMHRDVKPSNILVN 149

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 36  VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
           +G+G+ G V K    ++ +  A+ ++    +E+     +E+ ++   +H+ +VR     L
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 95  E----------VSKKILVY---EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
           E          V KK  ++   EY  N +L D++ +        E   + R I   + Y+
Sbjct: 73  ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
           H +    IIH ++KP NI +DE+R  K
Sbjct: 133 HSQG---IIHRNLKPXNIFIDESRNVK 156

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 12  STLTTPFSFSYAELKKITDGFKEKVGRGSSGTV--YKGAMINR---QLVAVNRLEKVLDE 66
           S  + P  F    LKKI D     +G G  G V  Y     N    ++VAV  L+     
Sbjct: 3   SPASDPTVFHKRYLKKIRD-----LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGP 57
Query: 67  RERE-FQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPN 123
           + R  ++ EI ++   +H ++++  G   +  +K L  V EY+  GSL D L        
Sbjct: 58  QHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIG 115
Query: 124 WIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             +    A+ I  G+ YLH +     IH ++  +N+L+D +R  K
Sbjct: 116 LAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVK 157

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 32  FKEKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           F E +G G+   V+     +  +L A+  ++K    R+   + EI V+ +  H N+V L 
Sbjct: 13  FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGILYLHDECETQ 148
                 +   LV + +S G L D +    ++  + E+    + + +   + YLH   E  
Sbjct: 73  DIYESTTHYYLVMQLVSGGELFDRIL---ERGVYTEKDASLVIQQVLSAVKYLH---ENG 126
Query: 149 IIHCDIKPQNIL 160
           I+H D+KP+N+L
Sbjct: 127 IVHRDLKPENLL 138

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 36  VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDERE---REFQTEIKVIGRTHHRNLVRLLG 91
           +G+GS   VY+   I+  L VA+  ++K    +    +  Q E+K+  +  H +++ L  
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
           Y  + +   LV E   NG +   L N  K  +  E       I  G+LYLH      I+H
Sbjct: 79  YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILH 135
Query: 152 CDIKPQNILMDEN 164
            D+   N+L+  N
Sbjct: 136 RDLTLSNLLLTRN 148

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 22  YAELKKITDGF--KEKVGRGSSG----TVYKGAMINRQLVAVNRLEKVLDEREREFQTEI 75
           Y +    +DG+  KE +G GS       V+K   +   +       KV+D+ +R+   EI
Sbjct: 19  YFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAV-------KVIDKSKRDPSEEI 71
Query: 76  KVIGR-THHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL----FNAEKQPNWIERTGI 130
           +++ R   H N++ L     +     LV E M  G L D +    F +E++ +++  T  
Sbjct: 72  EILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-- 129
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNIL-MDENRCAKNFRL 172
              I + + YLH +    ++H D+KP NIL +DE+   +  R+
Sbjct: 130 ---IGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRI 166

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 12  STLTTPFSFSYAELKKITDGFKEKVGRGSSGTV--YKGAMINR---QLVAVNRLEKVLDE 66
           S  + P  F    LKKI D     +G G  G V  Y     N    ++VAV  L+     
Sbjct: 3   SPASDPTVFHKRYLKKIRD-----LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGP 57
Query: 67  RERE-FQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPN 123
           + R  ++ EI ++   +H ++++  G   +  +K L  V EY+  GSL D L        
Sbjct: 58  QHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIG 115
Query: 124 WIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             +    A+ I  G+ YLH +     IH ++  +N+L+D +R  K
Sbjct: 116 LAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVK 157

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
           + +G G+ G V     I       NR+ KV       D  E++    I      K+IG+ 
Sbjct: 34  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 92
Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
            H+N++ LLG   +     ++ EY S G+L + L                N E+Q +  +
Sbjct: 93  -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
               A  +ARG+ YL      + IH D+  +N+L+ E+   K
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 190

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/141 (20%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERE-----REFQTEIKVIGRTHHRNL 86
           FK K+G G+ G V+   ++  +   + R+ K +++        + + EI+V+    H N+
Sbjct: 26  FKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHD 143
           +++     +     +V E    G L + + +A+ +   +    +A   + +   + Y H 
Sbjct: 83  IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 144 ECETQIIHCDIKPQNILMDEN 164
           +    ++H D+KP+NIL  + 
Sbjct: 143 Q---HVVHKDLKPENILFQDT 160

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
           + +G G+ G V     I       NR+ KV       D  E++    I      K+IG+ 
Sbjct: 75  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 133
Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
            H+N++ LLG   +     ++ EY S G+L + L                N E+Q +  +
Sbjct: 134 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
               A  +ARG+ YL      + IH D+  +N+L+ E+   K
Sbjct: 193 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 231

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
           + +G G+ G V     I       NR+ KV       D  E++    I      K+IG+ 
Sbjct: 27  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 85
Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
            H+N++ LLG   +     ++ EY S G+L + L                N E+Q +  +
Sbjct: 86  -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
               A  +ARG+ YL      + IH D+  +N+L+ E+   K
Sbjct: 145 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 183

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
           + +G G+ G V     I       NR+ KV       D  E++    I      K+IG+ 
Sbjct: 26  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 84
Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
            H+N++ LLG   +     ++ EY S G+L + L                N E+Q +  +
Sbjct: 85  -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
               A  +ARG+ YL      + IH D+  +N+L+ E+   K
Sbjct: 144 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 182

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
           + +G G+ G V     I       NR+ KV       D  E++    I      K+IG+ 
Sbjct: 23  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 81
Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
            H+N++ LLG   +     ++ EY S G+L + L                N E+Q +  +
Sbjct: 82  -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
               A  +ARG+ YL      + IH D+  +N+L+ E+   K
Sbjct: 141 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 179

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 33  KEKVGRGSSGTVYKGA-MINRQLVAVNRLE--KVLDERER-EFQTEIKVIGRTHHRNLVR 88
           ++K+GRG    VY+ A +++   VA+ +++   ++D + R +   EI ++ + +H N+++
Sbjct: 37  EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK 96
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
                +E ++  +V E    G L+ ++ + +KQ   I    + +   +    L      +
Sbjct: 97  YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR 156
Query: 149 IIHCDIKPQNILMDENRCAKNFRLWIGKVDEARS 182
           ++H DIKP N+ +      K   L +G+   +++
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 190

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
           + +G G+ G V     I       NR+ KV       D  E++    I      K+IG+ 
Sbjct: 34  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 92
Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
            H+N++ LLG   +     ++ EY S G+L + L                N E+Q +  +
Sbjct: 93  -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
               A  +ARG+ YL      + IH D+  +N+L+ E+   K
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 190

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
           + +G G+ G V     I       NR+ KV       D  E++    I      K+IG+ 
Sbjct: 34  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 92
Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
            H+N++ LLG   +     ++ EY S G+L + L                N E+Q +  +
Sbjct: 93  -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
               A  +ARG+ YL      + IH D+  +N+L+ E+   K
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 190

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
           + +G G+ G V     I       NR+ KV       D  E++    I      K+IG+ 
Sbjct: 34  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 92
Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
            H+N++ LLG   +     ++ EY S G+L + L                N E+Q +  +
Sbjct: 93  -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
               A  +ARG+ YL      + IH D+  +N+L+ E+   K
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 190

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 26/138 (18%)
Query: 51  NRQLVAVNRLEKVLDEREREF-----------------QTEIKVIGRTHHRNLVRLLGYS 93
           + +  A+ + EK L E++R+F                 + E+++I    +   +   G  
Sbjct: 53  DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGII 112
Query: 94  LEVSKKILVYEYMSNGSLA---DILFNAEKQPNWIERTGIARDIARGIL----YLHDECE 146
               +  ++YEYM N S+    +  F  +K         + + I + +L    Y+H+E  
Sbjct: 113 TNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE-- 170
Query: 147 TQIIHCDIKPQNILMDEN 164
             I H D+KP NILMD+N
Sbjct: 171 KNICHRDVKPSNILMDKN 188

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
           + +G G+ G V     I       NR+ KV       D  E++    I      K+IG+ 
Sbjct: 19  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 77
Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
            H+N++ LLG   +     ++ EY S G+L + L                N E+Q +  +
Sbjct: 78  -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
               A  +ARG+ YL      + IH D+  +N+L+ E+   K
Sbjct: 137 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 175

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 36  VGRGSSG----TVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           +GRGS G     V KG  I R   A  ++ K   E    F+ EI+++    H N++RL  
Sbjct: 17  IGRGSWGEVKIAVQKGTRIRR---AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              + +   LV E  + G L + + + ++     +   I +D+   + Y H   +  + H
Sbjct: 74  TFEDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCH---KLNVAH 129
Query: 152 CDIKPQNILM 161
            D+KP+N L 
Sbjct: 130 RDLKPENFLF 139

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 36  VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT---EIKVIGRTHHRNLVRLLG 91
           +G+GS G V K    I +Q  AV  + K    + ++  T   E++++ +  H N+++L  
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKA-SAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              + S   +V E  + G L D +    K+ +  +   I + +  GI Y+H   +  I+H
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMH---KHNIVH 144
Query: 152 CDIKPQNILMD 162
            D+KP+NIL++
Sbjct: 145 RDLKPENILLE 155

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 36  VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT---EIKVIGRTHHRNLVRLLG 91
           +G+GS G V K    I +Q  AV  + K    + ++  T   E++++ +  H N+++L  
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKA-SAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              + S   +V E  + G L D +    K+ +  +   I + +  GI Y+H   +  I+H
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMH---KHNIVH 144
Query: 152 CDIKPQNILMD 162
            D+KP+NIL++
Sbjct: 145 RDLKPENILLE 155

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/134 (20%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           E +GRG  G V++    + +   + +  KV    +   + EI ++    HRN++ L    
Sbjct: 11  EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70
Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
             + + ++++E++S   + + +  +  + N  E       +   + +LH      I H D
Sbjct: 71  ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFD 127
Query: 154 IKPQNILMDENRCA 167
           I+P+NI+    R +
Sbjct: 128 IRPENIIYQTRRSS 141

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 36  VGRGSSG----TVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           +GRGS G     V KG  I R   A  ++ K   E    F+ EI+++    H N++RL  
Sbjct: 34  IGRGSWGEVKIAVQKGTRIRR---AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              + +   LV E  + G L + + + ++     +   I +D+   + Y H   +  + H
Sbjct: 91  TFEDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCH---KLNVAH 146
Query: 152 CDIKPQNILM 161
            D+KP+N L 
Sbjct: 147 RDLKPENFLF 156

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 10  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++S         + +K  +    TGI   + +  L+   +    
Sbjct: 68  LLDVIHTENKLYLVFEFLS--------MDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KP+N+L++     K
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIK 144

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 36  VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT---EIKVIGRTHHRNLVRLLG 91
           +G+GS G V K    I +Q  AV  + K    + ++  T   E++++ +  H N+++L  
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKA-SAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              + S   +V E  + G L D +    K+ +  +   I + +  GI Y+H      I+H
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMHKH---NIVH 144
Query: 152 CDIKPQNILMD 162
            D+KP+NIL++
Sbjct: 145 RDLKPENILLE 155

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 12  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++S         + +K  +    TGI   + +  L+   +    
Sbjct: 70  LLDVIHTENKLYLVFEFLS--------MDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KP+N+L++     K
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIK 146

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 27/157 (17%)
Query: 28  ITDGF--KEKVGRGSSG----TVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR- 80
            +DG+  KE +G GS       V+K   +   +       KV+D+ +R+   EI+++ R 
Sbjct: 25  FSDGYVVKETIGVGSYSECKRCVHKATNMEYAV-------KVIDKSKRDPSEEIEILLRY 77
Query: 81  THHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL----FNAEKQPNWIERTGIARDIAR 136
             H N++ L     +     LV E M  G L D +    F +E++ +++  T     I +
Sbjct: 78  GQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-----IGK 132
Query: 137 GILYLHDECETQIIHCDIKPQNIL-MDENRCAKNFRL 172
            + YLH +    ++H D+KP NIL +DE+   +  R+
Sbjct: 133 TVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRI 166

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQT---EIKVIGRTHHRNLVRL 89
           +K+G G+  TVYKG + +   LVA+  +   L+  E    T   E+ ++    H N+V L
Sbjct: 8   DKLGEGTYATVYKGKSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDLKHANIVTL 65
Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
                      LV+EY+ +  L   L +     N          + RG+ Y H +   ++
Sbjct: 66  HDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KV 121
Query: 150 IHCDIKPQNILMDE 163
           +H D+KPQN+L++E
Sbjct: 122 LHRDLKPQNLLINE 135

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 16  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 74  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIK 150

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 9   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 67  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 12  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 70  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIK 146

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 11  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 69  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIK 145

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 12  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 70  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIK 146

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 9   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 67  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 16  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 74  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIK 150

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 13  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 71  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIK 147

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 9   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 67  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 8   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 66  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIK 142

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 8   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 66  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIK 142

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 9   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 67  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 9   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 67  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 8   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 66  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIK 142

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 9   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 67  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 11  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 69  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIK 145

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35  KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
           ++G G+ G V+K      G ++ R+L+ +     + ++  RE Q    V+   +   +V 
Sbjct: 40  ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 95
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
             G      +  +  E+M  GSL  +L  A + P  I  +  IA  + +G+ YL ++   
Sbjct: 96  FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 151
Query: 148 QIIHCDIKPQNILMD 162
           +I+H D+KP NIL++
Sbjct: 152 KIMHRDVKPSNILVN 166

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 10  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 68  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIK 144

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 10  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 68  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIK 144

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 9   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 67  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35  KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
           ++G G+ G V+K      G ++ R+L+ +     + ++  RE Q    V+   +   +V 
Sbjct: 13  ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 68
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
             G      +  +  E+M  GSL  +L  A + P  I  +  IA  + +G+ YL ++   
Sbjct: 69  FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 124
Query: 148 QIIHCDIKPQNILMD 162
           +I+H D+KP NIL++
Sbjct: 125 KIMHRDVKPSNILVN 139

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 8   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 66  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIK 142

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 15/141 (10%)
Query: 32  FKEKVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRL 89
            KE++G G  G V +    +  + VA+ +  + L  + RE +  EI+++ + +H N+V  
Sbjct: 19  MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 78
Query: 90  LGYSLEVSK------KILVYEYMSNGSLADILFNAEKQPNWIE---RTGIARDIARGILY 140
                 + K       +L  EY   G L   L   E      E   RT ++ DI+  + Y
Sbjct: 79  REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRY 137
Query: 141 LHDECETQIIHCDIKPQNILM 161
           LH   E +IIH D+KP+NI++
Sbjct: 138 LH---ENRIIHRDLKPENIVL 155

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 9   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 67  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35  KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
           ++G G+ G V+K      G ++ R+L+ +     + ++  RE Q    V+   +   +V 
Sbjct: 13  ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 68
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
             G      +  +  E+M  GSL  +L  A + P  I  +  IA  + +G+ YL ++   
Sbjct: 69  FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 124
Query: 148 QIIHCDIKPQNILMD 162
           +I+H D+KP NIL++
Sbjct: 125 KIMHRDVKPSNILVN 139

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35  KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
           ++G G+ G V+K      G ++ R+L+ +     + ++  RE Q    V+   +   +V 
Sbjct: 13  ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 68
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
             G      +  +  E+M  GSL  +L  A + P  I  +  IA  + +G+ YL ++   
Sbjct: 69  FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 124
Query: 148 QIIHCDIKPQNILMD 162
           +I+H D+KP NIL++
Sbjct: 125 KIMHRDVKPSNILVN 139

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 15/141 (10%)
Query: 32  FKEKVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRL 89
            KE++G G  G V +    +  + VA+ +  + L  + RE +  EI+++ + +H N+V  
Sbjct: 18  MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 90  LGYSLEVSK------KILVYEYMSNGSLADILFNAEKQPNWIE---RTGIARDIARGILY 140
                 + K       +L  EY   G L   L   E      E   RT ++ DI+  + Y
Sbjct: 78  REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRY 136
Query: 141 LHDECETQIIHCDIKPQNILM 161
           LH   E +IIH D+KP+NI++
Sbjct: 137 LH---ENRIIHRDLKPENIVL 154

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 10  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 68  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIK 144

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35  KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
           ++G G+ G V+K      G ++ R+L+ +     + ++  RE Q    V+   +   +V 
Sbjct: 13  ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 68
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
             G      +  +  E+M  GSL  +L  A + P  I  +  IA  + +G+ YL ++   
Sbjct: 69  FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 124
Query: 148 QIIHCDIKPQNILMD 162
           +I+H D+KP NIL++
Sbjct: 125 KIMHRDVKPSNILVN 139

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35  KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
           ++G G+ G V+K      G ++ R+L+ +     + ++  RE Q    V+   +   +V 
Sbjct: 75  ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 130
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
             G      +  +  E+M  GSL  +L  A + P  I  +  IA  + +G+ YL ++   
Sbjct: 131 FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 186
Query: 148 QIIHCDIKPQNILMD 162
           +I+H D+KP NIL++
Sbjct: 187 KIMHRDVKPSNILVN 201

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 19/152 (12%)
Query: 20  FSYAELKKITDGFKE--KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREF 71
            +  ELK   D F++  ++G G+ G V+K      G ++ R+L+ +     + ++  RE 
Sbjct: 1   MALGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIREL 58
Query: 72  QTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGI 130
           Q    V+   +   +V   G      +  +  E+M  GSL  +L  A + P  I  +  I
Sbjct: 59  Q----VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 114
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMD 162
           A  + +G+ YL ++   +I+H D+KP NIL++
Sbjct: 115 A--VIKGLTYLREK--HKIMHRDVKPSNILVN 142

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35  KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
           ++G G+ G V+K      G ++ R+L+ +     + ++  RE Q    V+   +   +V 
Sbjct: 13  ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 68
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
             G      +  +  E+M  GSL  +L  A + P  I  +  IA  + +G+ YL ++   
Sbjct: 69  FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 124
Query: 148 QIIHCDIKPQNILMD 162
           +I+H D+KP NIL++
Sbjct: 125 KIMHRDVKPSNILVN 139

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 13  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 71  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIK 147

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 21/155 (13%)
Query: 27  KITDGF--KEKVGRGSSGTVYKGAMINRQLVAVNRLE---KVLDEREREFQTEIKVIGR- 80
           + TDG+  KE +G GS       ++  R +     +E   K++D+ +R+   EI+++ R 
Sbjct: 19  QFTDGYEVKEDIGVGSY------SVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRY 72
Query: 81  THHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER--TGIARDIARGI 138
             H N++ L     +     +V E M  G L D +    +Q  + ER  + +   I + +
Sbjct: 73  GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL---RQKFFSEREASAVLFTITKTV 129
Query: 139 LYLHDECETQIIHCDIKPQNIL-MDENRCAKNFRL 172
            YLH +    ++H D+KP NIL +DE+   ++ R+
Sbjct: 130 EYLHAQ---GVVHRDLKPSNILYVDESGNPESIRI 161

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 36  VGRGSSGTVYKGAMINRQLVAVNRLEKVL-----DERE-REFQTEIKVIGRTHHRNLVRL 89
           +G G  G+V +G +      ++    K +      +RE  EF +E   +    H N++RL
Sbjct: 42  LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 90  LGYSLEVS-----KKILVYEYMSNGSLADILFNA--EKQPNWIERTGIAR---DIARGIL 139
           LG  +E+S     K +++  +M  G L   L  +  E  P  I    + +   DIA G+ 
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 140 YLHDECETQIIHCDIKPQNILM--DENRCAKNFRL 172
           YL +      +H D+  +N ++  D   C  +F L
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGL 193

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35  KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
           ++G G+ G V+K      G ++ R+L+ +     + ++  RE Q    V+   +   +V 
Sbjct: 32  ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 87
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
             G      +  +  E+M  GSL  +L  A + P  I  +  IA  + +G+ YL ++   
Sbjct: 88  FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 143
Query: 148 QIIHCDIKPQNILMD 162
           +I+H D+KP NIL++
Sbjct: 144 KIMHRDVKPSNILVN 158

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L K+  + E E        EI ++   +H N+V+
Sbjct: 9   EKIGEGTYGVVYKAR--NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 67  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L K+  + E E        EI ++   +H N+V+
Sbjct: 8   EKIGEGTYGVVYKAR--NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 66  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KPQN+L++     K
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIK 142

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 35  KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           K+G GS+G V    + +  +LVAV +++    +R      E+ ++    H N+V +    
Sbjct: 31  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
           L   +  +V E++  G+L DI+ +       I    +A  + + +  LH +    +IH D
Sbjct: 91  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA--VLQALSVLHAQG---VIHRD 145
Query: 154 IKPQNILMDEN 164
           IK  +IL+  +
Sbjct: 146 IKSDSILLTHD 156

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 35  KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           K+G GS+G V    + +  +LVAV +++    +R      E+ ++    H N+V +    
Sbjct: 27  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
           L   +  +V E++  G+L DI+ +       I    +A  + + +  LH +    +IH D
Sbjct: 87  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA--VLQALSVLHAQG---VIHRD 141
Query: 154 IKPQNILMDEN 164
           IK  +IL+  +
Sbjct: 142 IKSDSILLTHD 152

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTV--YKGAMINR---QLVAVNRLEKVLDERERE- 70
           P  F    LKKI D     +G G  G V  Y     N    ++VAV  L+     + R  
Sbjct: 25  PTVFHKRYLKKIRD-----LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSG 79
Query: 71  FQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPNWIERT 128
           ++ EI ++   +H ++++  G   +     L  V EY+  GSL D L          +  
Sbjct: 80  WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQLL 137
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             A+ I  G+ YLH +     IH D+  +N+L+D +R  K
Sbjct: 138 LFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVK 174

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 35  KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           K+G GS+G V    + +  +LVAV +++    +R      E+ ++    H N+V +    
Sbjct: 38  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
           L   +  +V E++  G+L DI+ +       I    +A  + + +  LH +    +IH D
Sbjct: 98  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA--VLQALSVLHAQG---VIHRD 152
Query: 154 IKPQNILMDEN 164
           IK  +IL+  +
Sbjct: 153 IKSDSILLTHD 163

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 34  EKVGRGSSGTVYKG---AMINRQL-VAVNRLEK-VLDERER--EFQTEIKVIGRTHHRNL 86
           EK+G GS G V +G   A   + + VAV  L+  VL + E   +F  E+  +    HRNL
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           +RL G  L    K +V E    GSL D L   +        +  A  +A G+ YL  +  
Sbjct: 84  IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 140
Query: 147 TQIIHCDIKPQNILM 161
            + IH D+  +N+L+
Sbjct: 141 -RFIHRDLAARNLLL 154

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 34  EKVGRGSSGTVYKG---AMINRQL-VAVNRLEK-VLDERER--EFQTEIKVIGRTHHRNL 86
           EK+G GS G V +G   A   + + VAV  L+  VL + E   +F  E+  +    HRNL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           +RL G  L    K +V E    GSL D L   +        +  A  +A G+ YL  +  
Sbjct: 74  IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 130
Query: 147 TQIIHCDIKPQNILM 161
            + IH D+  +N+L+
Sbjct: 131 -RFIHRDLAARNLLL 144

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 34  EKVGRGSSGTVYKG---AMINRQL-VAVNRLEK-VLDERER--EFQTEIKVIGRTHHRNL 86
           EK+G GS G V +G   A   + + VAV  L+  VL + E   +F  E+  +    HRNL
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           +RL G  L    K +V E    GSL D L   +        +  A  +A G+ YL  +  
Sbjct: 84  IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 140
Query: 147 TQIIHCDIKPQNILM 161
            + IH D+  +N+L+
Sbjct: 141 -RFIHRDLAARNLLL 154

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 35  KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           K+G GS+G V    + +  +LVAV +++    +R      E+ ++    H N+V +    
Sbjct: 36  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
           L   +  +V E++  G+L DI+ +       I    +A  + + +  LH +    +IH D
Sbjct: 96  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA--VLQALSVLHAQG---VIHRD 150
Query: 154 IKPQNILMDEN 164
           IK  +IL+  +
Sbjct: 151 IKSDSILLTHD 161

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 36  VGRGSSGTVYKGAMIN----RQLVAVNRLEKV-LDERER-EFQTEIKVIGRTHHRNLVRL 89
           +G+GS G V+    I+    RQL A+  L+K  L  R+R   + E  ++   +H  +V+L
Sbjct: 32  LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 90  LGYSLEVSKKI-LVYEYMSNGSL-----ADILFNAEKQPNWIERTGIARDIARGILYLHD 143
             Y+ +   K+ L+ +++  G L      +++F  E    ++    +A D      +LH 
Sbjct: 92  -HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLHS 144
Query: 144 ECETQIIHCDIKPQNILMDE 163
                II+ D+KP+NIL+DE
Sbjct: 145 ---LGIIYRDLKPENILLDE 161

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 34  EKVGRGSSGTVYKG---AMINRQL-VAVNRLEK-VLDERER--EFQTEIKVIGRTHHRNL 86
           EK+G GS G V +G   A   + + VAV  L+  VL + E   +F  E+  +    HRNL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           +RL G  L    K +V E    GSL D L   +        +  A  +A G+ YL  +  
Sbjct: 74  IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 130
Query: 147 TQIIHCDIKPQNILM 161
            + IH D+  +N+L+
Sbjct: 131 -RFIHRDLAARNLLL 144

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 34  EKVGRGSSGTVYKG---AMINRQL-VAVNRLEK-VLDERER--EFQTEIKVIGRTHHRNL 86
           EK+G GS G V +G   A   + + VAV  L+  VL + E   +F  E+  +    HRNL
Sbjct: 18  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           +RL G  L    K +V E    GSL D L   +        +  A  +A G+ YL  +  
Sbjct: 78  IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 134
Query: 147 TQIIHCDIKPQNILM 161
            + IH D+  +N+L+
Sbjct: 135 -RFIHRDLAARNLLL 148

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 34  EKVGRGSSGTVYKG---AMINRQL-VAVNRLEK-VLDERER--EFQTEIKVIGRTHHRNL 86
           EK+G GS G V +G   A   + + VAV  L+  VL + E   +F  E+  +    HRNL
Sbjct: 18  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           +RL G  L    K +V E    GSL D L   +        +  A  +A G+ YL  +  
Sbjct: 78  IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 134
Query: 147 TQIIHCDIKPQNILM 161
            + IH D+  +N+L+
Sbjct: 135 -RFIHRDLAARNLLL 148

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 34  EKVGRGSSGTVYKG---AMINRQL-VAVNRLEK-VLDERER--EFQTEIKVIGRTHHRNL 86
           EK+G GS G V +G   A   + + VAV  L+  VL + E   +F  E+  +    HRNL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           +RL G  L    K +V E    GSL D L   +        +  A  +A G+ YL  +  
Sbjct: 74  IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 130
Query: 147 TQIIHCDIKPQNILM 161
            + IH D+  +N+L+
Sbjct: 131 -RFIHRDLAARNLLL 144

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 36  VGRGSSGTVYKGAMIN----RQLVAVNRLEKV-LDERER-EFQTEIKVIGRTHHRNLVRL 89
           +G+GS G V+    I+    RQL A+  L+K  L  R+R   + E  ++   +H  +V+L
Sbjct: 32  LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 90  LGYSLEVSKKI-LVYEYMSNGSL-----ADILFNAEKQPNWIERTGIARDIARGILYLHD 143
             Y+ +   K+ L+ +++  G L      +++F  E    ++    +A D      +LH 
Sbjct: 92  -HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLHS 144
Query: 144 ECETQIIHCDIKPQNILMDE 163
                II+ D+KP+NIL+DE
Sbjct: 145 ---LGIIYRDLKPENILLDE 161

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 15  TTPFSFSYAELKKITDGFK--EKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDERE 68
            TP  F  ++   +++ ++  +K+G G+ G V     K   + R  + + R   V     
Sbjct: 22  ATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERA-IKIIRKTSVSTSSN 80
Query: 69  REFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT 128
            +   E+ V+    H N+++L  +  +     LV E    G L D + +  K  N ++  
Sbjct: 81  SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-FNEVDAA 139
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNILMD 162
            I + +  G+ YLH   +  I+H D+KP+N+L++
Sbjct: 140 VIIKQVLSGVTYLH---KHNIVHRDLKPENLLLE 170

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 20  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 75  MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 129
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 130 --IAKGMNYLEDR---RLVHRDLAARNVLV 154

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 36  VGRGSSGTVYKGAMIN----RQLVAVNRLEKV-LDERER-EFQTEIKVIGRTHHRNLVRL 89
           +G+GS G V+    I+    RQL A+  L+K  L  R+R   + E  ++   +H  +V+L
Sbjct: 33  LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 90  LGYSLEVSKKI-LVYEYMSNGSL-----ADILFNAEKQPNWIERTGIARDIARGILYLHD 143
             Y+ +   K+ L+ +++  G L      +++F  E    ++    +A D      +LH 
Sbjct: 93  -HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLHS 145
Query: 144 ECETQIIHCDIKPQNILMDE 163
                II+ D+KP+NIL+DE
Sbjct: 146 ---LGIIYRDLKPENILLDE 162

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 20  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 75  MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 129
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 130 --IAKGMNYLEDR---RLVHRDLAARNVLV 154

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 32  FKEKVGRGSSGTVYKGAMINRQL-VAVNRLE-KVLDERERE-FQTEIKVIGRTHHRNLVR 88
           F  ++GRGS  TVYKG      + VA   L+ + L + ER+ F+ E + +    H N+VR
Sbjct: 30  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 89  LLGYSLEVSKK-----ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
               S E + K     +LV E  ++G+L   L   +     + R+   R I +G+ +LH 
Sbjct: 90  FYD-SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW-CRQILKGLQFLHT 147
Query: 144 ECETQIIHCDIKPQNILM 161
                IIH D+K  NI +
Sbjct: 148 RT-PPIIHRDLKCDNIFI 164

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 17  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW       
Sbjct: 72  MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------C 124
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 125 VQIAKGMNYLEDR---RLVHRDLAARNVLV 151

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 9   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++    L D +       +    TGI   + +  L+   +    
Sbjct: 67  LLDVIHTENKLYLVFEFLHQ-DLKDFM-------DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KP+N+L++     K
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIK 143

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 18  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 73  MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 127
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 128 --IAKGMNYLEDR---RLVHRDLAARNVLV 152

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 18  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 73  MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 127
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 128 --IAKGMNYLEDR---RLVHRDLAARNVLV 152

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 35  KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           K+G GS+G V    + +  +LVAV +++    +R      E+ ++    H N+V +    
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
           L   +  +V E++  G+L DI+ +       I    +A  + + +  LH +    +IH D
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA--VLQALSVLHAQG---VIHRD 272
Query: 154 IKPQNILMDEN 164
           IK  +IL+  +
Sbjct: 273 IKSDSILLTHD 283

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 16  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW       
Sbjct: 71  MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLV 150

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 18  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 73  MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 127
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 128 --IAKGMNYLEDR---RLVHRDLAARNVLV 152

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 35  KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           K+G GS+G V    + +  +LVAV +++    +R      E+ ++    H N+V +    
Sbjct: 81  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 94  LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
           L   +  +V E++  G+L DI+ +       I    +A  + + +  LH +    +IH D
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA--VLQALSVLHAQG---VIHRD 195
Query: 154 IKPQNILMDEN 164
           IK  +IL+  +
Sbjct: 196 IKSDSILLTHD 206

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 19  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 74  MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 128
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 129 --IAKGMNYLEDR---RLVHRDLAARNVLV 153

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 10  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 64
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 65  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 119
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 120 --IAKGMNYLEDR---RLVHRDLAARNVLV 144

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 18/139 (12%)
Query: 36  VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
           +G GS G VY+  + +  +LVA+   +KVL ++ R    E++++ +  H N+VRL    Y
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
           S    KK +VY  +    + + ++   +  +  ++T            + R + Y+H   
Sbjct: 84  S-SGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 139
Query: 146 ETQIIHCDIKPQNILMDEN 164
              I H DIKPQN+L+D +
Sbjct: 140 SFGICHRDIKPQNLLLDPD 158

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 26/148 (17%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 12  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIAR--------GILY 140
           LL      +K  LV+E++          + +K  +    TGI   + +        G+ +
Sbjct: 70  LLDVIHTENKLYLVFEHVDQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 141 LHDECETQIIHCDIKPQNILMDENRCAK 168
            H     +++H D+KPQN+L++     K
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIK 146

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 27/151 (17%)
Query: 23  AELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIK 76
            E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  
Sbjct: 40  TEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 77  VIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGI 130
           V+    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +   
Sbjct: 95  VMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 150
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILM 161
              IA+G+ YL D    +++H D+  +N+L+
Sbjct: 151 ---IAKGMNYLEDR---RLVHRDLAARNVLV 175

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 19  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 74  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 128
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 129 --IAKGMNYLEDR---RLVHRDLAARNVLV 153

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 17  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 72  MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ---- 126
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 127 --IAKGMNYLEDR---RLVHRDLAARNVLV 151

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 18  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 73  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 127
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 128 --IAKGMNYLEDR---RLVHRDLAARNVLV 152

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 19  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 74  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 128
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 129 --IAKGMNYLEDR---RLVHRDLAARNVLV 153

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 26/148 (17%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 12  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 89  LLGYSLEVSKKILVYE--------YMSNGSLADILFNAEKQPNWIERTGIARDIARGILY 140
           LL      +K  LV+E        +M   +L  I     K             + +G+ +
Sbjct: 70  LLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKS--------YLFQLLQGLAF 121
Query: 141 LHDECETQIIHCDIKPQNILMDENRCAK 168
            H     +++H D+KPQN+L++     K
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIK 146

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 19  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 74  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 128
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 129 --IAKGMNYLEDR---RLVHRDLAARNVLV 153

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 22  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 76
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 77  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 131
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 132 --IAKGMNYLEDR---RLVHRDLAARNVLV 156

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 16  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW       
Sbjct: 71  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLV 150

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 26  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 80
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 81  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 135
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 136 --IAKGMNYLEDR---RLVHRDLAARNVLV 160

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 68  EREFQTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI 125
           E   + EI+++ R  H+N+++L+   Y+ E  K  +V EY   G    +    EK+    
Sbjct: 50  EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVC 109
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILM 161
           +  G    +  G+ YLH +    I+H DIKP N+L+
Sbjct: 110 QAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLL 142

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 16  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 71  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 125
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 126 --IAKGMNYLEDR---RLVHRDLAARNVLV 150

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 16  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 71  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 125
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 126 --IAKGMNYLEDR---RLVHRDLAARNVLV 150

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 18  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 73  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 127
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 128 --IAKGMNYLEDR---RLVHRDLAARNVLV 152

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 23  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 78  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 132
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 133 --IAKGMNYLEDR---RLVHRDLAARNVLV 157

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 35  KVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDER--EREFQTEIKVIGRTHHRNLVRL 89
           K+G GS G V+K    NR   Q+VA+ +  +  D+   ++    EI+++ +  H NLV L
Sbjct: 10  KIGEGSYGVVFKCR--NRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNL 67
Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
           L       +  LV+EY  +  L ++       P  + ++ I     + + + H   +   
Sbjct: 68  LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKS-ITWQTLQAVNFCH---KHNC 123
Query: 150 IHCDIKPQNILMDENRCAK 168
           IH D+KP+NIL+ ++   K
Sbjct: 124 IHRDVKPENILITKHSVIK 142

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 23  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 78  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 132
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 133 --IAKGMNYLEDR---RLVHRDLAARNVLV 157

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 26/148 (17%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 8   EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 89  LLGYSLEVSKKILVYE--------YMSNGSLADILFNAEKQPNWIERTGIARDIARGILY 140
           LL      +K  LV+E        +M   +L  I     K             + +G+ +
Sbjct: 66  LLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIK--------SYLFQLLQGLAF 117
Query: 141 LHDECETQIIHCDIKPQNILMDENRCAK 168
            H     +++H D+KPQN+L++     K
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIK 142

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 10  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 68  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KP+N+L++     K
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIK 144

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 36  VGRGSSGTVYKGAMINRQ------LVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNLVR 88
           +G G  G V K    + +       VAV  L++     E R+  +E  V+ + +H ++++
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEK-QPNWI---------------ERT---- 128
           L G   +    +L+ EY   GSL   L  + K  P ++               ER     
Sbjct: 91  LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 129 ---GIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
                A  I++G+ YL    E +++H D+  +NIL+ E R  K
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMK 190

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 36  VGRGSSGTVYKGAMINRQ------LVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNLVR 88
           +G G  G V K    + +       VAV  L++     E R+  +E  V+ + +H ++++
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEK-QPNWI---------------ERT---- 128
           L G   +    +L+ EY   GSL   L  + K  P ++               ER     
Sbjct: 91  LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 129 ---GIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
                A  I++G+ YL    E +++H D+  +NIL+ E R  K
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMK 190

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK    N+    V  L+K+  + E E        EI ++   +H N+V+
Sbjct: 11  EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
           LL      +K  LV+E++          + +K  +    TGI   + +  L+   +    
Sbjct: 69  LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
           C +  ++H D+KP+N+L++     K
Sbjct: 121 CHSHRVLHRDLKPENLLINTEGAIK 145

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24  ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
           E KKI     + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V
Sbjct: 16  EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
           +    + ++ RLLG  L  S   L+ + M  G L D +        ++   NW  +    
Sbjct: 71  MASVDNPHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ---- 125
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
             IA+G+ YL D    +++H D+  +N+L+
Sbjct: 126 --IAKGMNYLEDR---RLVHRDLAARNVLV 150

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	183
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-61
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	8e-59
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	9e-58
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-41
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	7e-40
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-39
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	7e-39
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	9e-39
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-38
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-37
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-37
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-36
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-35
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-34
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-32
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-32
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-31
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-31
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-27
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-25
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-25
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-24
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-24
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-23
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-23
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-23
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-23
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-23
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-23
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	6e-23
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	6e-23
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	9e-23
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-22
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-22
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-22
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-22
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-22
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-22
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-22
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-22
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-22
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-22
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-22
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-21
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-21
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-21
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-21
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-21
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-21
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-21
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-21
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-21
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	4e-21
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	4e-21
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-20
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-20
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-20
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-20
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-20
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-20
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-20
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-20
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-20
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-20
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-20
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	6e-20
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	6e-20
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-20
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-19
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-19
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-19
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-19
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-19
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-19
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-19
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-19
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-19
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-19
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-19
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-19
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-19
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	8e-19
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	8e-19
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-18
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-18
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-18
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-18
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-18
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-18
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	5e-18
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	7e-18
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	8e-18
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-17
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-17
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	6e-17
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	8e-17
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-16
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-16
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-16
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-16
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	5e-16
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	5e-16
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	6e-16
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	7e-16
2a19_B	284	Interferon-induced, double-stranded RNA-activated	8e-16
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	9e-16
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-15
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-15
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-15
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-15
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-15
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	3e-15
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-15
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-15
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	5e-15
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	6e-15
3niz_A	311	Rhodanese family protein; structural genomics, str	6e-15
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-15
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	7e-15
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	8e-15
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-14
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-14
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-14
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-14
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-14
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-14
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-14
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	4e-14
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-14
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	7e-14
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	8e-14
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	9e-14
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-13
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-13
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-13
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-13
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-13
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-13
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-13
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-13
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-13
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-13
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	6e-13
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	8e-13
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	8e-13
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-12
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-12
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-12
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-12
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-12
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-12
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-12
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-12
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-12
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-12
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-12
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-12
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-12
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	5e-12
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-12
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	5e-12
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	7e-12
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	8e-12
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	8e-12
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	8e-12
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	9e-12
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	9e-12
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-11
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-11
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-11
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	6e-11
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-10
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-10
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-10
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-10
3rp9_A	458	Mitogen-activated protein kinase; structural genom	3e-10
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-10
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	7e-10
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-09
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-09
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-09
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	5e-09
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	7e-09
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-08
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	3e-08
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	5e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	5e-08
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-08
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	7e-08
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	7e-08
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	7e-08
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	9e-08
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-07
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-07
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-07
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	2e-07
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-07
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-07
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-07
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-07
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-07
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	6e-07
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	8e-07
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-06
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-06
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	3e-06
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-06
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	4e-06
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	6e-06
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-05
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-05
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-05
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	2e-05
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-05
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-05
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-05
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-05
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	4e-05
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	5e-05
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	5e-05
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	7e-05
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-04
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	1e-04
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	5e-04
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	6e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  192 bits (490), Expect = 2e-61
 Identities = 67/160 (41%), Positives = 93/160 (58%), Gaps = 14/160 (8%)

Query: 19  SFSYAELKKITDGFKE--KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE-----REREF 71
            FS  EL+  +D F     +GRG  G VYKG + +  LVAV    K L E      E +F
Sbjct: 19  RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAV----KRLKEERTQGGELQF 74

Query: 72  QTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP---NWIERT 128
           QTE+++I    HRNL+RL G+ +  ++++LVY YM+NGS+A  L    +     +W +R 
Sbjct: 75  QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 134

Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            IA   ARG+ YLHD C+ +IIH D+K  NIL+DE   A 
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  185 bits (471), Expect = 8e-59
 Identities = 69/164 (42%), Positives = 90/164 (54%), Gaps = 18/164 (10%)

Query: 19  SFSYAELKKITDGFKE--------KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDER--- 67
           SFS+ ELK +T+ F E        K+G G  G VYKG  +N   VAV +L  ++D     
Sbjct: 14  SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 72

Query: 68  -EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NW 124
            +++F  EIKV+ +  H NLV LLG+S +     LVY YM NGSL D L   +  P  +W
Sbjct: 73  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132

Query: 125 IERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             R  IA+  A GI +LH+      IH DIK  NIL+DE   AK
Sbjct: 133 HMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAK 173

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  182 bits (465), Expect = 9e-58
 Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 8/165 (4%)

Query: 9   SNYSTLTTPFSFSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEKVLDE 66
           S+Y      +     +L++ T+ F  K  +G G  G VYKG + +   VA+ R      +
Sbjct: 18  SSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ 77

Query: 67  REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP---N 123
              EF+TEI+ +    H +LV L+G+  E ++ IL+Y+YM NG+L   L+ ++      +
Sbjct: 78  GIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMS 137

Query: 124 WIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           W +R  I    ARG+ YLH      IIH D+K  NIL+DEN   K
Sbjct: 138 WEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPK 179

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  141 bits (356), Expect = 1e-41
 Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 23/170 (13%)

Query: 15  TTPFSFSYAELKKITDGFK--EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERER--- 69
           ++        L   +   +  E   RG  G V+K   +  + VAV    K+   +++   
Sbjct: 9   SSGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKA-QLLNEYVAV----KIFPIQDKQSW 63

Query: 70  EFQTEIKVIGRTHHRNLVRLLGYSLEVSK----KILVYEYMSNGSLADILFNAEKQPNWI 125
           + + E+  +    H N+++ +G     +       L+  +   GSL+D L       +W 
Sbjct: 64  QNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA--NVVSWN 121

Query: 126 ERTGIARDIARGILYLHDECETQ-------IIHCDIKPQNILMDENRCAK 168
           E   IA  +ARG+ YLH++           I H DIK +N+L+  N  A 
Sbjct: 122 ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  136 bits (345), Expect = 7e-40
 Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 6/141 (4%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRL--EKVLDEREREFQTEIKVIGRTHHRNLVRL 89
            KEK+G GS GTV++    +   VAV  L  +    ER  EF  E+ ++ R  H N+V  
Sbjct: 41  IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAE--KQPNWIERTGIARDIARGILYLHDECET 147
           +G   +     +V EY+S GSL  +L  +   +Q +   R  +A D+A+G+ YLH     
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNP 158

Query: 148 QIIHCDIKPQNILMDENRCAK 168
            I+H ++K  N+L+D+    K
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVK 179

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  134 bits (340), Expect = 1e-39
 Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 7/150 (4%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE----REREFQTEIKVIGRTHHRNLV 87
            +E +G G  G VY+        VAV       DE         + E K+     H N++
Sbjct: 11  LEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
            L G  L+     LV E+   G L  +L  + K+         A  IARG+ YLHDE   
Sbjct: 70  ALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWAVQIARGMNYLHDEAIV 127

Query: 148 QIIHCDIKPQNILMDENRCAKNFRLWIGKV 177
            IIH D+K  NIL+ +     +    I K+
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKI 157

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  133 bits (336), Expect = 7e-39
 Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 11/149 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMINR-QLVAVNRL-------EKVLDEREREFQTEIKVIGRTHH 83
           +++++G+G  G V+KG ++    +VA+  L       E  + E+ +EFQ E+ ++   +H
Sbjct: 23  YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
            N+V+L G         +V E++  G L   L +      W  +  +  DIA GI Y+ +
Sbjct: 83  PNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140

Query: 144 ECETQIIHCDIKPQNILMDENRCAKNFRL 172
                I+H D++  NI +           
Sbjct: 141 -QNPPIVHRDLRSPNIFLQSLDENAPVCA 168

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  133 bits (337), Expect = 9e-39
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 4/138 (2%)

Query: 32  FKEKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
             E +G+G  G   K       +++ +  L +  +E +R F  E+KV+    H N+++ +
Sbjct: 14  HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G   +  +   + EY+  G+L  I+ + + Q  W +R   A+DIA G+ YLH      II
Sbjct: 74  GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NII 130

Query: 151 HCDIKPQNILMDENRCAK 168
           H D+   N L+ EN+   
Sbjct: 131 HRDLNSHNCLVRENKNVV 148

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  133 bits (336), Expect = 1e-38
 Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 13/150 (8%)

Query: 22  YAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRT 81
           Y E++      +E VGRG+ G V K      + VA+ ++E   +   + F  E++ + R 
Sbjct: 7   YKEIE-----VEEVVGRGAFGVVCKAKW-RAKDVAIKQIES--ESERKAFIVELRQLSRV 58

Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NWIERTGIARDIARGIL 139
           +H N+V+L G  L      LV EY   GSL ++L  AE  P              ++G+ 
Sbjct: 59  NHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116

Query: 140 YLHDECETQIIHCDIKPQNILMDEN-RCAK 168
           YLH      +IH D+KP N+L+       K
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLK 146

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  129 bits (327), Expect = 1e-37
 Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 7/142 (4%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRL--EKVLDEREREFQTEIKVIGRTHHRNLVRL 89
           F  K+    SG ++KG       + V  L        + R+F  E   +    H N++ +
Sbjct: 14  FLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPV 72

Query: 90  LGYSLE--VSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECE 146
           LG           L+  +M  GSL ++L        +  +    A D+ARG+ +LH   E
Sbjct: 73  LGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LE 131

Query: 147 TQIIHCDIKPQNILMDENRCAK 168
             I    +  +++++DE+  A+
Sbjct: 132 PLIPRHALNSRSVMIDEDMTAR 153

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  130 bits (328), Expect = 3e-37
 Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 23/165 (13%)

Query: 20  FSYAELKKITDGFK--EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERER-EFQTEIK 76
            + +E     D  K  E +GRG  G VYKG++ + + VAV    KV     R  F  E  
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAV----KVFSFANRQNFINEKN 57

Query: 77  V--IGRTHHRNLVRLLGYSLEVS-----KKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
           +  +    H N+ R +     V+     + +LV EY  NGSL   L       +W+    
Sbjct: 58  IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL--HTSDWVSSCR 115

Query: 130 IARDIARGILYLHDE------CETQIIHCDIKPQNILMDENRCAK 168
           +A  + RG+ YLH E       +  I H D+  +N+L+  +    
Sbjct: 116 LAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  127 bits (321), Expect = 3e-36
 Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 7/137 (5%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRL--EKVLDEREREFQTEIKVIGRTHHRNLVRL 89
             E +G+G  G VY G       VA+  +  E+  +++ + F+ E+    +T H N+V  
Sbjct: 37  IGELIGKGRFGQVYHG--RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
           +G  +      ++       +L  ++ +A+   +  +   IA++I +G+ YLH +    I
Sbjct: 95  MGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GI 151

Query: 150 IHCDIKPQNILMDENRC 166
           +H D+K +N+  D  + 
Sbjct: 152 LHKDLKSKNVFYDNGKV 168

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  121 bits (306), Expect = 3e-34
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 8/139 (5%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRL--EKVLDEREREFQTEIKVIGRTHHRNLVRL 89
             +++G GS GTVYKG       VAV  L       ++ + F+ E+ V+ +T H N++  
Sbjct: 28  VGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
           +GYS      I V ++    SL   L  +E +    +   IAR  ARG+ YLH +    I
Sbjct: 86  MGYSTAPQLAI-VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SI 141

Query: 150 IHCDIKPQNILMDENRCAK 168
           IH D+K  NI + E+   K
Sbjct: 142 IHRDLKSNNIFLHEDNTVK 160

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  116 bits (293), Expect = 2e-32
 Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 19/149 (12%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE---FQTEIKVIGRTHHRNLVR 88
             E VG+G  G V++G+    + VAV    K+   R+ +    +TE+       H N++ 
Sbjct: 12  LLECVGKGRYGEVWRGSWQG-ENVAV----KIFSSRDEKSWFRETELYNTVMLRHENILG 66

Query: 89  LLGYSLEVSKKI----LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
            +   +          L+  Y   GSL D L       + +    I   IA G+ +LH E
Sbjct: 67  FIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIE 124

Query: 145 CETQ-----IIHCDIKPQNILMDENRCAK 168
                    I H D+K +NIL+ +N    
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCC 153

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  117 bits (294), Expect = 3e-32
 Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 19/149 (12%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVR 88
             +++G+G  G V+ G     + VAV    KV    +E     +TEI       H N++ 
Sbjct: 41  MVKQIGKGRYGEVWMGKWRG-EKVAV----KVFFTTEEASWFRETEIYQTVLMRHENILG 95

Query: 89  LLGYSLEVSKKI----LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
            +   ++ +       L+ +Y  NGSL D L +     +      +A     G+ +LH E
Sbjct: 96  FIAADIKGTGSWTQLYLITDYHENGSLYDYLKS--TTLDAKSMLKLAYSSVSGLCHLHTE 153

Query: 145 CETQ-----IIHCDIKPQNILMDENRCAK 168
             +      I H D+K +NIL+ +N    
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCC 182

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  114 bits (286), Expect = 4e-31
 Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 19/149 (12%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE---FQTEIKVIGRTHHRNLVR 88
            +E +G+G  G V++G     + VAV    K+   RE      + EI       H N++ 
Sbjct: 46  LQESIGKGRFGEVWRGKW-RGEEVAV----KIFSSREERSWFREAEIYQTVMLRHENILG 100

Query: 89  LLGYSLEVSKKI----LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
            +    + +       LV +Y  +GSL D L              +A   A G+ +LH E
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHME 158

Query: 145 CETQ-----IIHCDIKPQNILMDENRCAK 168
                    I H D+K +NIL+ +N    
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCC 187

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  102 bits (255), Expect = 6e-27
 Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 13/142 (9%)

Query: 32  FKEKVGRGSSGTVYKGAMINR---QLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNL 86
           F  ++GRGS  TVYKG  ++      VA    +  K+     + F+ E +++    H N+
Sbjct: 30  FDIEIGRGSFKTVYKG--LDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 87

Query: 87  VRLLGYSLEVSKK----ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH 142
           VR         K     +LV E M++G+L   L    K           R I +G+ +LH
Sbjct: 88  VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYL-KRFKVMKIKVLRSWCRQILKGLQFLH 146

Query: 143 DECETQIIHCDIKPQNILMDEN 164
                 IIH D+K  NI +   
Sbjct: 147 -TRTPPIIHRDLKCDNIFITGP 167

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 98.6 bits (246), Expect = 3e-25
 Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 6/136 (4%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
            K+G GS+G V       + + VAV  ++    +R      E+ ++    H N+V +   
Sbjct: 51  VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            L   +  ++ E++  G+L DI+         I    +   + + + YLH +    +IH 
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQVRLNEEQI--ATVCEAVLQALAYLHAQ---GVIHR 165

Query: 153 DIKPQNILMDENRCAK 168
           DIK  +IL+  +   K
Sbjct: 166 DIKSDSILLTLDGRVK 181

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 97.8 bits (244), Expect = 3e-25
 Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 6/136 (4%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           EK+G+G+SGTVY    +   Q VA+ ++      ++     EI V+    + N+V  L  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            L   +  +V EY++ GSL D++         I    + R+  + + +LH     Q+IH 
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLHSN---QVIHR 140

Query: 153 DIKPQNILMDENRCAK 168
           DIK  NIL+  +   K
Sbjct: 141 DIKSDNILLGMDGSVK 156

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 95.5 bits (238), Expect = 2e-24
 Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 4/136 (2%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
            ++G G+ G VYK        L A   +E   +E   ++  EI+++    H  +V+LLG 
Sbjct: 25  GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 84

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
                K  ++ E+   G++  I+   ++     +   + R +   + +LH +   +IIH 
Sbjct: 85  YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHR 141

Query: 153 DIKPQNILMDENRCAK 168
           D+K  N+LM      +
Sbjct: 142 DLKAGNVLMTLEGDIR 157

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 94.3 bits (235), Expect = 5e-24
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 10/135 (7%)

Query: 33  KEKVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL 89
           +  +G+G+ G VY G   +      +A+  + +      +    EI +     H+N+V+ 
Sbjct: 27  RVVLGKGTYGIVYAG--RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 84

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT--GIARDIARGILYLHDECET 147
           LG   E     +  E +  GSL+ +L +        E+T     + I  G+ YLHD    
Sbjct: 85  LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN--- 141

Query: 148 QIIHCDIKPQNILMD 162
           QI+H DIK  N+L++
Sbjct: 142 QIVHRDIKGDNVLIN 156

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 93.9 bits (234), Expect = 1e-23
 Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 14/141 (9%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNR--LEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           E +G G++  V        ++ VA+ R  LEK     + E   EI+ + + HH N+V   
Sbjct: 21  EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHPNIVSYY 79

Query: 91  GYSLEVSKKILVYEYMSNGSLADIL----FNAEKQPNWIERTGIA---RDIARGILYLHD 143
              +   +  LV + +S GS+ DI+       E +   ++ + IA   R++  G+ YLH 
Sbjct: 80  TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139

Query: 144 ECETQIIHCDIKPQNILMDEN 164
                 IH D+K  NIL+ E+
Sbjct: 140 N---GQIHRDVKAGNILLGED 157

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 93.1 bits (232), Expect = 1e-23
 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 4/154 (2%)

Query: 15  TTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTE 74
           T    +   E+      F +++G G  G V  G    +  VA+  + K     E EF  E
Sbjct: 11  TAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEE 69

Query: 75  IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDI 134
            KV+    H  LV+L G   +     ++ EYM+NG L + L     +    +   + +D+
Sbjct: 70  AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 129

Query: 135 ARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
              + YL  +   Q +H D+  +N L+++    K
Sbjct: 130 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVK 160

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 94.2 bits (235), Expect = 2e-23
 Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 5/139 (3%)

Query: 32  FKEKVGRGSSGTVYKGAM-INRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVRL 89
             E++GRG+ G V+ G +  +  LVAV    E +  + + +F  E +++ +  H N+VRL
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
           +G   +     +V E +  G     L     +        +  D A G+ YL        
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCC 234

Query: 150 IHCDIKPQNILMDENRCAK 168
           IH D+  +N L+ E    K
Sbjct: 235 IHRDLAARNCLVTEKNVLK 253

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 92.3 bits (230), Expect = 2e-23
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 4/137 (2%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           F +++G G  G V+ G  +N+  VA+  + +     E +F  E +V+ +  H  LV+L G
Sbjct: 12  FVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
             LE +   LV E+M +G L+D L             G+  D+  G+ YL +     +IH
Sbjct: 71  VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIH 127

Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N L+ EN+  K
Sbjct: 128 RDLAARNCLVGENQVIK 144

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 92.3 bits (230), Expect = 4e-23
 Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMINR----QLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++        AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 29  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88

Query: 87  VRLLGYSLEVSKKIL-VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      L V  YM +G L + + N    P   +  G    +A+G+ YL    
Sbjct: 89  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA--- 145

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVK 168

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 91.5 bits (228), Expect = 4e-23
 Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 4/137 (2%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
             +++G G  G V  G    +  VAV  + K     E EF  E + + +  H  LV+  G
Sbjct: 12  LLKELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYG 70

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              +     +V EY+SNG L + L +  K     +   +  D+  G+ +L      Q IH
Sbjct: 71  VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIH 127

Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N L+D + C K
Sbjct: 128 RDLAARNCLVDRDLCVK 144

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 92.0 bits (229), Expect = 6e-23
 Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 15/137 (10%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNR--LEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           EK+G+GS G V+KG     +++VA+    LE+  DE E + Q EI V+ +     + +  
Sbjct: 28  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYVTKYY 86

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDECET 147
           G  L+ +K  ++ EY+  GS  D+L     +P  ++ T IA   R+I +G+ YLH E   
Sbjct: 87  GSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHSE--- 138

Query: 148 QIIHCDIKPQNILMDEN 164
           + IH DIK  N+L+ E+
Sbjct: 139 KKIHRDIKAANVLLSEH 155

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 92.0 bits (229), Expect = 6e-23
 Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 6/136 (4%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           EK+G GS G+VYK       Q+VA+ ++   ++   +E   EI ++ +    ++V+  G 
Sbjct: 35  EKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPHVVKYYGS 92

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
             + +   +V EY   GS++DI+    K     E   I +   +G+ YLH     + IH 
Sbjct: 93  YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHR 149

Query: 153 DIKPQNILMDENRCAK 168
           DIK  NIL++    AK
Sbjct: 150 DIKAGNILLNTEGHAK 165

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 91.7 bits (228), Expect = 9e-23
 Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 14/135 (10%)

Query: 33  KEKVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL 89
           + +VGRGS G V++    ++      AV    K +       + E+          +V L
Sbjct: 63  QPRVGRGSFGEVHRM--KDKQTGFQCAV----KKVRLEVFRVE-ELVACAGLSSPRIVPL 115

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
            G   E     +  E +  GSL  ++      P              G+ YLH     +I
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALY-YLGQALEGLEYLHTR---RI 171

Query: 150 IHCDIKPQNILMDEN 164
           +H D+K  N+L+  +
Sbjct: 172 LHGDVKADNVLLSSD 186

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 90.8 bits (226), Expect = 1e-22
 Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 14/158 (8%)

Query: 34  EKVGRGSSGTVYKGAMINR---QLVAVNRLEK-VLDEREREFQ-TEIKVIGR-THHRNLV 87
           EK+G G  G+V+K   + R    + A+ R +K +    + +    E+        H ++V
Sbjct: 17  EKIGSGEFGSVFKC--VKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 74

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDE 144
           R      E    ++  EY + GSLAD +    +  ++ +   +      + RG+ Y+H  
Sbjct: 75  RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 134

Query: 145 CETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARS 182
               ++H DIKP NI +              + D A +
Sbjct: 135 ---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 92.1 bits (229), Expect = 1e-22
 Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMINR----QLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNL 86
           F E +GRG  G VY G +++        AV  L ++ D  E  +F TE  ++    H N+
Sbjct: 93  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152

Query: 87  VRLLGYSLEVSKKIL-VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + LLG  L      L V  YM +G L + + N    P   +  G    +A+G+ +L    
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA--- 209

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             + +H D+  +N ++DE    K
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVK 232

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 90.8 bits (226), Expect = 2e-22
 Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 9/143 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-----RQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRN 85
            ++ +G G  G VYKG +          VA+  L+    E++R +F  E  ++G+  H N
Sbjct: 48  RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           ++RL G   +    +++ EYM NG+L   L   + + + ++  G+ R IA G+ YL    
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA--- 164

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
               +H D+  +NIL++ N   K
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCK 187

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 90.4 bits (225), Expect = 2e-22
 Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 8/142 (5%)

Query: 32  FKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNL 86
            ++ +G G SG V  G +         VA+  L+    ER+R +F +E  ++G+  H N+
Sbjct: 53  IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112

Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           +RL G        ++V EYM NGSL   L   + Q   ++  G+ R +  G+ YL    +
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---D 169

Query: 147 TQIIHCDIKPQNILMDENRCAK 168
              +H D+  +N+L+D N   K
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCK 191

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 90.0 bits (224), Expect = 3e-22
 Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 10/144 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMI-----NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL 86
           F +++G+G+ G+V             ++VAV +L+   +E  R+F+ EI+++    H N+
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73

Query: 87  VRLLGYSLEVSKK--ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
           V+  G      ++   L+ EY+  GSL D L   +++ + I+       I +G+ YL   
Sbjct: 74  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG-- 131

Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
              + IH D+  +NIL++     K
Sbjct: 132 -TKRYIHRDLATRNILVENENRVK 154

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 90.9 bits (226), Expect = 3e-22
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 8/142 (5%)

Query: 32  FKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNL 86
             + VG G  G V  G +         VA+  L+    E++R +F  E  ++G+  H N+
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108

Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           +RL G   +    ++V EYM NGSL   L   + Q   I+  G+ R IA G+ YL D   
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM-- 166

Query: 147 TQIIHCDIKPQNILMDENRCAK 168
              +H D+  +NIL++ N   K
Sbjct: 167 -GYVHRDLAARNILINSNLVCK 187

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 89.7 bits (223), Expect = 3e-22
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 11/145 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMI-----NRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRN 85
               +G G  G V             + VAV  L  +       + + EI+++   +H N
Sbjct: 25  RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHEN 84

Query: 86  LVRLLGYSLEVSKK--ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
           +V+  G   E       L+ E++ +GSL + L   + + N  ++   A  I +G+ YL  
Sbjct: 85  IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG- 143

Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
               Q +H D+  +N+L++     K
Sbjct: 144 --SRQYVHRDLAARNVLVESEHQVK 166

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 90.1 bits (224), Expect = 4e-22
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 10/144 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMI-----NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL 86
           +  ++G+G+ G+V              LVAV +L+    +++R+FQ EI+++   H   +
Sbjct: 27  YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86

Query: 87  VRLLGYSLEVSKK--ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
           V+  G S    ++   LV EY+ +G L D L     + +       +  I +G+ YL   
Sbjct: 87  VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG-- 144

Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
              + +H D+  +NIL++     K
Sbjct: 145 -SRRCVHRDLAARNILVESEAHVK 167

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 89.7 bits (223), Expect = 4e-22
 Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 10/144 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMI-----NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL 86
           F +++G+G+ G+V             ++VAV +L+   +E  R+F+ EI+++    H N+
Sbjct: 45  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104

Query: 87  VRLLGYSLEVSKK--ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
           V+  G      ++   L+ EY+  GSL D L   +++ + I+       I +G+ YL   
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG-- 162

Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
              + IH D+  +NIL++     K
Sbjct: 163 -TKRYIHRDLATRNILVENENRVK 185

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 90.4 bits (224), Expect = 5e-22
 Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 13/139 (9%)

Query: 34  EKVGRGSS--GTVYKGAMI-NRQLVAVNR--LEKVLDEREREFQTEIKVIGRTHHRNLVR 88
             +G+G     TV         + V V R  LE   +E     Q E+ V    +H N+V 
Sbjct: 31  TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVP 90

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDEC 145
                +  ++  +V  +M+ GS  D++       + +    IA   + + + + Y+H   
Sbjct: 91  YRATFIADNELWVVTSFMAYGSAKDLI--CTHFMDGMNELAIAYILQGVLKALDYIHHM- 147

Query: 146 ETQIIHCDIKPQNILMDEN 164
               +H  +K  +IL+  +
Sbjct: 148 --GYVHRSVKASHILISVD 164

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 89.4 bits (222), Expect = 6e-22
 Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 23/145 (15%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRT-HHRNLVR 88
           E VG G+ G VYKG  +   QL A+    KV+D   + E E + EI ++ +  HHRN+  
Sbjct: 30  ELVGNGTYGQVYKGRHVKTGQLAAI----KVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85

Query: 89  LLGYSLEVSKKI------LVYEYMSNGSLADILFNAEKQP---NWIERTGIARDIARGIL 139
             G  ++ +         LV E+   GS+ D++ N +       WI    I R+I RG+ 
Sbjct: 86  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRGLS 143

Query: 140 YLHDECETQIIHCDIKPQNILMDEN 164
           +LH     ++IH DIK QN+L+ EN
Sbjct: 144 HLHQH---KVIHRDIKGQNVLLTEN 165

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 89.7 bits (223), Expect = 1e-21
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 12/141 (8%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRL 89
             + +G+G  G V  G       VAV    K +  D   + F  E  V+ +  H NLV+L
Sbjct: 197 LLQTIGKGEFGDVMLG-DYRGNKVAV----KCIKNDATAQAFLAEASVMTQLRHSNLVQL 251

Query: 90  LGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECET 147
           LG  +E    + +V EYM+ GSL D L +  +           + D+   + YL      
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GN 308

Query: 148 QIIHCDIKPQNILMDENRCAK 168
             +H D+  +N+L+ E+  AK
Sbjct: 309 NFVHRDLAARNVLVSEDNVAK 329

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 88.1 bits (219), Expect = 1e-21
 Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 18/155 (11%)

Query: 18  FSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDERERE-FQT 73
                 +L+ I      ++GRG+ G V K  M +    Q++AV R+   ++ +E++    
Sbjct: 2   MEVKADDLEPI-----MELGRGAYGVVEK--MRHVPSGQIMAVKRIRATVNSQEQKRLLM 54

Query: 74  EIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT---G 129
           ++ +  RT      V   G         +  E M + SL         +   I       
Sbjct: 55  DLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGK 113

Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
           IA  I + + +LH +    +IH D+KP N+L++  
Sbjct: 114 IAVSIVKALEHLHSK--LSVIHRDVKPSNVLINAL 146

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 87.3 bits (217), Expect = 2e-21
 Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
             E++G G  G V+ G       VAV  L K        F  E  ++ +  H+ LVRL  
Sbjct: 17  LVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75

Query: 92  YSLEVSKK--ILVYEYMSNGSLADIL-FNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
               V+++   ++ EYM NGSL D L   +  +    +   +A  IA G+ ++ +     
Sbjct: 76  ---VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---N 129

Query: 149 IIHCDIKPQNILMDENRCAK 168
            IH D++  NIL+ +    K
Sbjct: 130 YIHRDLRAANILVSDTLSCK 149

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 89.0 bits (221), Expect = 2e-21
 Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 12/146 (8%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
            ++K+G G  G V+         VAV  + K        F  E  V+    H  LV+L  
Sbjct: 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA 250

Query: 92  YSLEVSKK--ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQ 148
               V+K+   ++ E+M+ GSL D L + E       +    +  IA G+ ++    +  
Sbjct: 251 V---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRN 304

Query: 149 IIHCDIKPQNILMDENRCAK--NFRL 172
            IH D++  NIL+  +   K  +F L
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGL 330

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 87.8 bits (218), Expect = 2e-21
 Identities = 27/136 (19%), Positives = 58/136 (42%), Gaps = 9/136 (6%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKV-LDERERE-FQTEIKVIG--RTHHRNLVRL 89
           +++G G S  V++     +Q+ A+  +     D +  + ++ EI  +   + H   ++RL
Sbjct: 34  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
             Y +      +V E   N  L   L   +    W  ++   +++   +  +H      I
Sbjct: 94  YDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKS-YWKNMLEAVHTIHQH---GI 148

Query: 150 IHCDIKPQNILMDENR 165
           +H D+KP N L+ +  
Sbjct: 149 VHSDLKPANFLIVDGM 164

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 89.2 bits (221), Expect = 2e-21
 Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 10/140 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
            + K+G+G  G V+ G       VA+  L K        F  E +V+ +  H  LV+L  
Sbjct: 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 329

Query: 92  YSLEVSKK--ILVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQ 148
               VS++   +V EYMS GSL D L     K     +   +A  IA G+ Y+       
Sbjct: 330 V---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 383

Query: 149 IIHCDIKPQNILMDENRCAK 168
            +H D++  NIL+ EN   K
Sbjct: 384 YVHRDLRAANILVGENLVCK 403

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 89.1 bits (221), Expect = 3e-21
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 6/162 (3%)

Query: 9   SNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDER 67
           +  +      ++   E+++     K K+G G  G VY+G      L VAV  L K     
Sbjct: 201 NKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTME 259

Query: 68  EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIE 126
             EF  E  V+    H NLV+LLG         ++ E+M+ G+L D L    +Q  + + 
Sbjct: 260 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 319

Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
              +A  I+  + YL    +   IH ++  +N L+ EN   K
Sbjct: 320 LLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVK 358

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 86.9 bits (216), Expect = 3e-21
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 9/143 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNL 86
               +G+G  G VY G  I    NR   A+  L ++ + ++   F  E  ++   +H N+
Sbjct: 25  SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84

Query: 87  VRLLGYSLEVSKKIL-VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + L+G  L        +  YM +G L   + + ++ P   +       +ARG+ YL    
Sbjct: 85  LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA--- 141

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
           E + +H D+  +N ++DE+   K
Sbjct: 142 EQKFVHRDLAARNCMLDESFTVK 164

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 87.8 bits (218), Expect = 3e-21
 Identities = 27/136 (19%), Positives = 58/136 (42%), Gaps = 9/136 (6%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKV-LDERERE-FQTEIKVIG--RTHHRNLVRL 89
           +++G G S  V++     +Q+ A+  +     D +  + ++ EI  +   + H   ++RL
Sbjct: 15  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
             Y +      +V E   N  L   L   +    W  ++   +++   +  +H      I
Sbjct: 75  YDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKS-YWKNMLEAVHTIHQH---GI 129

Query: 150 IHCDIKPQNILMDENR 165
           +H D+KP N L+ +  
Sbjct: 130 VHSDLKPANFLIVDGM 145

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 88.3 bits (219), Expect = 4e-21
 Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 10/140 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
            + K+G+G  G V+ G       VA+  L K        F  E +V+ +  H  LV+L  
Sbjct: 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 246

Query: 92  YSLEVSKK--ILVYEYMSNGSLADIL-FNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
               VS++   +V EYMS GSL D L     K     +   +A  IA G+ Y+       
Sbjct: 247 V---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 300

Query: 149 IIHCDIKPQNILMDENRCAK 168
            +H D++  NIL+ EN   K
Sbjct: 301 YVHRDLRAANILVGENLVCK 320

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 86.5 bits (215), Expect = 4e-21
 Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 9/142 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQL----VAVNRL-EKVLDEREREFQTEIKVIGRTHHRNL 86
               +G G  G VY+G   N +     VAV    +    + + +F +E  ++    H ++
Sbjct: 16  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75

Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           V+L+G   E    I + E    G L   L   +     +     +  I + + YL     
Sbjct: 76  VKLIGIIEEEPTWI-IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---S 131

Query: 147 TQIIHCDIKPQNILMDENRCAK 168
              +H DI  +NIL+    C K
Sbjct: 132 INCVHRDIAVRNILVASPECVK 153

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 86.4 bits (214), Expect = 1e-20
 Identities = 27/136 (19%), Positives = 58/136 (42%), Gaps = 9/136 (6%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKV-LDERERE-FQTEIKVIG--RTHHRNLVRL 89
           +++G G S  V++     +Q+ A+  +     D +  + ++ EI  +   + H   ++RL
Sbjct: 62  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
             Y +      +V E   N  L   L   +    W  ++   +++   +  +H      I
Sbjct: 122 YDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKS-YWKNMLEAVHTIHQH---GI 176

Query: 150 IHCDIKPQNILMDENR 165
           +H D+KP N L+ +  
Sbjct: 177 VHSDLKPANFLIVDGM 192

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 86.8 bits (215), Expect = 1e-20
 Identities = 32/149 (21%), Positives = 63/149 (42%), Gaps = 8/149 (5%)

Query: 27  KITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRN 85
           KI+   K+ +G G+ GT+    M + + VAV R+     E       E++++     H N
Sbjct: 23  KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILP---ECFSFADREVQLLRESDEHPN 79

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           ++R      +   + +  E  +  +L + +   +     +E   + +    G+ +LH   
Sbjct: 80  VIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH--- 135

Query: 146 ETQIIHCDIKPQNILMDENRCAKNFRLWI 174
              I+H D+KP NIL+         +  I
Sbjct: 136 SLNIVHRDLKPHNILISMPNAHGKIKAMI 164

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 85.9 bits (213), Expect = 1e-20
 Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 8/135 (5%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVA---VNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL 89
            ++G GS G VY    + N ++VA   ++   K  +E+ ++   E++ + +  H N ++ 
Sbjct: 60  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
            G  L      LV EY   GS +D+L   +K    +E   +     +G+ YLH      +
Sbjct: 120 RGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NM 175

Query: 150 IHCDIKPQNILMDEN 164
           IH D+K  NIL+ E 
Sbjct: 176 IHRDVKAGNILLSEP 190

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 85.0 bits (211), Expect = 1e-20
 Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 12/141 (8%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRL 89
             + +G+G  G V  G     + VAV    K +  D   + F  E  V+ +  H NLV+L
Sbjct: 25  LLQTIGKGEFGDVMLGDYRGNK-VAV----KCIKNDATAQAFLAEASVMTQLRHSNLVQL 79

Query: 90  LGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECET 147
           LG  +E    + +V EYM+ GSL D L +  +           + D+   + YL      
Sbjct: 80  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--- 136

Query: 148 QIIHCDIKPQNILMDENRCAK 168
             +H D+  +N+L+ E+  AK
Sbjct: 137 NFVHRDLAARNVLVSEDNVAK 157

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 85.7 bits (212), Expect = 2e-20
 Identities = 33/158 (20%), Positives = 68/158 (43%), Gaps = 20/158 (12%)

Query: 18  FSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDEREREF-QT 73
                 + +KI      ++G G+ G V+K  + ++    ++A   +   +    R     
Sbjct: 28  GELKDDDFEKI-----SELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIR 80

Query: 74  EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT---GI 130
           E++V+   +   +V   G      +  +  E+M  GSL  +L    K+   I       +
Sbjct: 81  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKV 136

Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           +  + +G+ YL ++   +I+H D+KP NIL++     K
Sbjct: 137 SIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIK 172

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 85.0 bits (211), Expect = 3e-20
 Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 19/153 (12%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHR 84
              ++G+GS G VY+G             VA+  + +    RER EF  E  V+   +  
Sbjct: 29  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------FNAEKQPNWIERTGIARDIA 135
           ++VRLLG   +    +++ E M+ G L   L               P+  +   +A +IA
Sbjct: 89  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148

Query: 136 RGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            G+ YL+     + +H D+  +N ++ E+   K
Sbjct: 149 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVK 178

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 85.1 bits (211), Expect = 3e-20
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 21/161 (13%)

Query: 18  FSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDERERE-FQT 73
           + F+  +LK +      ++GRG+ G+V K  M+++   Q++AV R+   +DE+E++    
Sbjct: 17  WDFTAEDLKDL-----GEIGRGAYGSVNK--MVHKPSGQIMAVKRIRSTVDEKEQKQLLM 69

Query: 74  EIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL-FNAEKQPNWIERTGIA 131
           ++ V+ R+     +V+  G         +  E M + S      +      + I    + 
Sbjct: 70  DLDVVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILG 128

Query: 132 RDIARGIL----YLHDECETQIIHCDIKPQNILMDENRCAK 168
           + I    +    +L +    +IIH DIKP NIL+D +   K
Sbjct: 129 K-ITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIK 166

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 84.2 bits (209), Expect = 3e-20
 Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 13/144 (9%)

Query: 32  FKEKVGRGSSGTVYKGAMIN----RQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNL 86
               +G G  G V++G  ++       VA+        D    +F  E   + +  H ++
Sbjct: 19  LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78

Query: 87  VRLLGYSLEVSKK--ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
           V+L+G    +++    ++ E  + G L   L   +   +       A  ++  + YL   
Sbjct: 79  VKLIGV---ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 133

Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
              + +H DI  +N+L+  N C K
Sbjct: 134 -SKRFVHRDIAARNVLVSSNDCVK 156

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 84.2 bits (209), Expect = 3e-20
 Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 8/140 (5%)

Query: 33  KEKVGRGSSGTVYKG---AMINRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVR 88
             ++G G+ G+V +G       +  VA+  L +        E   E +++ +  +  +VR
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           L+G     +  + V E    G L   L    ++        +   ++ G+ YL    E  
Sbjct: 75  LIGVCQAEALML-VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL---EEKN 130

Query: 149 IIHCDIKPQNILMDENRCAK 168
            +H D+  +N+L+     AK
Sbjct: 131 FVHRDLAARNVLLVNRHYAK 150

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 84.7 bits (210), Expect = 3e-20
 Identities = 33/142 (23%), Positives = 70/142 (49%), Gaps = 10/142 (7%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVN--RLEKVLDEREREF-QTEIKVIGRTHHRNLVRL 89
           +K+GRG    VY+   +++   VA+   ++  ++D + R     EI ++ + +H N+++ 
Sbjct: 38  KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY 97

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERT--GIARDIARGILYLHDECE 146
               +E ++  +V E    G L+ ++ + +KQ   I ERT       +   + ++H    
Sbjct: 98  YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-- 155

Query: 147 TQIIHCDIKPQNILMDENRCAK 168
            +++H DIKP N+ +      K
Sbjct: 156 -RVMHRDIKPANVFITATGVVK 176

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 83.5 bits (207), Expect = 6e-20
 Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 11/154 (7%)

Query: 32  FKEKVGRGSSGTVYKG--------AMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           F E +G+G+   ++KG          ++   V +  L+K        F     ++ +  H
Sbjct: 12  FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
           ++LV   G  +   + ILV E++  GSL   L   +   N + +  +A+ +A  + +L +
Sbjct: 72  KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE 131

Query: 144 ECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV 177
                +IH ++  +NIL+      K       K+
Sbjct: 132 N---TLIHGNVCAKNILLIREEDRKTGNPPFIKL 162

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 83.9 bits (208), Expect = 6e-20
 Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 10/143 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMI-----NRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRN 85
             + +G G  GTV+KG  I      +  V +  + +K   +  +     +  IG   H +
Sbjct: 17  KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 76

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           +VRLLG     S   LV +Y+  GSL D +                  IA+G+ YL    
Sbjct: 77  IVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE--- 132

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
           E  ++H ++  +N+L+      +
Sbjct: 133 EHGMVHRNLAARNVLLKSPSQVQ 155

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 84.2 bits (209), Expect = 6e-20
 Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 10/143 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMI-----NRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRN 85
             + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V+    + +
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 78

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + RLLG  L  + ++ + + M  G L D +   +              IA+G+ YL    
Sbjct: 79  VCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE--- 134

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
           + +++H D+  +N+L+   +  K
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVK 157

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 83.1 bits (206), Expect = 1e-19
 Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 23/157 (14%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
            K ++G G+ G V+     N      + LVAV  L++  +   ++FQ E +++    H++
Sbjct: 45  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADIL--------------FNAEKQPNWIERTGIA 131
           +VR  G   E    ++V+EYM +G L   L                A       +   +A
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164

Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
             +A G++YL        +H D+  +N L+ +    K
Sbjct: 165 SQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVK 198

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 83.3 bits (206), Expect = 1e-19
 Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 9/139 (6%)

Query: 32  FKEKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRL 89
             + +G+G++  V++G       L A+     +   R  +    E +V+ + +H+N+V+L
Sbjct: 13  LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72

Query: 90  LGY--SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGILYLHDEC 145
                      K+L+ E+   GSL  +L          E     + RD+  G+ +L +  
Sbjct: 73  FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN- 131

Query: 146 ETQIIHCDIKPQNILMDEN 164
              I+H +IKP NI+    
Sbjct: 132 --GIVHRNIKPGNIMRVIG 148

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 82.7 bits (205), Expect = 1e-19
 Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 24/158 (15%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
            K ++G G+ G V+     N      + LVAV  L+       ++FQ E +++    H +
Sbjct: 19  LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIERTGI 130
           +V+  G   +    I+V+EYM +G L   L                 A+ +    +   I
Sbjct: 79  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138

Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           A  IA G++YL        +H D+  +N L+  N   K
Sbjct: 139 ASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVK 173

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 82.3 bits (204), Expect = 2e-19
 Identities = 43/148 (29%), Positives = 59/148 (39%), Gaps = 19/148 (12%)

Query: 32  FKEKVGRGSSGTVYKG----AMINRQLVAVNRLEKVL-------DEREREFQTEIKVIGR 80
             EK+G GS G V +G           VAV    K L        E   +F  E+  +  
Sbjct: 22  LLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----KCLKPDVLSQPEAMDDFIREVNAMHS 77

Query: 81  THHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILY 140
             HRNL+RL G  L    K+ V E    GSL D L   +        +  A  +A G+ Y
Sbjct: 78  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136

Query: 141 LHDECETQIIHCDIKPQNILMDENRCAK 168
           L      + IH D+  +N+L+      K
Sbjct: 137 LE---SKRFIHRDLAARNLLLATRDLVK 161

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 82.3 bits (204), Expect = 2e-19
 Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 6/139 (4%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
            K K+G G  G VY+G      L VAV  L K       EF  E  V+    H NLV+LL
Sbjct: 17  MKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQI 149
           G         ++ E+M+ G+L D L    +Q  + +    +A  I+  + YL  +     
Sbjct: 76  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 132

Query: 150 IHCDIKPQNILMDENRCAK 168
           IH D+  +N L+ EN   K
Sbjct: 133 IHRDLAARNCLVGENHLVK 151

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 82.4 bits (204), Expect = 2e-19
 Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 13/145 (8%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRN 85
               +G G  G V             ++VAV  L      +    ++ EI ++   +H +
Sbjct: 35  KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEH 94

Query: 86  LVRLLGYSLEVSKK--ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
           +++  G   +       LV EY+  GSL D L          +    A+ I  G+ YLH 
Sbjct: 95  IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH- 151

Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
                 IH D+  +N+L+D +R  K
Sbjct: 152 --AQHYIHRDLAARNVLLDNDRLVK 174

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 83.8 bits (207), Expect = 2e-19
 Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 9/173 (5%)

Query: 1   MPVKYKIDSNYSTLTTPFSFSYAELKKITDGFKEKV-GRGSSGTVYKGAMINRQ---LVA 56
           MP+   +  +  +           LK+      +   G G+ G+V +G    R+    VA
Sbjct: 308 MPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVA 367

Query: 57  VNRL-EKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL 115
           +  L +        E   E +++ +  +  +VRL+G     +  + V E    G L   L
Sbjct: 368 IKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALML-VMEMAGGGPLHKFL 426

Query: 116 FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
               ++        +   ++ G+ YL    E   +H ++  +N+L+     AK
Sbjct: 427 VGKREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRNLAARNVLLVNRHYAK 476

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 82.4 bits (204), Expect = 3e-19
 Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 10/143 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMI-----NRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRN 85
             + +G G+ GTVYKG  I      +  VA+  L E    +  +E   E  V+    + +
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 78

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + RLLG  L  S   L+ + M  G L D +   +              IA+G+ YL    
Sbjct: 79  VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE--- 134

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
           + +++H D+  +N+L+   +  K
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVK 157

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 82.0 bits (203), Expect = 3e-19
 Identities = 35/144 (24%), Positives = 51/144 (35%), Gaps = 18/144 (12%)

Query: 34  EKVGRGSSGTVYKGAMINR---QLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLV 87
            ++G GS G V+K    ++   +L AV R         +R R+            H   V
Sbjct: 63  SRLGHGSYGEVFKV--RSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCV 120

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERT--GIARDIARGILYLHDE 144
           RL     E     L  E     SL       E     + E    G  RD    + +LH +
Sbjct: 121 RLEQAWEEGGILYLQTEL-CGPSLQQHC---EAWGASLPEAQVWGYLRDTLLALAHLHSQ 176

Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
               ++H D+KP NI +      K
Sbjct: 177 ---GLVHLDVKPANIFLGPRGRCK 197

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 83.2 bits (205), Expect = 4e-19
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 13/143 (9%)

Query: 32  FKEKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRL 89
            KE++G G  G V +       + VA+ +  + L  + RE +  EI+++ + +H N+V  
Sbjct: 18  MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77

Query: 90  L------GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT--GIARDIARGILYL 141
                           +L  EY   G L   L   E      E     +  DI+  + YL
Sbjct: 78  REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137

Query: 142 HDECETQIIHCDIKPQNILMDEN 164
           H+    +IIH D+KP+NI++   
Sbjct: 138 HEN---RIIHRDLKPENIVLQPG 157

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 81.5 bits (202), Expect = 4e-19
 Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 25/159 (15%)

Query: 32  FKEKVGRGSSGTVYKGAMINR------QLVAVNRLEKVLDERER-EFQTEIKVIGRTHHR 84
           F E++G    G VYKG +         Q VA+  L+   +   R EF+ E  +  R  H 
Sbjct: 13  FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIERTG 129
           N+V LLG   +     +++ Y S+G L + L                  +      +   
Sbjct: 73  NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132

Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           +   IA G+ YL       ++H D+  +N+L+ +    K
Sbjct: 133 LVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVK 168

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 81.6 bits (202), Expect = 4e-19
 Identities = 31/153 (20%), Positives = 68/153 (44%), Gaps = 17/153 (11%)

Query: 18  FSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDERERE-FQT 73
           +     +L+ +      ++G G+ G V+K  M  R    ++AV ++ +  ++ E +    
Sbjct: 20  YQAEINDLENL-----GEMGSGTCGQVWK--MRFRKTGHVIAVKQMRRSGNKEENKRILM 72

Query: 74  EIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIA 131
           ++ V+ ++H    +V+  G  +  +   +  E M   +           P   + +  + 
Sbjct: 73  DLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGK--MT 130

Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
             I + + YL ++    +IH D+KP NIL+DE 
Sbjct: 131 VAIVKALYYLKEK--HGVIHRDVKPSNILLDER 161

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 82.2 bits (203), Expect = 6e-19
 Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 9/139 (6%)

Query: 32  FKEKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRL 89
             + +G+G++  V++G       L A+     +   R  +    E +V+ + +H+N+V+L
Sbjct: 13  LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72

Query: 90  LGY--SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGILYLHDEC 145
                      K+L+ E+   GSL  +L          E     + RD+  G+ +L +  
Sbjct: 73  FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN- 131

Query: 146 ETQIIHCDIKPQNILMDEN 164
              I+H +IKP NI+    
Sbjct: 132 --GIVHRNIKPGNIMRVIG 148

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 82.2 bits (203), Expect = 8e-19
 Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 14/169 (8%)

Query: 7   IDSNYSTLTTPFSFSYAEL--KKITDGFKEKVGRGSSGTVYKGAMINR----QLVAVNRL 60
           I     T T P +  Y E+  ++I       +G G  G V++G  ++       VA+   
Sbjct: 370 IIDEEDTYTMPSTRDY-EIQRERIE--LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC 426

Query: 61  -EKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAE 119
                D    +F  E   + +  H ++V+L+G   E +   ++ E  + G L   L   +
Sbjct: 427 KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK 485

Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
              +       A  ++  + YL      + +H DI  +N+L+  N C K
Sbjct: 486 FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVK 531

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 80.8 bits (200), Expect = 8e-19
 Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 19/153 (12%)

Query: 32  FKEKVGRGSSGTVYKGAMINR----QLVAVNRL-EKVLDERER-EFQTEIKVIGRTHHRN 85
             + +G G  G+V +G +         VAV  +      +RE  EF +E   +    H N
Sbjct: 38  LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97

Query: 86  LVRLLGYSLE-----VSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIA 135
           ++RLLG  +E     + K +++  +M  G L   L         K            DIA
Sbjct: 98  VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157

Query: 136 RGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            G+ YL        +H D+  +N ++ ++    
Sbjct: 158 LGMEYL---SNRNFLHRDLAARNCMLRDDMTVC 187

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 80.4 bits (199), Expect = 1e-18
 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 19/153 (12%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHR 84
               +G G+ G VY+G +           VAV  L +V  E++  +F  E  +I + +H+
Sbjct: 34  LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIARDIARGI 138
           N+VR +G SL+   + ++ E M+ G L   L       +       ++   +ARDIA G 
Sbjct: 94  NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153

Query: 139 LYLHDECETQIIHCDIKPQNILMD---ENRCAK 168
            YL    E   IH DI  +N L+      R AK
Sbjct: 154 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 183

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 80.1 bits (198), Expect = 1e-18
 Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 11/145 (7%)

Query: 32  FKEKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           F +K+G G    V     + +    A+ R+     +   E Q E  +    +H N++RL+
Sbjct: 33  FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92

Query: 91  GYSLEVSKK----ILVYEYMSNGSLADILFNAEKQPNWI-ERT--GIARDIARGILYLHD 143
            Y L          L+  +   G+L + +   + + N++ E     +   I RG+  +H 
Sbjct: 93  AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152

Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
                  H D+KP NIL+ +     
Sbjct: 153 ---KGYAHRDLKPTNILLGDEGQPV 174

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 80.0 bits (198), Expect = 2e-18
 Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 23/157 (14%)

Query: 32  FKEKVGRGSSGTVYKGAMIN---RQLVAVNRLEKVLDERER-EFQTEIKVIGR-THHRNL 86
           F++ +G G+ G V K  +     R   A+ R+++   + +  +F  E++V+ +  HH N+
Sbjct: 29  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88

Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIERTGIA 131
           + LLG         L  EY  +G+L D L                +     +  +    A
Sbjct: 89  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148

Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            D+ARG+ YL    + Q IH D+  +NIL+ EN  AK
Sbjct: 149 ADVARGMDYL---SQKQFIHRDLAARNILVGENYVAK 182

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 79.7 bits (197), Expect = 2e-18
 Identities = 31/154 (20%), Positives = 56/154 (36%), Gaps = 20/154 (12%)

Query: 32  FKEKVGRGSSGTVYKGAMINR----QLVAVNRL-EKVLDERERE-FQTEIKVIGRTHHRN 85
               +G+G  G+V +  +         VAV  L   ++   + E F  E   +    H +
Sbjct: 27  LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPH 86

Query: 86  LVRLLGYSLE------VSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDI 134
           + +L+G SL       +   +++  +M +G L   L                      DI
Sbjct: 87  VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI 146

Query: 135 ARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           A G+ YL        IH D+  +N ++ E+    
Sbjct: 147 ACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 79.7 bits (197), Expect = 3e-18
 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 19/153 (12%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHR 84
               +G G+ G VY+G +           VAV  L +V  E++  +F  E  +I + +H+
Sbjct: 75  LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 134

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIARDIARGI 138
           N+VR +G SL+   + ++ E M+ G L   L       +       ++   +ARDIA G 
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194

Query: 139 LYLHDECETQIIHCDIKPQNILMD---ENRCAK 168
            YL    E   IH DI  +N L+      R AK
Sbjct: 195 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 224

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 79.4 bits (196), Expect = 4e-18
 Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 9/140 (6%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKV-LDEREREF-QTEIKVIGRTHHRNLVRLL 90
           +K+G GS G      +  + +   +  +    +  +ERE  + E+ V+    H N+V+  
Sbjct: 30  QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT--GIARDIARGILYLHDECETQ 148
               E     +V +Y   G L   + NA+K   + E         I   + ++HD    +
Sbjct: 90  ESFEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQEDQILDWFVQICLALKHVHDR---K 145

Query: 149 IIHCDIKPQNILMDENRCAK 168
           I+H DIK QNI + ++   +
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQ 165

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 79.4 bits (196), Expect = 5e-18
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 18/141 (12%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLL 90
            ++ +G GSSGTV        + VAV R+     +       EIK++  +  H N++R  
Sbjct: 19  SEKILGYGSSGTVVFQGSFQGRPVAVKRMLI---DFCDIALMEIKLLTESDDHPNVIRY- 74

Query: 91  GYSLEVSKK--ILVYEYMSNGSLADIL----FNAEKQPNWIERT--GIARDIARGILYLH 142
            Y  E + +   +  E   N +L D++     + E      E     + R IA G+ +LH
Sbjct: 75  -YCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132

Query: 143 DECETQIIHCDIKPQNILMDE 163
                +IIH D+KPQNIL+  
Sbjct: 133 ---SLKIIHRDLKPQNILVST 150

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 78.6 bits (194), Expect = 7e-18
 Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 12/147 (8%)

Query: 33  KEKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRLL 90
           +  +  G    VY+   + + +  A+ RL    +E+ R    E+  + + + H N+V+  
Sbjct: 33  RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92

Query: 91  GYSLEVSKK-------ILVYEYMSNGSLADILFNAEKQPNWIERT--GIARDIARGILYL 141
             +    ++        L+   +  G L + L   E +      T   I     R + ++
Sbjct: 93  SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152

Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
           H   +  IIH D+K +N+L+      K
Sbjct: 153 HR-QKPPIIHRDLKVENLLLSNQGTIK 178

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 78.5 bits (193), Expect = 8e-18
 Identities = 28/157 (17%), Positives = 54/157 (34%), Gaps = 17/157 (10%)

Query: 32  FKEKVGRGSSGTVYKG------AMINRQLVAVNRLEK-VLDEREREFQTEIKVIGRTHHR 84
               +G G+   VY+          N+Q   +   +     E     Q  ++ +  +   
Sbjct: 69  VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQ-LMERLKPSMQH 127

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNW-----IERTGIARDIARGIL 139
             ++     L  +  +LV E  S G+L + + N  K               A  +   I 
Sbjct: 128 MFMKFYSAHLFQNGSVLVGELYSYGTLLNAI-NLYKNTPEKVMPQGLVISFAMRMLYMIE 186

Query: 140 YLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK 176
            +H   + +IIH DIKP N ++      ++    +  
Sbjct: 187 QVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSA 220

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 77.8 bits (192), Expect = 1e-17
 Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 18/151 (11%)

Query: 32  FKEKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
               +G+G+ G V K    ++ +  A+ ++    ++      +E+ ++   +H+ +VR  
Sbjct: 10  EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVMLLASLNHQYVVRYY 68

Query: 91  G------------YSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARG 137
                         +++    + +  EY  NG+L D++ +        E   + R I   
Sbjct: 69  AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEA 128

Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + Y+H +    IIH D+KP NI +DE+R  K
Sbjct: 129 LSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 76.2 bits (188), Expect = 4e-17
 Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 33/167 (19%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHR 84
           +   +G G+ G V++             +VAV  L++      + +FQ E  ++    + 
Sbjct: 51  YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADIL-----------------------FNAEKQ 121
           N+V+LLG         L++EYM+ G L + L                             
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170

Query: 122 PNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            +  E+  IAR +A G+ YL    E + +H D+  +N L+ EN   K
Sbjct: 171 LSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVK 214

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 75.7 bits (187), Expect = 6e-17
 Identities = 39/164 (23%), Positives = 63/164 (38%), Gaps = 32/164 (19%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERER-EFQTEIKV---IGRT 81
           F + +G G+ G V +              VAV  L+      ER    +E+KV   +G  
Sbjct: 27  FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 85

Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL-------FNAEKQPNWIERTG----- 129
            H N+V LLG        +++ EY   G L + L         ++  P  +E        
Sbjct: 86  -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144

Query: 130 -----IARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
                 +  +A+G+ +L        IH D+  +NIL+   R  K
Sbjct: 145 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITK 185

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 75.0 bits (185), Expect = 8e-17
 Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 10/145 (6%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKV-LDEREREF-QTEIKVIGRTHHRNLVRLL 90
             +G GS G   K     + +++    L+   + E E++   +E+ ++    H N+VR  
Sbjct: 12  YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71

Query: 91  GYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPNWI-ERT--GIARDIARGILYLHDEC 145
              ++ +   L  V EY   G LA ++    K+  ++ E     +   +   +   H   
Sbjct: 72  DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131

Query: 146 ET--QIIHCDIKPQNILMDENRCAK 168
           +    ++H D+KP N+ +D  +  K
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVK 156

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 74.7 bits (184), Expect = 1e-16
 Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 19/151 (12%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLLG 91
           + +GRG  G V++    ++    A+ R+     E  RE    E+K + +  H  +VR   
Sbjct: 11  QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70

Query: 92  YSLE---------VSKKILVY---EYMSNGSLADILFNAEKQPNWIERT--GIARDIARG 137
             LE          S K+ +Y   +     +L D +                I   IA  
Sbjct: 71  AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130

Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           + +LH +    ++H D+KP NI    +   K
Sbjct: 131 VEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 74.4 bits (183), Expect = 1e-16
 Identities = 20/155 (12%), Positives = 49/155 (31%), Gaps = 12/155 (7%)

Query: 34  EKVGRGSSGTVYKG--AMINRQLVAVN--RLEKVLDERERE-FQTEIKVIGRTHHRNLVR 88
              G       ++     ++RQ VA+     + VL +   +   +    + R     + R
Sbjct: 37  IFHGGVPPLQFWQALDTALDRQ-VALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR 95

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           +L      +  ++V E++  GSL ++    +  P+ +      + +A      H      
Sbjct: 96  VLDVVHTRAGGLVVAEWIRGGSLQEVA---DTSPSPVGAIRAMQSLAAAADAAH---RAG 149

Query: 149 IIHCDIKPQNILMDENRCAKNFRLWIGKVDEARSD 183
           +      P  + +  +                + D
Sbjct: 150 VALSIDHPSRVRVSIDGDVVLAYPATMPDANPQDD 184

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 74.2 bits (183), Expect = 2e-16
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 20/144 (13%)

Query: 35  KVGRGSSGTVYKGAMINRQL---VAVNRLEKVL------DEREREFQTEIKVIGRTHHRN 85
           ++G G+ GTV KG    +++   VAV    K+L         + E   E  V+ +  +  
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAV----KILKNEANDPALKDELLAEANVMQQLDNPY 79

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           +VR++G        +LV E    G L   L    +         +   ++ G+ YL    
Sbjct: 80  IVRMIGICEA-ESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYL---- 133

Query: 146 ETQ-IIHCDIKPQNILMDENRCAK 168
           E    +H D+  +N+L+     AK
Sbjct: 134 EESNFVHRDLAARNVLLVTQHYAK 157

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 74.5 bits (183), Expect = 3e-16
 Identities = 28/145 (19%), Positives = 56/145 (38%), Gaps = 24/145 (16%)

Query: 34  EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVL----DERERE-FQTEIKVIGRTHHRNL 86
             +  G  G +Y      +N + V +    K L    D   +     E + +    H ++
Sbjct: 86  GCIAHGGLGWIYLALDRNVNGRPVVL----KGLVHSGDAEAQAMAMAERQFLAEVVHPSI 141

Query: 87  VRLLGYSLEVSKKI-----LVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILY 140
           V++  +     +       +V EY+   SL       +K P  +        +I   + Y
Sbjct: 142 VQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK--GQKLP--VAEAIAYLLEILPALSY 197

Query: 141 LHDECETQIIHCDIKPQNILMDENR 165
           LH      +++ D+KP+NI++ E +
Sbjct: 198 LH---SIGLVYNDLKPENIMLTEEQ 219

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 73.5 bits (181), Expect = 5e-16
 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 28/162 (17%)

Query: 32  FKEKVGRGSSGTVYKG--------AMINRQLVAVNRLEKVLDERER-EFQTEIKVIGR-T 81
             + +G G+ G V                  VAV  L+    E++  +  +E++++    
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98

Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
            H+N++ LLG   +     ++ EY S G+L + L                  E+Q  + +
Sbjct: 99  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158

Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
                  +ARG+ YL      + IH D+  +N+L+ EN   K
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMK 197

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 73.1 bits (180), Expect = 5e-16
 Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 27/161 (16%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERER-EFQTEIKVIGR-THH 83
             + +GRG+ G V +            + VAV  L++     E     +E+K++    HH
Sbjct: 31  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90

Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTG------------- 129
            N+V LLG   +    + ++ E+   G+L+  L +   +    +                
Sbjct: 91  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150

Query: 130 --IARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
              +  +A+G+ +L      + IH D+  +NIL+ E    K
Sbjct: 151 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVK 188

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 73.2 bits (180), Expect = 6e-16
 Identities = 43/189 (22%), Positives = 75/189 (39%), Gaps = 32/189 (16%)

Query: 7   IDSNYSTLTTPFSFSYAELKKITD-GFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLD 65
           I SNYS L     +   + K I D      + +G    +      + +  A+ + EK L 
Sbjct: 9   ILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIIL-CEKDNKFYALKKYEKSLL 67

Query: 66  EREREF-----------------QTEIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMS 107
           E++R+F                 + E+++I    +   +   G  +    ++ ++YEYM 
Sbjct: 68  EKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGI-ITNYDEVYIIYEYME 126

Query: 108 NGSLADIL--------FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
           N S+                  P  + +  I + +     Y+H+E    I H D+KP NI
Sbjct: 127 NDSILKFDEYFFVLDKNYTCFIPIQVIKC-IIKSVLNSFSYIHNE--KNICHRDVKPSNI 183

Query: 160 LMDENRCAK 168
           LMD+N   K
Sbjct: 184 LMDKNGRVK 192

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 73.1 bits (180), Expect = 7e-16
 Identities = 39/188 (20%), Positives = 67/188 (35%), Gaps = 31/188 (16%)

Query: 7   IDSNYSTLTTPFSFSYAEL-----KKITDGFKEKVGRGSSGTVYKGAMI------NRQLV 55
            + N  T   P    Y E        +   F + +G G+ G V +              V
Sbjct: 22  YEGNSYTFIDPTQLPYNEKWEFPRNNLQ--FGKTLGAGAFGKVVEATAFGLGKEDAVLKV 79

Query: 56  AVNRLEKVLDERER-EFQTEIKVIGR-THHRNLVRLLGYSLEVSKKILVYEYMSNGSLAD 113
           AV  L+      E+    +E+K++     H N+V LLG        +++ EY   G L +
Sbjct: 80  AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 139

Query: 114 IL-------------FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNIL 160
            L               A    +  +    +  +A+G+ +L        IH D+  +N+L
Sbjct: 140 FLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVL 196

Query: 161 MDENRCAK 168
           +     AK
Sbjct: 197 LTNGHVAK 204

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 72.3 bits (178), Expect = 8e-16
 Identities = 30/154 (19%), Positives = 62/154 (40%), Gaps = 27/154 (17%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           E +G G  G V+K    I+ +   +    K +     + + E+K + +  H N+V   G 
Sbjct: 17  ELIGSGGFGQVFKAKHRIDGKTYVI----KRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72

Query: 93  -------------SLEVSKKILVY---EYMSNGSLADILFNAEKQPNWIERT--GIARDI 134
                        +   SK   ++   E+   G+L   +     +    +     +   I
Sbjct: 73  WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK-LDKVLALELFEQI 131

Query: 135 ARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            +G+ Y+H +   ++I+ D+KP NI + + +  K
Sbjct: 132 TKGVDYIHSK---KLINRDLKPSNIFLVDTKQVK 162

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 72.8 bits (179), Expect = 9e-16
 Identities = 36/162 (22%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 32  FKEKVGRGSSGTVYKG--------AMINRQLVAVNRLEKVLDERER-EFQTEIKVIGR-T 81
             + +G G  G V                  VAV  L+    E++  +  +E++++    
Sbjct: 85  LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 144

Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
            H+N++ LLG   +     ++ EY S G+L + L                  E+Q  + +
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204

Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
                  +ARG+ YL      + IH D+  +N+L+ EN   K
Sbjct: 205 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMK 243

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 71.5 bits (176), Expect = 1e-15
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 18/141 (12%)

Query: 37  GRGSSGTVYKG-AMINRQLVAVNRLEKVLDER-------EREFQTEIKVIGRTHHRNLVR 88
           G+G  G VY      ++ ++A+    KVL +        E + + E+++     H N++R
Sbjct: 18  GKGKFGNVYLAREKQSKFILAL----KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73

Query: 89  LLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
           L GY    + ++ L+ EY   G++   L    K       T    ++A  + Y H     
Sbjct: 74  LYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-YITELANALSYCH---SK 128

Query: 148 QIIHCDIKPQNILMDENRCAK 168
           ++IH DIKP+N+L+      K
Sbjct: 129 RVIHRDIKPENLLLGSAGELK 149

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 71.9 bits (177), Expect = 2e-15
 Identities = 39/169 (23%), Positives = 62/169 (36%), Gaps = 37/169 (21%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERER-EFQTEIKV---IGRT 81
           F + +G G+ G V                VAV  L++  D  ER    +E+K+   +G  
Sbjct: 49  FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS- 107

Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL-----------FNAEKQPNWIERTG- 129
            H N+V LLG         L++EY   G L + L              E Q    E    
Sbjct: 108 -HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166

Query: 130 ----------IARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
                      A  +A+G+ +L        +H D+  +N+L+   +  K
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVK 212

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 71.6 bits (176), Expect = 2e-15
 Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 20/147 (13%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDERE---REFQTEIKVIGRTHHRNLVRL 89
              G+G+ GTV  G        VA   ++KV+ +     RE Q  ++ +   HH N+V+L
Sbjct: 29  RMAGQGTFGTVQLGKEKSTGMSVA---IKKVIQDPRFRNRELQ-IMQDLAVLHHPNIVQL 84

Query: 90  LGYSLEVSKK-------ILVYEYMSNGSLADILFNAEKQPNWIERTGI---ARDIARGIL 139
             Y   + ++        +V EY+ + +L     N  ++        I      + R I 
Sbjct: 85  QSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIG 143

Query: 140 YLHDECETQIIHCDIKPQNILMDENRC 166
            LH      + H DIKP N+L++E   
Sbjct: 144 CLHLPS-VNVCHRDIKPHNVLVNEADG 169

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 71.1 bits (175), Expect = 2e-15
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 20/145 (13%)

Query: 34  EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDE--------REREFQTEIKVIGRTHH 83
           +K+G G   TVY     ++N + VA+    K +           +R F+ E+    +  H
Sbjct: 17  DKLGGGGMSTVYLAEDTILNIK-VAI----KAIFIPPREKEETLKR-FEREVHNSSQLSH 70

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
           +N+V ++    E     LV EY+   +L++ +  +    +          I  GI + H 
Sbjct: 71  QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAH- 128

Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
             + +I+H DIKPQNIL+D N+  K
Sbjct: 129 --DMRIVHRDIKPQNILIDSNKTLK 151

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 71.1 bits (175), Expect = 2e-15
 Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 33/167 (19%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHR 84
             + +G G  G V K    +         VAV  L++     E  +  +E  V+ + +H 
Sbjct: 27  LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG--------------- 129
           ++++L G   +    +L+ EY   GSL   L  + K       +G               
Sbjct: 87  HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146

Query: 130 --------IARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
                    A  I++G+ YL    E +++H D+  +NIL+ E R  K
Sbjct: 147 LTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMK 190

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 71.6 bits (176), Expect = 3e-15
 Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 32/164 (19%)

Query: 32  FKEKVGRGSSGTVYKGAMIN--------RQLVAVNRLEKVLDERER-EFQTEIKV---IG 79
             + +G G+ G V     I            VAV  L+    E++  +  +E+++   IG
Sbjct: 73  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132

Query: 80  RTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNW 124
           +  H+N++ LLG   +     ++ EY S G+L + L                N E+Q + 
Sbjct: 133 K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190

Query: 125 IERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            +    A  +ARG+ YL      + IH D+  +N+L+ E+   K
Sbjct: 191 KDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMK 231

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 71.2 bits (175), Expect = 3e-15
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 10/137 (7%)

Query: 37  GRGSSGTVYKGA-MINRQLVAVNRLEK--VLDERERE-FQTEIKVIGRTHHRNLVRLLGY 92
           G+G     ++ +    +++ A   + K  +L   +RE    EI +     H+++V   G+
Sbjct: 50  GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 109

Query: 93  SLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
             E +  + +V E     SL ++    +       R    R I  G  YLH     ++IH
Sbjct: 110 -FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RVIH 164

Query: 152 CDIKPQNILMDENRCAK 168
            D+K  N+ ++E+   K
Sbjct: 165 RDLKLGNLFLNEDLEVK 181

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 70.3 bits (173), Expect = 5e-15
 Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 17/143 (11%)

Query: 34  EKVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDEREREF--QT---EIKVIGRTHHRN 85
            K+G GS G V+K    NR   Q+VA   ++K L+  +     +    EI+++ +  H N
Sbjct: 9   GKIGEGSYGVVFKC--RNRDTGQIVA---IKKFLESEDDPVIKKIALREIRMLKQLKHPN 63

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           LV LL       +  LV+EY  + ++   L   ++         I     + + + H   
Sbjct: 64  LVNLLEVFRRKRRLHLVFEYCDH-TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH- 121

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
               IH D+KP+NIL+ ++   K
Sbjct: 122 --NCIHRDVKPENILITKHSVIK 142

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 70.3 bits (173), Expect = 5e-15
 Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 31/146 (21%)

Query: 34  EKVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDERERE---FQT--EIKVIGRTHHRN 85
             VG GS G V K    N+   ++VA   ++K L+  + +        EIK++ +  H N
Sbjct: 31  GLVGEGSYGMVMKC--RNKDTGRIVA---IKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85

Query: 86  LVRLLGYSLEV---SKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGI---ARDIARGI 138
           LV LL    EV    K+  LV+E++ +     IL + E  PN ++   +      I  GI
Sbjct: 86  LVNLL----EVCKKKKRWYLVFEFVDH----TILDDLELFPNGLDYQVVQKYLFQIINGI 137

Query: 139 LYLHDECETQIIHCDIKPQNILMDEN 164
            + H      IIH DIKP+NIL+ ++
Sbjct: 138 GFCHSH---NIIHRDIKPENILVSQS 160

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 69.9 bits (172), Expect = 6e-15
 Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 17/141 (12%)

Query: 37  GRGSSGTVYKG-AMINRQLVAVNRLEKVLDER-------EREFQTEIKVIGRTHHRNLVR 88
           G+GS   VY+  ++     VA+    K++D++        +  Q E+K+  +  H +++ 
Sbjct: 20  GKGSFAGVYRAESIHTGLEVAI----KMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILE 75

Query: 89  LLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
           L  Y  E S  + LV E   NG +   L N  K  +  E       I  G+LYLH     
Sbjct: 76  LYNY-FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SH 131

Query: 148 QIIHCDIKPQNILMDENRCAK 168
            I+H D+   N+L+  N   K
Sbjct: 132 GILHRDLTLSNLLLTRNMNIK 152

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 69.9 bits (172), Expect = 6e-15
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 12/140 (8%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE---FQT--EIKVIGRTHHRNLVR 88
           EKVG G+ G VYK      ++VA   L+++  + E E        EI ++   HH N+V 
Sbjct: 27  EKVGEGTYGVVYKAKDSQGRIVA---LKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           L+          LV+E+M    L  +L   +      +       + RG+ + H     +
Sbjct: 84  LIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---R 139

Query: 149 IIHCDIKPQNILMDENRCAK 168
           I+H D+KPQN+L++ +   K
Sbjct: 140 ILHRDLKPQNLLINSDGALK 159

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 69.5 bits (171), Expect = 7e-15
 Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 18/141 (12%)

Query: 37  GRGSSGTVYKG-AMINRQLVAVNRLEKVLDER-------EREFQTEIKVIGRTHHRNLVR 88
           G+G  G VY      N+ ++A+    KVL +        E + + EI++     H N++R
Sbjct: 23  GKGKFGNVYLAREKQNKFIMAL----KVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 78

Query: 89  LLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
           +  Y     K+I L+ E+   G L   L    +       T    ++A  + Y H   E 
Sbjct: 79  MYNY-FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT-FMEELADALHYCH---ER 133

Query: 148 QIIHCDIKPQNILMDENRCAK 168
           ++IH DIKP+N+LM      K
Sbjct: 134 KVIHRDIKPENLLMGYKGELK 154

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 70.4 bits (173), Expect = 7e-15
 Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 17/140 (12%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
           + +G GS G V++  ++    VA   ++KVL ++  + + E++++    H N+V L  + 
Sbjct: 46  KVIGNGSFGVVFQAKLVESDEVA---IKKVLQDKRFKNR-ELQIMRIVKHPNVVDLKAFF 101

Query: 94  LEVSKKI------LVYEYMSNGSLADILFNAEKQPNWIERTGIAR---DIARGILYLHDE 144
                K       LV EY+   ++     +  K    +    I      + R + Y+H  
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160

Query: 145 CETQIIHCDIKPQNILMDEN 164
               I H DIKPQN+L+D  
Sbjct: 161 ---GICHRDIKPQNLLLDPP 177

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 70.5 bits (173), Expect = 8e-15
 Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 18/141 (12%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           + +G GS G VY+  +  + +LVA   ++KVL ++  + + E++++ +  H N+VRL  +
Sbjct: 60  KVIGNGSFGVVYQAKLCDSGELVA---IKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYF 115

Query: 93  SLEVSKKI------LVYEYMSNGSLADILFNAEKQPNWIERTGIAR---DIARGILYLHD 143
                +K       LV +Y+   ++  +  +  +    +    +      + R + Y+H 
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 173

Query: 144 ECETQIIHCDIKPQNILMDEN 164
                I H DIKPQN+L+D +
Sbjct: 174 --SFGICHRDIKPQNLLLDPD 192

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 69.1 bits (170), Expect = 1e-14
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 10/137 (7%)

Query: 37  GRGSSGTVYKGA-MINRQLVAVNRLEK--VLDERERE-FQTEIKVIGRTHHRNLVRLLGY 92
           G+G     ++ +    +++ A   + K  +L   +RE    EI +     H+++V   G+
Sbjct: 24  GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 83

Query: 93  SLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
             E +  + +V E     SL ++    +       R    R I  G  YLH     ++IH
Sbjct: 84  -FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RVIH 138

Query: 152 CDIKPQNILMDENRCAK 168
            D+K  N+ ++E+   K
Sbjct: 139 RDLKLGNLFLNEDLEVK 155

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 69.5 bits (170), Expect = 2e-14
 Identities = 29/132 (21%), Positives = 60/132 (45%), Gaps = 8/132 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
             E++G G+ G V++          A   +    +  +   + EI+ +    H  LV L 
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 220

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER--TGIARDIARGILYLHDECETQ 148
               + ++ +++YE+MS G L +    A++     E       R + +G+ ++H+     
Sbjct: 221 DAFEDDNEMVMIYEFMSGGELFE--KVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---N 275

Query: 149 IIHCDIKPQNIL 160
            +H D+KP+NI+
Sbjct: 276 YVHLDLKPENIM 287

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 68.7 bits (169), Expect = 2e-14
 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 13/141 (9%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERERE---FQT--EIKVIGRTHHRNLV 87
           EK+G G+ GTV+K       ++VA   L++V  + + E        EI ++    H+N+V
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVA---LKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
           RL        K  LV+E+     L     +     +          + +G+ + H     
Sbjct: 65  RLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR--- 120

Query: 148 QIIHCDIKPQNILMDENRCAK 168
            ++H D+KPQN+L++ N   K
Sbjct: 121 NVLHRDLKPQNLLINRNGELK 141

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 68.7 bits (169), Expect = 2e-14
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 12/140 (8%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE---FQT--EIKVIGRTHHRNLVR 88
           EK+G G+ G VYK      +  A   L+K+  E+E E     T  EI ++    H N+V+
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFA---LKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           L        + +LV+E++    L  +L   E     +        +  GI Y HD    +
Sbjct: 65  LYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---R 120

Query: 149 IIHCDIKPQNILMDENRCAK 168
           ++H D+KPQN+L++     K
Sbjct: 121 VLHRDLKPQNLLINREGELK 140

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 68.4 bits (168), Expect = 3e-14
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 26/150 (17%)

Query: 34  EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDE--------REREFQTEIKVIGRTHH 83
           E +G G    V+       +R  VAV    KVL            R F+ E +     +H
Sbjct: 18  EILGFGGMSEVHLARDLRDHRD-VAV----KVLRADLARDPSFYLR-FRREAQNAAALNH 71

Query: 84  RNLVRLLGYSLEVSKKI----LVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGI 138
             +V +       +       +V EY+   +L DI+    + P   +R   +  D  + +
Sbjct: 72  PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQAL 129

Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
            + H   +  IIH D+KP NI++      K
Sbjct: 130 NFSH---QNGIIHRDVKPANIMISATNAVK 156

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 68.0 bits (167), Expect = 3e-14
 Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 22/146 (15%)

Query: 34  EKVGRGSSGTVYKGA--MINRQLVAVNRLEKVLDE--------REREFQTEIKVIGRTHH 83
             VGRG  G VY+    +  R  VA+    K++ E        R R  Q E +  GR   
Sbjct: 40  RLVGRGGMGDVYEAEDTVRERI-VAL----KLMSETLSSDPVFRTR-MQREARTAGRLQE 93

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLH 142
            ++V +  +     +  +    ++   LA +L    + P    R   I R I   +   H
Sbjct: 94  PHVVPIHDFGEIDGQLYVDMRLINGVDLAAML--RRQGPLAPPRAVAIVRQIGSALDAAH 151

Query: 143 DECETQIIHCDIKPQNILMDENRCAK 168
                   H D+KP+NIL+  +  A 
Sbjct: 152 ---AAGATHRDVKPENILVSADDFAY 174

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 67.9 bits (167), Expect = 3e-14
 Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 16/143 (11%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERERE---FQT--EIKVIGRTHHRNLV 87
           EK+G G+ G VYK    +  ++VA   L+K+  + E E        EI ++   +H N+V
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVA---LKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65

Query: 88  RLLGYSLEVSKKILVYEYMSN--GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           +LL      +K  LV+E++        D           I+       + +G+ + H   
Sbjct: 66  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAFCHSH- 122

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             +++H D+KPQN+L++     K
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIK 143

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 68.0 bits (167), Expect = 4e-14
 Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 18/147 (12%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERERE---FQT--EIKVIGRTHHRNLV 87
            K+G G+ G VYK    +  + VA   ++++  E E E        E+ ++    HRN++
Sbjct: 40  TKLGEGTYGEVYKAIDTVTNETVA---IKRIRLEHEEEGVPGTAIREVSLLKELQHRNII 96

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT--GIARDIARGILYLHDEC 145
            L        +  L++EY  N  L   +   +K P+   R        +  G+ + H   
Sbjct: 97  ELKSVIHHNHRLHLIFEYAEN-DLKKYM---DKNPDVSMRVIKSFLYQLINGVNFCHSR- 151

Query: 146 ETQIIHCDIKPQNILMDENRCAKNFRL 172
             + +H D+KPQN+L+  +  ++   L
Sbjct: 152 --RCLHRDLKPQNLLLSVSDASETPVL 176

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 67.3 bits (165), Expect = 6e-14
 Identities = 29/137 (21%), Positives = 57/137 (41%), Gaps = 10/137 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV-LDEREREFQTEIKVIGRTHHRNLVRL 89
           FK K+G G+ G V+      +     +  + K        + + EI+V+    H N++++
Sbjct: 26  FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85

Query: 90  LGYSLEVSKKI-LVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGILYLHDEC 145
                E    + +V E    G L + I+    +     E     + + +   + Y H + 
Sbjct: 86  FEV-FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ- 143

Query: 146 ETQIIHCDIKPQNILMD 162
              ++H D+KP+NIL  
Sbjct: 144 --HVVHKDLKPENILFQ 158

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 67.3 bits (165), Expect = 7e-14
 Identities = 31/140 (22%), Positives = 51/140 (36%), Gaps = 12/140 (8%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-RQLVAV-----NRLEKVLDEREREFQTEIKVIGRTHHRN 85
             E +G+G    V +       Q  AV      +          + + E  +     H +
Sbjct: 28  LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGILYLH 142
           +V LL          +V+E+M    L   I+  A+    + E   +   R I   + Y H
Sbjct: 88  IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147

Query: 143 DECETQIIHCDIKPQNILMD 162
           D     IIH D+KP  +L+ 
Sbjct: 148 DN---NIIHRDVKPHCVLLA 164

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 67.3 bits (165), Expect = 8e-14
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 18/135 (13%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRL 89
            KE +G GS     +          AV    K++D+ +R+   EI+++ R   H N++ L
Sbjct: 26  VKEDIGVGSYSVCKRCIHKATNMEFAV----KIIDKSKRDPTEEIEILLRYGQHPNIITL 81

Query: 90  LGYSLEVSKKI-LVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGILYLHDEC 145
                +  K + +V E M  G L D IL    +Q  + ER  + +   I + + YLH + 
Sbjct: 82  KDV-YDDGKYVYVVTELMKGGELLDKIL----RQKFFSEREASAVLFTITKTVEYLHAQ- 135

Query: 146 ETQIIHCDIKPQNIL 160
              ++H D+KP NIL
Sbjct: 136 --GVVHRDLKPSNIL 148

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 66.8 bits (164), Expect = 9e-14
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 11/134 (8%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           F E +G G+   V+        +L A+  ++K    R+   + EI V+ +  H N+V L 
Sbjct: 13  FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72

Query: 91  GYSLEVSKKILVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGILYLHDECET 147
                 +   LV + +S G L D IL   E+   + E+  + + + +   + YLH+    
Sbjct: 73  DIYESTTHYYLVMQLVSGGELFDRIL---ERG-VYTEKDASLVIQQVLSAVKYLHEN--- 125

Query: 148 QIIHCDIKPQNILM 161
            I+H D+KP+N+L 
Sbjct: 126 GIVHRDLKPENLLY 139

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 66.4 bits (163), Expect = 1e-13
 Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 27/154 (17%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQT--------EIKV---IGRT 81
            ++G G+ GTVYK     +   VA   L+ V                  E+ +   +   
Sbjct: 15  AEIGVGAYGTVYKARDPHSGHFVA---LKSVRVPNGGGGGGGLPISTVREVALLRRLEAF 71

Query: 82  HHRNLVRLL----GYSLEVSKKI-LVYEYMSN--GSLADILFNAEKQPNWIERTGIARDI 134
            H N+VRL+        +   K+ LV+E++     +  D           I+   + R  
Sbjct: 72  EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD--LMRQF 129

Query: 135 ARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            RG+ +LH      I+H D+KP+NIL+      K
Sbjct: 130 LRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 66.5 bits (163), Expect = 1e-13
 Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 25/149 (16%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKV-LDERE-------REFQTEIKVIGRTHHR 84
           EK+G G+  TVYKG        VA   L++V LD  E       RE    I ++    H 
Sbjct: 11  EKLGNGTYATVYKGLNKTTGVYVA---LKEVKLDSEEGTPSTAIRE----ISLMKELKHE 63

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIA---RDIARGIL 139
           N+VRL       +K  LV+E+M N  L   +        P  +E   +      + +G+ 
Sbjct: 64  NIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122

Query: 140 YLHDECETQIIHCDIKPQNILMDENRCAK 168
           + H+    +I+H D+KPQN+L+++    K
Sbjct: 123 FCHEN---KILHRDLKPQNLLINKRGQLK 148

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 66.5 bits (163), Expect = 1e-13
 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 25/152 (16%)

Query: 34  EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDERERE---FQT--EIKV---IGRTHH 83
            ++G G+ G V+K        + VA   L++V  +   E     T  E+ V   +    H
Sbjct: 17  AEIGEGAYGKVFKARDLKNGGRFVA---LKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73

Query: 84  RNLVRLL----GYSLEVSKKI-LVYEYMSN--GSLADILFNAEKQPNWIERTGIARDIAR 136
            N+VRL         +   K+ LV+E++     +  D +         I+   +   + R
Sbjct: 74  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD--MMFQLLR 131

Query: 137 GILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           G+ +LH      ++H D+KPQNIL+  +   K
Sbjct: 132 GLDFLHSHR---VVHRDLKPQNILVTSSGQIK 160

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 66.1 bits (162), Expect = 1e-13
 Identities = 27/142 (19%), Positives = 62/142 (43%), Gaps = 13/142 (9%)

Query: 26  KKITDGF--KEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTH 82
           K++ + +   E +GRG  G V++     +++      ++    ++    + EI ++    
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQV-LVKKEISILNIAR 59

Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGIL 139
           HRN++ L      + + ++++E++S   + + I           ER        +   + 
Sbjct: 60  HRNILHLHESFESMEELVMIFEFISGLDIFERIN---TSAFELNEREIVSYVHQVCEALQ 116

Query: 140 YLHDECETQIIHCDIKPQNILM 161
           +LH      I H DI+P+NI+ 
Sbjct: 117 FLHSH---NIGHFDIRPENIIY 135

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 66.1 bits (162), Expect = 2e-13
 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 21/149 (14%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERERE-F-QT---EIKVIGRTHHRNLV 87
            K+G+G+ G V+K       Q VA   L+KVL E E+E F  T   EIK++    H N+V
Sbjct: 23  AKIGQGTFGEVFKARHRKTGQKVA---LKKVLMENEKEGFPITALREIKILQLLKHENVV 79

Query: 88  RLLG--------YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGIL 139
            L+         Y+       LV+++  +  LA +L N   +    E   + + +  G+ 
Sbjct: 80  NLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 138

Query: 140 YLHDECETQIIHCDIKPQNILMDENRCAK 168
           Y+H     +I+H D+K  N+L+  +   K
Sbjct: 139 YIHRN---KILHRDMKAANVLITRDGVLK 164

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 66.1 bits (162), Expect = 2e-13
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 12/140 (8%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKV-LDEREREFQT---EIKVIGRTHHRNLVR 88
           +K+G G+  TVYKG + +   LVA   L+++ L+  E    T   E+ ++    H N+V 
Sbjct: 8   DKLGEGTYATVYKGKSKLTDNLVA---LKEIRLEHEEGAPCTAIREVSLLKDLKHANIVT 64

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           L           LV+EY+    L   L +     N          + RG+ Y H +   +
Sbjct: 65  LHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---K 120

Query: 149 IIHCDIKPQNILMDENRCAK 168
           ++H D+KPQN+L++E    K
Sbjct: 121 VLHRDLKPQNLLINERGELK 140

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 66.3 bits (162), Expect = 2e-13
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 15/156 (9%)

Query: 15  TTPFSFSYAELKKITDG--FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEK--VLDERER 69
            TP  F  ++   +++     +K+G G+ G V            A+  + K  V      
Sbjct: 22  ATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNS 81

Query: 70  EFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLAD-ILFNAEKQPNWIERT 128
           +   E+ V+    H N+++L  +  +     LV E    G L D I+     +  + E  
Sbjct: 82  KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEII----HRMKFNEVD 137

Query: 129 --GIARDIARGILYLHDECETQIIHCDIKPQNILMD 162
              I + +  G+ YLH      I+H D+KP+N+L++
Sbjct: 138 AAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLE 170

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 65.7 bits (161), Expect = 2e-13
 Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 23/148 (15%)

Query: 32  FKEKVGRGSSGTVYKG---------AM--INRQLVAVNRLEKVLDEREREFQTEIKVIGR 80
            KE +GRG S  V +          A+  I+         E+V + RE     E+ ++ +
Sbjct: 21  PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA-TLKEVDILRK 79

Query: 81  -THHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIER--TGIARDIAR 136
            + H N+++L     E +    LV++ M  G L D L   EK     E+    I R +  
Sbjct: 80  VSGHPNIIQLKDT-YETNTFFFLVFDLMKKGELFDYL--TEKV-TLSEKETRKIMRALLE 135

Query: 137 GILYLHDECETQIIHCDIKPQNILMDEN 164
            I  LH      I+H D+KP+NIL+D++
Sbjct: 136 VICALHKL---NIVHRDLKPENILLDDD 160

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 65.9 bits (161), Expect = 2e-13
 Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 8/133 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
             E++G G+ G V++       ++     +       +   + EI ++ + HH  L+ L 
Sbjct: 55  ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLH 114

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER--TGIARDIARGILYLHDECETQ 148
               +  + +L+ E++S G L D +  A +     E       R    G+ ++H+     
Sbjct: 115 DAFEDKYEMVLILEFLSGGELFDRI--AAEDYKMSEAEVINYMRQACEGLKHMHEH---S 169

Query: 149 IIHCDIKPQNILM 161
           I+H DIKP+NI+ 
Sbjct: 170 IVHLDIKPENIMC 182

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 65.7 bits (161), Expect = 3e-13
 Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 16/144 (11%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQT--------EIKVIGRTHHR 84
           + +G G   TVYK       Q+VA   ++K+      E +         EIK++    H 
Sbjct: 16  DFLGEGQFATVYKARDKNTNQIVA---IKKIKLGHRSEAKDGINRTALREIKLLQELSHP 72

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
           N++ LL      S   LV+++M    L  I+ +                  +G+ YLH  
Sbjct: 73  NIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 131

Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
               I+H D+KP N+L+DEN   K
Sbjct: 132 ---WILHRDLKPNNLLLDENGVLK 152

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 65.1 bits (159), Expect = 6e-13
 Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 16/156 (10%)

Query: 16  TPFSFSYAELKKITDG--FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEK---VLDERER 69
           TP  F        +D    +  +G+GS G V         Q  AV  + K        + 
Sbjct: 12  TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 71

Query: 70  EFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLAD-ILFNAEKQPNWIERT 128
               E++++ +  H N+++L  +  +     LV E  + G L D I+     +  + E  
Sbjct: 72  SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVD 127

Query: 129 --GIARDIARGILYLHDECETQIIHCDIKPQNILMD 162
              I R +  GI Y+H     +I+H D+KP+N+L++
Sbjct: 128 AARIIRQVLSGITYMHKN---KIVHRDLKPENLLLE 160

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 64.3 bits (157), Expect = 8e-13
 Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 10/134 (7%)

Query: 31  GFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL 89
              E +G G  G V+K         +A   ++    + + E + EI V+ +  H NL++L
Sbjct: 92  SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151

Query: 90  LGYSLEVSKKILVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGILYLHDECE 146
                  +  +LV EY+  G L D I+   ++  N  E       + I  GI ++H    
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRII---DESYNLTELDTILFMKQICEGIRHMHQM-- 206

Query: 147 TQIIHCDIKPQNIL 160
             I+H D+KP+NIL
Sbjct: 207 -YILHLDLKPENIL 219

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 64.7 bits (158), Expect = 8e-13
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 13/139 (9%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEK--VLDEREREFQTEIKVIGRTHHRNLVR 88
               +G+GS G V K      +Q  AV  + K    ++       E++++ +  H N+++
Sbjct: 26  IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85

Query: 89  LLGYSLEVSKKILVYEYMSNGSLAD-ILFNAEKQPNWIERT--GIARDIARGILYLHDEC 145
           L     + S   +V E  + G L D I+    K+  + E     I + +  GI Y+H   
Sbjct: 86  LFEILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHKH- 140

Query: 146 ETQIIHCDIKPQNILMDEN 164
              I+H D+KP+NIL++  
Sbjct: 141 --NIVHRDLKPENILLESK 157

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 64.0 bits (156), Expect = 1e-12
 Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 22/147 (14%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEK--------VLDEREREFQTEIKVIGR-T 81
            K+ +GRG S  V +          AV  +E          L+E     + E  ++ +  
Sbjct: 98  PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA 157

Query: 82  HHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARG 137
            H +++ L+    E S  + LV++ M  G L D +     ++    E+    I R +   
Sbjct: 158 GHPHIITLIDS-YESSSFMFLVFDLMRKGELFDYLT----EKVALSEKETRSIMRSLLEA 212

Query: 138 ILYLHDECETQIIHCDIKPQNILMDEN 164
           + +LH      I+H D+KP+NIL+D+N
Sbjct: 213 VSFLHAN---NIVHRDLKPENILLDDN 236

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 63.3 bits (155), Expect = 1e-12
 Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 13/137 (9%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKV-LDERERE-FQTEIKVIGRTHHRNLVR 88
            KE++G+G+   V +          A   +    L  R+ +  + E ++  +  H N+VR
Sbjct: 10  VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVR 69

Query: 89  LLGYSLEVSKKILVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGILYLHDEC 145
           L     E S   LV++ ++ G L + I+    ++  + E   +   + I   I Y H   
Sbjct: 70  LHDSIQEESFHYLVFDLVTGGELFEDIV---ARE-FYSEADASHCIQQILESIAYCHSN- 124

Query: 146 ETQIIHCDIKPQNILMD 162
              I+H ++KP+N+L+ 
Sbjct: 125 --GIVHRNLKPENLLLA 139

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 63.4 bits (155), Expect = 2e-12
 Identities = 36/170 (21%), Positives = 65/170 (38%), Gaps = 15/170 (8%)

Query: 3   VKYKIDSNYSTLTTPFSFSYAELKKITDGF---KEKVGRGSSGTVYKGAMI-NRQLVAVN 58
           + +    +        +  +  ++   + +    +++GRG    V +       Q  A  
Sbjct: 1   MHHHHHHSSGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAK 60

Query: 59  RLEK--VLDEREREFQTEIKVIGR-THHRNLVRLLGYSLEVSKKILVYEYMSNGSLAD-I 114
            L+K     +   E   EI V+        ++ L       S+ IL+ EY + G +    
Sbjct: 61  FLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLC 120

Query: 115 LFNAEKQPNWIER--TGIARDIARGILYLHDECETQIIHCDIKPQNILMD 162
           L   E      E     + + I  G+ YLH   +  I+H D+KPQNIL+ 
Sbjct: 121 L--PELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLS 165

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 63.6 bits (155), Expect = 2e-12
 Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 22/146 (15%)

Query: 32  FKEKVGRGSSGTVYKG---------AM--INRQLVAVNRLEKVLDEREREFQTEIKVIGR 80
             + +G G+ G V            A+  I+++  A+    +         +TEI+++ +
Sbjct: 139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALN--VETEIEILKK 196

Query: 81  THHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT--GIARDIARGI 138
            +H  ++++  +  +     +V E M  G L D +   ++     E T       +   +
Sbjct: 197 LNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLK---EATCKLYFYQMLLAV 252

Query: 139 LYLHDECETQIIHCDIKPQNILMDEN 164
            YLH+     IIH D+KP+N+L+   
Sbjct: 253 QYLHEN---GIIHRDLKPENVLLSSQ 275

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 14/134 (10%)

Query: 33  KEKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRLL 90
           ++ +G G+   V     +I  Q  AV  +EK           E++++ +   HRN++ L+
Sbjct: 18  EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77

Query: 91  GYSLEVSKKI-LVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGILYLHDECE 146
            +  E   +  LV+E M  GS+   I     K+ ++ E   + + +D+A  + +LH++  
Sbjct: 78  EF-FEEEDRFYLVFEKMRGGSILSHIH----KRRHFNELEASVVVQDVASALDFLHNK-- 130

Query: 147 TQIIHCDIKPQNIL 160
             I H D+KP+NIL
Sbjct: 131 -GIAHRDLKPENIL 143

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 62.9 bits (153), Expect = 2e-12
 Identities = 42/203 (20%), Positives = 70/203 (34%), Gaps = 52/203 (25%)

Query: 10  NYSTLTTPFSFSYAELKKITDG--FKEKVGRGSSGTVYKGAMI-NRQLVAV-----NRLE 61
           ++S+      F    L ++      K  +G+GS G V        R + A+     N++ 
Sbjct: 6   HHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIR 65

Query: 62  KVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLAD-ILFNAE 119
           ++  +     +TE++++ + HH N+ RL     E  + I LV E    G L D +    +
Sbjct: 66  QINPKDVERIKTEVRLMKKLHHPNIARLYEV-YEDEQYICLVMELCHGGHLLDKLNVFID 124

Query: 120 KQPNWIERTG--------------------------------------IARDIARGILYL 141
                                                           I R I   + YL
Sbjct: 125 DSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184

Query: 142 HDECETQIIHCDIKPQNILMDEN 164
           H++    I H DIKP+N L   N
Sbjct: 185 HNQ---GICHRDIKPENFLFSTN 204

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 13/158 (8%)

Query: 12  STLTTPFSFSYAELKKITDG--FKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKV-LDER 67
             +     F      K +D    KE++G+G+   V +          A   +    L  R
Sbjct: 11  QQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR 70

Query: 68  ERE-FQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIE 126
           + +  + E ++  +  H N+VRL     E S   LV++ ++ G L + +    ++  + E
Sbjct: 71  DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VARE-FYSE 127

Query: 127 R--TGIARDIARGILYLHDECETQIIHCDIKPQNILMD 162
              +   + I   I Y H      I+H ++KP+N+L+ 
Sbjct: 128 ADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLA 162

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 63.1 bits (153), Expect = 3e-12
 Identities = 17/172 (9%), Positives = 37/172 (21%), Gaps = 46/172 (26%)

Query: 32  FKEKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERERE-------FQTEIKVIGRTHH 83
             E +  G    V+    +   +  A+    KV                       R   
Sbjct: 66  LVEPLRVGDRSVVFLVRDVERLEDFAL----KVFTMGAENSRSELERLHEATFAAARLLG 121

Query: 84  RNLVRLLGY--------------------------SLEVSKKILVYEYMS-----NGSLA 112
            +                                    V+  +L+    S       S  
Sbjct: 122 ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTL 181

Query: 113 DILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
           D ++        +    +   + R    L  +    ++H    P N+ +  +
Sbjct: 182 DFVYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHGHFTPDNLFIMPD 230

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 62.7 bits (153), Expect = 3e-12
 Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 13/134 (9%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
            + ++GRG++  VY+      ++  A+  L+K +D++    +TEI V+ R  H N+++L 
Sbjct: 57  VESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI--VRTEIGVLLRLSHPNIIKLK 114

Query: 91  GYSLEVSKKILVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGILYLHDECET 147
                 ++  LV E ++ G L D I+    ++  + ER      + I   + YLH+    
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIV----EKGYYSERDAADAVKQILEAVAYLHEN--- 167

Query: 148 QIIHCDIKPQNILM 161
            I+H D+KP+N+L 
Sbjct: 168 GIVHRDLKPENLLY 181

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 62.2 bits (152), Expect = 3e-12
 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 13/136 (9%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
            +  +GRGS G V        R   A  ++ K   E    F+ EI+++    H N++RL 
Sbjct: 13  LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72

Query: 91  GYSLEVSKKI-LVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGILYLHDECE 146
               E +  I LV E  + G L + ++     +  + E     I +D+   + Y H    
Sbjct: 73  ET-FEDNTDIYLVMELCTGGELFERVV----HKRVFRESDAARIMKDVLSAVAYCHKL-- 125

Query: 147 TQIIHCDIKPQNILMD 162
             + H D+KP+N L  
Sbjct: 126 -NVAHRDLKPENFLFL 140

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 62.9 bits (153), Expect = 3e-12
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 22/156 (14%)

Query: 23  AELKKITDGFK---EKVGRGSSGTVYKG---AMINRQLVAVNRLEKVLDEREREFQTEIK 76
           +E +++ D F+    KVGRG+ G VYK       + +  A+ ++E            EI 
Sbjct: 13  SERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG--TGISMSACREIA 70

Query: 77  VIGRTHHRNLVRLLGYSLE-VSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARD- 133
           ++    H N++ L    L    +K+ L+++Y  +  L  I+          +   + R  
Sbjct: 71  LLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGM 129

Query: 134 -------IARGILYLHDECETQIIHCDIKPQNILMD 162
                  I  GI YLH      ++H D+KP NIL+ 
Sbjct: 130 VKSLLYQILDGIHYLHAN---WVLHRDLKPANILVM 162

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 62.2 bits (152), Expect = 3e-12
 Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 15/138 (10%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEK--VLDEREREFQTEIKVIGRTHHRNLVR 88
               +G+GS G V K      +Q  AV  + K    ++       E++++ +  H N+++
Sbjct: 26  IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85

Query: 89  LLGYSLEVSKKI-LVYEYMSNGSLAD-ILFNAEKQPNWIERT--GIARDIARGILYLHDE 144
           L    LE S    +V E  + G L D I+    K+  + E     I + +  GI Y+H  
Sbjct: 86  LFEI-LEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHKH 140

Query: 145 CETQIIHCDIKPQNILMD 162
               I+H D+KP+NIL++
Sbjct: 141 ---NIVHRDLKPENILLE 155

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 61.9 bits (151), Expect = 4e-12
 Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 19/138 (13%)

Query: 30  DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDERERE-FQTEIKVIGR-THHRNL 86
           D   + +G GS     K     + Q  AV    K++ +R     Q EI  +     H N+
Sbjct: 13  DLKDKPLGEGSFSICRKCVHKKSNQAFAV----KIISKRMEANTQKEITALKLCEGHPNI 68

Query: 87  VRLLGYSLEVSKKI-LVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGILYLH 142
           V+L            LV E ++ G L + I     K+ ++ E   + I R +   + ++H
Sbjct: 69  VKLHEV-FHDQLHTFLVMELLNGGELFERIK----KKKHFSETEASYIMRKLVSAVSHMH 123

Query: 143 DECETQIIHCDIKPQNIL 160
           D     ++H D+KP+N+L
Sbjct: 124 DV---GVVHRDLKPENLL 138

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 62.0 bits (151), Expect = 5e-12
 Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 17/136 (12%)

Query: 33  KEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           K+ +G G +G V +       Q  A+  L      R +E     +  G     ++V +L 
Sbjct: 34  KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR-QEVDHHWQASG---GPHIVCILD 89

Query: 92  Y---SLEVSKKI-LVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGILYLHDE 144
                    + + ++ E M  G L   I         + ER    I RDI   I +LH  
Sbjct: 90  VYENMHHGKRCLLIIMECMEGGELFSRIQ--ERGDQAFTEREAAEIMRDIGTAIQFLHSH 147

Query: 145 CETQIIHCDIKPQNIL 160
               I H D+KP+N+L
Sbjct: 148 ---NIAHRDVKPENLL 160

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 61.8 bits (151), Expect = 5e-12
 Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 19/141 (13%)

Query: 32  FKEKVGRGSSGTVYKGAMINR---QLVAV-----NRLEKVLDERERE-FQTEIKVIGRTH 82
             E++G G    V K     +   +  A       RL        RE  + E+ ++    
Sbjct: 9   MGEELGSGQFAIVRKC--RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66

Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER--TGIARDIARGILY 140
           H N++ L       +  +L+ E +S G L D L  AEK+ +  E   T   + I  G+ Y
Sbjct: 67  HPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKE-SLTEDEATQFLKQILDGVHY 123

Query: 141 LHDECETQIIHCDIKPQNILM 161
           LH +   +I H D+KP+NI++
Sbjct: 124 LHSK---RIAHFDLKPENIML 141

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 62.4 bits (152), Expect = 5e-12
 Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 19/138 (13%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRL 89
             + +G G +G V +      ++  A+    K+L +  +  + E+++  R +   ++VR+
Sbjct: 66  TSQVLGLGINGKVLQIFNKRTQEKFAL----KMLQDCPK-ARREVELHWRASQCPHIVRI 120

Query: 90  LGY---SLEVSKKI-LVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGILYLH 142
           +          K + +V E +  G L   I         + ER  + I + I   I YLH
Sbjct: 121 VDVYENLYAGRKCLLIVMECLDGGELFSRIQ--DRGDQAFTEREASEIMKSIGEAIQYLH 178

Query: 143 DECETQIIHCDIKPQNIL 160
                 I H D+KP+N+L
Sbjct: 179 SI---NIAHRDVKPENLL 193

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 61.5 bits (150), Expect = 7e-12
 Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 19/141 (13%)

Query: 32  FKEKVGRGSSGTVYKGAMINR---QLVAV-----NRLEKVLDERERE-FQTEIKVIGRTH 82
             E++G G    V K     +      A       +         RE  + E+ ++ +  
Sbjct: 16  IGEELGSGQFAIVKKC--REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73

Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER--TGIARDIARGILY 140
           H N++ L       +  +L+ E +S G L D L  A+K+ +  E   T   + I  G+ Y
Sbjct: 74  HHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKE-SLSEEEATSFIKQILDGVNY 130

Query: 141 LHDECETQIIHCDIKPQNILM 161
           LH +   +I H D+KP+NI++
Sbjct: 131 LHTK---KIAHFDLKPENIML 148

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 61.5 bits (150), Expect = 8e-12
 Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 15/139 (10%)

Query: 37  GRGSSGTVYKGA-MINRQLVAVNRLEKV-LDERERE-FQTEIKVIGRTHHRNLVRLLGYS 93
           G+G+   V     ++  + VA+  ++K  L+    +    E++++   +H N+V+L    
Sbjct: 24  GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF--- 80

Query: 94  LEV---SKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
            EV    K + L+ EY S G + D L    +      R+   R I   + Y H +    I
Sbjct: 81  -EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS-KFRQIVSAVQYCHQKR---I 135

Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D+K +N+L+D +   K
Sbjct: 136 VHRDLKAENLLLDADMNIK 154

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 61.2 bits (149), Expect = 8e-12
 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 19/138 (13%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRL 89
             + +G G +G V +      ++  A+  L+     R      E+++  R +   ++VR+
Sbjct: 22  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCPHIVRI 76

Query: 90  LGY---SLEVSKKI-LVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGILYLH 142
           +          K + +V E +  G L   I         + ER  + I + I   I YLH
Sbjct: 77  VDVYENLYAGRKCLLIVMECLDGGELFSRIQ--DRGDQAFTEREASEIMKSIGEAIQYLH 134

Query: 143 DECETQIIHCDIKPQNIL 160
                 I H D+KP+N+L
Sbjct: 135 SI---NIAHRDVKPENLL 149

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 61.6 bits (149), Expect = 8e-12
 Identities = 17/167 (10%), Positives = 56/167 (33%), Gaps = 39/167 (23%)

Query: 34  EKVGRGSSGTVYKG---------AM----------------INRQLVAVNRLEKVLDERE 68
             +G+       +           +                +  +++ +  L  + ++++
Sbjct: 79  TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQ 138

Query: 69  ----REFQTEIKVIGRTHHRNLVRLLGY--SLEVSKKILVYEYM--SNGSLADILFN--- 117
                 F     ++     + ++R+      + V  +  +Y  M  +  +  ++L +   
Sbjct: 139 AKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSS 198

Query: 118 AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
             K      R  +   + R +  LH      ++H  ++P +I++D+ 
Sbjct: 199 THKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQR 242

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 61.6 bits (150), Expect = 9e-12
 Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 26/168 (15%)

Query: 16  TPFSFSYAELKKITDG--FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEK---------- 62
            P  +   +  KI +      K+G G+ G V            A+  ++K          
Sbjct: 22  NPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSD 81

Query: 63  ---VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLAD-ILFNA 118
               +++   E   EI ++    H N+++L     +     LV E+   G L + I+   
Sbjct: 82  DNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII--- 138

Query: 119 EKQPNWIERT--GIARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
             +  + E     I + I  GI YLH      I+H DIKP+NIL++  
Sbjct: 139 -NRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENK 182

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 61.2 bits (149), Expect = 9e-12
 Identities = 30/148 (20%), Positives = 61/148 (41%), Gaps = 26/148 (17%)

Query: 32  FKEKVGRGSSGTVYKG---------AM--INRQLVAVNRLEKVLDEREREFQTEIKVIGR 80
             + +G G+ G V            A+  I+++  A+    +         +TEI+++ +
Sbjct: 14  MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN--VETEIEILKK 71

Query: 81  THHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNA--EKQPNWIERT--GIARDIAR 136
            +H  ++++  +  +     +V E M  G L    F+     +    E T       +  
Sbjct: 72  LNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNK-RLKEATCKLYFYQMLL 125

Query: 137 GILYLHDECETQIIHCDIKPQNILMDEN 164
            + YLH+     IIH D+KP+N+L+   
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQ 150

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 61.2 bits (149), Expect = 1e-11
 Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 15/139 (10%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAV-----NRLEKVLDERERE-FQTEIKVIGRTHHR 84
             E++G G    V K          A       +         RE  + E+ ++ +  H 
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHP 75

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER--TGIARDIARGILYLH 142
           N++ L       +  +L+ E +S G L D L  A+K+ +  E   T   + I  G+ YLH
Sbjct: 76  NIITLHDVYENRTDVVLILELVSGGELFDFL--AQKE-SLSEEEATSFIKQILDGVNYLH 132

Query: 143 DECETQIIHCDIKPQNILM 161
                +I H D+KP+NI++
Sbjct: 133 ---TKKIAHFDLKPENIML 148

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 60.8 bits (148), Expect = 1e-11
 Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 13/135 (9%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKV-LDERERE-FQTEIKVIGRTHHRNLVR 88
             E++G+G+   V +   +   Q  A   +    L  R+ +  + E ++     H N+VR
Sbjct: 15  LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVR 74

Query: 89  LLGYSLEVSKKILVYEYMSNGSLAD-ILFNAEKQPNWIER--TGIARDIARGILYLHDEC 145
           L     E     L+++ ++ G L + I+     +  + E   +   + I   +L+ H   
Sbjct: 75  LHDSISEEGHHYLIFDLVTGGELFEDIV----AREYYSEADASHCIQQILEAVLHCHQM- 129

Query: 146 ETQIIHCDIKPQNIL 160
              ++H ++KP+N+L
Sbjct: 130 --GVVHRNLKPENLL 142

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 59.7 bits (144), Expect = 4e-11
 Identities = 16/167 (9%), Positives = 55/167 (32%), Gaps = 39/167 (23%)

Query: 34  EKVGRGSSGTVYKG---------AM----------------INRQLVAVNRLEKVLDERE 68
             +G+       +           +                +  +++ +  L  + ++++
Sbjct: 84  TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQ 143

Query: 69  ----REFQTEIKVIGRTHHRNLVRLL--GYSLEVSKKILVYEYM--SNGSLADILFNAEK 120
                 F     ++     + ++R+      + V  +  +Y  M  +  +  ++L +   
Sbjct: 144 AKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSS 203

Query: 121 Q---PNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
                    R  +   + R +  LH      ++H  ++P +I++D+ 
Sbjct: 204 THKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQR 247

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 58.8 bits (143), Expect = 6e-11
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 15/138 (10%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAV-----NRLEKVLDERERE-FQTEIKVIGRTHHR 84
             E++G G    V K          A       R +       RE  + E+ ++    H 
Sbjct: 15  TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER--TGIARDIARGILYLH 142
           N++ L       +  IL+ E ++ G L D L  AEK+ +  E   T   + I  G+ YLH
Sbjct: 75  NVITLHEVYENKTDVILILELVAGGELFDFL--AEKE-SLTEEEATEFLKQILNGVYYLH 131

Query: 143 DECETQIIHCDIKPQNIL 160
                QI H D+KP+NI+
Sbjct: 132 ---SLQIAHFDLKPENIM 146

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 57.7 bits (140), Expect = 1e-10
 Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 26/147 (17%)

Query: 37  GRGSSGTVYKGA-MINRQLVAVNRLEKVLDER--------EREFQTEIKVIGRTHHRNLV 87
           G GS G V +          AV    K+L ++        E   + EI+++ R  H+N++
Sbjct: 14  GEGSYGKVKEVLDSETLCRRAV----KILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69

Query: 88  RLLG-YSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARD----IARGILYL 141
           +L+     E  +K+ +V EY   G     + ++  +  +      A      +  G+ YL
Sbjct: 70  QLVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRFPVCQ--AHGYFCQLIDGLEYL 125

Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
           H +    I+H DIKP N+L+      K
Sbjct: 126 HSQG---IVHKDIKPGNLLLTTGGTLK 149

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 57.6 bits (140), Expect = 2e-10
 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 26/144 (18%)

Query: 37  GRGSSGTVYKGA-MINRQLVAV---NRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           G G+ G V      +  + VAV   +  ++ +D  E   + EI +    +H N+V+  G+
Sbjct: 16  GEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPEN-IKKEICINKMLNHENVVKFYGH 73

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIAR--------GILYLHDE 144
             E + + L  EY S G L D +             G+    A+        G++YLH  
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRI---------EPDIGMPEPDAQRFFHQLMAGVVYLHGI 124

Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
               I H DIKP+N+L+DE    K
Sbjct: 125 ---GITHRDIKPENLLLDERDNLK 145

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 46/171 (26%)

Query: 33  KEKVGRGSSGTVYKGA-MINRQLVAV-----NRLEKVLDEREREFQT------------- 73
           K+++G+GS G V       +    A+      +L +      R                 
Sbjct: 18  KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPR 77

Query: 74  --------EIKVIGRTHHRNLVRLLGYSLEV-----SKKI-LVYEYMSNGSLADILFNAE 119
                   EI ++ +  H N+V+L+    EV        + +V+E ++ G + ++     
Sbjct: 78  GPIEQVYQEIAILKKLDHPNVVKLV----EVLDDPNEDHLYMVFELVNQGPVMEVP---T 130

Query: 120 KQPNWIERTG--IARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            +P   E       +D+ +GI YLH     +IIH DIKP N+L+ E+   K
Sbjct: 131 LKP-LSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIK 177

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 26/144 (18%)

Query: 37  GRGSSGTVYKGA-MINRQLVAV---NRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           G G+ G V      +  + VAV   +  ++ +D  E   + EI +    +H N+V+  G+
Sbjct: 16  GEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPEN-IKKEICINKMLNHENVVKFYGH 73

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIAR--------GILYLHDE 144
             E + + L  EY S G L D +             G+    A+        G++YLH  
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRI---------EPDIGMPEPDAQRFFHQLMAGVVYLHGI 124

Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
               I H DIKP+N+L+DE    K
Sbjct: 125 ---GITHRDIKPENLLLDERDNLK 145

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 57.1 bits (138), Expect = 3e-10
 Identities = 31/155 (20%), Positives = 70/155 (45%), Gaps = 43/155 (27%)

Query: 33  KEKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
           +  +G GS G V +    + +++VA+ ++ +V ++    +R  + EI ++ R +H ++V+
Sbjct: 58  RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR-EIAILNRLNHDHVVK 116

Query: 89  LL----GYSLEVSKKI-LVYEYM---------SNGSLAD-----ILFNAEKQPNWIERTG 129
           +L       +E   ++ +V E           +   L +     +L+N            
Sbjct: 117 VLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYN------------ 164

Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
               +  G+ Y+H      I+H D+KP N L++++
Sbjct: 165 ----LLVGVKYVH---SAGILHRDLKPANCLVNQD 192

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 56.3 bits (136), Expect = 6e-10
 Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 31/154 (20%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT---EIKVI----------- 78
            K+G G   TV+    M+N   VA+    K++   +   +    EIK++           
Sbjct: 25  RKLGWGHFSTVWLAKDMVNNTHVAM----KIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80

Query: 79  GRTHHRNLVRLLGY----SLEVSKKILVYEYMSNGSLADILFNAEKQP---NWIERTGIA 131
                 ++++LL +           ++V+E +   +L  ++   E +     ++++  I+
Sbjct: 81  DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGE-NLLALIKKYEHRGIPLIYVKQ--IS 137

Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
           + +  G+ Y+H  C   IIH DIKP+N+LM+   
Sbjct: 138 KQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 55.9 bits (135), Expect = 7e-10
 Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 20/148 (13%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEK--------VLDEREREFQTEIKVIGRTHHR 84
             +G G+ G V+        + V V  ++K        + D +  +   EI ++ R  H 
Sbjct: 30  SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89

Query: 85  NLVRLLGYSLEVSKKI-LVYEYMSNGS-LADILFNAEKQPNWIERTG--IARDIARGILY 140
           N++++L    E      LV E   +G  L   +   ++ P   E     I R +   + Y
Sbjct: 90  NIIKVLDI-FENQGFFQLVMEKHGSGLDLFAFI---DRHPRLDEPLASYIFRQLVSAVGY 145

Query: 141 LHDECETQIIHCDIKPQNILMDENRCAK 168
           L  +    IIH DIK +NI++ E+   K
Sbjct: 146 LRLKD---IIHRDIKDENIVIAEDFTIK 170

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 55.2 bits (133), Expect = 2e-09
 Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 18/141 (12%)

Query: 37  GRGSSGTVYKGA-MINRQLVAV---NRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLLG 91
           G G+ G V  G   +    VAV   NR +K+         + EI+ +    H ++++L  
Sbjct: 25  GVGTFGKVKVGKHELTGHKVAVKILNR-QKIRSLDVVGKIRREIQNLKLFRHPHIIKL-- 81

Query: 92  YS-LEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIA--RDIARGILYLHDECET 147
           Y  +     I +V EY+S G L D +    +     E+      + I  G+ Y H     
Sbjct: 82  YQVISTPSDIFMVMEYVSGGELFDYICKNGRLD---EKESRRLFQQILSGVDYCHRHM-- 136

Query: 148 QIIHCDIKPQNILMDENRCAK 168
            ++H D+KP+N+L+D +  AK
Sbjct: 137 -VVHRDLKPENVLLDAHMNAK 156

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 54.7 bits (132), Expect = 2e-09
 Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 28/141 (19%)

Query: 37  GRGSSGTVYKGA-MINRQLVAVNRLEK--VLDER-EREFQTEIKVIGRTHHRNLVRLLGY 92
           G G+ G        + ++LVAV  +E+   +DE  +RE    I       H N+VR    
Sbjct: 29  GSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQRE----IINHRSLRHPNIVRFK-- 82

Query: 93  SLEV---SKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARD----IARGILYLHDE 144
             EV      + ++ EY S G L + + NA +     E    AR     +  G+ Y H  
Sbjct: 83  --EVILTPTHLAIIMEYASGGELYERICNAGRFS---EDE--ARFFFQQLLSGVSYCHSM 135

Query: 145 CETQIIHCDIKPQNILMDENR 165
              QI H D+K +N L+D + 
Sbjct: 136 ---QICHRDLKLENTLLDGSP 153

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 54.5 bits (132), Expect = 2e-09
 Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 12/138 (8%)

Query: 37  GRGSSGTVYKGA-MINRQLVAVNRLEK--VLDERERE-FQTEIKVIGRTHHRNLVRLLGY 92
           G G+ G V  G   +    VAV  L +  +         + EI+ +    H ++++L  Y
Sbjct: 20  GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL--Y 77

Query: 93  S-LEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
             +       +V EY+S G L D +    +      R  + + I   + Y H      ++
Sbjct: 78  QVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR-LFQQILSAVDYCHRHM---VV 133

Query: 151 HCDIKPQNILMDENRCAK 168
           H D+KP+N+L+D +  AK
Sbjct: 134 HRDLKPENVLLDAHMNAK 151

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 53.5 bits (129), Expect = 5e-09
 Identities = 38/154 (24%), Positives = 57/154 (37%), Gaps = 34/154 (22%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAV-----NRLEKVLDER-----EREFQTEIKVIGRTH 82
             +G+G  GTV+ G  + +R  VA+     NR+              E     KV     
Sbjct: 37  PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG 96

Query: 83  HRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTG---------IAR 132
           H  ++RLL +  E  +   LV E        D LF+      +I   G            
Sbjct: 97  HPGVIRLLDW-FETQEGFMLVLERPLPA--QD-LFD------YITEKGPLGEGPSRCFFG 146

Query: 133 DIARGILYLHDECETQIIHCDIKPQNILMDENRC 166
            +   I + H      ++H DIK +NIL+D  R 
Sbjct: 147 QVVAAIQHCHSRG---VVHRDIKDENILIDLRRG 177

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 53.2 bits (128), Expect = 7e-09
 Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 48/174 (27%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           + +G GS G V +   I + +  A+   +KVL +   + + E+ ++    H N+++L+ Y
Sbjct: 13  KTLGTGSFGIVCEVFDIESGKRFAL---KKVLQDPRYKNR-ELDIMKVLDHVNIIKLVDY 68

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARD------------------- 133
                 +        +        N     +                             
Sbjct: 69  FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128

Query: 134 ---------------------IARGILYLHDECETQIIHCDIKPQNILMDENRC 166
                                + R + ++H      I H DIKPQN+L++    
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIH---SLGICHRDIKPQNLLVNSKDN 179

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 28/144 (19%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRLLG 91
            K+GRG    V++   + N + V V  L+ V   ++++ + EIK++       N++ L  
Sbjct: 42  RKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLAD 98

Query: 92  YSLEVSKK--ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIA-------RGILYLH 142
              +   +   LV+E+++N     +                  DI        + + Y H
Sbjct: 99  IVKDPVSRTPALVFEHVNNTDFKQLYQTLTDY-----------DIRFYMYEILKALDYCH 147

Query: 143 DECETQIIHCDIKPQNILMDENRC 166
                 I+H D+KP N+++D    
Sbjct: 148 ---SMGIMHRDVKPHNVMIDHEHR 168

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 51.5 bits (123), Expect = 2e-08
 Identities = 30/148 (20%), Positives = 59/148 (39%), Gaps = 17/148 (11%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERER-EFQTEIKV-IGRTHH 83
             + +GRG+ G V +            + VAV  L++     E     +E+K+ I   HH
Sbjct: 26  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85

Query: 84  RNLVRLLGYSLEVSKKILV-YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH 142
            N+V LLG   +    ++V  E+   G+L+  L +        +R        +G  +  
Sbjct: 86  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS--------KRNEFVPYKTKGARFRQ 137

Query: 143 DECETQIIHCDIKPQNILMDENRCAKNF 170
            +     I  D+K +   +  ++ + + 
Sbjct: 138 GKDYVGAIPVDLKRRLDSITSSQSSASS 165

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 51.0 bits (122), Expect = 3e-08
 Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 8/82 (9%)

Query: 92  YSLEVSKKILVY---EYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECE 146
                S K+ +Y   +     +L D +    + +         I   IA  + +LH +  
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK-- 183

Query: 147 TQIIHCDIKPQNILMDENRCAK 168
             ++H D+KP NI    +   K
Sbjct: 184 -GLMHRDLKPSNIFFTMDDVVK 204

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 50.8 bits (122), Expect = 3e-08
 Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 32/152 (21%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEK------VLDEREREFQTEIKVIGRTHHR-- 84
             +G G  G+VY G  + +   VA+  +EK                 E+ ++ +      
Sbjct: 49  PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 108

Query: 85  NLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTG---------IARDI 134
            ++RLL +  E      L+ E        D LF+      +I   G             +
Sbjct: 109 GVIRLLDW-FERPDSFVLILERPEPV--QD-LFD------FITERGALQEELARSFFWQV 158

Query: 135 ARGILYLHDECETQIIHCDIKPQNILMDENRC 166
              + + H+     ++H DIK +NIL+D NR 
Sbjct: 159 LEAVRHCHNCG---VLHRDIKDENILIDLNRG 187

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 50.5 bits (121), Expect = 5e-08
 Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 19/143 (13%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREF---QTEIKVI------GRTHH 83
           + +G+GS G V K       Q VA+    K++   +R       EI+++       + + 
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVAL----KMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLH 142
            N++ +L      +   + +E +S  +L +++   + Q   +      A  I + +  LH
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217

Query: 143 DECETQIIHCDIKPQNILMDENR 165
                +IIHCD+KP+NIL+ +  
Sbjct: 218 KN---RIIHCDLKPENILLKQQG 237

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 50.4 bits (121), Expect = 5e-08
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 15/139 (10%)

Query: 37  GRGSSGTVYKGA-MINRQLVAV---NRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLLG 91
           G GS G V        +Q VA+   +R + +         + EI  +    H ++++L  
Sbjct: 18  GEGSFGKVKLATHYKTQQKVALKFISR-QLLKKSDMHMRVEREISYLKLLRHPHIIKL-- 74

Query: 92  YS-LEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
           Y  +     I +V EY + G L D +   ++      R    + I   I Y H      I
Sbjct: 75  YDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRR-FFQQIICAIEYCHRHK---I 129

Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D+KP+N+L+D+N   K
Sbjct: 130 VHRDLKPENLLLDDNLNVK 148

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 50.3 bits (121), Expect = 6e-08
 Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 10/134 (7%)

Query: 36  VGRGSSGTVYKGAMI-NRQLVAVNRLEK--VLDEREREF-QTEIKVIGRTHHRNLVRLLG 91
           +G GS  TV     +   +  A+  LEK  ++ E +  +   E  V+ R  H   V+L  
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96

Query: 92  YSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           ++ +  +K+     Y  NG L   +           R   A +I   + YLH +    II
Sbjct: 97  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 152

Query: 151 HCDIKPQNILMDEN 164
           H D+KP+NIL++E+
Sbjct: 153 HRDLKPENILLNED 166

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 50.1 bits (120), Expect = 7e-08
 Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 20/142 (14%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERE---REFQTEIKVIGRTHHRNLVRL 89
           + +G G+ G V      I  + VA+ +L +    +    R ++ E+ ++   +H+N++ L
Sbjct: 31  KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 89

Query: 90  L-----GYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTG-IARDIARGILYLH 142
           L       SLE  + + +V E M   +L  ++    +     ER   +   +  GI +LH
Sbjct: 90  LNVFTPQKSLEEFQDVYIVMELMDA-NLCQVI----QMELDHERMSYLLYQMLCGIKHLH 144

Query: 143 DECETQIIHCDIKPQNILMDEN 164
                 IIH D+KP NI++  +
Sbjct: 145 S---AGIIHRDLKPSNIVVKSD 163

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 50.3 bits (120), Expect = 7e-08
 Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 26/157 (16%)

Query: 35  KVGRGSSGTVYKGA-MINRQLVAVNRLEKVL---------DEREREFQTEIKVIGRTHH- 83
           K+G G   TV+    +  ++ VA+    KV+            E      ++        
Sbjct: 44  KLGWGHFSTVWLSWDIQGKKFVAM----KVVKSAEHYTETALDEIRLLKSVRNSDPNDPN 99

Query: 84  RNLVRLLGYSLEVSKKI-----LVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIAR 136
           R +V  L    ++S        +V+E + +  L   +   N +  P    +  I + + +
Sbjct: 100 REMVVQLLDDFKISGVNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVKK-IIQQVLQ 157

Query: 137 GILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLW 173
           G+ YLH +C  +IIH DIKP+NIL+  N         
Sbjct: 158 GLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAA 192

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 50.0 bits (120), Expect = 7e-08
 Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 18/141 (12%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT--EIKVIGRTHHRNLVRLL 90
             VG G+ G+V       + + VA+ +L +         +   E+ ++    H N++ LL
Sbjct: 30  THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89

Query: 91  -----GYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTG-IARDIARGILYLHD 143
                  SL       LV  +M    L  I+          E+   +   + +G+ Y+H 
Sbjct: 90  DVFTPASSLRNFYDFYLVMPFM-QTDLQKIM----GLKFSEEKIQYLVYQMLKGLKYIHS 144

Query: 144 ECETQIIHCDIKPQNILMDEN 164
                ++H D+KP N+ ++E+
Sbjct: 145 ---AGVVHRDLKPGNLAVNED 162

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 49.6 bits (119), Expect = 9e-08
 Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 32/153 (20%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERE--REFQT---------EIKVIGRTH 82
             +  GS G V  G       VA+ R+   + +                  EI+++   H
Sbjct: 28  RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87

Query: 83  HRNLVRLLG----YSLEVSKKI-LVYEYMSN------GSLADILFNAEKQPNWIERTGIA 131
           H N++ L      +      K+ LV E M             ++     Q          
Sbjct: 88  HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY-------FM 140

Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
             I  G+  LH+     ++H D+ P NIL+ +N
Sbjct: 141 YHILLGLHVLHE---AGVVHRDLHPGNILLADN 170

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 49.8 bits (119), Expect = 1e-07
 Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 21/175 (12%)

Query: 2   PVKYKIDSNYSTLTTPFSFSYAELKKIT-DGFKE-KV-GRGSSGTVY----KGAMINRQL 54
           P    +DS Y      + +   E + +T + F++ +V G+G  G V     +      ++
Sbjct: 157 PFADYLDSIYFNRFLQWKWL--ERQPVTKNTFRQYRVLGKGGFGEVCACQVRA---TGKM 211

Query: 55  VAVNRLEK---VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGS 110
            A  +LEK      + E     E +++ + + R +V L  Y+ E    + LV   M+ G 
Sbjct: 212 YACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGD 270

Query: 111 LADILFNAEKQPNWIERTGI-ARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
           L   +++  +      R    A +I  G+  LH E   +I++ D+KP+NIL+D++
Sbjct: 271 LKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDH 322

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 49.4 bits (118), Expect = 1e-07
 Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 23/177 (12%)

Query: 2   PVKYKIDSNYSTLTTPFSFSYAELKKIT-DGFKE-KV-GRGSSGTVY----KGAMINRQL 54
           P +  +DS Y      +   + E + +  D F + +V GRG  G V+    K      +L
Sbjct: 158 PFQEFLDSLYFLRFLQWK--WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKA---TGKL 212

Query: 55  VAVNRLEK---VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGS 110
            A  +L K      +  +    E K++ + H R +V L  Y+ E    + LV   M+ G 
Sbjct: 213 YACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA-YAFETKTDLCLVMTIMNGGD 271

Query: 111 L-ADILFNAEKQPNWIERTGI--ARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
           +   I    E  P + E   I     I  G+ +LH      II+ D+KP+N+L+D++
Sbjct: 272 IRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDD 325

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 49.4 bits (118), Expect = 1e-07
 Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 43/155 (27%)

Query: 33  KEKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERE---REFQTEIKVIGRTHHRNLVR 88
           K  +GRGS G VY        + VA+ ++ ++ ++     R  + EI ++ R     ++R
Sbjct: 31  KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKSDYIIR 89

Query: 89  LLG----YSLEVSKKI-LVYEYM---------SNGSLAD-----ILFNAEKQPNWIERTG 129
           L        L    ++ +V E           +   L +     IL+N            
Sbjct: 90  LYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYN------------ 137

Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
               +  G  ++H   E+ IIH D+KP N L++++
Sbjct: 138 ----LLLGENFIH---ESGIIHRDLKPANCLLNQD 165

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 49.1 bits (116), Expect = 2e-07
 Identities = 27/203 (13%), Positives = 54/203 (26%), Gaps = 57/203 (28%)

Query: 15  TTPFSFSYAELKKITDGFK--EKVGRGSSGTVYKGAMINRQLVAV--------NRLEKVL 64
             P  FS+      T+  +  EK+G G  G V++  + +   VA+        + +    
Sbjct: 8   KGPVPFSHC---LPTEKLQRCEKIGEGVFGEVFQ-TIADHTPVAIKIIAIEGPDLVNGSH 63

Query: 65  DEREREFQTEIKV---------IGRTHHRNLVRLLG------------------------ 91
            +   E   EI +                  + L                          
Sbjct: 64  QKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKG 123

Query: 92  ------YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
                    +  +  +V E+   G   D+     K  +      I   +   +       
Sbjct: 124 SANDRPDFFKDDQLFIVLEFEFGGI--DLEQMRTKLSSLATAKSILHQLTASLAVAEASL 181

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             +  H D+   N+L+ +    K
Sbjct: 182 --RFEHRDLHWGNVLLKKTSLKK 202

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 15/140 (10%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT--EIKVIGRTHHRNLVRLL 90
           + VG G+ G V           VA+ +L +         +   E++++    H N++ LL
Sbjct: 31  QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90

Query: 91  -----GYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
                  +L+      LV  +M    L  ++ + +   + I+   +   + +G+ Y+H  
Sbjct: 91  DVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQF--LVYQMLKGLRYIHA- 146

Query: 145 CETQIIHCDIKPQNILMDEN 164
               IIH D+KP N+ ++E+
Sbjct: 147 --AGIIHRDLKPGNLAVNED 164

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 18/146 (12%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREF---QTEIKVI------GRTHH 83
             +G+GS G V K    + ++ VA+    K++  ++      Q E++++           
Sbjct: 60  SLIGKGSFGQVVKAYDRVEQEWVAI----KIIKNKKAFLNQAQIEVRLLELMNKHDTEMK 115

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLH 142
             +V L  + +  +   LV+E +S  +L D+L N   +   +  T   A+ +   +L+L 
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA 174

Query: 143 DECETQIIHCDIKPQNILM-DENRCA 167
              E  IIHCD+KP+NIL+ +  R A
Sbjct: 175 TP-ELSIIHCDLKPENILLCNPKRSA 199

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 48.3 bits (115), Expect = 3e-07
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 18/141 (12%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT--EIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VA+ +L +    +    +   E+ ++   +H+N++ LL
Sbjct: 68  KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127

Query: 91  -----GYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTG-IARDIARGILYLHD 143
                  +LE  + + LV E M     A+ L    +     ER   +   +  GI +LH 
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMD----AN-LCQVIQMELDHERMSYLLYQMLCGIKHLHS 182

Query: 144 ECETQIIHCDIKPQNILMDEN 164
                IIH D+KP NI++  +
Sbjct: 183 ---AGIIHRDLKPSNIVVKSD 200

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 48.2 bits (115), Expect = 4e-07
 Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 31/145 (21%)

Query: 36  VGRGSSGTVY----KGAMINRQLVAVNRLEK--VLDERERE-FQTEIKVIGRTHHRNLVR 88
           +GRG+   V     K      Q+ A+  + K  +L   E   F+ E  V+     R + +
Sbjct: 69  IGRGAFSEVAVVKMKQ---TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQ 125

Query: 89  LLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIAR--------GIL 139
           L  ++ +    + LV EY   G L  +L    ++        I  ++AR         I 
Sbjct: 126 LH-FAFQDENYLYLVMEYYVGGDLLTLLSKFGER--------IPAEMARFYLAEIVMAID 176

Query: 140 YLHDECETQIIHCDIKPQNILMDEN 164
            +H       +H DIKP NIL+D  
Sbjct: 177 SVH---RLGYVHRDIKPDNILLDRC 198

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 47.4 bits (113), Expect = 6e-07
 Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 17/138 (12%)

Query: 36  VGRGSSGTVY----KGAMINRQLVAVNRLEK--VLDERERE-FQTEIKVIGRTHHRNLVR 88
           +GRG+ G V     K      ++ A+  L K  +L   E   F+ E  V+     + +  
Sbjct: 82  IGRGAFGEVAVVKLKN---ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITT 138

Query: 89  LLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQ-PNWIERTGIARDIARGILYLHDECE 146
           L  Y+ +    + LV +Y   G L  +L   E + P  + R  +A ++   I  +H   +
Sbjct: 139 LH-YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLA-EMVIAIDSVH---Q 193

Query: 147 TQIIHCDIKPQNILMDEN 164
              +H DIKP NILMD N
Sbjct: 194 LHYVHRDIKPDNILMDMN 211

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 47.0 bits (112), Expect = 8e-07
 Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 33/145 (22%)

Query: 36  VGRGSSGTVY----KGAMINRQLVAVNRLEK--VLDERERE-FQTEIKVIGRTHHRNLVR 88
           +GRG+ G V     K     R++ A+  L K  ++   +   F  E  ++   +   +V+
Sbjct: 77  IGRGAFGEVQLVRHKS---TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 133

Query: 89  LLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIAR--------GIL 139
           L  Y+ +  + + +V EYM  G L +++              +    AR         + 
Sbjct: 134 LF-YAFQDDRYLYMVMEYMPGGDLVNLM----------SNYDVPEKWARFYTAEVVLALD 182

Query: 140 YLHDECETQIIHCDIKPQNILMDEN 164
            +H       IH D+KP N+L+D++
Sbjct: 183 AIH---SMGFIHRDVKPDNMLLDKS 204

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 18/145 (12%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREF---QTEIKVIGR-----THHR 84
            K+G G+ G V     + N++  AV    KV+   ++     + E  ++ +      ++ 
Sbjct: 41  RKMGDGTFGRVLLCQHIDNKKYYAV----KVVRNIKKYTRSAKIEADILKKIQNDDINNN 96

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLHD 143
           N+V+  G  +      L++E +   SL +I+         IE       +I + + YL  
Sbjct: 97  NIVKYHGKFMYYDHMCLIFEPLGP-SLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK 155

Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
                + H D+KP+NIL+D+    K
Sbjct: 156 M---SLTHTDLKPENILLDDPYFEK 177

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 33/159 (20%), Positives = 61/159 (38%), Gaps = 43/159 (27%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRL--EKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G +G V+        + VA+ ++        +    + EIK+I R  H N+V++ 
Sbjct: 17  KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVK-HALR-EIKIIRRLDHDNIVKVF 74

Query: 91  -------------GYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARD--- 133
                          SL     + +V EYM    LA++L             G   +   
Sbjct: 75  EILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVL-----------EQGPLLEEHA 122

Query: 134 ------IARGILYLHDECETQIIHCDIKPQNILMDENRC 166
                 + RG+ Y+H      ++H D+KP N+ ++    
Sbjct: 123 RLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDL 158

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 30/147 (20%), Positives = 62/147 (42%), Gaps = 20/147 (13%)

Query: 34  EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDEREREF---QTEIKVI------GRTH 82
           + +G G+ G V +        + VAV    K++   +R     ++EI+V+          
Sbjct: 20  DTLGEGAFGKVVECIDHKAGGRHVAV----KIVKNVDRYCEAARSEIQVLEHLNTTDPNS 75

Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYL 141
               V++L +        +V+E +   S  D +      P  ++    +A  I + + +L
Sbjct: 76  TFRCVQMLEWFEHHGHICIVFELLGL-STYDFIKENGFLPFRLDHIRKMAYQICKSVNFL 134

Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
           H     ++ H D+KP+NIL  ++   +
Sbjct: 135 HSN---KLTHTDLKPENILFVQSDYTE 158

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 45.6 bits (108), Expect = 3e-06
 Identities = 30/142 (21%), Positives = 62/142 (43%), Gaps = 23/142 (16%)

Query: 36  VGRGSSGTVY----KGAMINRQLVAVNRLEK---VLDEREREFQTEIKV---IGRTHHRN 85
           +GRG  G VY           ++ A+  L+K    + + E     E  +   +       
Sbjct: 197 IGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253

Query: 86  LVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGI--ARDIARGILYLH 142
           +V +  Y+     K+  + + M+ G   D+ ++  +   + E      A +I  G+ ++H
Sbjct: 254 IVCM-SYAFHTPDKLSFILDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309

Query: 143 DECETQIIHCDIKPQNILMDEN 164
           +     +++ D+KP NIL+DE+
Sbjct: 310 NR---FVVYRDLKPANILLDEH 328

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 25/145 (17%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT--EIKVIGRTHHRNLVRLL 90
             VG G+ G+V           VAV +L +         +T  E++++    H N++ LL
Sbjct: 35  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94

Query: 91  -----GYSLEVSKKI-LVYEYMSNGSLADI-----LFNAEKQPNWIERTGIARDIARGIL 139
                  SLE    + LV   M    L +I     L +   Q        +   I RG+ 
Sbjct: 95  DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 146

Query: 140 YLHDECETQIIHCDIKPQNILMDEN 164
           Y+H      IIH D+KP N+ ++E+
Sbjct: 147 YIHS---ADIIHRDLKPSNLAVNED 168

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 26/147 (17%), Positives = 55/147 (37%), Gaps = 20/147 (13%)

Query: 34  EKVGRGSSGTVYKGA--MINRQLVAVNRLEKVLDEREREF---QTEIKVI------GRTH 82
             +G G+ G V +       +  VA+    K++    +     + EI V+       + +
Sbjct: 25  GNLGEGTFGKVVECLDHARGKSQVAL----KIIRNVGKYREAARLEINVLKKIKEKDKEN 80

Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYL 141
               V +  +        + +E +   +  + L     QP  +     +A  +   + +L
Sbjct: 81  KFLCVLMSDWFNFHGHMCIAFELLGK-NTFEFLKENNFQPYPLPHVRHMAYQLCHALRFL 139

Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
           H+    Q+ H D+KP+NIL   +    
Sbjct: 140 HEN---QLTHTDLKPENILFVNSEFET 163

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 44.3 bits (105), Expect = 6e-06
 Identities = 28/131 (21%), Positives = 59/131 (45%), Gaps = 10/131 (7%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH-RNLVRLLG 91
           +K+G G+ G +  G  +   + VA+ +LE +   R  +   E +   +      + ++  
Sbjct: 15  KKIGCGNFGELRLGKNLYTNEYVAI-KLEPM-KSRAPQLHLEYRFYKQLGSGDGIPQVYY 72

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLHDECETQII 150
           +        +V E +   SL D LF+   +   ++    IA  +   + Y+H +    +I
Sbjct: 73  FGPCGKYNAMVLELLGP-SLED-LFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN---LI 127

Query: 151 HCDIKPQNILM 161
           + D+KP+N L+
Sbjct: 128 YRDVKPENFLI 138

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 35/149 (23%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVA---VNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL 89
             +G G+ G V      +N+  VA   ++  E     + R  + EIK++ R  H N++ +
Sbjct: 33  SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLR-EIKILLRFRHENIIGI 90

Query: 90  LG----YSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARD---------IA 135
                  ++E  K + +V + M    L  +L           +T    +         I 
Sbjct: 91  NDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-----------KTQHLSNDHICYFLYQIL 138

Query: 136 RGILYLHDECETQIIHCDIKPQNILMDEN 164
           RG+ Y+H      ++H D+KP N+L++  
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTT 164

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 33/150 (22%)

Query: 32  FKEKVGRGSSGTVYKGA-MINRQLVA---VNRLEKVLDEREREFQTEIKVIGRTHHRNLV 87
            K  +G G+ G V         ++VA   +   +K L    R  + EIK++    H N++
Sbjct: 15  LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFAL-RTLR-EIKILKHFKHENII 72

Query: 88  RLL----GYSLEVSKKI-LVYEYM--------SNGSLADILFNAEKQPNWIERTGIARDI 134
            +       S E   ++ ++ E M        S   L+D       Q             
Sbjct: 73  TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD----HIQY-------FIYQT 121

Query: 135 ARGILYLHDECETQIIHCDIKPQNILMDEN 164
            R +  LH    + +IH D+KP N+L++ N
Sbjct: 122 LRAVKVLHG---SNVIHRDLKPSNLLINSN 148

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 20/140 (14%)

Query: 36  VGRGSSGTVY----KGAMINRQLVAVNRLEK--VLDEREREFQTEIKVIGRTHHRNLVRL 89
           +G+GS G V+          RQL A+  L+K  +        + E  ++   +H  +V+L
Sbjct: 32  LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91

Query: 90  LGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR----DIARGILYLHDE 144
             Y+ +   K+ L+ +++  G L        K+  + E     +    ++A  + +LH  
Sbjct: 92  H-YAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEED--VKFYLAELALALDHLH-- 143

Query: 145 CETQIIHCDIKPQNILMDEN 164
               II+ D+KP+NIL+DE 
Sbjct: 144 -SLGIIYRDLKPENILLDEE 162

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Length = 540

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 28/165 (16%), Positives = 66/165 (40%), Gaps = 19/165 (11%)

Query: 7   IDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEK---- 62
           I  NY T     ++      K     +  +G+G+   + + + ++  ++   R++K    
Sbjct: 315 IIPNYRTDMVEVNWIKEIKGKKRKIPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRD 374

Query: 63  -VLDEREREFQT--EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAE 119
             LDE  R+ +T  E + +       +     + +++  K ++  Y++     D++    
Sbjct: 375 ERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVI---- 430

Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
                 +   IA  I   +  LH   +  +IH D+   N + D++
Sbjct: 431 -----EDNLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDKD 467

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 35/138 (25%), Positives = 71/138 (51%), Gaps = 18/138 (13%)

Query: 36  VGRGSSGTVY----KGAMINRQLVAVNRLEK--VLDERERE-FQTEIKVIGRTHHRNLVR 88
           +G GS G V+    +    N +  A+  L+K  V+  ++ E    E  ++    H  ++R
Sbjct: 14  LGTGSFGRVHLIRSRH---NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIR 70

Query: 89  LLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGI-ARDIARGILYLHDECE 146
           +   + + +++I ++ +Y+  G L  +L  +++ PN        A ++   + YLH +  
Sbjct: 71  MW-GTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN--PVAKFYAAEVCLALEYLHSK-- 125

Query: 147 TQIIHCDIKPQNILMDEN 164
             II+ D+KP+NIL+D+N
Sbjct: 126 -DIIYRDLKPENILLDKN 142

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 14/136 (10%)

Query: 36  VGRGSSGTVY----KGAMINRQLVAVNRLEK--VLDERERE-FQTEIKVIGRTHHRNLVR 88
           +G GS G V     K    +    A+  L+K  V+  ++ E    E +++   +   LV+
Sbjct: 49  LGTGSFGRVMLVKHKE---SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105

Query: 89  LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
           L     + S   +V EY++ G +   L    +      R   A  I     YLH      
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLHSL---D 161

Query: 149 IIHCDIKPQNILMDEN 164
           +I+ D+KP+N+L+D+ 
Sbjct: 162 LIYRDLKPENLLIDQQ 177

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 42.1 bits (100), Expect = 4e-05
 Identities = 33/142 (23%), Positives = 70/142 (49%), Gaps = 22/142 (15%)

Query: 36  VGRGSSGTVY----KGAMINRQLVAVNRLEK---VLDEREREF-QTEIKVIGRTHHRNLV 87
           +G+G  G V+           ++ A+  L+K   V + ++    + E  ++    H  +V
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84

Query: 88  RLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR----DIARGILYLH 142
            L+ Y+ +   K+ L+ EY+S G   ++    E++  ++E T  A     +I+  + +LH
Sbjct: 85  DLI-YAFQTGGKLYLILEYLSGG---ELFMQLEREGIFMEDT--ACFYLAEISMALGHLH 138

Query: 143 DECETQIIHCDIKPQNILMDEN 164
            +    II+ D+KP+NI+++  
Sbjct: 139 QK---GIIYRDLKPENIMLNHQ 157

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 41.8 bits (99), Expect = 4e-05
 Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 24/141 (17%)

Query: 36  VGRGSSGTV----YKGAMINRQLVAVNRLEK--VLDEREREF-QTEIKVIGRTHHRNLVR 88
           +G+G+ G V     K      +  A+  L K  ++ + E     TE +V+  T H  L  
Sbjct: 13  LGKGTFGKVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69

Query: 89  LLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR----DIARGILYLHD 143
           L  Y+ +   ++  V EY + G   ++ F+  ++  + E    AR    +I   + YLH 
Sbjct: 70  LK-YAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEER--ARFYGAEIVSALEYLH- 122

Query: 144 ECETQIIHCDIKPQNILMDEN 164
                +++ DIK +N+++D++
Sbjct: 123 --SRDVVYRDIKLENLMLDKD 141

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 23/141 (16%)

Query: 36  VGRGSSGTVY----KGAMINRQLVAVNRLEK--VLDEREREF-QTEIKVIGRTHHRNLVR 88
           +G+G+ G V     K      +  A+  L+K  ++ + E     TE +V+  + H  L  
Sbjct: 156 LGKGTFGKVILVKEKA---TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 212

Query: 89  LLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR----DIARGILYLHD 143
           L  YS +   ++  V EY + G   ++ F+  ++  + E    AR    +I   + YLH 
Sbjct: 213 LK-YSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDR--ARFYGAEIVSALDYLHS 266

Query: 144 ECETQIIHCDIKPQNILMDEN 164
           E    +++ D+K +N+++D++
Sbjct: 267 EKN--VVYRDLKLENLMLDKD 285

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 26/131 (19%), Positives = 58/131 (44%), Gaps = 10/131 (7%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIG-RTHHRNLVRLLG 91
            ++G GS G +++G  ++N Q VA+ + E        + + E +          +  +  
Sbjct: 16  RRIGEGSFGVIFEGTNLLNNQQVAI-KFEPR-RSDAPQLRDEYRTYKLLAGCTGIPNVYY 73

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLHDECETQII 150
           +  E    +LV + +   SL D L +   +   ++     A+ +   +  +H++    ++
Sbjct: 74  FGQEGLHNVLVIDLLGP-SLED-LLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LV 128

Query: 151 HCDIKPQNILM 161
           + DIKP N L+
Sbjct: 129 YRDIKPDNFLI 139

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 41.9 bits (98), Expect = 5e-05
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 10/142 (7%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRLLG 91
            K+G GS G +Y G  +   + VA+ +LE V   +  +   E K+         +  +  
Sbjct: 13  RKIGSGSFGEIYLGTNIQTNEEVAI-KLENV-KTKHPQLLYESKIYRILQGGTGIPNVRW 70

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLHDECETQII 150
           + +E    +LV + +   SL D LFN   +   ++    +A  +   + ++H +     +
Sbjct: 71  FGVEGDYNVLVMDLLGP-SLED-LFNFCSRKLSLKTVLMLADQMINRVEFVHSKS---FL 125

Query: 151 HCDIKPQNILMDENRCAKNFRL 172
           H DIKP N LM   R A    +
Sbjct: 126 HRDIKPDNFLMGLGRRANQVYI 147

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 41.2 bits (97), Expect = 7e-05
 Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 26/142 (18%)

Query: 36  VGRGSSGTVY----KG-----AM--INRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           +G+GS G V            AM  +N+Q  V  N +  V  E         +++    H
Sbjct: 23  IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKEL--------QIMQGLEH 74

Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH 142
             LV L  YS +  + + +V + +  G L   L           +  I  ++   + YL 
Sbjct: 75  PFLVNLW-YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC-ELVMALDYLQ 132

Query: 143 DECETQIIHCDIKPQNILMDEN 164
                +IIH D+KP NIL+DE+
Sbjct: 133 ---NQRIIHRDMKPDNILLDEH 151

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 28/147 (19%)

Query: 32  FKEKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT--EIKVIGR-THHRNLV 87
             +K+G+G+ G V+K       ++VAV ++           +T  EI ++   + H N+V
Sbjct: 13  LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIV 72

Query: 88  RLLGYSLEVSKK--ILVYEYMSNGSLAD--------ILFNAEKQPNWIERTGIARDIARG 137
            LL      + +   LV++YM      D        IL    KQ        +   + + 
Sbjct: 73  NLLNVLRADNDRDVYLVFDYME----TDLHAVIRANILEPVHKQY-------VVYQLIKV 121

Query: 138 ILYLHDECETQIIHCDIKPQNILMDEN 164
           I YLH      ++H D+KP NIL++  
Sbjct: 122 IKYLHS---GGLLHRDMKPSNILLNAE 145

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 8/141 (5%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRLLG 91
            K+G GS G +Y G  +   + VA+ +LE V   +  +   E K+         +  +  
Sbjct: 15  RKIGSGSFGDIYLGTDIAAGEEVAI-KLECV-KTKHPQLHIESKIYKMMQGGVGIPTIRW 72

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              E    ++V E +   SL D+     ++ +      +A  +   I Y+H       IH
Sbjct: 73  CGAEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIH 128

Query: 152 CDIKPQNILMDENRCAKNFRL 172
            D+KP N LM   +      +
Sbjct: 129 RDVKPDNFLMGLGKKGNLVYI 149

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 25/142 (17%)

Query: 36  VGRGSSGTVY----KGAMINRQLVAVNRLEK--VLDEREREF-QTEIKVIGR-THHRNLV 87
           +GRGS   V     K      ++ A+  ++K  V D+ + ++ QTE  V  + ++H  LV
Sbjct: 17  IGRGSYAKVLLVRLKK---TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 73

Query: 88  RLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR----DIARGILYLH 142
            L     +   ++  V EY++ G   D++F+ ++Q    E    AR    +I+  + YLH
Sbjct: 74  GLH-SCFQTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEH--ARFYSAEISLALNYLH 127

Query: 143 DECETQIIHCDIKPQNILMDEN 164
              E  II+ D+K  N+L+D  
Sbjct: 128 ---ERGIIYRDLKLDNVLLDSE 146

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 38.4 bits (90), Expect = 6e-04
 Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 25/142 (17%)

Query: 36  VGRGSSGTVY----KGAMINRQLVAVNRLEK--VLDEREREF-QTEIKVIGR-THHRNLV 87
           +G+GS G V     K         AV  L+K  +L ++E +   +E  V+ +   H  LV
Sbjct: 46  IGKGSFGKVLLARHKA---EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLV 102

Query: 88  RLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR----DIARGILYLH 142
            L  +S + + K+  V +Y++ G   ++ ++ +++  ++E    AR    +IA  + YLH
Sbjct: 103 GLH-FSFQTADKLYFVLDYINGG---ELFYHLQRERCFLEPR--ARFYAAEIASALGYLH 156

Query: 143 DECETQIIHCDIKPQNILMDEN 164
                 I++ D+KP+NIL+D  
Sbjct: 157 ---SLNIVYRDLKPENILLDSQ 175

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	183
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.98
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.97
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.96
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.96
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.96
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.96
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.96
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.96
3niz_A	311	Rhodanese family protein; structural genomics, str	99.96
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.96
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.96
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.96
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.96
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.96
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.96
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.96
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.96
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.96
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.96
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.96
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.96
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.96
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.96
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.96
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.96
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.96
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.96
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.96
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.96
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.96
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.96
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.96
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.96
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.96
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.96
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.96
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.96
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.95
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.95
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.95
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.95
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.95
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.95
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.95
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.95
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.95
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.95
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.95
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.95
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.95
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.95
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.95
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.95
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.95
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.95
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.95
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.95
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.95
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.95
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.95
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.95
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.95
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.95
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.95
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.95
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.95
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.95
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.95
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.95
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.95
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.95
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.95
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.95
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.95
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.95
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.95
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.95
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.95
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.95
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.95
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.95
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.95
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.95
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.95
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.95
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.95
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.95
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.95
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.95
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.95
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.95
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.95
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.95
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.95
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.95
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.95
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.95
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.95
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.95
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.95
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.95
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.95
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.95
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.95
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.95
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.95
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.95
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.95
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.94
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.94
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.94
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.94
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.94
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.94
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.94
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.94
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.94
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.94
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.94
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.94
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.94
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.94
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.94
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.94
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.94
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.94
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.94
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.94
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.94
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.94
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.94
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.94
3uqc_A	286	Probable conserved transmembrane protein; structur	99.94
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.94
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.94
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.94
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.94
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.94
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.94
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.94
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.94
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.94
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.94
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.94
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.94
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.94
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.94
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.94
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.94
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.94
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.94
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.94
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.94
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.94
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.94
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.94
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.94
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.94
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.94
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.94
3bhy_A	283	Death-associated protein kinase 3; death associate	99.94
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.94
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.94
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.94
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.94
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.94
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.94
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.94
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.94
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.94
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.94
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.94
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.94
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.94
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.94
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.94
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.94
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.94
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.94
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.94
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.94
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.94
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.94
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.93
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.93
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.93
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.93
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.93
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.93
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.93
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.93
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.93
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.93
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.93
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.93
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.93
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.93
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.93
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.93
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.93
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.93
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.93
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.93
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.93
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.93
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.93
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.93
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.92
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.92
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.92
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.92
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.92
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.92
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.92
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.92
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.92
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.92
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.92
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.92
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.92
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.92
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.92
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.91
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.91
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.91
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.91
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.91
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.91
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.91
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.91
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.9
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.87
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.86
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.73
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.5
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.3
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.28
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.91
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.79
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.71
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.71
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.48
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.46
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.37
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.18
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.17
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.84
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.78
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.51
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.51
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.27
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.06
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	96.94
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	94.98
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	94.5
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	94.17
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	93.07
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	92.38
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	91.58
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	90.19
3mes_A	424	Choline kinase; malaria, structural genomics, stru	88.49

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=6.7e-37  Score=233.62  Aligned_cols=148  Identities=20%  Similarity=0.206  Sum_probs=125.8

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .|.+.+.||+|+||.||+|... +++.||+|.+.+.  .......+.+|+.+++.++||||+++++++.+.+.+||||||
T Consensus        25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy  104 (350)
T 4b9d_A           25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY  104 (350)
T ss_dssp             CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            4677789999999999999976 5889999998653  233456789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |+||+|.+++.... ..+++..+..++.|++.||.|+|++   +|+||||||+|||++.++.+||+|||+|+...
T Consensus       105 ~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  176 (350)
T 4b9d_A          105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLN  176 (350)
T ss_dssp             CTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred             CCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence            99999999997543 3467788888999999999999998   99999999999999999999999999999764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=6.2e-37  Score=230.16  Aligned_cols=147  Identities=27%  Similarity=0.443  Sum_probs=129.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      .+.+.+.||+|+||.||+|...      ++..||+|.++.......+.+.+|+.+|++++||||+++++++.+.+..++|
T Consensus        14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV   93 (299)
T 4asz_A           14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV   93 (299)
T ss_dssp             GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            3556789999999999999864      3678999999876555667899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcC------------CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccc
Q 048219          103 YEYMSNGSLADILFNA------------EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNF  170 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~  170 (183)
                      |||+++|+|.+++...            ...+++..+..++.|++.||.|||++   +|+||||||+|||++.++.+||+
T Consensus        94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~  170 (299)
T 4asz_A           94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIG  170 (299)
T ss_dssp             EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEEC
Confidence            9999999999999653            24578889999999999999999998   99999999999999999999999


Q ss_pred             ceeccccc
Q 048219          171 RLWIGKVD  178 (183)
Q Consensus       171 dfg~a~~~  178 (183)
                      |||+|+..
T Consensus       171 DFGla~~~  178 (299)
T 4asz_A          171 DFGMSRDV  178 (299)
T ss_dssp             CCSCHHHH
T ss_pred             Ccccceec
Confidence            99999854

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=4.7e-37  Score=234.16  Aligned_cols=144  Identities=23%  Similarity=0.315  Sum_probs=129.4

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      |.+.+.||+|+||.||+|... +++.||+|.+..........+.+|+.+|+.++||||++++++|.+.+.+|||||||++
T Consensus        76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g  155 (346)
T 4fih_A           76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG  155 (346)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence            555678999999999999976 5889999998754433445678999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+|.+++..  ..+++..+..++.|++.||.|||++   +|+||||||+|||++.++.+||+|||+|+..
T Consensus       156 g~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~  220 (346)
T 4fih_A          156 GALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV  220 (346)
T ss_dssp             EEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceec
Confidence            999998865  3578888899999999999999998   9999999999999999999999999999865

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.7e-36  Score=228.04  Aligned_cols=146  Identities=25%  Similarity=0.254  Sum_probs=131.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||+|... +++.+|+|.+.+...   .....+.+|+.+|+.++||||+++++++++.+.+|+|||
T Consensus        33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmE  112 (311)
T 4aw0_A           33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS  112 (311)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            3778889999999999999976 588999999976432   224568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++||+|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+|||++.++.+||+|||+|+..
T Consensus       113 y~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~  182 (311)
T 4aw0_A          113 YAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL  182 (311)
T ss_dssp             CCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             cCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceec
Confidence            99999999999764 3577888888999999999999998   9999999999999999999999999999865

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.1e-36  Score=229.10  Aligned_cols=145  Identities=24%  Similarity=0.399  Sum_probs=125.4

Q ss_pred             chhcccCcCcCceEEEEEEc------CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           31 GFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+.+.||+|+||.||+|...      ++..||+|.+........+.+.+|+.+|.+++||||+++++++.+.+..++|||
T Consensus        44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E  123 (329)
T 4aoj_A           44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE  123 (329)
T ss_dssp             EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            44578999999999999864      367899999987655666789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCC--------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccc
Q 048219          105 YMSNGSLADILFNAE--------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNF  170 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~  170 (183)
                      |+++|+|.+++....              ..+++..+..++.|++.||.|||++   +|+||||||+|||++.++.+||+
T Consensus       124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~  200 (329)
T 4aoj_A          124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIG  200 (329)
T ss_dssp             CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEEC
T ss_pred             cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEc
Confidence            999999999986532              2477888899999999999999998   99999999999999999999999


Q ss_pred             ceeccccc
Q 048219          171 RLWIGKVD  178 (183)
Q Consensus       171 dfg~a~~~  178 (183)
                      |||+|+..
T Consensus       201 DFGla~~~  208 (329)
T 4aoj_A          201 DFGMSRDI  208 (329)
T ss_dssp             CCC-----
T ss_pred             ccccceec
Confidence            99999854

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.4e-36  Score=235.48  Aligned_cols=144  Identities=23%  Similarity=0.317  Sum_probs=129.4

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      |.+.+.||+|+||.||+|... +++.||+|.+..........+.+|+.+|+.++||||++++++|.+.+.+|||||||+|
T Consensus       153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g  232 (423)
T 4fie_A          153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG  232 (423)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence            556678999999999999976 5889999998654333445688999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+|.+++...  .+++..+..++.|++.||.|||++   +|+||||||+|||++.++.+||+|||+|+..
T Consensus       233 G~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~  297 (423)
T 4fie_A          233 GALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV  297 (423)
T ss_dssp             EEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEEC
T ss_pred             CcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceEC
Confidence            9999998653  478888899999999999999998   9999999999999999999999999999865

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=7.8e-36  Score=224.55  Aligned_cols=144  Identities=32%  Similarity=0.451  Sum_probs=125.0

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      ..+.+.||+|+||.||+|....  .+|+|.++..  .......+.+|+.++++++||||+++++++. .+..++||||++
T Consensus        38 l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~  114 (307)
T 3omv_A           38 VMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCE  114 (307)
T ss_dssp             CCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCS
T ss_pred             eEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCC
Confidence            3466789999999999998654  5888887632  2345567999999999999999999999874 567899999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +|+|.+++......+++..+..++.|++.||.|||++   +|+||||||+|||+++++.+||+|||+|+...
T Consensus       115 gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~  183 (307)
T 3omv_A          115 GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS  183 (307)
T ss_dssp             SCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence            9999999977666788999999999999999999998   99999999999999999999999999998653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.1e-35  Score=224.22  Aligned_cols=147  Identities=26%  Similarity=0.378  Sum_probs=127.4

Q ss_pred             HhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      ...+.+.||+|+||.||+|...      .+..||+|.+.... ......+.+|+.++.+++||||+++++++.+.+..++
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  106 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM  106 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence            3567789999999999999853      35789999986532 2334678999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc
Q 048219          102 VYEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC  166 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~  166 (183)
                      ||||+++|+|.+++....               ..+++..+..++.|++.||.|||++   +|+||||||+|||+++++.
T Consensus       107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred             EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence            999999999999996431               3477888899999999999999998   9999999999999999999


Q ss_pred             ccccceeccccc
Q 048219          167 AKNFRLWIGKVD  178 (183)
Q Consensus       167 ~~i~dfg~a~~~  178 (183)
                      +||+|||+|+..
T Consensus       184 ~Ki~DFGlar~~  195 (308)
T 4gt4_A          184 VKISDLGLFREV  195 (308)
T ss_dssp             EEECCSCCBCGG
T ss_pred             EEECCcccceec
Confidence            999999999854

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=3.5e-35  Score=219.50  Aligned_cols=147  Identities=28%  Similarity=0.354  Sum_probs=124.8

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEe----CCeEEEEE
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLE----VSKKILVY  103 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~  103 (183)
                      .+.+.||+|+||.||+|.+. ++..||+|.+...  .......+.+|+.+++.++||||++++++|.+    ...+++||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            45668999999999999976 4788999998643  23345678999999999999999999999875    34589999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC-CCcccccceecccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE-NRCAKNFRLWIGKVDE  179 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~-~~~~~i~dfg~a~~~~  179 (183)
                      ||+++|+|.+++... ..+++..+..++.|++.||.|||++ ..+|+||||||+|||++. ++.+||+|||+|++..
T Consensus       109 Ey~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~  183 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             eCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence            999999999999754 4577888888999999999999997 113999999999999984 7899999999998654

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=4.8e-35  Score=217.12  Aligned_cols=146  Identities=23%  Similarity=0.322  Sum_probs=123.3

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||+|... +++.+|+|.+.+...   .....+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus        14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE   93 (275)
T 3hyh_A           14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE   93 (275)
T ss_dssp             CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence            4778889999999999999965 588999999865422   224568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |+ +|+|.+.+... ..+++..+..++.|++.||.|+|++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus        94 y~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~  163 (275)
T 3hyh_A           94 YA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT  163 (275)
T ss_dssp             CC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred             CC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence            99 67999988764 4578888889999999999999998   99999999999999999999999999998653

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=6.4e-35  Score=219.35  Aligned_cols=147  Identities=19%  Similarity=0.236  Sum_probs=120.6

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC----------
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS----------   97 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----------   97 (183)
                      |.+.+.||+|+||.||+|... ++..+|+|.+.... ......+.+|+.+|+.++||||++++++|.+.+          
T Consensus         7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~   86 (299)
T 4g31_A            7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP   86 (299)
T ss_dssp             EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred             CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence            567789999999999999976 57899999986543 233467889999999999999999999997654          


Q ss_pred             --eEEEEEeccCCCCHHHHHhcCCC--CCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccccee
Q 048219           98 --KKILVYEYMSNGSLADILFNAEK--QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLW  173 (183)
Q Consensus        98 --~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg  173 (183)
                        .+|++||||++++|.+++.....  ...+..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||
T Consensus        87 ~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DFG  163 (299)
T 4g31_A           87 KVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFG  163 (299)
T ss_dssp             CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred             CcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccCc
Confidence              36899999999999999975432  233455677899999999999998   99999999999999999999999999


Q ss_pred             cccccc
Q 048219          174 IGKVDE  179 (183)
Q Consensus       174 ~a~~~~  179 (183)
                      +|+..+
T Consensus       164 la~~~~  169 (299)
T 4g31_A          164 LVTAMD  169 (299)
T ss_dssp             CC----
T ss_pred             cceecC
Confidence            998653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3.9e-35  Score=222.92  Aligned_cols=140  Identities=21%  Similarity=0.180  Sum_probs=123.9

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      +.+.+.||+|+||.||+|.+. ++..||+|.+....     ...+|+.+++.++||||+++++++.+.+.+||||||++|
T Consensus        60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g  134 (336)
T 4g3f_A           60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG  134 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence            445568999999999999976 57899999986532     124699999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC-cccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR-CAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~-~~~i~dfg~a~~~  178 (183)
                      |+|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+|||++.++ .+||+|||+|+..
T Consensus       135 g~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~  201 (336)
T 4g3f_A          135 GSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL  201 (336)
T ss_dssp             CBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred             CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence            9999999764 3578888889999999999999998   999999999999999887 6999999999865

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.5e-35  Score=222.65  Aligned_cols=146  Identities=25%  Similarity=0.241  Sum_probs=123.0

Q ss_pred             HhchhcccCcCcCceEEEEEEc----CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      .|.+.+.||+|+||.||+|+..    .++.+|+|.+.+..  ......+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus        25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv  104 (304)
T 3ubd_A           25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI  104 (304)
T ss_dssp             GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred             ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            4778899999999999999863    35789999986432  11223577899999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |||++||+|.+++... ..+++..+..++.|++.||.|+|++   +|+||||||+|||++.++.+||+|||+|+..
T Consensus       105 mEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~  176 (304)
T 3ubd_A          105 LDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES  176 (304)
T ss_dssp             ECCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred             EEcCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence            9999999999999764 3577888888999999999999998   9999999999999999999999999999854

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=8.6e-34  Score=213.74  Aligned_cols=146  Identities=25%  Similarity=0.275  Sum_probs=120.8

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC----eEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS----KKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||+|.+ ++..||+|.+...... ......|+..+..++||||+++++++...+    ..++||||
T Consensus         5 i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey   82 (303)
T 3hmm_A            5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence            45668899999999999987 5778999998754322 122334666667889999999999997654    57999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCC-----CCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC-----ETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-----~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++|+|.+++...  .+++..+..++.|++.||.|+|++.     ..+|+||||||+|||++.++.+||+|||+|+...
T Consensus        83 ~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~  159 (303)
T 3hmm_A           83 HEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  159 (303)
T ss_dssp             CTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred             CCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence            9999999999753  4778888889999999999999741     2389999999999999999999999999998654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2.1e-34  Score=220.80  Aligned_cols=153  Identities=22%  Similarity=0.313  Sum_probs=129.2

Q ss_pred             HHHHHHHhchhcccCcCcCceEEEEEEcC------CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCC-CceeeeeceEE
Q 048219           23 AELKKITDGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHH-RNLVRLLGYSL   94 (183)
Q Consensus        23 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~   94 (183)
                      +++....+.+.+.||+|+||.||+|....      .+.||+|.+.... ......+.+|+.+|.++.| |||++++++|.
T Consensus        59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~  138 (353)
T 4ase_A           59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT  138 (353)
T ss_dssp             HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence            34455567778899999999999998543      3579999987543 3345678999999999976 89999999987


Q ss_pred             eC-CeEEEEEeccCCCCHHHHHhcC---------------CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCC
Q 048219           95 EV-SKKILVYEYMSNGSLADILFNA---------------EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQN  158 (183)
Q Consensus        95 ~~-~~~~lv~e~~~~~~l~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~n  158 (183)
                      .+ +.+++|||||++|+|.+++...               ...+++..+..++.|++.||.|||++   +|+||||||+|
T Consensus       139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~N  215 (353)
T 4ase_A          139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN  215 (353)
T ss_dssp             CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccc
Confidence            64 5689999999999999999643               13367888888999999999999998   99999999999


Q ss_pred             EEecCCCcccccceeccccc
Q 048219          159 ILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       159 il~~~~~~~~i~dfg~a~~~  178 (183)
                      ||+++++.+||+|||+|+..
T Consensus       216 ILl~~~~~vKi~DFGlar~~  235 (353)
T 4ase_A          216 ILLSEKNVVKICDFGLARDI  235 (353)
T ss_dssp             EEECGGGCEEECCCGGGSCT
T ss_pred             eeeCCCCCEEECcchhhhhc
Confidence            99999999999999999865

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-32  Score=213.40  Aligned_cols=144  Identities=22%  Similarity=0.325  Sum_probs=125.4

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEe------CCeEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLE------VSKKI  100 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~~  100 (183)
                      |.+.+.||+|+||.||+|... +++.||+|.+.+..  ......+.+|+.+|+.++||||+++++++..      .+.+|
T Consensus        56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~  135 (398)
T 4b99_A           56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY  135 (398)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred             eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence            666789999999999999976 58899999986532  3345678899999999999999999998764      35789


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +||||++ |+|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+|||++.++.+||+|||+|+..
T Consensus       136 ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~  208 (398)
T 4b99_A          136 VVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL  208 (398)
T ss_dssp             EEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred             EEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeec
Confidence            9999996 6899988653 4678888899999999999999998   9999999999999999999999999999865

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.8e-32  Score=222.08  Aligned_cols=148  Identities=20%  Similarity=0.311  Sum_probs=132.3

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .|.+.+.||+|+||.||+|... +++.+|+|.+..........+.+|+.+|+.++||||++++++|.+.+.++++|||++
T Consensus       158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~  237 (573)
T 3uto_A          158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS  237 (573)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecC
Confidence            3667789999999999999976 588999999876555556678899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC--Ccccccceecccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN--RCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~--~~~~i~dfg~a~~~~  179 (183)
                      ||+|.+++......+++..+..++.|++.||.|||++   +|+||||||+||+++.+  +.+||+|||+|+...
T Consensus       238 gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~  308 (573)
T 3uto_A          238 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD  308 (573)
T ss_dssp             CCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred             CCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence            9999999976555678888889999999999999998   99999999999999854  789999999998653

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.6e-32  Score=211.14  Aligned_cols=141  Identities=16%  Similarity=0.254  Sum_probs=123.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc----CCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .|.+.+.||+|+||.||+|..+    .++.||+|.+.+..  ...++.+|+.++..+ +||||+++++++.+.+++++||
T Consensus        22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm   99 (361)
T 4f9c_A           22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM   99 (361)
T ss_dssp             TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred             cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence            3677789999999999999854    36789999886542  234577899999988 6999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC-Ccccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN-RCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~-~~~~i~dfg~a~~~  178 (183)
                      ||+++++|.+.+.    .+++..+..++.|++.||.|||++   +|+||||||+|||++.+ +.+||+|||+|+..
T Consensus       100 E~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~  168 (361)
T 4f9c_A          100 PYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT  168 (361)
T ss_dssp             ECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             eCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence            9999999999883    477888889999999999999998   99999999999999877 79999999999854

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.98  E-value=8.6e-32  Score=219.10  Aligned_cols=146  Identities=20%  Similarity=0.177  Sum_probs=124.1

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH---HHHHHHH---HHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE---REREFQT---EIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~---~~~~~~~---e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      +.+.+.||+|+||.||+|... +++.+|+|.+.+....   ....+.+   ++.++..++||||++++++|.+.+.+|+|
T Consensus       191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylV  270 (689)
T 3v5w_A          191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI  270 (689)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred             eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEE
Confidence            445578999999999999976 5889999998754211   1122333   45667778999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |||++||+|.+.+... ..+++..+..++.||+.||.|||++   +|+||||||+|||++.+|.+||+|||+|+...
T Consensus       271 mEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~  343 (689)
T 3v5w_A          271 LDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS  343 (689)
T ss_dssp             ECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecC
Confidence            9999999999999764 3577888888999999999999998   99999999999999999999999999998653

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.97  E-value=1.3e-29  Score=191.07  Aligned_cols=147  Identities=27%  Similarity=0.447  Sum_probs=133.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+..........+.+|+.++..++||||+++++++.+.+..+++||+++
T Consensus        11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~   90 (310)
T 3s95_A           11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIK   90 (310)
T ss_dssp             GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecC
Confidence            4566789999999999999976 478899998876655666788999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+++......+++.....++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        91 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  158 (310)
T 3s95_A           91 GGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLM  158 (310)
T ss_dssp             TCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEEC
T ss_pred             CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceec
Confidence            9999999987666788888899999999999999998   9999999999999999999999999999864

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.96  E-value=3.4e-29  Score=190.63  Aligned_cols=146  Identities=22%  Similarity=0.308  Sum_probs=129.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+.+.  .......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus        16 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~   95 (328)
T 3fe3_A           16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY   95 (328)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             CEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEEC
Confidence            3667789999999999999974 6889999998654  234456788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++.+++... ..+++.....++.|++.||.|||++   +++||||||+||+++.++.+||+|||+|+..
T Consensus        96 ~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  164 (328)
T 3fe3_A           96 ASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF  164 (328)
T ss_dssp             CTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGG
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceec
Confidence            9999999988654 3467788888999999999999998   9999999999999999999999999999754

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.96  E-value=2.6e-29  Score=190.89  Aligned_cols=149  Identities=29%  Similarity=0.453  Sum_probs=130.9

Q ss_pred             HHhchhcccCcCcCceEEEEEEc----CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      ..+.+.+.||+|+||.||+|...    .+..+++|.+.... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            34566688999999999999875    34469999987542 33456788999999999999999999999988899999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |||+++++|.+++......+++..+..++.|++.||.|||+.   +|+|+||||+||+++.++.++|+|||+|+...
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  202 (325)
T 3kul_A          129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE  202 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence            999999999999976656788888999999999999999998   99999999999999999999999999998653

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.96  E-value=2.8e-29  Score=197.65  Aligned_cols=146  Identities=23%  Similarity=0.178  Sum_probs=128.1

Q ss_pred             hchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHH---HHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||+|.... ++.+|+|.+.+.....   ...+.+|..++..++||||+++++++.+.+..++||||
T Consensus        76 y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey  155 (437)
T 4aw2_A           76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDY  155 (437)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEec
Confidence            4556789999999999999775 6789999987532221   12378899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++......+++..+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       156 ~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~  225 (437)
T 4aw2_A          156 YVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKL  225 (437)
T ss_dssp             CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhc
Confidence            999999999977556688888888999999999999998   9999999999999999999999999999754

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.96  E-value=4.1e-29  Score=187.60  Aligned_cols=145  Identities=27%  Similarity=0.361  Sum_probs=129.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+..........+.+|+.+++.++||||+++++++...+..+++|||++
T Consensus        21 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~  100 (297)
T 3fxz_A           21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA  100 (297)
T ss_dssp             TBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             ceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCC
Confidence            4666789999999999999864 578899999865544445678899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+++...  .+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus       101 ~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (297)
T 3fxz_A          101 GGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI  166 (297)
T ss_dssp             TCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceec
Confidence            99999998653  477888888999999999999998   9999999999999999999999999998754

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.96  E-value=4.8e-29  Score=192.83  Aligned_cols=148  Identities=32%  Similarity=0.489  Sum_probs=124.8

Q ss_pred             HhchhcccCcCcCceEEEEEEc----CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+.+.+.||+|+||.||+|...    .+..+++|.+.... ......+.+|+.++..++||||+++++++...+..+++|
T Consensus        46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  125 (373)
T 2qol_A           46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT  125 (373)
T ss_dssp             GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence            4566689999999999999865    46679999987542 334567899999999999999999999999889999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ||+++++|.+++......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+...
T Consensus       126 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  198 (373)
T 2qol_A          126 EYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLE  198 (373)
T ss_dssp             ECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             eCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence            99999999999977666688888889999999999999998   99999999999999999999999999998653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.96  E-value=6e-29  Score=183.87  Aligned_cols=146  Identities=28%  Similarity=0.419  Sum_probs=131.0

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      .+.+.+.||+|+||.||+|...++..+++|.+..... ....+.+|+.+++.++||||+++++++.+.+..+++||++++
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   89 (269)
T 4hcu_A           11 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH   89 (269)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred             hceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence            4667789999999999999988888899999875432 235688899999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|.+++......+++..+..++.|++.|+.|||++   +++|+||||+||+++.++.++|+|||+|+..
T Consensus        90 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  156 (269)
T 4hcu_A           90 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFV  156 (269)
T ss_dssp             CBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred             CcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccc
Confidence            999999977666678888889999999999999998   9999999999999999999999999999854

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.96  E-value=8.7e-29  Score=186.95  Aligned_cols=147  Identities=25%  Similarity=0.342  Sum_probs=127.5

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhH--HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .|.+.+.||+|+||.||+|...++..+++|.+......  ....+.+|+.+++.++||||+++++++.+....+++||++
T Consensus        22 ~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~  101 (311)
T 3niz_A           22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM  101 (311)
T ss_dssp             EEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECC
T ss_pred             hhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCC
Confidence            46667899999999999999988899999998643221  2356788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++ ++.+.+......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+...
T Consensus       102 ~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  170 (311)
T 3niz_A          102 EK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG  170 (311)
T ss_dssp             SE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred             CC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence            75 88888876666678888888999999999999998   99999999999999999999999999998653

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.96  E-value=1.1e-28  Score=188.42  Aligned_cols=146  Identities=21%  Similarity=0.200  Sum_probs=128.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+.+.+.||+|+||.||+|... +++.+++|.+.+...   .....+..|+.+++.++||||+++++++.+.+..+++||
T Consensus         6 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E   85 (337)
T 1o6l_A            6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME   85 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             HeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEe
Confidence            3566789999999999999976 578899999875421   224567889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+++++|...+... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus        86 ~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  155 (337)
T 1o6l_A           86 YANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             CCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence            99999999988653 3567788888999999999999998   9999999999999999999999999999853

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.96  E-value=3e-29  Score=187.78  Aligned_cols=149  Identities=27%  Similarity=0.415  Sum_probs=130.0

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc-----CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEe--CCeE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI-----NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE--VSKK   99 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~   99 (183)
                      ...+.+.+.||+|+||.||+|...     .+..+++|.+..........+.+|+.++..++||||+++++++..  ....
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            345777889999999999999842     478899999877655666778999999999999999999999864  4568


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++||++++++|.+++......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~  164 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL  164 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred             EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence            999999999999999977655578888889999999999999998   9999999999999999999999999999865

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.96  E-value=9.6e-29  Score=193.31  Aligned_cols=146  Identities=22%  Similarity=0.134  Sum_probs=128.0

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHH---HHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||++... +++.+|+|.+.+.....   ...+.+|..++..+.|++|+++++++.+.+..++||||
T Consensus        63 f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~  142 (412)
T 2vd5_A           63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEY  142 (412)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcC
Confidence            445578999999999999976 58899999987542211   23477899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++......+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       143 ~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~  212 (412)
T 2vd5_A          143 YVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKL  212 (412)
T ss_dssp             CCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheec
Confidence            999999999976555677888888999999999999998   9999999999999999999999999999754

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.96  E-value=1.9e-28  Score=189.30  Aligned_cols=147  Identities=23%  Similarity=0.367  Sum_probs=126.8

Q ss_pred             HhchhcccCcCcCceEEEEEEc--------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI--------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSK   98 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~--------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   98 (183)
                      .+.+.+.||+|+||.||+|...        .+..+++|.+.... ......+.+|+.+++.+ +||||+++++++...+.
T Consensus        82 ~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~  161 (370)
T 2psq_A           82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP  161 (370)
T ss_dssp             GEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSS
T ss_pred             HCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCC
Confidence            4556678999999999999853        24569999987543 33456788999999999 89999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC
Q 048219           99 KILVYEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE  163 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~  163 (183)
                      .++||||+++++|.+++....               ..+++..+..++.|++.||.|||++   +|+||||||+||+++.
T Consensus       162 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~  238 (370)
T 2psq_A          162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTE  238 (370)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred             EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECC
Confidence            999999999999999997543               2367778888999999999999998   9999999999999999


Q ss_pred             CCcccccceeccccc
Q 048219          164 NRCAKNFRLWIGKVD  178 (183)
Q Consensus       164 ~~~~~i~dfg~a~~~  178 (183)
                      ++.+||+|||+|+..
T Consensus       239 ~~~~kl~DFG~a~~~  253 (370)
T 2psq_A          239 NNVMKIADFGLARDI  253 (370)
T ss_dssp             TCCEEECCCSSCEET
T ss_pred             CCCEEEccccCCccc
Confidence            999999999999844

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.96  E-value=7.8e-29  Score=190.38  Aligned_cols=148  Identities=23%  Similarity=0.268  Sum_probs=128.3

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l  101 (183)
                      ...+.+.+.||+|+||.||+|... +++.+|+|.+.+...   .....+..|..++..+ +||||+++++++.+.+..++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            345677789999999999999976 478899999876421   2235577899999887 69999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||||+++++|...+... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       102 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~  174 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG  174 (353)
T ss_dssp             EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence            99999999999988654 3477888888999999999999998   9999999999999999999999999999863

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.96  E-value=1.8e-28  Score=190.47  Aligned_cols=148  Identities=20%  Similarity=0.316  Sum_probs=130.9

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+..........+.+|+.++..++||||+++++++.+....+++|||++
T Consensus        52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  131 (387)
T 1kob_A           52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS  131 (387)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence            4667789999999999999976 578899999876555555678899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC--CCcccccceecccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE--NRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~--~~~~~i~dfg~a~~~~  179 (183)
                      +++|.+.+......+++..+..++.|++.||.|||++   +++|+||||+||+++.  .+.+||+|||+|+...
T Consensus       132 gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~  202 (387)
T 1kob_A          132 GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN  202 (387)
T ss_dssp             CCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred             CCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence            9999999876555678888899999999999999998   9999999999999974  4679999999998653

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=3.2e-28  Score=184.72  Aligned_cols=146  Identities=18%  Similarity=0.269  Sum_probs=129.2

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+.... .....+.+|+.+++.++||||+++++++.+.+..+++||+++
T Consensus         6 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~   84 (321)
T 1tki_A            6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS   84 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             ceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence            3567788999999999999976 47788999886442 344567899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC--CCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE--NRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~--~~~~~i~dfg~a~~~  178 (183)
                      +++|.+.+......+++..+..++.|++.||.|||++   +++|+||||+||+++.  ++.+||+|||+|+..
T Consensus        85 g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~  154 (321)
T 1tki_A           85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL  154 (321)
T ss_dssp             CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence            9999999976555678888899999999999999998   9999999999999987  789999999999865

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.96  E-value=4.5e-29  Score=193.17  Aligned_cols=148  Identities=24%  Similarity=0.376  Sum_probs=130.0

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      ..+.+.+.||+|+||.||+|... ++..+++|.+.... ......+.+|+.+++.++||||+++++++...+..++|||+
T Consensus       114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  193 (377)
T 3cbl_A          114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL  193 (377)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence            34556688999999999999986 67889999987543 23345678899999999999999999999988899999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++......+++.....++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus       194 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~  263 (377)
T 3cbl_A          194 VQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREE  263 (377)
T ss_dssp             CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceec
Confidence            999999999976555577888888999999999999998   9999999999999999999999999999753

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.96  E-value=1.1e-28  Score=192.92  Aligned_cols=144  Identities=21%  Similarity=0.192  Sum_probs=125.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHH---HHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||+|... +++.+|+|.+.+.....   ...+.+|..++..++||||+++++++.+....++||||
T Consensus        71 y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~  150 (410)
T 3v8s_A           71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEY  150 (410)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence            445578999999999999976 47889999987532211   23477899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++...  .+++.....++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       151 ~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~  218 (410)
T 3v8s_A          151 MPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM  218 (410)
T ss_dssp             CTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence            9999999988653  467888888999999999999998   9999999999999999999999999999754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.96  E-value=2.7e-28  Score=184.92  Aligned_cols=148  Identities=19%  Similarity=0.230  Sum_probs=124.2

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC---------
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS---------   97 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---------   97 (183)
                      .+.+.+.||+|+||.||+|... ++..+|+|.+.... ......+.+|+.+++.++||||+++++++....         
T Consensus         7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~   86 (332)
T 3qd2_B            7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD   86 (332)
T ss_dssp             HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred             cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence            4667789999999999999976 68899999986432 234467889999999999999999999986543         


Q ss_pred             ------------------------------------------------eEEEEEeccCCCCHHHHHhcCCC--CCChHHH
Q 048219           98 ------------------------------------------------KKILVYEYMSNGSLADILFNAEK--QPNWIER  127 (183)
Q Consensus        98 ------------------------------------------------~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~  127 (183)
                                                                      ..+++||++++++|.+++.....  ...+..+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~  166 (332)
T 3qd2_B           87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC  166 (332)
T ss_dssp             C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHH
T ss_pred             hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHH
Confidence                                                            27999999999999999976432  2344456


Q ss_pred             HHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          128 TGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       128 ~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+...
T Consensus       167 ~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  215 (332)
T 3qd2_B          167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD  215 (332)
T ss_dssp             HHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECS
T ss_pred             HHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccc
Confidence            77999999999999998   99999999999999999999999999998653

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.96  E-value=1.1e-28  Score=182.29  Aligned_cols=147  Identities=25%  Similarity=0.329  Sum_probs=131.1

Q ss_pred             HHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      ..+.+.+.||+|+||.||+|...++..+++|.+..... ....+.+|+.++..++||||+++++++...+..+++||+++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (268)
T 3sxs_A            8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS   86 (268)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence            35667789999999999999988888899999875432 23567889999999999999999999998999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+++......+++..+..++.|++.||.|||+.   +++|+||||+||+++.++.++|+|||+|+..
T Consensus        87 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~  154 (268)
T 3sxs_A           87 NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYV  154 (268)
T ss_dssp             TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEEC
T ss_pred             CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceec
Confidence            9999999976555678888899999999999999998   9999999999999999999999999999854

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.96  E-value=2.2e-28  Score=181.95  Aligned_cols=148  Identities=24%  Similarity=0.337  Sum_probs=128.8

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ...+.+.+.||+|+||.||++....+..+++|.+..... ....+.+|+.++..++|+||+++++++...+..+++||++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            345667789999999999999988888899999875422 2356788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|.+++......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+..
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  170 (283)
T 3gen_A          102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV  170 (283)
T ss_dssp             TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGB
T ss_pred             CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccc
Confidence            99999999976555678888899999999999999998   9999999999999999999999999999854

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.96  E-value=1.6e-28  Score=183.17  Aligned_cols=148  Identities=22%  Similarity=0.296  Sum_probs=130.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-C-------cEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-R-------QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-~-------~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   99 (183)
                      ..+.+.+.||+|+||.||+|.... +       ..+++|.+..........+.+|+.+++.++||||+++++++...+..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            356677899999999999998653 2       46899998766555567789999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc--------ccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC--------AKNFR  171 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~--------~~i~d  171 (183)
                      +++||++++++|.+++......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.        ++|+|
T Consensus        88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D  164 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD  164 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred             EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeecc
Confidence            999999999999999977655578888888999999999999998   9999999999999998876        99999


Q ss_pred             eeccccc
Q 048219          172 LWIGKVD  178 (183)
Q Consensus       172 fg~a~~~  178 (183)
                      ||+|...
T Consensus       165 fg~~~~~  171 (289)
T 4fvq_A          165 PGISITV  171 (289)
T ss_dssp             CCSCTTT
T ss_pred             Ccccccc
Confidence            9999754

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.96  E-value=3.1e-28  Score=184.56  Aligned_cols=146  Identities=23%  Similarity=0.281  Sum_probs=128.2

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+.+.+.||+|+||.||+|... +++.+++|.+.+...   .....+.+|..++..++||||+++++++.+....+++||
T Consensus         7 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e   86 (318)
T 1fot_A            7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD   86 (318)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEe
Confidence            3566789999999999999976 578899999875432   123567789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+++++|.+++... ..+++.....++.|++.||.|||++   +++||||||+||+++.++.+||+|||+|+..
T Consensus        87 ~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~  156 (318)
T 1fot_A           87 YIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV  156 (318)
T ss_dssp             CCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred             CCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceec
Confidence            99999999999764 3467778888999999999999998   9999999999999999999999999999854

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.96  E-value=3.7e-28  Score=182.11  Aligned_cols=147  Identities=28%  Similarity=0.356  Sum_probs=128.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch---hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV---LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      +|.+.+.||+|+||.||+|... .+..+++|.+...   .......+.+|+.++..++||||+++++++...+..+++||
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   91 (294)
T 4eqm_A           12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVME   91 (294)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEe
Confidence            4667789999999999999975 5788999987432   23345678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |+++++|.+++... ..+++.....++.|++.||.|+|++   +++|+||||+||+++.++.++|+|||+|+...
T Consensus        92 ~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  162 (294)
T 4eqm_A           92 YIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS  162 (294)
T ss_dssp             CCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred             CCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence            99999999998654 3567888888999999999999998   99999999999999999999999999998653

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.96  E-value=5.6e-28  Score=185.09  Aligned_cols=146  Identities=25%  Similarity=0.261  Sum_probs=127.6

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+.+.+.||+|+||.||+|... +++.+++|.+.+..   ......+..|..++..+ +||||+++++++.+.+..+++|
T Consensus        10 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~   89 (345)
T 3a8x_A           10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI   89 (345)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEE
Confidence            3566789999999999999976 47889999987542   23345678899999887 8999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||+++++|.+.+... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus        90 e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~  160 (345)
T 3a8x_A           90 EYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  160 (345)
T ss_dssp             CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred             eCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence            999999999988653 3467888888999999999999998   9999999999999999999999999999853

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.96  E-value=1.6e-28  Score=186.05  Aligned_cols=146  Identities=37%  Similarity=0.558  Sum_probs=129.1

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      +.+.+.||+|+||.||+|...++..+++|.+..........+.+|+.+++.++||||+++++++...+..+++||+++++
T Consensus        41 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  120 (321)
T 2qkw_B           41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENG  120 (321)
T ss_dssp             CSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTC
T ss_pred             cCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCC
Confidence            44556899999999999998788899999887654445567889999999999999999999999999999999999999


Q ss_pred             CHHHHHhcCC---CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          110 SLADILFNAE---KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       110 ~l~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +|.+++....   ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus       121 ~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  189 (321)
T 2qkw_B          121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKG  189 (321)
T ss_dssp             BTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred             cHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence            9999885432   2467888888999999999999998   9999999999999999999999999999753

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.96  E-value=2.2e-28  Score=184.67  Aligned_cols=148  Identities=32%  Similarity=0.459  Sum_probs=124.4

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      ...+.+.+.||+|+||.||+|.. .+..+++|.+....  ......+.+|+.+++.++||||+++++++...+..+++||
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  114 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE  114 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred             hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence            34566778999999999999976 56779999876432  3344678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCC--CCChHHHHHHHHHHHHHHHHhhhCCCCC--ceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEK--QPNWIERTGIARDIARGILYLHDECETQ--IIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~~~--i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+++++|.+++.....  .+++..+..++.|++.||.|||++   +  ++|+||||+||+++.++.+||+|||+|+..
T Consensus       115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~  189 (309)
T 3p86_A          115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK  189 (309)
T ss_dssp             CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred             cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence            9999999999975431  267788888999999999999997   7  999999999999999999999999999754

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.96  E-value=2.2e-28  Score=190.37  Aligned_cols=145  Identities=25%  Similarity=0.244  Sum_probs=125.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+.+.+.||+|+||.||+|... +++.+|+|.+.+...   .....+..|..++..+ +||||+++++++.+.+..++||
T Consensus        53 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~  132 (396)
T 4dc2_A           53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI  132 (396)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             HcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEE
Confidence            4566789999999999999976 477899999876432   2224577888888776 7999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ||+++++|...+... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+.
T Consensus       133 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~  202 (396)
T 4dc2_A          133 EYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  202 (396)
T ss_dssp             ECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence            999999999988654 3577888888999999999999998   999999999999999999999999999986

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.96  E-value=4.2e-28  Score=188.08  Aligned_cols=147  Identities=21%  Similarity=0.231  Sum_probs=129.3

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      ..+.+.+.||+|+||.||++... +++.+|+|.+.+...   .....+.+|+.++..++||||+++++++.+....+++|
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            34667789999999999999976 478899999865431   22356788999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||+++++|...+... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.++|+|||+|+..
T Consensus        95 e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~  165 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML  165 (384)
T ss_dssp             CCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             ecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeec
Confidence            999999999988653 4577888888999999999999998   9999999999999999999999999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.96  E-value=3.2e-28  Score=188.18  Aligned_cols=143  Identities=24%  Similarity=0.344  Sum_probs=122.0

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHH
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA  112 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~  112 (183)
                      +.||+|+||.||+|... ++..+++|.+..........+.+|+.++..++||||+++++++...+..++||||+++++|.
T Consensus        95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~  174 (373)
T 2x4f_A           95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF  174 (373)
T ss_dssp             EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEH
T ss_pred             eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence            56999999999999875 57889999987655455667899999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe--cCCCcccccceecccccc
Q 048219          113 DILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM--DENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       113 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~--~~~~~~~i~dfg~a~~~~  179 (183)
                      +.+......+++..+..++.|++.||.|||+.   +|+|+||||+||++  +.++.+||+|||+|+...
T Consensus       175 ~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~  240 (373)
T 2x4f_A          175 DRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYK  240 (373)
T ss_dssp             HHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence            98876555677888888999999999999998   99999999999999  566789999999998653

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.96  E-value=4.5e-28  Score=183.82  Aligned_cols=155  Identities=21%  Similarity=0.274  Sum_probs=133.2

Q ss_pred             eeCHHHHHHHHh------------chhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCc
Q 048219           19 SFSYAELKKITD------------GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN   85 (183)
Q Consensus        19 ~~~~~~~~~~~~------------~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~   85 (183)
                      .++..+++....            ...+.||+|+||.||+|... ++..+++|.+..........+.+|+.+++.++|+|
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n  103 (321)
T 2c30_A           24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN  103 (321)
T ss_dssp             -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred             cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence            355666655543            33457999999999999976 68899999987544444567889999999999999


Q ss_pred             eeeeeceEEeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC
Q 048219           86 LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR  165 (183)
Q Consensus        86 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~  165 (183)
                      |+++++++...+..+++|||+++++|.+++..  ..+++..+..++.|++.||.|||+.   +++|+||||+||+++.++
T Consensus       104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~  178 (321)
T 2c30_A          104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDG  178 (321)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTC
T ss_pred             cceEEEEEEECCEEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCC
Confidence            99999999999999999999999999998854  4577888889999999999999998   999999999999999999


Q ss_pred             cccccceeccccc
Q 048219          166 CAKNFRLWIGKVD  178 (183)
Q Consensus       166 ~~~i~dfg~a~~~  178 (183)
                      .+||+|||+|+..
T Consensus       179 ~~kl~Dfg~~~~~  191 (321)
T 2c30_A          179 RVKLSDFGFCAQI  191 (321)
T ss_dssp             CEEECCCTTCEEC
T ss_pred             cEEEeeeeeeeec
Confidence            9999999998754

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.96  E-value=2.2e-28  Score=187.36  Aligned_cols=148  Identities=22%  Similarity=0.278  Sum_probs=127.9

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l  101 (183)
                      ...+.+.+.||+|+||.||+|... +++.+|+|.+.+...   .....+..|..++..+ +||||+++++++.+....++
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l   95 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   95 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence            345667789999999999999976 578899999876421   2234577888888876 89999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||||+++++|.+++... ..+++.....++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus        96 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  168 (345)
T 1xjd_A           96 VMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN  168 (345)
T ss_dssp             EEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence            99999999999998653 3467888888999999999999998   9999999999999999999999999999853

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.96  E-value=5.6e-28  Score=185.41  Aligned_cols=146  Identities=21%  Similarity=0.179  Sum_probs=128.0

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||+|... ++..+++|.+.+...   .....+.+|+.+++.++||||+++++++.+....+++|||
T Consensus        43 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  122 (350)
T 1rdq_E           43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY  122 (350)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcC
Confidence            455678999999999999976 578999999865432   1235678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++++|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus       123 ~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~  192 (350)
T 1rdq_E          123 VAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK  192 (350)
T ss_dssp             CTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceecc
Confidence            9999999998754 3467888888999999999999998   99999999999999999999999999998543

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.96  E-value=1e-28  Score=185.24  Aligned_cols=155  Identities=23%  Similarity=0.297  Sum_probs=129.9

Q ss_pred             HHHHHHHHhchhcccCcCcCceEEEEEE-----cCCcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEe
Q 048219           22 YAELKKITDGFKEKVGRGSSGTVYKGAM-----INRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLE   95 (183)
Q Consensus        22 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~-----~~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   95 (183)
                      ...+....+.+.+.||+|+||.||+|..     ..+..+++|.+..... .....+.+|+.+++.++|+||+++++++..
T Consensus        15 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   94 (302)
T 4e5w_A           15 PTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE   94 (302)
T ss_dssp             TTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEec
Confidence            3334445577788999999999999983     3578899999875322 223568899999999999999999999986


Q ss_pred             C--CeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccccee
Q 048219           96 V--SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLW  173 (183)
Q Consensus        96 ~--~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg  173 (183)
                      .  ...+++||++++++|.+++......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||
T Consensus        95 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg  171 (302)
T 4e5w_A           95 DGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFG  171 (302)
T ss_dssp             ---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCT
T ss_pred             CCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccc
Confidence            6  668999999999999999966556678888899999999999999998   99999999999999999999999999


Q ss_pred             cccccc
Q 048219          174 IGKVDE  179 (183)
Q Consensus       174 ~a~~~~  179 (183)
                      +|+...
T Consensus       172 ~~~~~~  177 (302)
T 4e5w_A          172 LTKAIE  177 (302)
T ss_dssp             TCEECC
T ss_pred             cccccc
Confidence            998653

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.96  E-value=4.7e-28  Score=185.82  Aligned_cols=150  Identities=19%  Similarity=0.201  Sum_probs=128.0

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH-----HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE-----REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (183)
                      ...|.+.+.||+|+||.||+|... +++.+++|.+......     ....+.+|+.+++.++||||+++++++.+.+..+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            346788899999999999999876 5788999998643211     2456889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcC---CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc---ccccceec
Q 048219          101 LVYEYMSNGSLADILFNA---EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC---AKNFRLWI  174 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~---~~i~dfg~  174 (183)
                      ++|||+++++|.+.+...   ...+++..+..++.|++.||.|||++   +|+|+||||+||+++.++.   +||+|||+
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            999999999998877542   23467888888999999999999998   9999999999999987654   99999999


Q ss_pred             ccccc
Q 048219          175 GKVDE  179 (183)
Q Consensus       175 a~~~~  179 (183)
                      |+...
T Consensus       180 a~~~~  184 (351)
T 3c0i_A          180 AIQLG  184 (351)
T ss_dssp             CEECC
T ss_pred             eeEec
Confidence            97653

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.96  E-value=1.8e-28  Score=183.15  Aligned_cols=145  Identities=23%  Similarity=0.342  Sum_probs=127.5

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      |.+.+.||+|+||.||+|....++.+++|.+.....  .....+.+|+.+++.++||||+++++++.+.+..+++||+++
T Consensus         4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   83 (288)
T 1ob3_A            4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD   83 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC
Confidence            566788999999999999987788999998864321  123567789999999999999999999999999999999997


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      + ++.+.+......+++.....++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  150 (288)
T 1ob3_A           84 Q-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF  150 (288)
T ss_dssp             E-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHH
T ss_pred             C-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcccccc
Confidence            5 89988876656678888888999999999999998   9999999999999999999999999999754

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.95  E-value=7e-28  Score=180.18  Aligned_cols=146  Identities=23%  Similarity=0.314  Sum_probs=126.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      |.+.+.||+|+||.||+|... ++..+++|.+....  ......+.+|+.+++.++||||+++++++.+.+..+++||++
T Consensus         4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   83 (292)
T 3o0g_A            4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence            566788999999999999976 47889999886432  223456788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++ ++.+.+......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+...
T Consensus        84 ~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~  152 (292)
T 3o0g_A           84 DQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFG  152 (292)
T ss_dssp             SE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecC
Confidence            75 67666666556688888899999999999999998   99999999999999999999999999998653

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.95  E-value=4.9e-28  Score=186.41  Aligned_cols=146  Identities=23%  Similarity=0.316  Sum_probs=127.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH------HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE------REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+.+....      ....+.+|+.++..++||||+++++++.+.+..++
T Consensus        13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   92 (361)
T 2yab_A           13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL   92 (361)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence            3667789999999999999976 5788999998653221      23568899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC----cccccceecccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR----CAKNFRLWIGKV  177 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~----~~~i~dfg~a~~  177 (183)
                      +||++++++|.+++... ..+++..+..++.|++.||.|||++   +|+|+||||+||+++.++    .+||+|||+|+.
T Consensus        93 v~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~  168 (361)
T 2yab_A           93 ILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (361)
T ss_dssp             EEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred             EEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence            99999999999998653 4577888889999999999999998   999999999999998776    799999999986


Q ss_pred             c
Q 048219          178 D  178 (183)
Q Consensus       178 ~  178 (183)
                      .
T Consensus       169 ~  169 (361)
T 2yab_A          169 I  169 (361)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.95  E-value=4.3e-28  Score=184.35  Aligned_cols=146  Identities=21%  Similarity=0.231  Sum_probs=121.4

Q ss_pred             HHhchhcccCcCcCceEEEEEEc----CCcEEEEEEccchh----hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVL----DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   99 (183)
                      ..+.+.+.||+|+||.||++...    .++.+++|.+.+..    ......+.+|+.+++.++||||+++++++...+..
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            45777789999999999999863    67889999987542    12234577899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      +++|||+++++|.+.+... ..+.+.....++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+.
T Consensus        97 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~  170 (327)
T 3a62_A           97 YLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKE  170 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred             EEEEeCCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence            9999999999999988653 3466777888999999999999998   999999999999999999999999999975

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.95  E-value=4.9e-28  Score=183.78  Aligned_cols=149  Identities=25%  Similarity=0.356  Sum_probs=130.7

Q ss_pred             HHhchhcccCcCcCceEEEEEE-----cCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEE--eCCeEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAM-----INRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL--EVSKKI  100 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~  100 (183)
                      ..+.+.+.||+|+||.||+|..     ..+..+++|.+..........+.+|+.+++.++|+||+++++++.  .....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            4567778999999999999984     257889999987765566677899999999999999999999887  456689


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++||++++++|.+++......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+...
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  178 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP  178 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred             EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecc
Confidence            99999999999999976445578888889999999999999998   99999999999999999999999999998653

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.95  E-value=1.7e-27  Score=187.87  Aligned_cols=148  Identities=18%  Similarity=0.254  Sum_probs=127.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      ..|.+.+.||+|+||.||+|... ++..+++|.+....  ......+.+|+.+++.++||||+++++++.+.+..+++||
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E   90 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD   90 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence            45778889999999999999875 57889999886432  3344568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC---CCcccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE---NRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~---~~~~~i~dfg~a~~~~  179 (183)
                      ++++++|.+.+... ..+++.....++.|++.||.|||++   +|+||||||+||+++.   ++.+||+|||+|+...
T Consensus        91 ~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~  164 (444)
T 3soa_A           91 LVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE  164 (444)
T ss_dssp             CCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred             eCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence            99999999988764 4577888889999999999999998   9999999999999984   5789999999997653

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.95  E-value=1.5e-27  Score=185.07  Aligned_cols=146  Identities=19%  Similarity=0.194  Sum_probs=129.6

Q ss_pred             HhchhcccCcC--cCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           29 TDGFKEKVGRG--SSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g--~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .|.+.+.||+|  +||.||+|... ++..+++|.+....  ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  105 (389)
T 3gni_B           26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT  105 (389)
T ss_dssp             GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEE
Confidence            57778899999  99999999976 58899999986542  334466888999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          104 EYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      |++++++|.+++.... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.++|+|||.+..
T Consensus       106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~  177 (389)
T 3gni_B          106 SFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS  177 (389)
T ss_dssp             ECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             EccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence            9999999999987642 4577888888999999999999998   999999999999999999999999998753

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.95  E-value=1.8e-28  Score=186.01  Aligned_cols=159  Identities=42%  Similarity=0.644  Sum_probs=132.7

Q ss_pred             eCHHHHHHH--HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhH-HHHHHHHHHHHHhhcCCCceeeeeceEEeC
Q 048219           20 FSYAELKKI--TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE-REREFQTEIKVIGRTHHRNLVRLLGYSLEV   96 (183)
Q Consensus        20 ~~~~~~~~~--~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   96 (183)
                      ++..++...  .+.+.+.||+|+||.||+|...++..+++|.+...... ....+.+|+.++..++||||+++++++...
T Consensus        20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   99 (326)
T 3uim_A           20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP   99 (326)
T ss_dssp             CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCS
T ss_pred             ecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecC
Confidence            444544444  45556789999999999998777889999998754322 223578899999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCC---CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccccee
Q 048219           97 SKKILVYEYMSNGSLADILFNAE---KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLW  173 (183)
Q Consensus        97 ~~~~lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg  173 (183)
                      +..+++||++++++|.+++....   ..+++..+..++.|++.||.|||+.+..+++|+||||+||+++.++.++|+|||
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg  179 (326)
T 3uim_A          100 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG  179 (326)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCS
T ss_pred             CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCc
Confidence            99999999999999999997643   237788888999999999999998644589999999999999999999999999


Q ss_pred             ccccc
Q 048219          174 IGKVD  178 (183)
Q Consensus       174 ~a~~~  178 (183)
                      +|+..
T Consensus       180 ~~~~~  184 (326)
T 3uim_A          180 LAKLM  184 (326)
T ss_dssp             SCEEC
T ss_pred             ccccc
Confidence            99865

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.95  E-value=9.6e-28  Score=185.98  Aligned_cols=152  Identities=24%  Similarity=0.341  Sum_probs=130.4

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEc--------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEE
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMI--------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSL   94 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~--------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~   94 (183)
                      +....+.+.+.||+|+||.||+|...        .+..+++|.+.... ......+.+|+.++..+ +||||+++++++.
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~  145 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT  145 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence            33456677789999999999999853        23568999987543 33446788999999999 8999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCE
Q 048219           95 EVSKKILVYEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI  159 (183)
Q Consensus        95 ~~~~~~lv~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~ni  159 (183)
                      ..+..+++||++++++|.+++....               ..+++..+..++.|++.||.|||+.   +++|+||||+||
T Consensus       146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI  222 (382)
T 3tt0_A          146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV  222 (382)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred             cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceE
Confidence            9999999999999999999997643               2477888899999999999999998   999999999999


Q ss_pred             EecCCCcccccceecccccc
Q 048219          160 LMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       160 l~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++.++.+||+|||+|+...
T Consensus       223 ll~~~~~~kL~DFG~a~~~~  242 (382)
T 3tt0_A          223 LVTEDNVMKIADFGLARDIH  242 (382)
T ss_dssp             EECTTCCEEECSCSCCCCSS
T ss_pred             EEcCCCcEEEcccCcccccc
Confidence            99999999999999998553

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.95  E-value=5.1e-28  Score=186.36  Aligned_cols=145  Identities=21%  Similarity=0.191  Sum_probs=122.1

Q ss_pred             HHhchhcccCcCcCceEEEEE------EcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcC---CCceeeeeceEEeCCe
Q 048219           28 ITDGFKEKVGRGSSGTVYKGA------MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH---HRNLVRLLGYSLEVSK   98 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~------~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~   98 (183)
                      ..+.+.+.||+|+||.||+|.      ...++.+++|.+.....   ..+..|+.++..+.   |++++++++++...+.
T Consensus        65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~  141 (365)
T 3e7e_A           65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG  141 (365)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---HHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred             EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---hHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence            345566789999999999994      34578899999876432   34556666666665   8999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhc----CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC-----------
Q 048219           99 KILVYEYMSNGSLADILFN----AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE-----------  163 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~-----------  163 (183)
                      .++||||+++++|.+++..    ....+++..+..++.|++.||.|||+.   +|+||||||+||+++.           
T Consensus       142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~  218 (365)
T 3e7e_A          142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDL  218 (365)
T ss_dssp             EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------
T ss_pred             cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccc
Confidence            9999999999999999964    235578888999999999999999998   9999999999999998           


Q ss_pred             CCcccccceeccccc
Q 048219          164 NRCAKNFRLWIGKVD  178 (183)
Q Consensus       164 ~~~~~i~dfg~a~~~  178 (183)
                      ++.+||+|||+|+..
T Consensus       219 ~~~~kl~DFG~a~~~  233 (365)
T 3e7e_A          219 SAGLALIDLGQSIDM  233 (365)
T ss_dssp             CTTEEECCCTTCEEG
T ss_pred             cCCEEEeeCchhhhh
Confidence            899999999999643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.95  E-value=1.3e-28  Score=188.90  Aligned_cols=152  Identities=23%  Similarity=0.338  Sum_probs=128.1

Q ss_pred             HHHHHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEe
Q 048219           24 ELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLE   95 (183)
Q Consensus        24 ~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   95 (183)
                      ++....+.+.+.||+|+||.||+|.+.      +++.+++|.+.... ......+.+|+.++..+ .||||+++++++..
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~   97 (359)
T 3vhe_A           18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK   97 (359)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeec
Confidence            344456777889999999999999742      35789999987543 33446788999999999 78999999999987


Q ss_pred             CC-eEEEEEeccCCCCHHHHHhcCCC------------------------------------------------------
Q 048219           96 VS-KKILVYEYMSNGSLADILFNAEK------------------------------------------------------  120 (183)
Q Consensus        96 ~~-~~~lv~e~~~~~~l~~~l~~~~~------------------------------------------------------  120 (183)
                      .+ ..+++|||+++++|.+++.....                                                      
T Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (359)
T 3vhe_A           98 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVE  177 (359)
T ss_dssp             TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------
T ss_pred             CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhh
Confidence            55 48999999999999999875432                                                      


Q ss_pred             -----------CCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          121 -----------QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       121 -----------~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                                 .+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+..
T Consensus       178 ~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~  243 (359)
T 3vhe_A          178 EEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI  243 (359)
T ss_dssp             ------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred             hcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeee
Confidence                       166777888999999999999998   9999999999999999999999999999854

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.95  E-value=1.7e-27  Score=183.42  Aligned_cols=148  Identities=20%  Similarity=0.269  Sum_probs=128.7

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      ..|.+.+.||+|+||.||+|... ++..+++|.+...  .......+.+|+.+++.++||||+++++++.+.+..+++||
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e  108 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD  108 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            45778889999999999999976 4788999998643  23344678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC---cccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR---CAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~---~~~i~dfg~a~~~~  179 (183)
                      ++++++|.+.+... ..+++..+..++.|++.||.|||++   +|+|+||||+||+++..+   .+||+|||+|+...
T Consensus       109 ~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~  182 (362)
T 2bdw_A          109 LVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  182 (362)
T ss_dssp             CCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred             cCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence            99999999988653 4577888888999999999999998   999999999999998654   59999999998653

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.95  E-value=8.1e-28  Score=181.98  Aligned_cols=147  Identities=23%  Similarity=0.325  Sum_probs=126.4

Q ss_pred             HhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC--eEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS--KKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||+|.... +..+++|.+.... ......+.+|+.+++.++||||+++++++....  ..+++||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   89 (319)
T 4euu_A           10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME   89 (319)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred             CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence            36677899999999999999764 7889999987543 223456778999999999999999999988655  7899999


Q ss_pred             ccCCCCHHHHHhcCC--CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe----cCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAE--KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM----DENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~----~~~~~~~i~dfg~a~~~  178 (183)
                      |+++++|.+++....  ..+++..+..++.|++.||.|||++   +++|+||||+||++    +..+.+||+|||+|+..
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~  166 (319)
T 4euu_A           90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL  166 (319)
T ss_dssp             CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred             CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence            999999999997643  2378888889999999999999998   99999999999998    77788999999999864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.95  E-value=5.9e-28  Score=185.46  Aligned_cols=147  Identities=22%  Similarity=0.238  Sum_probs=127.8

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhh---HHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLD---EREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      ..+.+.+.||+|+||.||+|.... ++.+|+|.+.+...   .....+..|..++..+ .||+|+++++++.+.+..+++
T Consensus        20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   99 (353)
T 2i0e_A           20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV   99 (353)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence            346677899999999999999875 67899999876422   2235677899999887 799999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |||+++++|.+.+... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       100 ~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~  171 (353)
T 2i0e_A          100 MEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  171 (353)
T ss_dssp             EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence            9999999999988654 3467888888999999999999998   9999999999999999999999999999853

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.95  E-value=1.6e-27  Score=181.15  Aligned_cols=147  Identities=23%  Similarity=0.300  Sum_probs=128.7

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH------HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE------REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (183)
                      ..|.+.+.||+|+||.||+|... ++..+++|.+......      ....+.+|+.+++.++||||+++++++.+....+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            45778889999999999999976 4788999988653211      2456889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC----cccccceeccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR----CAKNFRLWIGK  176 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~----~~~i~dfg~a~  176 (183)
                      ++||++++++|.+++... ..+++..+..++.|++.||.|||+.   +++|+||||+||+++.++    .+||+|||+|+
T Consensus        91 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~  166 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  166 (326)
T ss_dssp             EEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence            999999999999998653 4577888889999999999999998   999999999999998877    79999999998


Q ss_pred             cc
Q 048219          177 VD  178 (183)
Q Consensus       177 ~~  178 (183)
                      ..
T Consensus       167 ~~  168 (326)
T 2y0a_A          167 KI  168 (326)
T ss_dssp             EC
T ss_pred             EC
Confidence            65

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.95  E-value=4.1e-28  Score=184.19  Aligned_cols=146  Identities=25%  Similarity=0.310  Sum_probs=125.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .|.+.+.||+|+||.||+|... +++.+++|.+..... .....+.+|+.+++.++|+||+++++++.+.+..+++|||+
T Consensus         8 ~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   87 (323)
T 3tki_A            8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC   87 (323)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcC
Confidence            3567789999999999999976 678899999864322 22356788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|.+++... ..+++..+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        88 ~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  155 (323)
T 3tki_A           88 SGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVF  155 (323)
T ss_dssp             TTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeecccee
Confidence            999999988543 3577888889999999999999998   9999999999999999999999999999754

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.95  E-value=1e-27  Score=178.41  Aligned_cols=147  Identities=20%  Similarity=0.301  Sum_probs=121.4

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC----CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      ..+.+.+.||+|+||.||+|....    +..+++|.+.... ......+.+|+.+++.++||||+++++++ ..+..+++
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv   93 (281)
T 1mp8_A           15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWII   93 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred             HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEE
Confidence            456777899999999999998653    4568899876532 33446788999999999999999999987 45678999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||++++++|.+++......+++..+..++.|++.||.|+|++   +++|+||||+||+++.++.++|+|||+|+..
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (281)
T 1mp8_A           94 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  166 (281)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccccc
Confidence            999999999999976655678888888999999999999998   9999999999999999999999999999865

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.95  E-value=1.9e-27  Score=182.30  Aligned_cols=147  Identities=26%  Similarity=0.376  Sum_probs=127.8

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch---hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV---LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+...+.||+|+||.||+|... ++..+++|.+...   .......+.+|+.+++.++||||+++++++...+..++|||
T Consensus        55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  134 (348)
T 1u5q_A           55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME  134 (348)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence            3566678999999999999974 6788999998642   23334578899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |+. |++.+.+......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+...
T Consensus       135 ~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          135 YCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             CCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             cCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence            997 588887765556678888889999999999999998   99999999999999999999999999998653

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.95  E-value=6.2e-28  Score=186.18  Aligned_cols=147  Identities=29%  Similarity=0.438  Sum_probs=125.4

Q ss_pred             HHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (183)
                      ..+.+.+.||+|+||.||+|...      .+..+++|.+.... ......+..|+.++..++||||+++++++......+
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            44666788999999999999843      35679999986532 334456888999999999999999999999989999


Q ss_pred             EEEeccCCCCHHHHHhcCC------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC---cccccc
Q 048219          101 LVYEYMSNGSLADILFNAE------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR---CAKNFR  171 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~---~~~i~d  171 (183)
                      +|||++++++|.+++....      ..+.+..+..++.|++.||.|||++   +|+||||||+||+++.++   .+||+|
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~D  227 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD  227 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECC
Confidence            9999999999999997532      3467788888999999999999998   999999999999999554   599999


Q ss_pred             eecccc
Q 048219          172 LWIGKV  177 (183)
Q Consensus       172 fg~a~~  177 (183)
                      ||+|+.
T Consensus       228 FG~a~~  233 (367)
T 3l9p_A          228 FGMARD  233 (367)
T ss_dssp             CHHHHH
T ss_pred             Cccccc
Confidence            999974

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=7.5e-28  Score=177.55  Aligned_cols=146  Identities=28%  Similarity=0.403  Sum_probs=130.6

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      .+.+.+.||+|+||.||++...++..+++|.+..... ....+.+|+.++..++||||+++++++...+..+++||++++
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (267)
T 3t9t_A            9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH   87 (267)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred             heeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence            4566788999999999999988888899999875432 235688899999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|.+++......+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        88 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~  154 (267)
T 3t9t_A           88 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFV  154 (267)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred             CcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccc
Confidence            999999977656678888888999999999999998   9999999999999999999999999999854

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.95  E-value=9.3e-28  Score=183.01  Aligned_cols=147  Identities=26%  Similarity=0.419  Sum_probs=128.0

Q ss_pred             HhchhcccCcCcCceEEEEEEcC------CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      .+.+.+.||+|+||.||+|....      +..+++|.+.... ......+.+|+.++..++||||+++++++...+..++
T Consensus        48 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  127 (343)
T 1luf_A           48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL  127 (343)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEE
Confidence            45566789999999999998753      4789999987543 3345678899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCC-----------------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCC
Q 048219          102 VYEYMSNGSLADILFNAE-----------------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQN  158 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~n  158 (183)
                      +|||+++++|.+++....                       ..+++..+..++.|++.||.|||++   +++|+||||+|
T Consensus       128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~N  204 (343)
T 1luf_A          128 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRN  204 (343)
T ss_dssp             EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             EEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcce
Confidence            999999999999987532                       3567788888999999999999998   99999999999


Q ss_pred             EEecCCCcccccceeccccc
Q 048219          159 ILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       159 il~~~~~~~~i~dfg~a~~~  178 (183)
                      |+++.++.+||+|||+|+..
T Consensus       205 Il~~~~~~~kl~Dfg~~~~~  224 (343)
T 1luf_A          205 CLVGENMVVKIADFGLSRNI  224 (343)
T ss_dssp             EEECGGGCEEECCCSCHHHH
T ss_pred             EEECCCCeEEEeecCCCccc
Confidence            99999999999999999753

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.95  E-value=1.2e-27  Score=190.11  Aligned_cols=146  Identities=24%  Similarity=0.324  Sum_probs=129.3

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH---HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+.+....   ....+.+|+.+++.++||||+++++++.+.+..+++||
T Consensus        17 ~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E   96 (476)
T 2y94_A           17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVME   96 (476)
T ss_dssp             TEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            4667789999999999999976 6889999998754322   23568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+++++|.+++... ..+++..+..++.|++.||.|||++   +++||||||+||+++.++.+||+|||+|+..
T Consensus        97 ~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~  166 (476)
T 2y94_A           97 YVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMM  166 (476)
T ss_dssp             CCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence            99999999988653 4577888888999999999999998   9999999999999999999999999999864

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.95  E-value=8.1e-28  Score=185.19  Aligned_cols=144  Identities=26%  Similarity=0.302  Sum_probs=125.2

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +|.+.+.||+|+||.||++... ++..+++|.+.+... ....+.+|+.+++.++||||+++++++.+....+++|||++
T Consensus        21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   99 (361)
T 3uc3_A           21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS   99 (361)
T ss_dssp             TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence            4778889999999999999976 578899999865322 23457789999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc--ccccceecccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC--AKNFRLWIGKV  177 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~--~~i~dfg~a~~  177 (183)
                      +++|.+++... ..+++..+..++.|++.||.|||++   +++||||||+||+++.++.  +||+|||+|+.
T Consensus       100 ~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~  167 (361)
T 3uc3_A          100 GGELYERICNA-GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS  167 (361)
T ss_dssp             SCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence            99999988653 3477888888999999999999998   9999999999999987765  99999999974

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.95  E-value=5.1e-28  Score=193.30  Aligned_cols=149  Identities=27%  Similarity=0.388  Sum_probs=131.0

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      ....+.+.+.||+|+||.||+|.... +..+++|.+.... .....+.+|+.+++.++||||+++++++......++|||
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E  296 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE  296 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence            34456677899999999999999875 7789999987542 234578899999999999999999999998899999999


Q ss_pred             ccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++|.+++.... ..+++.....++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  368 (495)
T 1opk_A          297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLM  368 (495)
T ss_dssp             CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECC
T ss_pred             ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceec
Confidence            999999999997643 4577888888999999999999998   9999999999999999999999999999865

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.95  E-value=2.2e-28  Score=193.47  Aligned_cols=149  Identities=23%  Similarity=0.344  Sum_probs=128.9

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      +....+.+.+.||+|+||.||+|....+..+++|.+.... .....+.+|+.+++.++||||+++++++. ....+++||
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e  262 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE  262 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred             echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence            3344566778999999999999998888889999987542 23567889999999999999999999875 667899999


Q ss_pred             ccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++|.+++.... ...+......++.|++.||.|||++   +++||||||+||+++.++.+||+|||+|+..
T Consensus       263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~  334 (454)
T 1qcf_A          263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVI  334 (454)
T ss_dssp             CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred             ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence            999999999996432 2466777888999999999999998   9999999999999999999999999999865

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.95  E-value=9.5e-28  Score=183.18  Aligned_cols=145  Identities=25%  Similarity=0.359  Sum_probs=126.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHH---HHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+.+.....   ...+.+|+.+++.++||||+++++++.+.+..+++||
T Consensus        10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E   89 (336)
T 3h4j_B           10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE   89 (336)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEE
Confidence            3667789999999999999975 57889999987543221   2468899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+ ++++.+.+... ..+++.....++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        90 ~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~  158 (336)
T 3h4j_B           90 YA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM  158 (336)
T ss_dssp             CC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred             CC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence            99 67888887654 3577888888999999999999998   9999999999999999999999999999865

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.95  E-value=2.3e-29  Score=191.82  Aligned_cols=148  Identities=14%  Similarity=0.154  Sum_probs=118.0

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchh--------hHHHHHHHHHHHHHhhcC---------CCceee
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVL--------DEREREFQTEIKVIGRTH---------HRNLVR   88 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~--------~~~~~~~~~e~~~l~~l~---------h~~i~~   88 (183)
                      ....|.+.+.||+|+||.||+|.. ++..+|+|.+....        ......+.+|+.+++.++         |+|+++
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            345677888999999999999987 67889999987532        112356778888887775         555555


Q ss_pred             eece-----------------EEe-------------CCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 048219           89 LLGY-----------------SLE-------------VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI  138 (183)
Q Consensus        89 ~~~~-----------------~~~-------------~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l  138 (183)
                      +.+.                 +.+             .+..++||||+++|++.+.+..  ..+++..+..++.|++.||
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHH
Confidence            5444                 433             6789999999999876665533  4567888899999999999


Q ss_pred             HHhh-hCCCCCceecCCCCCCEEecCCC--------------------cccccceecccccc
Q 048219          139 LYLH-DECETQIIHCDIKPQNILMDENR--------------------CAKNFRLWIGKVDE  179 (183)
Q Consensus       139 ~~lh-~~~~~~i~H~dl~~~nil~~~~~--------------------~~~i~dfg~a~~~~  179 (183)
                      .||| ++   +|+||||||+||+++.++                    .+||+|||+|+...
T Consensus       175 ~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~  233 (336)
T 2vuw_A          175 AVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLER  233 (336)
T ss_dssp             HHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEE
T ss_pred             HHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecC
Confidence            9999 87   999999999999999887                    89999999998653

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.95  E-value=2.2e-27  Score=176.21  Aligned_cols=148  Identities=25%  Similarity=0.313  Sum_probs=130.2

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHH---HHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+.......   ...+.+|+.++..++||||+++++++.+.+..+++||
T Consensus        12 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   91 (278)
T 3cok_A           12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLE   91 (278)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEe
Confidence            3566788999999999999975 67889999986543221   3568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++++|.+++......+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||++....
T Consensus        92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~  163 (278)
T 3cok_A           92 MCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK  163 (278)
T ss_dssp             CCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             cCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence            9999999999976656678888899999999999999998   99999999999999999999999999998643

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.95  E-value=1e-27  Score=189.79  Aligned_cols=146  Identities=18%  Similarity=0.328  Sum_probs=117.2

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC-----CeEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV-----SKKI  100 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~  100 (183)
                      .|.+.+.||+|+||.||+|... ++..||+|.+.+.  .......+.+|+.+++.++|+||+++++++...     ...+
T Consensus        54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~  133 (458)
T 3rp9_A           54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY  133 (458)
T ss_dssp             TEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred             CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence            4667789999999999999876 5788999988653  233456788999999999999999999998543     5689


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +|||++ +++|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus       134 lv~e~~-~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  207 (458)
T 3rp9_A          134 VVLEIA-DSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVD  207 (458)
T ss_dssp             EEECCC-SEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred             EEEecc-ccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence            999988 56898888653 4577888888999999999999998   99999999999999999999999999998753

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.95  E-value=2.2e-27  Score=191.70  Aligned_cols=146  Identities=23%  Similarity=0.216  Sum_probs=127.9

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      +.+.+.||+|+||.||+|... +++.+|+|.+.+...   .....+.+|+.++..++||||+++++++.+.+..++||||
T Consensus       186 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy  265 (576)
T 2acx_A          186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL  265 (576)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEc
Confidence            445578999999999999976 588999999875422   1234578899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+.+.... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       266 ~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~  336 (576)
T 2acx_A          266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV  336 (576)
T ss_dssp             CCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceec
Confidence            99999999887643 3477888888999999999999998   9999999999999999999999999999864

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.95  E-value=1.4e-27  Score=181.24  Aligned_cols=148  Identities=27%  Similarity=0.423  Sum_probs=129.4

Q ss_pred             HHhchhcccCcCcCceEEEEEE-----cCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC--eEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAM-----INRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS--KKI  100 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~  100 (183)
                      ..+.+.+.||+|+||.||+|..     .++..+++|.+..........+.+|+.+++.++|+||+++.+++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            3466778999999999999984     257889999987655556677899999999999999999999886543  789


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++||++++++|.+++......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+..
T Consensus       121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~  195 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL  195 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence            99999999999999987666678888888999999999999998   9999999999999999999999999999865

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.7e-27  Score=181.79  Aligned_cols=150  Identities=21%  Similarity=0.333  Sum_probs=126.8

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCC
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVS   97 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   97 (183)
                      ....+.+.+.||+|+||.||+|...      .+..+++|.+.... ......+.+|+.++..+ +||||+++++++...+
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            3445677789999999999999862      34579999986542 22345788999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCC----------------------CCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCC
Q 048219           98 KKILVYEYMSNGSLADILFNAEK----------------------QPNWIERTGIARDIARGILYLHDECETQIIHCDIK  155 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~  155 (183)
                      ..+++||++++++|.+++.....                      .+++..+..++.|++.||.|||++   +++|+|||
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik  199 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA  199 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence            99999999999999999976432                      257778888999999999999998   99999999


Q ss_pred             CCCEEecCCCcccccceeccccc
Q 048219          156 PQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       156 ~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+||+++.++.++|+|||+|+..
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~  222 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDI  222 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCG
T ss_pred             hhhEEEcCCCcEEeCCCccCccc
Confidence            99999999999999999999855

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.95  E-value=2.3e-27  Score=177.69  Aligned_cols=147  Identities=27%  Similarity=0.470  Sum_probs=125.6

Q ss_pred             HhchhcccCcCcCceEEEEEEcC----CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEE-eCCeEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSL-EVSKKILV  102 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv  102 (183)
                      .+.+.+.||+|+||.||+|....    ...+++|.+.... ......+.+|+.+++.++||||+++++++. ..+..+++
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  105 (298)
T 3f66_A           26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  105 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence            35566789999999999998543    2357888876532 334567889999999999999999999865 45678999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||++++++|.+++......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+..
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~  178 (298)
T 3f66_A          106 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM  178 (298)
T ss_dssp             EECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred             EeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccc
Confidence            999999999999977666678888888999999999999998   9999999999999999999999999999854

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.95  E-value=1.5e-27  Score=188.62  Aligned_cols=144  Identities=27%  Similarity=0.369  Sum_probs=125.3

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC-eEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS-KKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~  107 (183)
                      .+.+.+.||+|+||.||+|... +..+++|.++...  ....+.+|+.+++.++||||+++++++.... ..+++||+++
T Consensus       194 ~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~  270 (450)
T 1k9a_A          194 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA  270 (450)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCT
T ss_pred             HeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecC
Confidence            3455678999999999999875 5689999987543  3456889999999999999999999987654 7899999999


Q ss_pred             CCCHHHHHhcCCC-CCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEK-QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+++..... .++......++.|++.||.|||++   +++||||||+||+++.++.+||+|||+|+..
T Consensus       271 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  339 (450)
T 1k9a_A          271 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA  339 (450)
T ss_dssp             TCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence            9999999976543 357788888999999999999998   9999999999999999999999999999854

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.95  E-value=2.1e-27  Score=178.95  Aligned_cols=149  Identities=24%  Similarity=0.360  Sum_probs=128.7

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   99 (183)
                      ...+.+.+.||+|+||.||+|...      ++..+++|.+.... ......+.+|+.+++.++||||+++++++...+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            445677789999999999999863      34779999986542 34456788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCC-----------------------CCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCC
Q 048219          100 ILVYEYMSNGSLADILFNAEK-----------------------QPNWIERTGIARDIARGILYLHDECETQIIHCDIKP  156 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~-----------------------~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~  156 (183)
                      +++||++++++|.+++.....                       .+++..+..++.|++.||.|||++   +++|+||||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp  178 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA  178 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence            999999999999999976432                       256778888999999999999998   999999999


Q ss_pred             CCEEecCCCcccccceeccccc
Q 048219          157 QNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       157 ~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +||+++.++.++|+|||+|+..
T Consensus       179 ~NIli~~~~~~kl~Dfg~~~~~  200 (314)
T 2ivs_A          179 RNILVAEGRKMKISDFGLSRDV  200 (314)
T ss_dssp             GGEEEETTTEEEECCCTTCEEC
T ss_pred             heEEEcCCCCEEEccccccccc
Confidence            9999999999999999999754

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.95  E-value=1.9e-27  Score=179.52  Aligned_cols=152  Identities=21%  Similarity=0.129  Sum_probs=127.2

Q ss_pred             HHHHHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeE
Q 048219           24 ELKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        24 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   99 (183)
                      ++-...+.+.+.||+|+||.||+|... ++..+|+|.+....  .........|+..+..+ .|+|++++++++...+..
T Consensus        53 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~  132 (311)
T 3p1a_A           53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL  132 (311)
T ss_dssp             CHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             chhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEE
Confidence            344466788889999999999999987 68899999875422  22333445555555544 899999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++||++ ++++.+.+......+++..+..++.|++.||.|||++   +|+|+||||+||+++.++.+||+|||+|+...
T Consensus       133 ~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~  208 (311)
T 3p1a_A          133 YLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG  208 (311)
T ss_dssp             EEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred             EEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence            9999999 6799888876666688899999999999999999998   99999999999999999999999999987653

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.95  E-value=2.9e-27  Score=175.42  Aligned_cols=147  Identities=22%  Similarity=0.312  Sum_probs=129.6

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ..|.+.+.||+|+||.||+|.... +..+++|.+.+........+.+|+.+++.++||||+++++++.+....+++||++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            457778899999999999999764 6688999887654445567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe---cCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM---DENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~---~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|.+.+... ..+++..+..++.|++.||.|||++   +++|+||+|+||++   +.++.++|+|||+|...
T Consensus        89 ~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~  159 (277)
T 3f3z_A           89 TGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF  159 (277)
T ss_dssp             CSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence            999999888653 3467888888999999999999998   99999999999999   77889999999999754

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.95  E-value=6e-28  Score=190.57  Aligned_cols=146  Identities=20%  Similarity=0.200  Sum_probs=119.9

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+.+.+.||+|+||.||+|... ++..+|+|.+.+..   ......+..|+.+++.++||||+++++++...+..++|||
T Consensus       149 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e  228 (446)
T 4ejn_A          149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME  228 (446)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEEC
T ss_pred             HcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEe
Confidence            3566689999999999999975 57889999987532   2233557789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhh-CCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD-ECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+++++|.+.+... ..+++..+..++.|++.||.|||+ .   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       229 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~  299 (446)
T 4ejn_A          229 YANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG  299 (446)
T ss_dssp             CCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred             eCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence            99999999988654 356788888899999999999998 6   9999999999999999999999999999863

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.95  E-value=1e-27  Score=179.80  Aligned_cols=145  Identities=25%  Similarity=0.317  Sum_probs=121.0

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH--------------------------HHHHHHHHHHHHhhc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE--------------------------REREFQTEIKVIGRT   81 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~--------------------------~~~~~~~e~~~l~~l   81 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+......                          ....+.+|+.+++.+
T Consensus        14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   93 (298)
T 2zv2_A           14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL   93 (298)
T ss_dssp             TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred             ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence            4677789999999999999875 5788999988643211                          124578899999999


Q ss_pred             CCCceeeeeceEEe--CCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCE
Q 048219           82 HHRNLVRLLGYSLE--VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI  159 (183)
Q Consensus        82 ~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~ni  159 (183)
                      +||||+++++++.+  ....+++||+++++++.++..  ...+++.....++.|++.||.|||++   +++|+||||+||
T Consensus        94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Ni  168 (298)
T 2zv2_A           94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNL  168 (298)
T ss_dssp             CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred             CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHE
Confidence            99999999999986  567899999999998877543  24577888888999999999999998   999999999999


Q ss_pred             EecCCCcccccceeccccc
Q 048219          160 LMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       160 l~~~~~~~~i~dfg~a~~~  178 (183)
                      +++.++.+||+|||+|+..
T Consensus       169 l~~~~~~~kl~Dfg~~~~~  187 (298)
T 2zv2_A          169 LVGEDGHIKIADFGVSNEF  187 (298)
T ss_dssp             EECTTSCEEECCCTTCEEC
T ss_pred             EECCCCCEEEecCCCcccc
Confidence            9999999999999999854

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.95  E-value=2.3e-27  Score=178.64  Aligned_cols=150  Identities=23%  Similarity=0.343  Sum_probs=129.9

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCe
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSK   98 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   98 (183)
                      ...+.+.+.||+|+||.||+|...      .+..+++|.+.... ......+.+|+.++..+ +||||+++++++...+.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            345777889999999999999852      35789999987543 23456788999999999 89999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCC-----------------CCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe
Q 048219           99 KILVYEYMSNGSLADILFNAEK-----------------QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM  161 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~  161 (183)
                      .+++||++++++|.+++.....                 .+++..+..++.|++.||.|||++   +++|+||||+||++
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~  178 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL  178 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence            9999999999999999976432                 367888888999999999999998   99999999999999


Q ss_pred             cCCCcccccceecccccc
Q 048219          162 DENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       162 ~~~~~~~i~dfg~a~~~~  179 (183)
                      +.++.++|+|||+|+...
T Consensus       179 ~~~~~~kl~Dfg~~~~~~  196 (313)
T 1t46_A          179 THGRITKICDFGLARDIK  196 (313)
T ss_dssp             ETTTEEEECCCGGGSCTT
T ss_pred             cCCCCEEEcccccccccc
Confidence            999999999999998653

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=2.5e-27  Score=180.46  Aligned_cols=146  Identities=27%  Similarity=0.459  Sum_probs=124.5

Q ss_pred             hchhcccCcCcCceEEEEEEcC-----CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-----~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      +.+.+.||+|+||.||+|....     +..+++|.+.... ......+.+|+.++..++||||+++++++...+..+++|
T Consensus        46 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  125 (333)
T 1mqb_A           46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT  125 (333)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             hhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEE
Confidence            3445789999999999998653     2458999986543 234456889999999999999999999999889999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++++++|.+++......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus       126 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  197 (333)
T 1mqb_A          126 EYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL  197 (333)
T ss_dssp             ECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             eCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence            99999999999977656678888899999999999999998   9999999999999999999999999999865

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.95  E-value=3.9e-27  Score=189.50  Aligned_cols=144  Identities=24%  Similarity=0.264  Sum_probs=126.1

Q ss_pred             hhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH---HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           32 FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +.+.||+|+||.||+|... +++.+++|.+.+....   ....+..|+.++..++||||+++++++.+....+++|||++
T Consensus       189 ~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~  268 (543)
T 3c4z_A          189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMN  268 (543)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEecc
Confidence            3357999999999999976 5889999998754322   23567889999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCC---CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAE---KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+.+....   ..+++.....++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       269 gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~  339 (543)
T 3c4z_A          269 GGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL  339 (543)
T ss_dssp             TCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence            999999886542   3577888888999999999999998   9999999999999999999999999999854

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.95  E-value=1.2e-27  Score=184.92  Aligned_cols=146  Identities=26%  Similarity=0.256  Sum_probs=118.7

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchh---hHHHHHHHHHHHH-HhhcCCCceeeeeceEEeCCeEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVL---DEREREFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~---~~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      ..+.+.+.||+|+||.||+|.... +..+++|.+.+..   ......+..|..+ ++.++||||+++++++.+.+..++|
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            346677899999999999999764 7789999986543   1223445666665 5678999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      |||+++++|.+.+... ..+.+.....++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+.
T Consensus       118 ~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          118 LDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKE  188 (373)
T ss_dssp             EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred             EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccc
Confidence            9999999999988654 3466777788999999999999998   999999999999999999999999999985

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.95  E-value=6.8e-28  Score=179.67  Aligned_cols=150  Identities=27%  Similarity=0.391  Sum_probs=131.4

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      ....+.+.+.||+|+||.||+|.... +..+++|.+.... .....+.+|+.+++.++||||+++++++.+.+..+++||
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   89 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   89 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence            34556777899999999999999775 7789999986543 234578899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          105 YMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++++|.+++.... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+...
T Consensus        90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~  162 (288)
T 3kfa_A           90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT  162 (288)
T ss_dssp             CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred             cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence            999999999997643 4477888888999999999999998   99999999999999999999999999998654

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.95  E-value=1.5e-27  Score=178.95  Aligned_cols=146  Identities=22%  Similarity=0.350  Sum_probs=127.0

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ..|.+.+.||+|+||.||+|... ++..+++|.+..........+..|+.++..++||||+++++++...+..+++||++
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   98 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC   98 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence            34667789999999999999976 47889999887654444567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      +++++.+++......+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+|.
T Consensus        99 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  165 (302)
T 2j7t_A           99 PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA  165 (302)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHH
T ss_pred             CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCc
Confidence            99999998876556678888899999999999999998   99999999999999999999999999875

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.95  E-value=1.4e-27  Score=180.68  Aligned_cols=146  Identities=24%  Similarity=0.322  Sum_probs=114.2

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+..... .....+.+|+.+++.++||||+++++++.+.+..+++||++
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   85 (317)
T 2pmi_A            6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM   85 (317)
T ss_dssp             -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred             ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence            3556678999999999999865 578899998864322 22356778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCC-----CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAE-----KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      + ++|.+++....     ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  158 (317)
T 2pmi_A           86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF  158 (317)
T ss_dssp             C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred             C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence            7 59988875421     3467778888999999999999998   9999999999999999999999999999864

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.95  E-value=4.1e-28  Score=191.91  Aligned_cols=148  Identities=28%  Similarity=0.382  Sum_probs=127.1

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      ....+.+.+.||+|+||.||+|....+..+++|.+.... .....+.+|+.+++.++||||+++++++.. +..+++||+
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~  259 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  259 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence            334566778999999999999998887889999987542 224568899999999999999999998765 678999999


Q ss_pred             cCCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++... ...+++..+..++.|++.||.|||++   +++||||||+||+++.++.+||+|||+|+..
T Consensus       260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  330 (452)
T 1fmk_A          260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLI  330 (452)
T ss_dssp             CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--
T ss_pred             hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceec
Confidence            9999999999642 24577888889999999999999998   9999999999999999999999999999864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.95  E-value=1.7e-27  Score=180.41  Aligned_cols=148  Identities=22%  Similarity=0.309  Sum_probs=117.5

Q ss_pred             HHhchhcccCcCcCceEEEEEEcCC----cEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE--
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMINR----QLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK--   99 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~~----~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~--   99 (183)
                      ..+.+.+.||+|+||.||+|.....    ..+++|.+...  .......+.+|+.+++.++||||+++++++......  
T Consensus        23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  102 (323)
T 3qup_A           23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR  102 (323)
T ss_dssp             --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred             hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence            4577788999999999999986543    27899988653  233456788999999999999999999999876554  


Q ss_pred             ----EEEEeccCCCCHHHHHhcCC-----CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccc
Q 048219          100 ----ILVYEYMSNGSLADILFNAE-----KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNF  170 (183)
Q Consensus       100 ----~lv~e~~~~~~l~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~  170 (183)
                          +++||++++++|.+++....     ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+
T Consensus       103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~  179 (323)
T 3qup_A          103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVA  179 (323)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEEC
T ss_pred             CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEe
Confidence                89999999999999885421     2467888889999999999999998   99999999999999999999999


Q ss_pred             ceeccccc
Q 048219          171 RLWIGKVD  178 (183)
Q Consensus       171 dfg~a~~~  178 (183)
                      |||+|+..
T Consensus       180 Dfg~a~~~  187 (323)
T 3qup_A          180 DFGLSRKI  187 (323)
T ss_dssp             CCCC----
T ss_pred             eccccccc
Confidence            99999764

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.95  E-value=1.2e-27  Score=181.01  Aligned_cols=151  Identities=23%  Similarity=0.360  Sum_probs=129.1

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS   97 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   97 (183)
                      +....+.+.+.||+|+||.||+|...      .+..+++|.+.... ......+.+|+.+++.++|+||+++++++.+.+
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~  101 (322)
T 1p4o_A           22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ  101 (322)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred             chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence            34456778889999999999999754      35679999986543 233456889999999999999999999999889


Q ss_pred             eEEEEEeccCCCCHHHHHhcCC---------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccc
Q 048219           98 KKILVYEYMSNGSLADILFNAE---------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK  168 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~  168 (183)
                      ..+++||++++++|.+++....         ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++
T Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~k  178 (322)
T 1p4o_A          102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK  178 (322)
T ss_dssp             SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEE
T ss_pred             ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEE
Confidence            9999999999999999886421         3456778888999999999999998   999999999999999999999


Q ss_pred             ccceeccccc
Q 048219          169 NFRLWIGKVD  178 (183)
Q Consensus       169 i~dfg~a~~~  178 (183)
                      |+|||+|+..
T Consensus       179 l~Dfg~~~~~  188 (322)
T 1p4o_A          179 IGDFGMTRDI  188 (322)
T ss_dssp             ECCTTCCCGG
T ss_pred             ECcCcccccc
Confidence            9999999854

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.95  E-value=2.6e-27  Score=186.33  Aligned_cols=146  Identities=21%  Similarity=0.280  Sum_probs=126.3

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC-----CeEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV-----SKKI  100 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~  100 (183)
                      .|.+.+.||+|+||.||+|... ++..+|+|.+.+.  .......+.+|+.+++.++|+||+++++++...     ...+
T Consensus        27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~  106 (432)
T 3n9x_A           27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY  106 (432)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred             CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence            4667789999999999999976 4778999998653  233456788999999999999999999998765     5689


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +|||++. ++|.+.+... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus       107 lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~  180 (432)
T 3n9x_A          107 IVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN  180 (432)
T ss_dssp             EEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred             EEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence            9999986 5999988653 4578888889999999999999998   99999999999999999999999999998653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.95  E-value=1.5e-27  Score=181.34  Aligned_cols=144  Identities=17%  Similarity=0.218  Sum_probs=125.8

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+....  ....+..|+.+++.+ +|+||+++++++......+++||++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~   87 (330)
T 2izr_A           10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL   87 (330)
T ss_dssp             TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred             CeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence            3566789999999999999964 67889999876432  123577899999999 8999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc-----ccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC-----AKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~-----~~i~dfg~a~~~  178 (183)
                       +++|.+++......+++..+..++.|++.||.|||+.   +++||||||+||+++.++.     ++|+|||+|+..
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~  160 (330)
T 2izr_A           88 -GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY  160 (330)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred             -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence             8999999987656788889999999999999999998   9999999999999998887     999999999864

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.95  E-value=5.1e-27  Score=177.22  Aligned_cols=148  Identities=21%  Similarity=0.226  Sum_probs=127.1

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEe----CCeEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE----VSKKILV  102 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv  102 (183)
                      ..|.+.+.||+|+||.||++... ++..+++|.+..........+.+|+.+++.++||||+++++++..    ....+++
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  108 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL  108 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred             eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence            35677789999999999999974 678899998866555566778899999999999999999999873    3478899


Q ss_pred             EeccCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||++++++|.+++..   ....+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+++..
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence            999999999998865   345678888889999999999999998   9999999999999999999999999988754

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.95  E-value=5.4e-27  Score=178.58  Aligned_cols=150  Identities=23%  Similarity=0.358  Sum_probs=128.3

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEc--------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEe
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMI--------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLE   95 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~--------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   95 (183)
                      ....+.+.+.||+|+||.||+|...        .+..+++|.+.... ......+.+|+.+++.+ +||||+++++++..
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            3456777889999999999999864        35679999987543 33456788999999999 89999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEE
Q 048219           96 VSKKILVYEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNIL  160 (183)
Q Consensus        96 ~~~~~lv~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil  160 (183)
                      .+..+++||++++++|.+++....               ..+++..+..++.|++.||.|||++   +++|+||||+||+
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl  189 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL  189 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence            999999999999999999997543               1367778888999999999999998   9999999999999


Q ss_pred             ecCCCcccccceeccccc
Q 048219          161 MDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       161 ~~~~~~~~i~dfg~a~~~  178 (183)
                      ++.++.+||+|||+|+..
T Consensus       190 l~~~~~~kL~Dfg~~~~~  207 (334)
T 2pvf_A          190 VTENNVMKIADFGLARDI  207 (334)
T ss_dssp             ECTTCCEEECCCTTCEEC
T ss_pred             EcCCCCEEEccccccccc
Confidence            999999999999999754

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.95  E-value=7.4e-27  Score=175.62  Aligned_cols=158  Identities=42%  Similarity=0.648  Sum_probs=135.5

Q ss_pred             CceeCHHHHHHHHhchh--------cccCcCcCceEEEEEEcCCcEEEEEEccchh----hHHHHHHHHHHHHHhhcCCC
Q 048219           17 PFSFSYAELKKITDGFK--------EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL----DEREREFQTEIKVIGRTHHR   84 (183)
Q Consensus        17 ~~~~~~~~~~~~~~~~~--------~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~l~h~   84 (183)
                      ...+...++.....++.        +.||+|+||.||+|.. ++..+++|.+....    ......+.+|+.+++.++||
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   90 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE   90 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence            34578888888887775        4599999999999976 56789999876421    23346788999999999999


Q ss_pred             ceeeeeceEEeCCeEEEEEeccCCCCHHHHHhcC--CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec
Q 048219           85 NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNA--EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD  162 (183)
Q Consensus        85 ~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~  162 (183)
                      ||+++++++...+..+++||++++++|.+++...  ...+++..+..++.|++.||.|||++   +++|+||+|+||+++
T Consensus        91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~  167 (307)
T 2nru_A           91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD  167 (307)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred             CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEc
Confidence            9999999999999999999999999999988643  23477888888999999999999998   999999999999999


Q ss_pred             CCCcccccceeccccc
Q 048219          163 ENRCAKNFRLWIGKVD  178 (183)
Q Consensus       163 ~~~~~~i~dfg~a~~~  178 (183)
                      .++.++|+|||+|+..
T Consensus       168 ~~~~~kl~Dfg~~~~~  183 (307)
T 2nru_A          168 EAFTAKISDFGLARAS  183 (307)
T ss_dssp             TTCCEEECCCTTCEEC
T ss_pred             CCCcEEEeeccccccc
Confidence            9999999999998754

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.95  E-value=9.7e-28  Score=181.03  Aligned_cols=146  Identities=21%  Similarity=0.266  Sum_probs=124.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCe----EE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSK----KI  100 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~  100 (183)
                      .|.+.+.||+|+||.||+|.+. +++.+++|.+....   ......+.+|+.++..++||||+++++++.....    .+
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~   92 (311)
T 3ork_A           13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY   92 (311)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence            4677889999999999999974 57889999986532   2334568899999999999999999999875443    49


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++|||+++++|.+++... ..+++.....++.|++.||.|+|++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        93 lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~  166 (311)
T 3ork_A           93 IVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI  166 (311)
T ss_dssp             EEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred             EEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence            999999999999998654 3567888888999999999999998   9999999999999999999999999999754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.95  E-value=2.3e-27  Score=180.27  Aligned_cols=147  Identities=25%  Similarity=0.347  Sum_probs=122.7

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-Cc----EEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-RQ----LVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-~~----~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      ..+.+.+.||+|+||.||+|.... +.    .+++|.+.... ......+.+|+.++..++||||+++++++... ..++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEE
Confidence            346677899999999999998653 33    35777775432 23346788999999999999999999998765 4778


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++++++.+++......+++..+..++.|++.||.|||++   +++||||||+||+++.++.+||+|||+|+..
T Consensus        94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~  167 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence            9999999999999987666788888899999999999999998   9999999999999999999999999999864

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=4.1e-27  Score=176.15  Aligned_cols=146  Identities=23%  Similarity=0.409  Sum_probs=125.1

Q ss_pred             hchhcccCcCcCceEEEEEEcC----CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE-EEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK-ILVY  103 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-~lv~  103 (183)
                      +.+.+.||+|+||.||+|....    +..+++|.+.... ......+.+|+.+++.++||||+++++++.+.+.. +++|
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            3345789999999999998543    2368899886533 33456788999999999999999999999876655 8999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++.+++|.+++......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+..
T Consensus       103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  174 (298)
T 3pls_A          103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDI  174 (298)
T ss_dssp             CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred             ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence            99999999999977666778888888999999999999998   9999999999999999999999999999744

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.95  E-value=5.9e-27  Score=176.46  Aligned_cols=146  Identities=23%  Similarity=0.289  Sum_probs=127.2

Q ss_pred             hchhcccCcCcCceEEEEEEcC-CcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      |.+.+.||+|+||.||+|.... +..+++|.+....  ......+.+|+.+++.++||||+++++++...+..+++||++
T Consensus         5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (311)
T 4agu_A            5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC   84 (311)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             ceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeC
Confidence            5667889999999999999764 7889999875432  233456788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++++..++... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+...
T Consensus        85 ~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  153 (311)
T 4agu_A           85 DHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLT  153 (311)
T ss_dssp             SEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence            998888877543 4577888888999999999999998   99999999999999999999999999998653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.95  E-value=5.5e-27  Score=174.88  Aligned_cols=149  Identities=19%  Similarity=0.273  Sum_probs=127.4

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      ..+.+.+.||+|+||.||++... .+..+++|.+.... ......+..|+.+++.++||||+++++++.+....+++||+
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            45778889999999999999975 47789999886543 22346788899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcC---CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec---CCCcccccceecccccc
Q 048219          106 MSNGSLADILFNA---EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD---ENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~---~~~~~~i~dfg~a~~~~  179 (183)
                      +++++|.+.+...   ...+++..+..++.|++.||.|||+.   +++|+||||+||+++   .++.++|+|||+|+...
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            9999999888542   35577888889999999999999998   999999999999994   45789999999998653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=2e-27  Score=183.73  Aligned_cols=146  Identities=26%  Similarity=0.469  Sum_probs=119.9

Q ss_pred             hchhcccCcCcCceEEEEEEc--C--CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEe-CCeEEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI--N--RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLE-VSKKILVY  103 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~--~--~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~  103 (183)
                      +.+.+.||+|+||.||+|...  +  ...+++|.+.... ......+.+|+.+++.++||||+++++++.. .+..+++|
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            345578999999999999854  2  2457888876432 3445678899999999999999999998754 56789999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||+++++|.+++......+++.....++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus       171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~  242 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM  242 (373)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccc
Confidence            99999999999977666677888888999999999999998   9999999999999999999999999999854

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.95  E-value=9.5e-27  Score=174.21  Aligned_cols=146  Identities=26%  Similarity=0.380  Sum_probs=127.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEe------------
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE------------   95 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------------   95 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+... ......+.+|+.+++.++|||++++++++..            
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   85 (303)
T 1zy4_A            7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK   85 (303)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred             cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence            4667789999999999999975 6788999998653 3345678899999999999999999998865            


Q ss_pred             -CCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceec
Q 048219           96 -VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWI  174 (183)
Q Consensus        96 -~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~  174 (183)
                       .+..+++||++++++|.+++.......++.....++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~  162 (303)
T 1zy4_A           86 KKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGL  162 (303)
T ss_dssp             CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             cCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeCcc
Confidence             3567999999999999999976555566777788999999999999998   999999999999999999999999999


Q ss_pred             cccc
Q 048219          175 GKVD  178 (183)
Q Consensus       175 a~~~  178 (183)
                      |+..
T Consensus       163 ~~~~  166 (303)
T 1zy4_A          163 AKNV  166 (303)
T ss_dssp             CSCT
T ss_pred             hhhc
Confidence            9865

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.95  E-value=2.6e-27  Score=184.38  Aligned_cols=147  Identities=23%  Similarity=0.324  Sum_probs=126.1

Q ss_pred             HhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCC--eEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVS--KKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||+|.... +..+++|.+..... .....+.+|+.+++.++||||+++++++...+  ..+++||
T Consensus        10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e   89 (396)
T 4eut_A           10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME   89 (396)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred             ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence            46677899999999999999764 78999999875432 22456778999999999999999999988655  7799999


Q ss_pred             ccCCCCHHHHHhcCC--CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe----cCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAE--KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM----DENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~----~~~~~~~i~dfg~a~~~  178 (183)
                      |+++++|.+++....  ..+++..+..++.|++.||.|||+.   +|+|+||||+||++    +..+.+||+|||+|+..
T Consensus        90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~  166 (396)
T 4eut_A           90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL  166 (396)
T ss_dssp             CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred             cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence            999999999986533  2378888889999999999999998   99999999999998    77778999999999865

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=9.1e-27  Score=173.74  Aligned_cols=145  Identities=21%  Similarity=0.336  Sum_probs=125.9

Q ss_pred             hchhc-ccCcCcCceEEEEEEc---CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           30 DGFKE-KVGRGSSGTVYKGAMI---NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        30 ~~~~~-~lg~g~~g~v~~~~~~---~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      +.+.+ .||+|+||.||+|...   .+..+++|.+.... ......+.+|+.++..++||||+++++++ ..+..+++||
T Consensus        11 ~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e   89 (287)
T 1u59_A           11 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVME   89 (287)
T ss_dssp             EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEE
T ss_pred             hhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEE
Confidence            34444 8999999999999854   46779999987642 34456788999999999999999999998 5567899999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++|.+++......+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+|+..
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A           90 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             CCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             eCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence            9999999999976556678888899999999999999998   9999999999999999999999999999855

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.95  E-value=6.2e-27  Score=177.52  Aligned_cols=146  Identities=26%  Similarity=0.369  Sum_probs=122.9

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC----eEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS----KKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e  104 (183)
                      .+.+.+.||+|+||.||+|... +..+|+|.+..... .......|+.++..++||||+++++++....    ..+++||
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e  102 (322)
T 3soc_A           25 PLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA  102 (322)
T ss_dssp             EEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             hchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence            4667789999999999999865 67899999865432 2334556888999999999999999998644    3699999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCC-------CCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC-------ETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-------~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      |+++++|.+++...  .+++..+..++.|++.||.|||+..       ..+++|+||||+||+++.++.+||+|||+|+.
T Consensus       103 ~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~  180 (322)
T 3soc_A          103 FHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK  180 (322)
T ss_dssp             CCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             cCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccc
Confidence            99999999999663  4778888899999999999999741       12899999999999999999999999999975


Q ss_pred             c
Q 048219          178 D  178 (183)
Q Consensus       178 ~  178 (183)
                      .
T Consensus       181 ~  181 (322)
T 3soc_A          181 F  181 (322)
T ss_dssp             E
T ss_pred             c
Confidence            4

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.95  E-value=1.8e-26  Score=174.59  Aligned_cols=144  Identities=25%  Similarity=0.353  Sum_probs=125.7

Q ss_pred             chhcccCcCcCceEEEEEEc-----CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEe--CCeEEEE
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-----NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLE--VSKKILV  102 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-----~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv  102 (183)
                      .+.+.||+|+||.||++.+.     ++..+++|.+.... ......+.+|+.+++.++||||+++++++.+  ....+++
T Consensus        34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv  113 (318)
T 3lxp_A           34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV  113 (318)
T ss_dssp             EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred             hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence            67789999999999988643     46789999987543 3345678899999999999999999999987  4678999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ||++++++|.+++...  .+++..+..++.|++.||.|||+.   +++|+||||+||+++.++.++|+|||+|+...
T Consensus       114 ~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  185 (318)
T 3lxp_A          114 MEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  185 (318)
T ss_dssp             ECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred             EecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence            9999999999999653  477888888999999999999998   99999999999999999999999999998654

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.95  E-value=6.7e-27  Score=175.20  Aligned_cols=141  Identities=26%  Similarity=0.340  Sum_probs=118.7

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhh--cCCCceeeeeceEEe----CCeEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR--THHRNLVRLLGYSLE----VSKKILV  102 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~----~~~~~lv  102 (183)
                      .+.+.+.||+|+||.||+|.. ++..+++|.+....   ......|.+++..  ++||||+++++++..    ....+++
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv   84 (301)
T 3q4u_A            9 DITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI   84 (301)
T ss_dssp             GCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             cEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence            466778999999999999987 57789999986542   2344556666655  789999999998754    2457899


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhh--------hCCCCCceecCCCCCCEEecCCCcccccceec
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH--------DECETQIIHCDIKPQNILMDENRCAKNFRLWI  174 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh--------~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~  174 (183)
                      |||+++++|.+++..  ..+++.....++.|++.||.|||        +.   +++|+||||+||+++.++.+||+|||+
T Consensus        85 ~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~  159 (301)
T 3q4u_A           85 THYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGL  159 (301)
T ss_dssp             ECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             hhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence            999999999999943  45778888899999999999999        76   999999999999999999999999999


Q ss_pred             cccc
Q 048219          175 GKVD  178 (183)
Q Consensus       175 a~~~  178 (183)
                      |+..
T Consensus       160 a~~~  163 (301)
T 3q4u_A          160 AVMH  163 (301)
T ss_dssp             CEEE
T ss_pred             eeec
Confidence            9754

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.95  E-value=1e-26  Score=176.68  Aligned_cols=138  Identities=25%  Similarity=0.331  Sum_probs=121.1

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      +.||+|+||.||+|... ++..+++|.+.+.   ......+|+.++..+. ||||+++++++.+....+++||++++++|
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   93 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL   93 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence            57999999999999976 5788999998754   2345678999999997 99999999999999999999999999999


Q ss_pred             HHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC---cccccceeccccc
Q 048219          112 ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR---CAKNFRLWIGKVD  178 (183)
Q Consensus       112 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~---~~~i~dfg~a~~~  178 (183)
                      .+.+... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++   .++|+|||+|+..
T Consensus        94 ~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~  159 (325)
T 3kn6_A           94 FERIKKK-KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK  159 (325)
T ss_dssp             HHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred             HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence            9998764 4577888889999999999999998   999999999999998765   7999999999854

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.95  E-value=3.3e-27  Score=181.32  Aligned_cols=155  Identities=21%  Similarity=0.297  Sum_probs=129.6

Q ss_pred             eCHHHHHHHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-----CCceeeeeceE
Q 048219           20 FSYAELKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-----HRNLVRLLGYS   93 (183)
Q Consensus        20 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-----h~~i~~~~~~~   93 (183)
                      ...+.+....|.+.+.||+|+||.||+|... ++..+++|.+... .........|+.+++.+.     |+||+++++++
T Consensus        27 ~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~  105 (360)
T 3llt_A           27 WKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKF  105 (360)
T ss_dssp             CCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEE
T ss_pred             eecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeeccccee
Confidence            3333333456777889999999999999975 5788999998643 233445677899998886     99999999999


Q ss_pred             EeCCeEEEEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC---------
Q 048219           94 LEVSKKILVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE---------  163 (183)
Q Consensus        94 ~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~---------  163 (183)
                      ...+..+++||++ +++|.+++.... ..++...+..++.|++.||.|||+.   +|+|+||||+||+++.         
T Consensus       106 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~  181 (360)
T 3llt_A          106 MYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLIT  181 (360)
T ss_dssp             EETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEE
T ss_pred             eECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccc
Confidence            9999999999999 889999997644 3477888888999999999999998   9999999999999975         


Q ss_pred             ----------------CCcccccceecccccc
Q 048219          164 ----------------NRCAKNFRLWIGKVDE  179 (183)
Q Consensus       164 ----------------~~~~~i~dfg~a~~~~  179 (183)
                                      ++.+||+|||+|+...
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~  213 (360)
T 3llt_A          182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKS  213 (360)
T ss_dssp             EECTTTCCEEEEEEESCCCEEECCCTTCEETT
T ss_pred             hhcccccccccccccCCCCEEEEeccCceecC
Confidence                            7889999999998543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.95  E-value=1.2e-27  Score=181.69  Aligned_cols=146  Identities=25%  Similarity=0.350  Sum_probs=124.5

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHH-HHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      |.+.+.||+|+||.||+|... ++..+++|.+....... ...+.+|+.+++.++||||+++++++.+.+..+++||+++
T Consensus         4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   83 (324)
T 3mtl_A            4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD   83 (324)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence            556788999999999999976 57889999886432211 1234579999999999999999999999999999999997


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                       +++.+++......+++..+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||+|+...
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  151 (324)
T 3mtl_A           84 -KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKS  151 (324)
T ss_dssp             -EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-
T ss_pred             -cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCccccccc
Confidence             589998877666788888888999999999999998   99999999999999999999999999998553

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.95  E-value=1.2e-26  Score=172.43  Aligned_cols=149  Identities=25%  Similarity=0.274  Sum_probs=127.1

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      ..+.+.+.||+|+||.||+|... ++..+++|.+...  .......+.+|+..+..+ +||||+++++++.+.+..+++|
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            45677789999999999999976 6889999988653  233456678899999888 8999999999999999999999


Q ss_pred             eccCCCCHHHHHhcC---CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC----------------
Q 048219          104 EYMSNGSLADILFNA---EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN----------------  164 (183)
Q Consensus       104 e~~~~~~l~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~----------------  164 (183)
                      |++++++|.+++...   ...+++..+..++.|++.||.|||++   +++|+||||+||+++.+                
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~  167 (289)
T 1x8b_A           91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA  167 (289)
T ss_dssp             ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------------------
T ss_pred             EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence            999999999998653   14567888889999999999999998   99999999999999844                


Q ss_pred             ---Ccccccceecccccc
Q 048219          165 ---RCAKNFRLWIGKVDE  179 (183)
Q Consensus       165 ---~~~~i~dfg~a~~~~  179 (183)
                         ..++|+|||.|....
T Consensus       168 ~~~~~~kl~Dfg~~~~~~  185 (289)
T 1x8b_A          168 SNKVMFKIGDLGHVTRIS  185 (289)
T ss_dssp             --CCCEEECCCTTCEETT
T ss_pred             CCceEEEEcccccccccC
Confidence               478999999998654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.95  E-value=4.8e-27  Score=191.92  Aligned_cols=140  Identities=21%  Similarity=0.346  Sum_probs=123.6

Q ss_pred             ccCcCcCceEEEEEEc---CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           35 KVGRGSSGTVYKGAMI---NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~---~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      .||+|+||.||+|...   .+..||+|.+.... ......+.+|+.+++.++||||+++++++.. +..++||||+++++
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            6899999999999864   35679999987542 2345678899999999999999999999875 56899999999999


Q ss_pred             HHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       111 l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |.+++......+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~  486 (613)
T 2ozo_A          422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKAL  486 (613)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred             HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence            9999976556688888899999999999999998   9999999999999999999999999999865

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.95  E-value=1.4e-27  Score=192.32  Aligned_cols=148  Identities=28%  Similarity=0.382  Sum_probs=128.2

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      ....+.+.+.||+|+||.||+|....+..+++|.+.... .....+.+|+.+++.++|+||+++++++.. ...++||||
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~  342 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  342 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence            334566778999999999999998887889999987542 224568899999999999999999998765 678999999


Q ss_pred             cCCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++... ...+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  413 (535)
T 2h8h_A          343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLI  413 (535)
T ss_dssp             CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred             hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence            9999999999642 24477888889999999999999998   9999999999999999999999999999865

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.95  E-value=1.6e-27  Score=179.68  Aligned_cols=151  Identities=23%  Similarity=0.342  Sum_probs=127.2

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeC
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEV   96 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   96 (183)
                      +....+.+.+.||+|+||.||+|...      +++.+++|.+.... ......+.+|+.++..+ +||||+++++++...
T Consensus        24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  103 (316)
T 2xir_A           24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP  103 (316)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence            33456777889999999999999742      35789999987543 23345788999999999 689999999998765


Q ss_pred             C-eEEEEEeccCCCCHHHHHhcCCCC---------------CChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEE
Q 048219           97 S-KKILVYEYMSNGSLADILFNAEKQ---------------PNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNIL  160 (183)
Q Consensus        97 ~-~~~lv~e~~~~~~l~~~l~~~~~~---------------~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil  160 (183)
                      + ..+++||++++++|.+++......               +++..+..++.|++.||.|||++   +++|+||||+||+
T Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil  180 (316)
T 2xir_A          104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL  180 (316)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEE
Confidence            4 589999999999999999764321               56778888999999999999998   9999999999999


Q ss_pred             ecCCCcccccceeccccc
Q 048219          161 MDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       161 ~~~~~~~~i~dfg~a~~~  178 (183)
                      ++.++.++|+|||+|+..
T Consensus       181 ~~~~~~~kl~Dfg~~~~~  198 (316)
T 2xir_A          181 LSEKNVVKICDFGLARDI  198 (316)
T ss_dssp             ECGGGCEEECCCGGGSCT
T ss_pred             ECCCCCEEECCCcccccc
Confidence            999999999999999854

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.94  E-value=7.8e-27  Score=176.15  Aligned_cols=145  Identities=25%  Similarity=0.361  Sum_probs=123.9

Q ss_pred             hchh-cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFK-EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~-~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      |.+. +.||+|+||.||+|... ++..+++|.+..........+.+|+.++.++ +||||+++++++.+.+..+++||++
T Consensus        14 y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   93 (316)
T 2ac3_A           14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM   93 (316)
T ss_dssp             CEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcC
Confidence            4443 57999999999999865 5788999998765434456788899999885 7999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc---ccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC---AKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~---~~i~dfg~a~~~  178 (183)
                      ++++|.+++... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.   +||+|||+++..
T Consensus        94 ~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~  164 (316)
T 2ac3_A           94 RGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI  164 (316)
T ss_dssp             TTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred             CCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence            999999998654 3467788888999999999999998   9999999999999998765   999999998754

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.94  E-value=5.5e-27  Score=179.79  Aligned_cols=143  Identities=24%  Similarity=0.365  Sum_probs=116.2

Q ss_pred             hchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      +.+.+.||+|+||.||+|.... +..+++|.+....  ....+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  132 (349)
T 2w4o_A           55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG  132 (349)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence            5566789999999999999764 6789999987542  334677899999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC---CCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE---NRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~---~~~~~i~dfg~a~~~  178 (183)
                      ++|.+.+... ..+++..+..++.|++.||.|||+.   +++|+||||+||+++.   ++.+||+|||+|+..
T Consensus       133 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~  201 (349)
T 2w4o_A          133 GELFDRIVEK-GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV  201 (349)
T ss_dssp             CBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred             CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence            9999988653 4467888888999999999999998   9999999999999975   789999999999865

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.94  E-value=8.5e-27  Score=185.82  Aligned_cols=149  Identities=23%  Similarity=0.338  Sum_probs=129.0

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      ...|.+.+.||+|+||.||+|... ++..+++|.+.+..  ......+.+|+.+++.++||||+++++++.+....+++|
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            356888899999999999999976 57889999986432  123456889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC---CCcccccceecccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE---NRCAKNFRLWIGKVDE  179 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~---~~~~~i~dfg~a~~~~  179 (183)
                      |++++++|.+.+... ..+++..+..++.|++.||.|||++   +|+|+||||+||+++.   ++.+||+|||+|+...
T Consensus       101 e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  175 (486)
T 3mwu_A          101 ELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (486)
T ss_dssp             CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred             EcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence            999999999888654 3577888889999999999999998   9999999999999954   4679999999998653

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.94  E-value=1.4e-26  Score=171.92  Aligned_cols=146  Identities=23%  Similarity=0.360  Sum_probs=126.8

Q ss_pred             HhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHH---HHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+.+.+.||+|+||.||+|.... +..+++|.+.+.....   ...+.+|+.+++.++||||+++++++.+.+..+++||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (279)
T 3fdn_A           10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE   89 (279)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEe
Confidence            35667889999999999998764 6689999886543221   3568889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++++.+.+... ..+++..+..++.|++.|+.|||++   +++|+||+|+||+++.++.++|+|||+|...
T Consensus        90 ~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A           90 YAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA  159 (279)
T ss_dssp             CCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred             cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence            99999999988654 3467788888999999999999998   9999999999999999999999999998654

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.94  E-value=4.4e-27  Score=179.48  Aligned_cols=148  Identities=27%  Similarity=0.321  Sum_probs=123.6

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-----hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-----DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      ..|.+.+.||+|+||.||+|... .+..+++|.+....     ......+.+|+.+++.++||||+++++++.+.+..++
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  105 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL  105 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence            45777889999999999999875 57789999886532     2234678899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcC---------------------------------------CCCCChHHHHHHHHHHHHHHHHhh
Q 048219          102 VYEYMSNGSLADILFNA---------------------------------------EKQPNWIERTGIARDIARGILYLH  142 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~~l~~lh  142 (183)
                      ||||+++++|.+++...                                       ...+++..+..++.|++.||.|||
T Consensus       106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  185 (345)
T 3hko_A          106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH  185 (345)
T ss_dssp             EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999988421                                       001134455678999999999999


Q ss_pred             hCCCCCceecCCCCCCEEecCCC--cccccceeccccc
Q 048219          143 DECETQIIHCDIKPQNILMDENR--CAKNFRLWIGKVD  178 (183)
Q Consensus       143 ~~~~~~i~H~dl~~~nil~~~~~--~~~i~dfg~a~~~  178 (183)
                      +.   +++|+||||+||+++.++  .+||+|||+|+..
T Consensus       186 ~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~  220 (345)
T 3hko_A          186 NQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEF  220 (345)
T ss_dssp             HT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEG
T ss_pred             HC---CccccCCChhhEEEecCCCceEEEeeccccccc
Confidence            98   999999999999998776  8999999999854

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.94  E-value=1.4e-26  Score=173.99  Aligned_cols=148  Identities=24%  Similarity=0.347  Sum_probs=126.9

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ..+.+.+.||+|+||.||++... +++.+++|.+..........+.+|+.++..++||||+++++++.+.+..+++||++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            45777889999999999999976 57889999987654444556889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe---cCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM---DENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~---~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++|.+.+... ..+++..+..++.|++.||.|||++   +++|+||+|+||++   +.++.++|+|||+++...
T Consensus        89 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A           89 SGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             CSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             CCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence            999999988653 3467788888999999999999998   99999999999999   677899999999998643

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.94  E-value=8.5e-27  Score=186.17  Aligned_cols=148  Identities=23%  Similarity=0.333  Sum_probs=123.8

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      ..|.+.+.||+|+||.||+|... .+..+++|.+.+..  ......+.+|+.+++.++||||+++++++.+....++|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            45778889999999999999976 57789999986542  1224568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC---Ccccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN---RCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~---~~~~i~dfg~a~~~~  179 (183)
                      |+++++|.+.+... ..+++..+..++.|++.||.|||++   +|+||||||+||+++..   +.+||+|||+|+...
T Consensus       117 ~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~  190 (494)
T 3lij_A          117 CYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE  190 (494)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred             cCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence            99999999888654 3467788888999999999999998   99999999999999764   459999999998653

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.94  E-value=1.5e-26  Score=176.23  Aligned_cols=146  Identities=20%  Similarity=0.229  Sum_probs=128.1

Q ss_pred             HhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||++.... +..+++|.+....   ......+..|+.+++.++|+||+++++++.+.+..+++||
T Consensus        42 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  121 (335)
T 2owb_A           42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE  121 (335)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEe
Confidence            46667899999999999999764 6788999876532   3345678889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++|.+++... ..+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+++..
T Consensus       122 ~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  191 (335)
T 2owb_A          122 LCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV  191 (335)
T ss_dssp             CCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence            99999999988653 4567888888999999999999998   9999999999999999999999999999754

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.94  E-value=1.1e-26  Score=173.18  Aligned_cols=146  Identities=26%  Similarity=0.454  Sum_probs=124.3

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH---H----HHHHHHHHHHHhhcCCCceeeeeceEEeCCeE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE---R----EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~---~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   99 (183)
                      ..+.+.+.||+|+||.||+|... ++..+++|.+......   .    ...+.+|+.+++.++|+||+++++++.+..  
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--   96 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--   96 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence            34667789999999999999975 5788999998542211   1    156889999999999999999999886554  


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCC--ceecCCCCCCEEecCCCc-----ccccce
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ--IIHCDIKPQNILMDENRC-----AKNFRL  172 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~--i~H~dl~~~nil~~~~~~-----~~i~df  172 (183)
                      +++||++++++|.+.+......+++.....++.|++.||.|||++   +  ++|+||||+||+++.++.     ++|+||
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df  173 (287)
T 4f0f_A           97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF  173 (287)
T ss_dssp             EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred             eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence            699999999999998877666788888899999999999999997   7  999999999999988776     999999


Q ss_pred             eccccc
Q 048219          173 WIGKVD  178 (183)
Q Consensus       173 g~a~~~  178 (183)
                      |+|+..
T Consensus       174 g~~~~~  179 (287)
T 4f0f_A          174 GLSQQS  179 (287)
T ss_dssp             TTCBCC
T ss_pred             Cccccc
Confidence            999754

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.94  E-value=2.8e-26  Score=172.71  Aligned_cols=148  Identities=19%  Similarity=0.298  Sum_probs=122.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch---hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV---LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+...   .......+.+|+.+++.++|+||+++++++...+..+++||
T Consensus        33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  112 (310)
T 2wqm_A           33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE  112 (310)
T ss_dssp             GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence            4677789999999999999875 5788999988642   23345678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          105 YMSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++++|.+++..   ....+++..+..++.|++.||.|||+.   +++|+||+|+||+++.++.++|+|||+++...
T Consensus       113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            9999999998864   235577888888999999999999998   99999999999999999999999999997643

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.94  E-value=1.1e-26  Score=180.26  Aligned_cols=145  Identities=23%  Similarity=0.344  Sum_probs=116.9

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCC--eEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVS--KKIL  101 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~--~~~l  101 (183)
                      ..|.+.+.||+|+||.||+|.+. ++..+|+|.+.+.  .......+.+|+.++..+. |+||+++++++...+  ..++
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l   88 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL   88 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred             CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence            35677789999999999999975 5788999988543  2334566788999999997 999999999997544  6899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |||+++ +++...+..  ..+++.....++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus        89 v~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  159 (388)
T 3oz6_A           89 VFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSF  159 (388)
T ss_dssp             EEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred             EecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence            999997 589888865  3567778888999999999999998   9999999999999999999999999999854

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.94  E-value=6.3e-27  Score=185.63  Aligned_cols=144  Identities=21%  Similarity=0.290  Sum_probs=119.4

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC------CeE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV------SKK   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~   99 (183)
                      +|.+.+.||+|+||.||+|... .+..+|+|.+.+.  .......+.+|+.+++.++||||+++++++...      ...
T Consensus        63 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~  142 (464)
T 3ttj_A           63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV  142 (464)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred             CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence            3556678999999999999876 4788999998754  233456788999999999999999999998654      357


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++||||+++ ++.+.+..   .+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus       143 ~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  215 (464)
T 3ttj_A          143 YLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  215 (464)
T ss_dssp             EEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred             EEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence            999999975 56666632   367788888999999999999998   99999999999999999999999999998654

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=4.2e-27  Score=180.08  Aligned_cols=147  Identities=27%  Similarity=0.315  Sum_probs=123.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHH-----HHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDER-----EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      ..|.+.+.||+|+||.||+|... ++..+++|.+.......     ...+.+|+.+++.++||||+++++++...+..++
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   89 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL   89 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred             cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence            45777789999999999999976 47889999986432211     2357789999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +||++++ ++.+.+......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        90 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (346)
T 1ua2_A           90 VFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF  162 (346)
T ss_dssp             EEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred             EEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence            9999975 88888866555577778888999999999999998   9999999999999999999999999999865

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.94  E-value=1.3e-26  Score=172.36  Aligned_cols=146  Identities=23%  Similarity=0.327  Sum_probs=125.9

Q ss_pred             HhchhcccCcCcCceEEEEEEcC----CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+.+.+.||+|+||.||+|....    +..+++|.+.... ......+.+|+.+++.++||||+++++++.. +..+++|
T Consensus        13 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~   91 (281)
T 3cc6_A           13 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIM   91 (281)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEE
T ss_pred             ceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEE
Confidence            46677899999999999998543    3458999987542 3445678899999999999999999998754 4578999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++++++|.+++......+++.....++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+..
T Consensus        92 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  163 (281)
T 3cc6_A           92 ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYI  163 (281)
T ss_dssp             ECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred             ecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccc
Confidence            99999999999976656678888888999999999999998   9999999999999999999999999999865

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.94  E-value=1.6e-27  Score=180.87  Aligned_cols=146  Identities=23%  Similarity=0.298  Sum_probs=121.4

Q ss_pred             HhchhcccCcCcCceEEEEEEcC-CcE----EEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN-RQL----VAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~-~~~----~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      .+.+.+.||+|+||.||+|.... +..    +++|.+.... ......+.+|+.++..++||||+++++++. .+..+++
T Consensus        14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v   92 (325)
T 3kex_A           14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLV   92 (325)
T ss_dssp             TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEE
T ss_pred             HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEE
Confidence            45667889999999999998653 333    6777764322 112234667899999999999999999875 5678899


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||++++++|.+.+......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~  165 (325)
T 3kex_A           93 TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL  165 (325)
T ss_dssp             EECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred             EEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence            999999999999976545677778888999999999999998   9999999999999999999999999999865

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.94  E-value=1.1e-26  Score=177.93  Aligned_cols=146  Identities=23%  Similarity=0.318  Sum_probs=124.8

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEe--------CC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLE--------VS   97 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------~~   97 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+.....  .....+.+|+.+++.++|+||+++++++..        .+
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   97 (351)
T 3mi9_A           18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG   97 (351)
T ss_dssp             GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred             ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence            5777789999999999999975 578999998754321  123456789999999999999999999876        34


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219           98 KKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ..++|||++++ ++.+.+......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+.
T Consensus        98 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~  173 (351)
T 3mi9_A           98 SIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARA  173 (351)
T ss_dssp             EEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             eEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence            68999999975 88887766656688888999999999999999998   999999999999999999999999999975


Q ss_pred             c
Q 048219          178 D  178 (183)
Q Consensus       178 ~  178 (183)
                      .
T Consensus       174 ~  174 (351)
T 3mi9_A          174 F  174 (351)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.94  E-value=6.5e-27  Score=186.32  Aligned_cols=149  Identities=23%  Similarity=0.330  Sum_probs=129.6

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      ...|.+.+.||+|+||.||+|... ++..+++|.+.+..   ......+.+|+.+++.++||||+++++++.+.+..+++
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            346778889999999999999976 67889999985432   22346788999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe---cCCCcccccceecccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM---DENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~---~~~~~~~i~dfg~a~~~~  179 (183)
                      ||++.+++|.+.+... ..+++..+..++.|++.||.|||++   +|+|+||||+||++   +.++.+||+|||+|+...
T Consensus       105 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  180 (484)
T 3nyv_A          105 GEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE  180 (484)
T ss_dssp             ECCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred             EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence            9999999999988654 4577888888999999999999998   99999999999999   456889999999998653

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.94  E-value=1.4e-26  Score=185.29  Aligned_cols=148  Identities=24%  Similarity=0.324  Sum_probs=125.1

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh-------------HHHHHHHHHHHHHhhcCCCceeeeeceE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-------------EREREFQTEIKVIGRTHHRNLVRLLGYS   93 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~i~~~~~~~   93 (183)
                      ..|.+.+.||+|+||.||+|... ++..+++|.+.+...             .....+.+|+.+++.++||||+++++++
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~  115 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF  115 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            34667789999999999999976 467899999865321             1235688999999999999999999999


Q ss_pred             EeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC---ccccc
Q 048219           94 LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR---CAKNF  170 (183)
Q Consensus        94 ~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~---~~~i~  170 (183)
                      .+....++||||+++++|.+.+... ..+++..+..++.|++.||.|||+.   +|+|+||||+||+++.++   .+||+
T Consensus       116 ~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~  191 (504)
T 3q5i_A          116 EDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIV  191 (504)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred             EcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEE
Confidence            9999999999999999999888654 4577888889999999999999998   999999999999998775   69999


Q ss_pred             ceecccccc
Q 048219          171 RLWIGKVDE  179 (183)
Q Consensus       171 dfg~a~~~~  179 (183)
                      |||+|+...
T Consensus       192 Dfg~a~~~~  200 (504)
T 3q5i_A          192 DFGLSSFFS  200 (504)
T ss_dssp             CCTTCEECC
T ss_pred             ECCCCEEcC
Confidence            999998653

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.94  E-value=7.8e-27  Score=192.43  Aligned_cols=144  Identities=23%  Similarity=0.240  Sum_probs=125.5

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      +.+.+.||+|+||.||+|... +++.+|+|.+.+...   .....+..|..++..+ .|++|+++++++.+.+.+++|||
T Consensus       343 f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E  422 (674)
T 3pfq_A          343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME  422 (674)
T ss_dssp             EEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEE
T ss_pred             eEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEe
Confidence            555678999999999999976 477899999875421   2235577889999887 69999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      |+++++|...+... ..+++..+..++.|++.||.|||++   +|+||||||+|||++.++.+||+|||+|+.
T Consensus       423 ~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~  491 (674)
T 3pfq_A          423 YVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE  491 (674)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred             CcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence            99999999998764 3477888888999999999999998   999999999999999999999999999985

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.94  E-value=1.5e-27  Score=177.17  Aligned_cols=147  Identities=26%  Similarity=0.379  Sum_probs=126.8

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      ...+.+.+.||+|+||.||+|....+..+++|.+.... .....+.+|+.+++.++|+|++++++++. .+..+++||++
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   89 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM   89 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence            34567788999999999999998888889999886542 23456888999999999999999998875 55689999999


Q ss_pred             CCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|.+++.... ..+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  159 (279)
T 1qpc_A           90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI  159 (279)
T ss_dssp             TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccc
Confidence            9999999885432 2467788888999999999999998   9999999999999999999999999999865

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.94  E-value=2.4e-26  Score=171.91  Aligned_cols=146  Identities=20%  Similarity=0.229  Sum_probs=127.7

Q ss_pred             HhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||++.... +..+++|.+....   ......+..|+.+++.++|+||+++++++.+.+..+++||
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   95 (294)
T 2rku_A           16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE   95 (294)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEe
Confidence            45667899999999999999764 6788999876432   3345678889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++++.+++... ..+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        96 ~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  165 (294)
T 2rku_A           96 LCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV  165 (294)
T ss_dssp             CCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceec
Confidence            99999999988653 3567888888999999999999998   9999999999999999999999999999754

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.94  E-value=1.1e-26  Score=176.42  Aligned_cols=148  Identities=29%  Similarity=0.448  Sum_probs=124.9

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcE--EEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQL--VAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~--~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      ..+.+.+.||+|+||.||+|... ++..  +++|.+.... ......+.+|+.++..+ +||||+++++++...+..+++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            34667789999999999999865 3443  4888876432 23345688899999999 899999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcc
Q 048219          103 YEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCA  167 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~  167 (183)
                      ||++++++|.+++....               ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence            99999999999986543               3577888889999999999999998   99999999999999999999


Q ss_pred             cccceeccccc
Q 048219          168 KNFRLWIGKVD  178 (183)
Q Consensus       168 ~i~dfg~a~~~  178 (183)
                      +|+|||+++..
T Consensus       182 kL~Dfg~~~~~  192 (327)
T 1fvr_A          182 KIADFGLSRGQ  192 (327)
T ss_dssp             EECCTTCEESS
T ss_pred             EEcccCcCccc
Confidence            99999999743

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.94  E-value=1.5e-26  Score=175.25  Aligned_cols=147  Identities=23%  Similarity=0.311  Sum_probs=128.3

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH------HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE------REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (183)
                      ..|.+.+.||+|+||.||+|... ++..+++|.+......      ....+.+|+.++..++||||+++++++.+.+..+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            45778889999999999999976 5788999988653211      2456889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC----cccccceeccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR----CAKNFRLWIGK  176 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~----~~~i~dfg~a~  176 (183)
                      ++||++++++|.+++... ..+++..+..++.|++.||.|||++   +++|+||+|+||+++.++    .++|+|||+|+
T Consensus        92 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~  167 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (321)
T ss_dssp             EEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred             EEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence            999999999999998653 4567788888999999999999998   999999999999999887    79999999997


Q ss_pred             cc
Q 048219          177 VD  178 (183)
Q Consensus       177 ~~  178 (183)
                      ..
T Consensus       168 ~~  169 (321)
T 2a2a_A          168 EI  169 (321)
T ss_dssp             EC
T ss_pred             ec
Confidence            54

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.94  E-value=5.4e-27  Score=178.90  Aligned_cols=148  Identities=22%  Similarity=0.227  Sum_probs=126.7

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--------HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCe
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--------EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSK   98 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   98 (183)
                      ..|.+.+.||+|+||.||+|... ++..+++|.+.....        .....+.+|+.+++.++||||+++++++.+.+.
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            45777789999999999999965 578899998865321        112346679999999999999999999999999


Q ss_pred             EEEEEeccCCC-CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219           99 KILVYEYMSNG-SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus        99 ~~lv~e~~~~~-~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      .+++||++.++ ++.+++... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+.
T Consensus       104 ~~lv~e~~~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~  179 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAY  179 (335)
T ss_dssp             EEEEEECCTTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence            99999998766 999988654 3577888888999999999999998   999999999999999999999999999986


Q ss_pred             cc
Q 048219          178 DE  179 (183)
Q Consensus       178 ~~  179 (183)
                      ..
T Consensus       180 ~~  181 (335)
T 3dls_A          180 LE  181 (335)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.94  E-value=1.6e-26  Score=172.69  Aligned_cols=146  Identities=12%  Similarity=0.035  Sum_probs=125.5

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      ..+|.+.+.||+|+||.||+|.+.. ++.+++|.+....   ......+.+|+..+..++|+||+++++++...+..+++
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  109 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV  109 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence            3457788899999999999999864 7889999987542   23346788999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |||+++++|.+++...   ........++.|++.||.|+|++   +|+|+||||+||+++.++.++|++++.....
T Consensus       110 ~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~~~~  179 (286)
T 3uqc_A          110 AEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATMPDA  179 (286)
T ss_dssp             EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCCTTC
T ss_pred             EEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEeccccCCC
Confidence            9999999999998442   34556777899999999999998   9999999999999999999999987765433

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.94  E-value=1.6e-27  Score=178.59  Aligned_cols=148  Identities=24%  Similarity=0.326  Sum_probs=114.4

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      ..+.+.+.||+|+||.||+|... ++..+++|.+.... ......+.+|+.++..++||||+++++++...+..+++||+
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   94 (303)
T 2vwi_A           15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL   94 (303)
T ss_dssp             CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred             hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence            45677789999999999999854 57889999886432 23345678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhc-------CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFN-------AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~-------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++..       ....+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A           95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred             ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence            999999998864       234477888889999999999999998   9999999999999999999999999998754

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.94  E-value=1.2e-26  Score=171.61  Aligned_cols=147  Identities=31%  Similarity=0.375  Sum_probs=117.6

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhH----HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDE----REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+.+.+.||+|+||.||+|... +..+++|.+......    ....+.+|+.+++.++||||+++++++...+..+++||
T Consensus         8 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (271)
T 3dtc_A            8 ELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME   86 (271)
T ss_dssp             SEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred             heeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence            3566789999999999999875 678999988654322    23568889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC--------CCcccccceeccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE--------NRCAKNFRLWIGK  176 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~--------~~~~~i~dfg~a~  176 (183)
                      +++++++.+++..  ..+++.....++.|++.||.|||++...+++|+||||+||+++.        ++.++|+|||+|+
T Consensus        87 ~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~  164 (271)
T 3dtc_A           87 FARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR  164 (271)
T ss_dssp             CCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred             cCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence            9999999998853  45778888889999999999999981112999999999999986        6789999999998


Q ss_pred             cc
Q 048219          177 VD  178 (183)
Q Consensus       177 ~~  178 (183)
                      ..
T Consensus       165 ~~  166 (271)
T 3dtc_A          165 EW  166 (271)
T ss_dssp             --
T ss_pred             cc
Confidence            54

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.94  E-value=6.7e-27  Score=174.68  Aligned_cols=148  Identities=30%  Similarity=0.445  Sum_probs=120.5

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      +....+.+.+.||+|+||.||+|....  .+++|.+...  .......+.+|+.+++.++|+|+++++++. .....+++
T Consensus        21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv   97 (289)
T 3og7_A           21 IPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV   97 (289)
T ss_dssp             CCTTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred             cCccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence            334457777899999999999997644  4888887532  234456788999999999999999999854 56678999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||++++++|.+.+......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+..
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  170 (289)
T 3og7_A           98 TQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEK  170 (289)
T ss_dssp             EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred             EEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccc
Confidence            999999999999976666678888889999999999999998   9999999999999999999999999999754

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.94  E-value=9e-27  Score=177.06  Aligned_cols=149  Identities=21%  Similarity=0.354  Sum_probs=127.4

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcC------CcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCe
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSK   98 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   98 (183)
                      ...+.+.+.||+|+||.||+|....      ...+++|.+.... ......+.+|+.++..+ +||||+++++++...+.
T Consensus        45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  124 (333)
T 2i1m_A           45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP  124 (333)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence            3456677899999999999998653      2468999886543 33456788999999999 89999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcC-------------CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC
Q 048219           99 KILVYEYMSNGSLADILFNA-------------EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR  165 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~  165 (183)
                      .+++||++++++|.+++...             ...+++..+..++.|++.||.|||++   +++|+||||+||+++.++
T Consensus       125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~  201 (333)
T 2i1m_A          125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGH  201 (333)
T ss_dssp             CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGG
T ss_pred             eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCC
Confidence            99999999999999988642             23457788888999999999999998   999999999999999999


Q ss_pred             cccccceeccccc
Q 048219          166 CAKNFRLWIGKVD  178 (183)
Q Consensus       166 ~~~i~dfg~a~~~  178 (183)
                      .++|+|||+|+..
T Consensus       202 ~~kl~Dfg~~~~~  214 (333)
T 2i1m_A          202 VAKIGDFGLARDI  214 (333)
T ss_dssp             EEEBCCCGGGCCG
T ss_pred             eEEECcccccccc
Confidence            9999999999854

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.94  E-value=2e-26  Score=176.14  Aligned_cols=144  Identities=20%  Similarity=0.307  Sum_probs=124.9

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCC--CceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHH--RNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||++...++..+++|.+...  .......+.+|+.++..++|  +||+++++++......+++||
T Consensus        10 ~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e   89 (343)
T 3dbq_A           10 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME   89 (343)
T ss_dssp             EEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             EEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe
Confidence            36677899999999999999888889999987643  23344678899999999986  899999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                       +.+++|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+||+++ ++.+||+|||+|+..
T Consensus        90 -~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~  157 (343)
T 3dbq_A           90 -CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM  157 (343)
T ss_dssp             -CCSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred             -CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence             4578999999764 4567788888999999999999998   999999999999997 578999999999865

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.94  E-value=4.1e-26  Score=169.06  Aligned_cols=146  Identities=23%  Similarity=0.317  Sum_probs=128.3

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH---HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+......   ....+.+|+.+++.++||||+++++++...+..+++||
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   91 (276)
T 2h6d_A           12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME   91 (276)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence            4667789999999999999976 6888999998654221   23567889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++|.+++... ..+++.....++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||++...
T Consensus        92 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~  161 (276)
T 2h6d_A           92 YVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMM  161 (276)
T ss_dssp             CCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred             ccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccccccc
Confidence            99999999998654 3467788888999999999999998   9999999999999999999999999999865

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.94  E-value=9e-27  Score=179.38  Aligned_cols=146  Identities=15%  Similarity=0.129  Sum_probs=120.8

Q ss_pred             HhchhcccCcCcCceEEEEEEcC------CcEEEEEEccchhhHHH-----------HHHHHHHHHHhhcCCCceeeeec
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERE-----------REFQTEIKVIGRTHHRNLVRLLG   91 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~------~~~~~ik~~~~~~~~~~-----------~~~~~e~~~l~~l~h~~i~~~~~   91 (183)
                      .|.+.+.||+|+||.||+|....      ++.+++|.+........           .....|+..+..++|+||+++++
T Consensus        36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~  115 (364)
T 3op5_A           36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG  115 (364)
T ss_dssp             EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred             eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence            56777899999999999998764      36789998764321111           12345666778889999999999


Q ss_pred             eEEeC----CeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec--CCC
Q 048219           92 YSLEV----SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD--ENR  165 (183)
Q Consensus        92 ~~~~~----~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~--~~~  165 (183)
                      ++...    ...+++||++ +++|.+++......+++..+..++.|++.||.|||++   +|+||||||+||+++  .++
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~~  191 (364)
T 3op5_A          116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPD  191 (364)
T ss_dssp             EEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCTT
T ss_pred             eeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCCC
Confidence            98764    4589999999 9999999987666788999999999999999999998   999999999999999  789


Q ss_pred             cccccceeccccc
Q 048219          166 CAKNFRLWIGKVD  178 (183)
Q Consensus       166 ~~~i~dfg~a~~~  178 (183)
                      .+||+|||+|+..
T Consensus       192 ~~kl~DFG~a~~~  204 (364)
T 3op5_A          192 QVYLVDYGLAYRY  204 (364)
T ss_dssp             CEEECCCTTCEES
T ss_pred             eEEEEECCcceec
Confidence            9999999999754

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.94  E-value=2.9e-26  Score=174.31  Aligned_cols=146  Identities=26%  Similarity=0.325  Sum_probs=124.7

Q ss_pred             HhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .|.+.+.||+|+||.||+|.... +..+++|.+....  ......+.+|+.+++.++||||+++++++...+..+++||+
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  105 (331)
T 4aaa_A           26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEF  105 (331)
T ss_dssp             GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEec
Confidence            46667899999999999999764 7889999875432  23345678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++..+... ...+++..+..++.|++.||.|||+.   +++|+||||+||+++.++.++|+|||+|+..
T Consensus       106 ~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  174 (331)
T 4aaa_A          106 VDHTILDDLELF-PNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL  174 (331)
T ss_dssp             CSEEHHHHHHHS-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred             CCcchHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceee
Confidence            998888776643 34577888888999999999999998   9999999999999999999999999999754

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.94  E-value=2.6e-26  Score=171.53  Aligned_cols=142  Identities=27%  Similarity=0.354  Sum_probs=122.9

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCCCHH
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA  112 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~  112 (183)
                      ..||+|+||.||+|... ++..+++|.+..........+.+|+.+++.++||||+++++++...+..+++||++++++|.
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  107 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS  107 (295)
T ss_dssp             CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred             EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence            37999999999999975 57789999987654445567889999999999999999999999999999999999999999


Q ss_pred             HHHhcCCC--CCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC-CCcccccceeccccc
Q 048219          113 DILFNAEK--QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE-NRCAKNFRLWIGKVD  178 (183)
Q Consensus       113 ~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~-~~~~~i~dfg~a~~~  178 (183)
                      +++.....  ..++..+..++.|++.||.|||++   +++|+||+|+||+++. ++.++|+|||+++..
T Consensus       108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~  173 (295)
T 2clq_A          108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL  173 (295)
T ss_dssp             HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEES
T ss_pred             HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeeccccccc
Confidence            99876432  345677777899999999999998   9999999999999997 789999999999754

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.94  E-value=3.3e-26  Score=172.57  Aligned_cols=147  Identities=24%  Similarity=0.345  Sum_probs=119.1

Q ss_pred             HhchhcccCcCcCceEEEEEEcC----CcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC-----
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS-----   97 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----   97 (183)
                      .+.+.+.||+|+||.||+|....    +..+++|.+...  .......+.+|+.+++.++||||+++++++...+     
T Consensus        35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~  114 (313)
T 3brb_A           35 LLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIP  114 (313)
T ss_dssp             GEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------
T ss_pred             HeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCc
Confidence            45666789999999999997542    457999998643  2334467889999999999999999999987654     


Q ss_pred             eEEEEEeccCCCCHHHHHhc-----CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccce
Q 048219           98 KKILVYEYMSNGSLADILFN-----AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL  172 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~df  172 (183)
                      ..+++||++++++|.+++..     ....+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+||
T Consensus       115 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Df  191 (313)
T 3brb_A          115 KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADF  191 (313)
T ss_dssp             CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSC
T ss_pred             ccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeec
Confidence            35899999999999998843     224577888889999999999999998   9999999999999999999999999


Q ss_pred             eccccc
Q 048219          173 WIGKVD  178 (183)
Q Consensus       173 g~a~~~  178 (183)
                      |+|+..
T Consensus       192 g~~~~~  197 (313)
T 3brb_A          192 GLSKKI  197 (313)
T ss_dssp             SCC---
T ss_pred             Ccceec
Confidence            999754

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.94  E-value=4e-26  Score=169.77  Aligned_cols=147  Identities=20%  Similarity=0.272  Sum_probs=126.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+....  ......+.+|+.+++.++||||+++++++...+..+++||+
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   86 (284)
T 3kk8_A            7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL   86 (284)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEec
Confidence            3566789999999999999976 47889999886432  33446688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc---ccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC---AKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~---~~i~dfg~a~~~~  179 (183)
                      ++++++.+.+... ..+++.....++.|++.||.|||+.   +++|+||+|+||+++.++.   ++|+|||+|....
T Consensus        87 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~  159 (284)
T 3kk8_A           87 VTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  159 (284)
T ss_dssp             CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence            9999998888654 3467888888999999999999998   9999999999999987655   9999999997543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.94  E-value=1.9e-26  Score=173.93  Aligned_cols=148  Identities=28%  Similarity=0.338  Sum_probs=124.9

Q ss_pred             HHHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           26 KKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        26 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      ....+.+.+.||+|+||.||+|... ++..+++|.+....  ....+.+|+.++..++||||+++++++...+..+++||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            3445667789999999999999976 47889999886532  23567889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++|.+++......+++..+..++.|++.||.|||+.   +++|+||+|+||+++.++.++|+|||++...
T Consensus       105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  175 (314)
T 3com_A          105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL  175 (314)
T ss_dssp             CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence            9999999999875455678888889999999999999998   9999999999999999999999999999754

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=3.8e-26  Score=172.24  Aligned_cols=147  Identities=21%  Similarity=0.269  Sum_probs=126.6

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      ..|.+.+.||+|+||.||+|... +++.+++|.+....   ......+.+|+.++..++||||+++++++...+..+++|
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM  113 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence            34677789999999999999976 57889999986542   223467889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++++++|.+++... ..+++..+..++.|++.||.|||+.   +++|+||+|+||+++.++.++|+|||+++..
T Consensus       114 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~  184 (309)
T 2h34_A          114 RLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASAT  184 (309)
T ss_dssp             ECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred             EecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence            999999999998653 3467888888999999999999998   9999999999999999999999999998754

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=1.4e-26  Score=178.73  Aligned_cols=144  Identities=20%  Similarity=0.286  Sum_probs=118.3

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC------eE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS------KK   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~   99 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+....  ......+.+|+.+++.++||||+++++++....      ..
T Consensus        26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~  105 (367)
T 1cm8_A           26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF  105 (367)
T ss_dssp             SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred             eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence            4666788999999999999975 58899999985432  233467889999999999999999999987653      45


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++||++ +++|.+++..  ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus       106 ~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  178 (367)
T 1cm8_A          106 YLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA  178 (367)
T ss_dssp             EEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence            9999999 7899998865  3567788888999999999999998   9999999999999999999999999999864

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.94  E-value=6.4e-27  Score=178.78  Aligned_cols=146  Identities=22%  Similarity=0.303  Sum_probs=127.9

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHH-----------------HHHHHHHHHHHhhcCCCceeeeec
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDER-----------------EREFQTEIKVIGRTHHRNLVRLLG   91 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~~i~~~~~   91 (183)
                      .|.+.+.||+|+||.||+|.. ++..+++|.+.......                 ...+.+|+.++..++||||+++++
T Consensus        32 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~  110 (348)
T 2pml_X           32 DYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEG  110 (348)
T ss_dssp             TEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSE
T ss_pred             ceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEE
Confidence            466778999999999999998 88899999986542211                 167889999999999999999999


Q ss_pred             eEEeCCeEEEEEeccCCCCHHHH------HhcC-CCCCChHHHHHHHHHHHHHHHHhhh-CCCCCceecCCCCCCEEecC
Q 048219           92 YSLEVSKKILVYEYMSNGSLADI------LFNA-EKQPNWIERTGIARDIARGILYLHD-ECETQIIHCDIKPQNILMDE  163 (183)
Q Consensus        92 ~~~~~~~~~lv~e~~~~~~l~~~------l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~~i~H~dl~~~nil~~~  163 (183)
                      ++...+..+++||++++++|.++      +... ...+++..+..++.|++.||.|||+ .   +++|+||+|+||+++.
T Consensus       111 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~  187 (348)
T 2pml_X          111 IITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDK  187 (348)
T ss_dssp             EEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECT
T ss_pred             EEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcC
Confidence            99999999999999999999987      5332 3567788888999999999999998 7   9999999999999999


Q ss_pred             CCcccccceeccccc
Q 048219          164 NRCAKNFRLWIGKVD  178 (183)
Q Consensus       164 ~~~~~i~dfg~a~~~  178 (183)
                      ++.++|+|||+++..
T Consensus       188 ~~~~kl~dfg~~~~~  202 (348)
T 2pml_X          188 NGRVKLSDFGESEYM  202 (348)
T ss_dssp             TSCEEECCCTTCEEC
T ss_pred             CCcEEEecccccccc
Confidence            999999999999864

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.94  E-value=2e-26  Score=176.97  Aligned_cols=146  Identities=20%  Similarity=0.262  Sum_probs=126.6

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch-hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV-LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+... .......+.+|+.+++.++|+||+++++++...+..+++|||+
T Consensus        34 ~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  113 (360)
T 3eqc_A           34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM  113 (360)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECC
Confidence            3555678999999999999976 5788999988654 2334567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ++++|.+++... ..+++.....++.|++.||.|||+.  .+++|+||||+||+++.++.++|+|||+|+.
T Consensus       114 ~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  181 (360)
T 3eqc_A          114 DGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ  181 (360)
T ss_dssp             TTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHH
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCcc
Confidence            999999998654 3467778888999999999999983  1899999999999999999999999999864

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.94  E-value=2.4e-26  Score=170.20  Aligned_cols=147  Identities=25%  Similarity=0.303  Sum_probs=128.5

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      ..+.+.+.||+|+||.||+|... ++..+++|.+.... ......+.+|+.+++.++|+||+++++++...+..+++||+
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            45777889999999999999976 57889999886432 23346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++++|.+++.. ...+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||++...
T Consensus        87 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  155 (276)
T 2yex_A           87 CSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVF  155 (276)
T ss_dssp             CTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence            999999988754 24567888888999999999999998   9999999999999999999999999999754

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.94  E-value=1.1e-26  Score=176.69  Aligned_cols=145  Identities=22%  Similarity=0.326  Sum_probs=121.6

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH--HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+......  ....+.+|+.+++.++||||+++++++.+....+++||+
T Consensus        35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  114 (329)
T 3gbz_A           35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY  114 (329)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEec
Confidence            5777789999999999999865 5788999998644322  234577899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec-----CCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD-----ENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~-----~~~~~~i~dfg~a~~~  178 (183)
                      +++ +|.+++.... .+++..+..++.|++.||.|||++   +|+|+||||+||+++     ..+.+||+|||+|+..
T Consensus       115 ~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~  187 (329)
T 3gbz_A          115 AEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF  187 (329)
T ss_dssp             CSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred             CCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence            974 9999886643 467888888999999999999998   999999999999995     4455999999999754

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=3.9e-27  Score=180.96  Aligned_cols=146  Identities=25%  Similarity=0.215  Sum_probs=125.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc----CCcEEEEEEccchh----hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVL----DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   99 (183)
                      .+.+.+.||+|+||.||++...    .+..+++|.+.+..    ......+..|+.++..+ .|+||+++++++...+..
T Consensus        55 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  134 (355)
T 1vzo_A           55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKL  134 (355)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEE
T ss_pred             ceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceE
Confidence            4667789999999999999873    57889999886432    11223456788899988 699999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|||+++++|.+++... ..+++..+..++.|++.||.|||+.   +|+|+||||+||+++.++.+||+|||+|+..
T Consensus       135 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~  209 (355)
T 1vzo_A          135 HLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF  209 (355)
T ss_dssp             EEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             EEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence            9999999999999998654 3467788888999999999999998   9999999999999999999999999999854

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.94  E-value=3e-26  Score=178.14  Aligned_cols=143  Identities=20%  Similarity=0.302  Sum_probs=123.9

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccch--hhHHHHHHHHHHHHHhhcC--CCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKV--LDEREREFQTEIKVIGRTH--HRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      |.+.+.||+|+||.||++....+..+++|.+...  .......+.+|+.++..+.  |+||+++++++...+..+++|| 
T Consensus        58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-  136 (390)
T 2zmd_A           58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-  136 (390)
T ss_dssp             EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-
T ss_pred             eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-
Confidence            6677899999999999999877889999988643  2344567889999999996  5999999999999999999999 


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +.+++|.+++.... .+++..+..++.|++.||.|||+.   +|+||||||+||+++ ++.+||+|||+|+..
T Consensus       137 ~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~  204 (390)
T 2zmd_A          137 CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM  204 (390)
T ss_dssp             CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC
T ss_pred             cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccc
Confidence            55789999987643 567777888999999999999998   999999999999995 588999999999865

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.94  E-value=8.4e-26  Score=170.08  Aligned_cols=152  Identities=24%  Similarity=0.313  Sum_probs=120.5

Q ss_pred             HHHHHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh-----HHHHHHHHHHHHHhhc---CCCceeeeeceEE
Q 048219           24 ELKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-----EREREFQTEIKVIGRT---HHRNLVRLLGYSL   94 (183)
Q Consensus        24 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-----~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~   94 (183)
                      ++...+|.+.+.||+|+||.||+|.+. +++.+++|.+.....     .....+.+|+.+++.+   .||||+++++++.
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~   84 (308)
T 3g33_A            5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA   84 (308)
T ss_dssp             -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred             cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence            334456788899999999999999964 578899999863211     0112445566666555   5999999999998


Q ss_pred             eCC-----eEEEEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccc
Q 048219           95 EVS-----KKILVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK  168 (183)
Q Consensus        95 ~~~-----~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~  168 (183)
                      ...     ..+++||++. ++|.+++.... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k  160 (308)
T 3g33_A           85 TSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK  160 (308)
T ss_dssp             ECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred             ccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence            654     4789999996 59999887643 3378888889999999999999998   999999999999999999999


Q ss_pred             ccceecccccc
Q 048219          169 NFRLWIGKVDE  179 (183)
Q Consensus       169 i~dfg~a~~~~  179 (183)
                      |+|||+|+...
T Consensus       161 l~Dfg~a~~~~  171 (308)
T 3g33_A          161 LADFGLARIYS  171 (308)
T ss_dssp             ECSCSCTTTST
T ss_pred             EeeCccccccC
Confidence            99999998653

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.94  E-value=9.3e-27  Score=188.59  Aligned_cols=137  Identities=16%  Similarity=0.162  Sum_probs=106.4

Q ss_pred             cCcCcCceEEEEE-EcCCcEEEEEEccchh----------hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEE
Q 048219           36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVL----------DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        36 lg~g~~g~v~~~~-~~~~~~~~ik~~~~~~----------~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+.|++|.+..++ ..-++.+++|.+.+..          ....+.+.+|+++|+++ .|+||+++++++++.+..||||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            4455555544444 3346678888875421          22345689999999999 6999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ||++|++|.+.+.... .++.   ..|+.||+.||.|+|++   +|+||||||+|||++.++.+||+|||+|+...
T Consensus       322 Eyv~G~~L~d~i~~~~-~l~~---~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~  390 (569)
T 4azs_A          322 EKLPGRLLSDMLAAGE-EIDR---EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTP  390 (569)
T ss_dssp             ECCCSEEHHHHHHTTC-CCCH---HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred             ecCCCCcHHHHHHhCC-CCCH---HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence            9999999999997643 3443   24789999999999998   99999999999999999999999999998653

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.94  E-value=3e-26  Score=170.60  Aligned_cols=146  Identities=24%  Similarity=0.339  Sum_probs=127.2

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH---HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+......   ....+.+|+.++..++|+|++++++++.+.+..+++||
T Consensus        15 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   94 (284)
T 2vgo_A           15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE   94 (284)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEE
Confidence            4667789999999999999976 4678999988654222   13568889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++|.+.+... ..+++.....++.|++.|+.|||++   +++|+||+|+||+++.++.++|+|||++...
T Consensus        95 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~  164 (284)
T 2vgo_A           95 FAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHA  164 (284)
T ss_dssp             CCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             eCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccC
Confidence            99999999988654 3467788888999999999999998   9999999999999999999999999998644

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.94  E-value=6.1e-26  Score=169.40  Aligned_cols=146  Identities=28%  Similarity=0.348  Sum_probs=123.8

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEe----CCeEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLE----VSKKILV  102 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv  102 (183)
                      +.+.+.||+|+||.||+|... .+..+++|.+...  .......+.+|+.+++.++||||+++++++..    ....+++
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  107 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence            456678999999999999876 4678888887643  23445678899999999999999999999875    3458999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCC--ceecCCCCCCEEec-CCCcccccceecccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ--IIHCDIKPQNILMD-ENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~--i~H~dl~~~nil~~-~~~~~~i~dfg~a~~~~  179 (183)
                      ||++++++|.+++... ..+++..+..++.|++.||.|||+.   +  ++|+||+|+||+++ .++.++|+|||+|....
T Consensus       108 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~  183 (290)
T 1t4h_A          108 TELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence            9999999999998653 3467788888999999999999997   7  99999999999998 78899999999997543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.94  E-value=1.6e-26  Score=181.17  Aligned_cols=148  Identities=21%  Similarity=0.272  Sum_probs=122.7

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--------HHHHHHHHHHHHHhhcCCCceeeeeceEEeCC
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--------EREREFQTEIKVIGRTHHRNLVRLLGYSLEVS   97 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   97 (183)
                      ...|.+.+.||+|+||.||+|... ++..+|+|.+.+...        .....+.+|+.+++.++||||+++++++. ..
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~  212 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AE  212 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SS
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence            345777789999999999999976 478899999865321        11124778999999999999999999874 55


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC---cccccceec
Q 048219           98 KKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR---CAKNFRLWI  174 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~---~~~i~dfg~  174 (183)
                      ..+++||++++++|.+.+... ..+++.....++.|++.||.|||++   +++|+||||+||+++..+   .+||+|||+
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG~  288 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH  288 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred             ceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeeccc
Confidence            689999999999998877543 4577888888999999999999998   999999999999997544   599999999


Q ss_pred             ccccc
Q 048219          175 GKVDE  179 (183)
Q Consensus       175 a~~~~  179 (183)
                      |+...
T Consensus       289 a~~~~  293 (419)
T 3i6u_A          289 SKILG  293 (419)
T ss_dssp             TTSCC
T ss_pred             ceecC
Confidence            98753

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.94  E-value=8e-27  Score=179.30  Aligned_cols=146  Identities=23%  Similarity=0.292  Sum_probs=122.5

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchh-----------hHHHHHHHHHHHHHhhcCCCceeeeeceEEe--
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVL-----------DEREREFQTEIKVIGRTHHRNLVRLLGYSLE--   95 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--   95 (183)
                      .|.+.+.||+|+||.||+|....+..+++|.+....           ......+.+|+.++..++||||+++++++..  
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  102 (362)
T 3pg1_A           23 PYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFE  102 (362)
T ss_dssp             SCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECC
T ss_pred             ceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEecc
Confidence            355668999999999999998889999999875421           1223678899999999999999999999854  


Q ss_pred             ---CCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccce
Q 048219           96 ---VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL  172 (183)
Q Consensus        96 ---~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~df  172 (183)
                         ....+++||+++ +++.+.+......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+||
T Consensus       103 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df  178 (362)
T 3pg1_A          103 EPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDF  178 (362)
T ss_dssp             TTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCT
T ss_pred             CCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEEEec
Confidence               236799999997 588888876655678888889999999999999998   9999999999999999999999999


Q ss_pred             eccccc
Q 048219          173 WIGKVD  178 (183)
Q Consensus       173 g~a~~~  178 (183)
                      |+|+..
T Consensus       179 g~~~~~  184 (362)
T 3pg1_A          179 NLARED  184 (362)
T ss_dssp             TC----
T ss_pred             Cccccc
Confidence            999743

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.94  E-value=3.4e-26  Score=170.10  Aligned_cols=147  Identities=24%  Similarity=0.312  Sum_probs=128.1

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH------HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE------REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (183)
                      ..+.+.+.||+|+||.||+|... ++..+++|.+......      ....+.+|+.+++.++||||+++++++...+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            45778889999999999999976 5788999987653211      2456889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC----cccccceeccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR----CAKNFRLWIGK  176 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~----~~~i~dfg~a~  176 (183)
                      ++||++++++|.+++... ..+++..+..++.|++.||.|||+.   +++|+||+|+||+++.++    .++|+|||+++
T Consensus        85 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~  160 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH  160 (283)
T ss_dssp             EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence            999999999999998653 3567888889999999999999998   999999999999998876    79999999997


Q ss_pred             cc
Q 048219          177 VD  178 (183)
Q Consensus       177 ~~  178 (183)
                      ..
T Consensus       161 ~~  162 (283)
T 3bhy_A          161 KI  162 (283)
T ss_dssp             EC
T ss_pred             ec
Confidence            54

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.94  E-value=5.4e-26  Score=175.24  Aligned_cols=146  Identities=25%  Similarity=0.330  Sum_probs=126.6

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--------hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--------DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSK   98 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--------~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   98 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+....        ......+..|+.++..+ +||||+++++++...+.
T Consensus        95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  174 (365)
T 2y7j_A           95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF  174 (365)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred             hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence            3556678999999999999986 58899999875422        12235678899999998 79999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219           99 KILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      .+++|||+++++|.+++... ..+++..+..++.|++.||.|||+.   +++|+||+|+||+++.++.++|+|||++...
T Consensus       175 ~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~  250 (365)
T 2y7j_A          175 MFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHL  250 (365)
T ss_dssp             EEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence            99999999999999988653 3567888888999999999999998   9999999999999999999999999998754

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.94  E-value=1.4e-26  Score=175.94  Aligned_cols=147  Identities=25%  Similarity=0.349  Sum_probs=121.8

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-Cc----EEEEEEccch-hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-RQ----LVAVNRLEKV-LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-~~----~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      ..+.+.+.||+|+||.||+|.... +.    .+++|.+... .......+.+|+.++..++||||+++++++.... .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence            346677899999999999998653 33    3566766432 2233467889999999999999999999987654 788


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++++++.+++......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus        94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~  167 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence            9999999999999987666788888899999999999999998   9999999999999999999999999999865

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.94  E-value=6.2e-26  Score=169.83  Aligned_cols=146  Identities=25%  Similarity=0.272  Sum_probs=126.9

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---------hHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---------DEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVS   97 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---------~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~   97 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+....         ......+.+|+.+++.+. ||||+++++++...+
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (298)
T 1phk_A           18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT   97 (298)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             ccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC
Confidence            4666788999999999999976 57889999985421         122356788999999995 999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219           98 KKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ..+++||++++++|.+++... ..+++.....++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||++..
T Consensus        98 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~  173 (298)
T 1phk_A           98 FFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQ  173 (298)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             eEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchhh
Confidence            999999999999999998653 3567888888999999999999998   999999999999999999999999999975


Q ss_pred             c
Q 048219          178 D  178 (183)
Q Consensus       178 ~  178 (183)
                      .
T Consensus       174 ~  174 (298)
T 1phk_A          174 L  174 (298)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.94  E-value=4.4e-26  Score=187.46  Aligned_cols=148  Identities=20%  Similarity=0.306  Sum_probs=127.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC----CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      ..+.+.+.||+|+||.||+|....    +..+++|.+.... ......+.+|+.+++.++||||+++++++ ..+..+++
T Consensus       390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~~~~lv  468 (656)
T 2j0j_A          390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWII  468 (656)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSCEEE
T ss_pred             ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-ecCceEEE
Confidence            345667789999999999998653    4568899876533 33346788999999999999999999987 45678999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |||+++++|.+++......+++..+..++.|++.||.|||++   +++||||||+||+++.++.+||+|||+|+...
T Consensus       469 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~  542 (656)
T 2j0j_A          469 MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME  542 (656)
T ss_dssp             EECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred             EEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence            999999999999976655678888888999999999999998   99999999999999999999999999998653

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.94  E-value=2.9e-26  Score=175.34  Aligned_cols=143  Identities=24%  Similarity=0.275  Sum_probs=121.8

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEec
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      ..|.+.+.||+|+||.||+|... ++..+++|.+.+...    ...+|++++.++ +||||+++++++.+....+++|||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~   97 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL   97 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence            45777789999999999999976 578899999865422    234577778777 799999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC----Ccccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN----RCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~----~~~~i~dfg~a~~~  178 (183)
                      +++++|.+.+... ..+++.....++.|++.||.|||++   +|+||||||+||++...    +.+||+|||+|+..
T Consensus        98 ~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A           98 MKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL  170 (342)
T ss_dssp             CCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence            9999999988654 4577888889999999999999998   99999999999998543    35999999999854

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.94  E-value=3.6e-26  Score=173.51  Aligned_cols=148  Identities=19%  Similarity=0.253  Sum_probs=126.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEE--------eCC
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSL--------EVS   97 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~--------~~~   97 (183)
                      ..+.+.+.||+|+||.||+|... .+..+++|.+..........+.+|+.++..+. ||||+++++++.        ...
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~  107 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA  107 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred             ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence            35677789999999999999975 57889999886655556677889999999996 999999999984        234


Q ss_pred             eEEEEEeccCCCCHHHHHhc--CCCCCChHHHHHHHHHHHHHHHHhhhCCCCC--ceecCCCCCCEEecCCCccccccee
Q 048219           98 KKILVYEYMSNGSLADILFN--AEKQPNWIERTGIARDIARGILYLHDECETQ--IIHCDIKPQNILMDENRCAKNFRLW  173 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~--i~H~dl~~~nil~~~~~~~~i~dfg  173 (183)
                      ..+++||++. ++|.+++..  ....+++..+..++.|++.||.|||+.   +  ++|+||||+||+++.++.+||+|||
T Consensus       108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg  183 (337)
T 3ll6_A          108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFG  183 (337)
T ss_dssp             EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred             eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCc
Confidence            5789999996 688888754  334578888899999999999999997   7  9999999999999999999999999


Q ss_pred             cccccc
Q 048219          174 IGKVDE  179 (183)
Q Consensus       174 ~a~~~~  179 (183)
                      +|+...
T Consensus       184 ~~~~~~  189 (337)
T 3ll6_A          184 SATTIS  189 (337)
T ss_dssp             TCBCCS
T ss_pred             cceecc
Confidence            998653

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.94  E-value=2.9e-27  Score=182.97  Aligned_cols=146  Identities=10%  Similarity=0.083  Sum_probs=115.0

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccch---hhHHHHHHHHHHH---HHhhcCCCceeeee-------ceEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV---LDEREREFQTEIK---VIGRTHHRNLVRLL-------GYSLE   95 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~---~~~~~~~~~~e~~---~l~~l~h~~i~~~~-------~~~~~   95 (183)
                      +.+.+.||+|+||.||+|... ++..+++|.+...   .......+.+|+.   .++.++||||++++       +++..
T Consensus        75 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~  154 (377)
T 3byv_A           75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD  154 (377)
T ss_dssp             EEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEEC
T ss_pred             EEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhc
Confidence            344578999999999999964 5889999998632   2234467888994   55566899999988       55544


Q ss_pred             CC-----------------eEEEEEeccCCCCHHHHHhcCCCCCC------hHHHHHHHHHHHHHHHHhhhCCCCCceec
Q 048219           96 VS-----------------KKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLHDECETQIIHC  152 (183)
Q Consensus        96 ~~-----------------~~~lv~e~~~~~~l~~~l~~~~~~~~------~~~~~~i~~~i~~~l~~lh~~~~~~i~H~  152 (183)
                      .+                 ..+++||++ +|+|.+++........      +..+..++.|++.||.|||++   +|+|+
T Consensus       155 ~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHr  230 (377)
T 3byv_A          155 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHT  230 (377)
T ss_dssp             TTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred             cCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence            43                 278999999 5799999875322222      356667899999999999998   99999


Q ss_pred             CCCCCCEEecCCCcccccceecccccc
Q 048219          153 DIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       153 dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ||||+||+++.++.+||+|||+|+...
T Consensus       231 Dikp~NIll~~~~~~kL~DFG~a~~~~  257 (377)
T 3byv_A          231 YLRPVDIVLDQRGGVFLTGFEHLVRDG  257 (377)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETT
T ss_pred             CCCHHHEEEcCCCCEEEEechhheecC
Confidence            999999999999999999999998543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.94  E-value=5.8e-26  Score=170.53  Aligned_cols=145  Identities=28%  Similarity=0.397  Sum_probs=127.4

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+.... ......+.+|+.++..++|+|++++++++......+++||++
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  102 (303)
T 3a7i_A           23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL  102 (303)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence            3566788999999999999865 57889999986432 223467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|.+++..  ..+++..+..++.|++.||.|||+.   +++|+||+|+||+++.++.++|+|||+|...
T Consensus       103 ~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~  169 (303)
T 3a7i_A          103 GGGSALDLLEP--GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL  169 (303)
T ss_dssp             TTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceec
Confidence            99999998854  4577888888999999999999998   9999999999999999999999999999754

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.94  E-value=2.2e-26  Score=171.66  Aligned_cols=147  Identities=28%  Similarity=0.313  Sum_probs=118.8

Q ss_pred             HHhchhcccCcCcCceEEEEEEc--CC--cEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI--NR--QLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~--~~--~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (183)
                      ..+.+.+.||+|+||.||+|...  .+  ..+++|.+....   ......+.+|+.++..++||||+++++++.... .+
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   96 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK   96 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence            35677789999999999999853  22  358898876432   234467889999999999999999999987654 88


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|++++++|.+.+......+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccc
Confidence            99999999999999876545577888888999999999999998   9999999999999999999999999999765

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.94  E-value=7.4e-26  Score=172.41  Aligned_cols=147  Identities=25%  Similarity=0.300  Sum_probs=126.0

Q ss_pred             HHHHHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhh--cCCCceeeeeceEEeCC---
Q 048219           23 AELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR--THHRNLVRLLGYSLEVS---   97 (183)
Q Consensus        23 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~---   97 (183)
                      .......+.+.+.||+|+||.||+|.. +++.+++|.+....   ...+..|.+++..  ++||||+++++++....   
T Consensus        37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~  112 (342)
T 1b6c_B           37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW  112 (342)
T ss_dssp             HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred             cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence            344456678889999999999999987 47889999986532   3456678888876  78999999999998765   


Q ss_pred             -eEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhh--------hCCCCCceecCCCCCCEEecCCCccc
Q 048219           98 -KKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH--------DECETQIIHCDIKPQNILMDENRCAK  168 (183)
Q Consensus        98 -~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh--------~~~~~~i~H~dl~~~nil~~~~~~~~  168 (183)
                       ..+++||++++++|.+++...  .+++.....++.|++.||.|||        +.   +++|+||||+||+++.++.+|
T Consensus       113 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~k  187 (342)
T 1b6c_B          113 TQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC  187 (342)
T ss_dssp             CCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEE
T ss_pred             ceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEE
Confidence             789999999999999999653  4678888889999999999999        66   999999999999999999999


Q ss_pred             ccceeccccc
Q 048219          169 NFRLWIGKVD  178 (183)
Q Consensus       169 i~dfg~a~~~  178 (183)
                      |+|||+|+..
T Consensus       188 L~Dfg~~~~~  197 (342)
T 1b6c_B          188 IADLGLAVRH  197 (342)
T ss_dssp             ECCCTTCEEE
T ss_pred             EEECCCceec
Confidence            9999999754

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.94  E-value=3.6e-26  Score=173.47  Aligned_cols=150  Identities=29%  Similarity=0.450  Sum_probs=124.5

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS   97 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   97 (183)
                      +....+.+.+.||+|+||.||+|...      .+..+++|.+.... ......+.+|+.+++.++||||+++++++....
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  106 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence            34456778889999999999999832      45689999986432 334457888999999999999999999999988


Q ss_pred             eEEEEEeccCCCCHHHHHhcCC------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC---Cccc
Q 048219           98 KKILVYEYMSNGSLADILFNAE------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN---RCAK  168 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~---~~~~  168 (183)
                      ..+++||++++++|.+++....      ..+++..+..++.|++.||.|||++   +++|+||+|+||+++.+   ..++
T Consensus       107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~k  183 (327)
T 2yfx_A          107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK  183 (327)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred             CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEE
Confidence            9999999999999999997643      3367778888999999999999998   99999999999999844   4699


Q ss_pred             ccceecccc
Q 048219          169 NFRLWIGKV  177 (183)
Q Consensus       169 i~dfg~a~~  177 (183)
                      |+|||+|+.
T Consensus       184 l~Dfg~~~~  192 (327)
T 2yfx_A          184 IGDFGMARD  192 (327)
T ss_dssp             ECCCHHHHH
T ss_pred             ECccccccc
Confidence            999999874

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.94  E-value=3.8e-26  Score=168.56  Aligned_cols=145  Identities=22%  Similarity=0.323  Sum_probs=124.9

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC--CeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV--SKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e  104 (183)
                      .+.+.+.||+|+||.||+|... +..+++|.+....  ......+.+|+.+++.++||||+++++++.+.  +..+++||
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   89 (271)
T 3kmu_A           11 QLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH   89 (271)
T ss_dssp             GCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred             HhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeec
Confidence            4667789999999999999875 6778999886432  34456788999999999999999999999876  77899999


Q ss_pred             ccCCCCHHHHHhcCCC-CCChHHHHHHHHHHHHHHHHhhhCCCCC--ceecCCCCCCEEecCCCcccccceecccc
Q 048219          105 YMSNGSLADILFNAEK-QPNWIERTGIARDIARGILYLHDECETQ--IIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~~~~--i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ++++++|.+++..... .+++..+..++.|++.||.|||+.   +  ++|+||||+||+++.++.+++.|||++..
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~  162 (271)
T 3kmu_A           90 WMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS  162 (271)
T ss_dssp             CCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred             ccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence            9999999999976543 478888899999999999999997   7  99999999999999999999888877654

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.94  E-value=6.1e-26  Score=171.12  Aligned_cols=144  Identities=23%  Similarity=0.332  Sum_probs=118.8

Q ss_pred             HhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEE-------------
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL-------------   94 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------------   94 (183)
                      +|.+.+.||+|+||.||+|.... ++.+++|.+..........+.+|+.+++.++|||++++++++.             
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~   91 (320)
T 2i6l_A           12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL   91 (320)
T ss_dssp             TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred             ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence            35667889999999999999774 7889999887655555677889999999999999999998873             


Q ss_pred             -eCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec-CCCcccccce
Q 048219           95 -EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD-ENRCAKNFRL  172 (183)
Q Consensus        95 -~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~-~~~~~~i~df  172 (183)
                       ..+..+++||+++ ++|.+++..  ..+++.....++.|++.||.|||++   +++|+||||+||+++ .++.+||+||
T Consensus        92 ~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Df  165 (320)
T 2i6l_A           92 TELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDF  165 (320)
T ss_dssp             CSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred             cccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccC
Confidence             3467899999997 599998854  4567788888999999999999998   999999999999998 4579999999


Q ss_pred             eccccc
Q 048219          173 WIGKVD  178 (183)
Q Consensus       173 g~a~~~  178 (183)
                      |+|+..
T Consensus       166 g~~~~~  171 (320)
T 2i6l_A          166 GLARIM  171 (320)
T ss_dssp             TTCBCC
T ss_pred             cccccc
Confidence            999865

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.94  E-value=2.4e-26  Score=188.36  Aligned_cols=139  Identities=24%  Similarity=0.336  Sum_probs=121.0

Q ss_pred             ccCcCcCceEEEEEEc---CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMI---NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~---~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .||+|+||.||+|.+.   .+..+|+|.++....  .....+.+|+.++..++|+||+++++++. ....++||||++++
T Consensus       376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~g  454 (635)
T 4fl3_A          376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELG  454 (635)
T ss_dssp             EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTE
T ss_pred             EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCCC
Confidence            6999999999999653   357899999875432  23467899999999999999999999886 45688999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       455 ~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~  519 (635)
T 4fl3_A          455 PLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL  519 (635)
T ss_dssp             EHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred             CHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence            999999653 4577888889999999999999998   9999999999999999999999999999854

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.94  E-value=3.9e-26  Score=169.64  Aligned_cols=145  Identities=19%  Similarity=0.282  Sum_probs=124.9

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEe----------
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE----------   95 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------   95 (183)
                      ...+.+.+.||+|+||.||+|... +++.+++|.+....    ..+.+|+.+++.++|||++++++++..          
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   85 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK   85 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence            345777789999999999999976 68889999986532    245679999999999999999998864          


Q ss_pred             ------CCeEEEEEeccCCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccc
Q 048219           96 ------VSKKILVYEYMSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK  168 (183)
Q Consensus        96 ------~~~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~  168 (183)
                            ....+++||++++++|.+++... ...+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~k  162 (284)
T 2a19_B           86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVK  162 (284)
T ss_dssp             ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred             cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEE
Confidence                  34578999999999999999653 24577888888999999999999998   999999999999999999999


Q ss_pred             ccceeccccc
Q 048219          169 NFRLWIGKVD  178 (183)
Q Consensus       169 i~dfg~a~~~  178 (183)
                      |+|||+|+..
T Consensus       163 l~Dfg~~~~~  172 (284)
T 2a19_B          163 IGDFGLVTSL  172 (284)
T ss_dssp             ECCCTTCEES
T ss_pred             ECcchhheec
Confidence            9999998754

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.94  E-value=7.2e-26  Score=171.79  Aligned_cols=140  Identities=21%  Similarity=0.335  Sum_probs=122.0

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEEe--CCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSLE--VSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~--~~~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+....   ...+.+|+.+++.++ |+||+++.+++.+  ....+++||
T Consensus        37 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e  113 (330)
T 3nsz_A           37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  113 (330)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred             ceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence            4566689999999999999865 57889999987532   356788999999997 9999999999987  567899999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC-cccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR-CAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~-~~~i~dfg~a~~~  178 (183)
                      +++++++.+++..    +++..+..++.|++.||.|||++   +++|+||||+||+++.++ .++|+|||+|+..
T Consensus       114 ~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~  181 (330)
T 3nsz_A          114 HVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  181 (330)
T ss_dssp             CCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             ccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence            9999999988743    66778888999999999999998   999999999999999776 8999999999854

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.94  E-value=4.2e-26  Score=170.66  Aligned_cols=145  Identities=18%  Similarity=0.250  Sum_probs=125.8

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+....  ....+.+|+..+..+ .|++++.+++++......+++||++
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   88 (298)
T 1csn_A           11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   88 (298)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence            4667789999999999999964 67889999875432  223567789999998 7999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc-----ccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC-----AKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~-----~~i~dfg~a~~~~  179 (183)
                       +++|.+++......+++..+..++.|++.||.|||++   +++|+||||+||+++.++.     ++|+|||+|+...
T Consensus        89 -~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~  162 (298)
T 1csn_A           89 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  162 (298)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             -CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence             8999999987666688889999999999999999998   9999999999999987765     9999999998653

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.94  E-value=4.2e-26  Score=169.25  Aligned_cols=147  Identities=17%  Similarity=0.271  Sum_probs=125.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEe--CCeEEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLE--VSKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~  103 (183)
                      .+.+.+.||+|+||.||++... +++.+++|.+...  .......+.+|+.+++.++||||+++++++..  ....+++|
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~   86 (279)
T 2w5a_A            7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM   86 (279)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEE
T ss_pred             heeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEE
Confidence            4566789999999999999976 5788999988643  23345678899999999999999999998854  56889999


Q ss_pred             eccCCCCHHHHHhcC---CCCCChHHHHHHHHHHHHHHHHhhhCCCCC-----ceecCCCCCCEEecCCCcccccceecc
Q 048219          104 EYMSNGSLADILFNA---EKQPNWIERTGIARDIARGILYLHDECETQ-----IIHCDIKPQNILMDENRCAKNFRLWIG  175 (183)
Q Consensus       104 e~~~~~~l~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~-----i~H~dl~~~nil~~~~~~~~i~dfg~a  175 (183)
                      |++++++|.+++...   ...+++..+..++.|++.||.|||+.   +     ++|+||+|+||+++.++.++|+|||++
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~  163 (279)
T 2w5a_A           87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA  163 (279)
T ss_dssp             ECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred             eCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence            999999999988653   23477888889999999999999997   6     999999999999999999999999999


Q ss_pred             ccc
Q 048219          176 KVD  178 (183)
Q Consensus       176 ~~~  178 (183)
                      +..
T Consensus       164 ~~~  166 (279)
T 2w5a_A          164 RIL  166 (279)
T ss_dssp             HHC
T ss_pred             eee
Confidence            754

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.94  E-value=5.5e-26  Score=177.16  Aligned_cols=138  Identities=22%  Similarity=0.292  Sum_probs=116.8

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHH-hhcCCCceeeeeceEEe----CCeEEEEEeccC
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVI-GRTHHRNLVRLLGYSLE----VSKKILVYEYMS  107 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~  107 (183)
                      +.||+|+||.||+|... ++..+++|.+...     ..+.+|+.++ +..+|+||+++++++..    ....++||||++
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~  142 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD  142 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence            57999999999999976 5788999998643     2355677776 44579999999999875    567899999999


Q ss_pred             CCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC---CCcccccceecccccc
Q 048219          108 NGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE---NRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~---~~~~~i~dfg~a~~~~  179 (183)
                      +++|.+++.... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.   ++.+||+|||+|+...
T Consensus       143 gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~  215 (400)
T 1nxk_A          143 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT  215 (400)
T ss_dssp             SEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             CCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence            999999997643 3578888899999999999999998   9999999999999997   6889999999998643

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.94  E-value=8.1e-26  Score=171.21  Aligned_cols=147  Identities=21%  Similarity=0.268  Sum_probs=122.0

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--------HHHHHHHHHHHHHhhcCCCceeeeeceEEeCC
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--------EREREFQTEIKVIGRTHHRNLVRLLGYSLEVS   97 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   97 (183)
                      ...|.+.+.||+|+||.||+|... ++..+++|.+.....        .....+.+|+.+++.++||||+++++++....
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            346788899999999999999976 478899999864321        11234778999999999999999999886554


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc---ccccceec
Q 048219           98 KKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC---AKNFRLWI  174 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~---~~i~dfg~  174 (183)
                       .+++||++++++|.+.+... ..+++.....++.|++.||.|||++   +++|+||||+||+++.++.   +||+|||+
T Consensus        89 -~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~  163 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH  163 (322)
T ss_dssp             -EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred             -eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence             89999999999999988543 4577888888999999999999998   9999999999999987654   99999999


Q ss_pred             cccc
Q 048219          175 GKVD  178 (183)
Q Consensus       175 a~~~  178 (183)
                      |+..
T Consensus       164 ~~~~  167 (322)
T 2ycf_A          164 SKIL  167 (322)
T ss_dssp             CEEC
T ss_pred             ceec
Confidence            9864

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.94  E-value=8.4e-26  Score=173.94  Aligned_cols=145  Identities=21%  Similarity=0.278  Sum_probs=124.8

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC-----CeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV-----SKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l  101 (183)
                      +|.+.+.||+|+||.||+|... ++..+++|.+.... ......+.+|+.++..++||||+++++++...     ...++
T Consensus        28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i  107 (364)
T 3qyz_A           28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI  107 (364)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence            4677789999999999999976 57789999986533 33346788999999999999999999998754     36899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +||++. ++|.+++..  ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+...
T Consensus       108 v~e~~~-~~L~~~l~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  179 (364)
T 3qyz_A          108 VQDLME-TDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD  179 (364)
T ss_dssp             EEECCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEcccC-cCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence            999997 589988865  3477888888999999999999998   99999999999999999999999999998654

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.94  E-value=9.1e-26  Score=168.63  Aligned_cols=145  Identities=23%  Similarity=0.329  Sum_probs=123.2

Q ss_pred             Hhchhc-ccCcCcCceEEEEEEc---CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           29 TDGFKE-KVGRGSSGTVYKGAMI---NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        29 ~~~~~~-~lg~g~~g~v~~~~~~---~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      .+.+.+ .||+|+||.||+|.+.   .+..+++|.+....  ......+.+|+.+++.++||||+++++++ ..+..+++
T Consensus        17 ~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv   95 (291)
T 1xbb_A           17 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLV   95 (291)
T ss_dssp             GEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             hhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEE
Confidence            455556 8999999999999643   35789999986542  22346788999999999999999999998 66778999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||++++++|.+++... ..+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+|+..
T Consensus        96 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  167 (291)
T 1xbb_A           96 MEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL  167 (291)
T ss_dssp             EECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence            9999999999999764 3477888888999999999999998   9999999999999999999999999999855

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.93  E-value=6.9e-26  Score=170.70  Aligned_cols=145  Identities=29%  Similarity=0.401  Sum_probs=118.3

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      .+.+.+.||+|+||.||++... ++.+++|.+...  .....+.+|+.+++.++||||+++++++.  +..+++|||+++
T Consensus         9 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~   83 (307)
T 2eva_A            9 EIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEG   83 (307)
T ss_dssp             GEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTT
T ss_pred             HeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCC
Confidence            3556788999999999999875 567999998653  23456889999999999999999998876  457899999999


Q ss_pred             CCHHHHHhcCCC--CCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc-ccccceeccccc
Q 048219          109 GSLADILFNAEK--QPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC-AKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~-~~i~dfg~a~~~  178 (183)
                      ++|.+++.....  ......+..++.|++.||.|||+....+++|+||||+||+++.++. +||+|||+|+..
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~  156 (307)
T 2eva_A           84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI  156 (307)
T ss_dssp             CBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----
T ss_pred             CCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccc
Confidence            999999976432  3567777888999999999999932238999999999999998876 799999999754

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.93  E-value=8.7e-26  Score=169.09  Aligned_cols=145  Identities=22%  Similarity=0.333  Sum_probs=123.0

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH--HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+.+.||+|+||.||+|... +++.+++|.+......  ....+.+|+.+++.++||||+++++++...+..+++||++
T Consensus         5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (299)
T 2r3i_A            5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL   84 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEcc
Confidence            456678999999999999976 5788999988643221  2256788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      . +++.+++.... ..+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+|+..
T Consensus        85 ~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  153 (299)
T 2r3i_A           85 H-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF  153 (299)
T ss_dssp             S-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHH
T ss_pred             c-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhc
Confidence            7 59998886543 4567778888999999999999998   9999999999999999999999999998754

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.93  E-value=9.9e-26  Score=174.04  Aligned_cols=144  Identities=20%  Similarity=0.287  Sum_probs=119.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC------eE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS------KK   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~   99 (183)
                      .|.+.+.||+|+||.||+|... .+..+++|.+...  .......+.+|+.+++.++||||+++++++....      ..
T Consensus        26 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~  105 (371)
T 2xrw_A           26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV  105 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEE
T ss_pred             heeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccce
Confidence            4667788999999999999876 5788999998653  2334466889999999999999999999987654      68


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++||++++ ++.+.+..   .+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+...
T Consensus       106 ~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  178 (371)
T 2xrw_A          106 YIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  178 (371)
T ss_dssp             EEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred             EEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence            999999975 78777743   467778888999999999999998   99999999999999999999999999998653

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.93  E-value=3.9e-26  Score=176.18  Aligned_cols=144  Identities=23%  Similarity=0.300  Sum_probs=110.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC------CeE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV------SKK   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~   99 (183)
                      +|.+.+.||+|+||.||+|... ++..+++|.+....  ......+.+|+.+++.++|+||+++++++...      ...
T Consensus        30 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  109 (367)
T 2fst_X           30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV  109 (367)
T ss_dssp             TEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred             ceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeE
Confidence            4667789999999999999865 57889999986532  33456788999999999999999999998654      557


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|++ +++|.+++..  ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||+|+..
T Consensus       110 ~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~  182 (367)
T 2fst_X          110 YLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT  182 (367)
T ss_dssp             EEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred             EEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence            9999998 6788887754  4577888888999999999999998   9999999999999999999999999999864

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.93  E-value=2.4e-26  Score=170.63  Aligned_cols=146  Identities=27%  Similarity=0.354  Sum_probs=120.0

Q ss_pred             HHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC-CeEEEEEecc
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV-SKKILVYEYM  106 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e~~  106 (183)
                      ..+.+.+.||+|+||.||++... +..+++|.+....  ....+.+|+.++..++|||++++++++... +..+++||++
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~   97 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   97 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence            34667789999999999999764 6789999987542  345688899999999999999999987654 5789999999


Q ss_pred             CCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++|.+++.... ..+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+++...
T Consensus        98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  168 (278)
T 1byg_A           98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  168 (278)
T ss_dssp             TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred             CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence            9999999886532 2256777888999999999999998   99999999999999999999999999997543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.93  E-value=3.3e-26  Score=176.61  Aligned_cols=146  Identities=10%  Similarity=-0.015  Sum_probs=106.2

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhc--CCCceeeee-------ceEEeC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRT--HHRNLVRLL-------GYSLEV   96 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l--~h~~i~~~~-------~~~~~~   96 (183)
                      +.+.+.||+|+||.||+|.+. ++..+|+|.+....   ......+.+|+.++..+  +|||+++++       +++...
T Consensus        64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~  143 (371)
T 3q60_A           64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ  143 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred             eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence            456678999999999999976 67889999987632   23345567775444433  699988754       344332


Q ss_pred             -----------------CeEEEEEeccCCCCHHHHHhcCCCCCChHHH------HHHHHHHHHHHHHhhhCCCCCceecC
Q 048219           97 -----------------SKKILVYEYMSNGSLADILFNAEKQPNWIER------TGIARDIARGILYLHDECETQIIHCD  153 (183)
Q Consensus        97 -----------------~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~------~~i~~~i~~~l~~lh~~~~~~i~H~d  153 (183)
                                       ...++||||++ ++|.+++......+.+..+      ..++.|++.||.|||++   +|+|||
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrD  219 (371)
T 3q60_A          144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGH  219 (371)
T ss_dssp             TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred             CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCc
Confidence                             34799999998 7999999764333344444      56779999999999998   999999


Q ss_pred             CCCCCEEecCCCcccccceecccccc
Q 048219          154 IKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       154 l~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |||+||+++.++.+||+|||+|+...
T Consensus       220 ikp~NIll~~~~~~kL~DFG~a~~~~  245 (371)
T 3q60_A          220 FTPDNLFIMPDGRLMLGDVSALWKVG  245 (371)
T ss_dssp             CSGGGEEECTTSCEEECCGGGEEETT
T ss_pred             CCHHHEEECCCCCEEEEecceeeecC
Confidence            99999999999999999999998654

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.93  E-value=2.1e-25  Score=166.19  Aligned_cols=147  Identities=22%  Similarity=0.213  Sum_probs=115.9

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .+.+.+.||+|+||.||+|... +++.+++|.+....  ......+.++...++.+.|||++++++++...+..+++||+
T Consensus         8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~   87 (290)
T 3fme_A            8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL   87 (290)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEEC
T ss_pred             hhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEeh
Confidence            4667789999999999999975 57889999986532  12223344555567888999999999999999999999999


Q ss_pred             cCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++ ++.+++..   ....+++..+..++.|++.||.|||++  .+++|+||||+||+++.++.++|+|||+|+..
T Consensus        88 ~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           88 MDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             CSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             hcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            974 88776643   345678888889999999999999984  28999999999999999999999999999754

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.93  E-value=1.3e-25  Score=168.58  Aligned_cols=146  Identities=27%  Similarity=0.343  Sum_probs=122.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh----HHHHHHHHHHHHHhhcCCCceeeeeceEE--eCCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD----EREREFQTEIKVIGRTHHRNLVRLLGYSL--EVSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~l  101 (183)
                      .|.+.+.||+|+||.||++... ++..+++|.+.....    .....+.+|+.+++.++|+||+++++++.  .....++
T Consensus         6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (305)
T 2wtk_C            6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM   85 (305)
T ss_dssp             CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred             ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence            3667789999999999999975 578899999875421    23467889999999999999999999985  4557899


Q ss_pred             EEeccCCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +||+++++ +.+.+... ...+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+++..
T Consensus        86 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~  159 (305)
T 2wtk_C           86 VMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL  159 (305)
T ss_dssp             EEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence            99999865 66666543 34577888888999999999999998   9999999999999999999999999999754

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=2.2e-25  Score=169.43  Aligned_cols=148  Identities=23%  Similarity=0.284  Sum_probs=121.7

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhh--cCCCceeeeeceEEeC----Ce
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR--THHRNLVRLLGYSLEV----SK   98 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~----~~   98 (183)
                      .....+.+.+.||+|+||.||+|... +..+++|.+....   ......|.+++..  ++|+||+++++++...    ..
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  109 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ  109 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred             ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence            34456788899999999999999875 7789999986432   2233445555544  4899999999999876    68


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCC-----CCCceecCCCCCCEEecCCCccccccee
Q 048219           99 KILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC-----ETQIIHCDIKPQNILMDENRCAKNFRLW  173 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-----~~~i~H~dl~~~nil~~~~~~~~i~dfg  173 (183)
                      .+++|||+++++|.+++...  .+++..+..++.|++.||.|||++.     ..+++|+||||+||+++.++.+||+|||
T Consensus       110 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  187 (337)
T 3mdy_A          110 LYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  187 (337)
T ss_dssp             EEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             eEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCC
Confidence            89999999999999999653  4778888889999999999999741     2289999999999999999999999999


Q ss_pred             ccccc
Q 048219          174 IGKVD  178 (183)
Q Consensus       174 ~a~~~  178 (183)
                      +|+..
T Consensus       188 ~a~~~  192 (337)
T 3mdy_A          188 LAVKF  192 (337)
T ss_dssp             TCEEC
T ss_pred             Cceee
Confidence            99654

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.93  E-value=1.1e-25  Score=171.06  Aligned_cols=148  Identities=23%  Similarity=0.286  Sum_probs=125.8

Q ss_pred             HHhchh-cccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEE
Q 048219           28 ITDGFK-EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        28 ~~~~~~-~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv  102 (183)
                      ..+.+. +.||+|+||.||+|... +++.+++|.+.....  .....+.+|+.++..+. ||||+++++++...+..+++
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv  107 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI  107 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence            345554 78999999999999976 578899998865322  22456888999999885 69999999999999999999


Q ss_pred             EeccCCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC---CCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE---NRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~---~~~~~i~dfg~a~~~  178 (183)
                      ||++++++|.+++... ...+++..+..++.|++.||.|||++   +++|+||||+||+++.   .+.++|+|||+|+..
T Consensus       108 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~  184 (327)
T 3lm5_A          108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI  184 (327)
T ss_dssp             EECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC
T ss_pred             EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCcccccc
Confidence            9999999999987543 24577888889999999999999998   9999999999999987   789999999999865

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.93  E-value=1.9e-25  Score=167.55  Aligned_cols=141  Identities=21%  Similarity=0.278  Sum_probs=120.1

Q ss_pred             hchh-cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHH-hhcCCCceeeeeceEEe----CCeEEEE
Q 048219           30 DGFK-EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVI-GRTHHRNLVRLLGYSLE----VSKKILV  102 (183)
Q Consensus        30 ~~~~-~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~----~~~~~lv  102 (183)
                      +.+. +.||+|+||.||+|... ++..+++|.+...     ....+|+.++ +..+||||+++++++..    ....+++
T Consensus        19 y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv   93 (299)
T 3m2w_A           19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV   93 (299)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             hhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEE
Confidence            3343 67999999999999975 5788999998643     2455677777 55689999999999876    6678999


Q ss_pred             EeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC---CCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE---NRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~---~~~~~i~dfg~a~~~  178 (183)
                      ||++++++|.+++.... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.   ++.++|+|||+|...
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  170 (299)
T 3m2w_A           94 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  170 (299)
T ss_dssp             ECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence            99999999999997643 3578888889999999999999998   9999999999999998   788999999999765

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.93  E-value=8.7e-26  Score=172.71  Aligned_cols=146  Identities=14%  Similarity=0.084  Sum_probs=116.6

Q ss_pred             HHhchhcccCcCcCceEEEEEEc----CCcEEEEEEccchhhHH-----------HHHHHHHHHHHhhcCCCceeeeece
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDER-----------EREFQTEIKVIGRTHHRNLVRLLGY   92 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~~~~-----------~~~~~~e~~~l~~l~h~~i~~~~~~   92 (183)
                      ..|.+.+.||+|+||.||+|...    .+..+++|.........           ...+..|+..+..++|+||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            45677789999999999999976    45678888876432110           1235678888999999999999999


Q ss_pred             EEe----CCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC--c
Q 048219           93 SLE----VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR--C  166 (183)
Q Consensus        93 ~~~----~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~--~  166 (183)
                      +..    ....+++||++ +++|.+++.... .+++..+..++.|++.||.|||++   +++|+||||+||+++.++  .
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~  191 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQ  191 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTS
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCc
Confidence            987    67889999999 899999886543 577888899999999999999998   999999999999999877  9


Q ss_pred             ccccceeccccc
Q 048219          167 AKNFRLWIGKVD  178 (183)
Q Consensus       167 ~~i~dfg~a~~~  178 (183)
                      +||+|||+|+..
T Consensus       192 ~kL~Dfg~a~~~  203 (345)
T 2v62_A          192 VYLADYGLSYRY  203 (345)
T ss_dssp             EEECCCTTCEES
T ss_pred             EEEEeCCCceec
Confidence            999999999754

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.93  E-value=3.4e-25  Score=174.13  Aligned_cols=146  Identities=22%  Similarity=0.289  Sum_probs=123.3

Q ss_pred             HhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhc------CCCceeeeeceEEeCCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRT------HHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~~l  101 (183)
                      +|.+.+.||+|+||.||+|.... +..+|+|.+.... .....+..|+.++..+      .|+|++++++++...+..++
T Consensus        98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  176 (429)
T 3kvw_A           98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM  176 (429)
T ss_dssp             TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred             cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence            46677899999999999998764 7889999986542 2334566777777766      57799999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc--ccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC--AKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~--~~i~dfg~a~~~  178 (183)
                      +||++. +++.+++.... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.  +||+|||+|+..
T Consensus       177 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~  252 (429)
T 3kvw_A          177 TFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE  252 (429)
T ss_dssp             EECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred             EEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence            999996 58998887644 3478888889999999999999998   9999999999999999876  999999999754


Q ss_pred             c
Q 048219          179 E  179 (183)
Q Consensus       179 ~  179 (183)
                      .
T Consensus       253 ~  253 (429)
T 3kvw_A          253 H  253 (429)
T ss_dssp             T
T ss_pred             C
Confidence            3

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.93  E-value=1.2e-25  Score=170.32  Aligned_cols=146  Identities=32%  Similarity=0.449  Sum_probs=124.3

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEe------CCeEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLE------VSKKI  100 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~------~~~~~  100 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+.... .....+..|+.++..+ .||||+++++++..      .+..+
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~  103 (326)
T 2x7f_A           25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW  103 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence            4567789999999999999975 57889999876432 2335678899999998 79999999999976      45789


Q ss_pred             EEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          101 LVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++||++++++|.+++.... ..+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||++...
T Consensus       104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  179 (326)
T 2x7f_A          104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  179 (326)
T ss_dssp             EEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred             EEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence            9999999999999987643 4567778888999999999999998   9999999999999999999999999999864

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.93  E-value=1e-25  Score=174.59  Aligned_cols=142  Identities=20%  Similarity=0.264  Sum_probs=117.4

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC-----------
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV-----------   96 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----------   96 (183)
                      .|.+.+.||+|+||.||+|... ++..+|+|.+.....    ...+|+.+++.++|+||+++++++...           
T Consensus         8 ~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~   83 (383)
T 3eb0_A            8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP   83 (383)
T ss_dssp             TEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred             eEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence            4667789999999999999875 578999998864321    223689999999999999999998543           


Q ss_pred             ---------------------------CeEEEEEeccCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCC
Q 048219           97 ---------------------------SKKILVYEYMSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDECE  146 (183)
Q Consensus        97 ---------------------------~~~~lv~e~~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~  146 (183)
                                                 ...+++|||++ +++.+.+..   ....+++..+..++.|++.||.|||+.  
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--  160 (383)
T 3eb0_A           84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL--  160 (383)
T ss_dssp             --------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             cccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence                                       34789999997 487776653   345677888888999999999999998  


Q ss_pred             CCceecCCCCCCEEec-CCCcccccceeccccc
Q 048219          147 TQIIHCDIKPQNILMD-ENRCAKNFRLWIGKVD  178 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~-~~~~~~i~dfg~a~~~  178 (183)
                       +|+|+||||+||+++ .++.+||+|||+|+..
T Consensus       161 -gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~  192 (383)
T 3eb0_A          161 -GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKL  192 (383)
T ss_dssp             -TEECSCCCGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             -cCccCccCHHHEEEcCCCCcEEEEECCCCccc
Confidence             999999999999998 5789999999999854

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.93  E-value=7.7e-26  Score=176.01  Aligned_cols=142  Identities=22%  Similarity=0.293  Sum_probs=116.2

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCe------EEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSK------KILV  102 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------~~lv  102 (183)
                      .|.+.+.||+|+||.||+|....+..+++|++.....    ...+|+.+++.++|+||+++++++...+.      .+++
T Consensus        41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv  116 (394)
T 4e7w_A           41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV  116 (394)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred             eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence            4677789999999999999988777788888754321    12358999999999999999999865433      7899


Q ss_pred             EeccCCCCHHHHHh---cCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec-CCCcccccceeccccc
Q 048219          103 YEYMSNGSLADILF---NAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD-ENRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~-~~~~~~i~dfg~a~~~  178 (183)
                      |||+++ ++...+.   .....+++..+..++.|++.||.|||++   +|+||||||+||+++ .++.+||+|||+|+..
T Consensus       117 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~  192 (394)
T 4e7w_A          117 LEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL  192 (394)
T ss_dssp             EECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             eeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence            999976 4443332   2245677888888999999999999998   999999999999999 7899999999999864

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.93  E-value=5.1e-26  Score=174.40  Aligned_cols=141  Identities=16%  Similarity=0.175  Sum_probs=120.1

Q ss_pred             HhchhcccCcCcCceEEEEEEcC---------CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceee-----------
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN---------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR-----------   88 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~---------~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-----------   88 (183)
                      .|.+.+.||+|+||.||+|....         +..+++|.+...     ..+.+|+.+++.++|+|+++           
T Consensus        43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  117 (352)
T 2jii_A           43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL  117 (352)
T ss_dssp             EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred             eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence            56677899999999999998764         678999998653     35678999999999998887           


Q ss_pred             ----eeceEEe-CCeEEEEEeccCCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec
Q 048219           89 ----LLGYSLE-VSKKILVYEYMSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD  162 (183)
Q Consensus        89 ----~~~~~~~-~~~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~  162 (183)
                          +++++.. ....+++||++ +++|.+++... ...+++..+..++.|++.||.|||++   +++|+||||+||+++
T Consensus       118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~  193 (352)
T 2jii_A          118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVD  193 (352)
T ss_dssp             SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEE
T ss_pred             CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEc
Confidence                5666655 67889999999 99999999764 24678888999999999999999998   999999999999999


Q ss_pred             CCC--cccccceeccccc
Q 048219          163 ENR--CAKNFRLWIGKVD  178 (183)
Q Consensus       163 ~~~--~~~i~dfg~a~~~  178 (183)
                      .++  .++|+|||+|+..
T Consensus       194 ~~~~~~~kl~Dfg~a~~~  211 (352)
T 2jii_A          194 PEDQSQVTLAGYGFAFRY  211 (352)
T ss_dssp             TTEEEEEEECCGGGCBCS
T ss_pred             CCCCceEEEecCcceeec
Confidence            988  8999999999764

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.93  E-value=5.4e-25  Score=164.10  Aligned_cols=151  Identities=23%  Similarity=0.320  Sum_probs=129.0

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      ....+|.+.+.||+|+||.||+|... +++.+++|.+....  ......+.+|+.+++.++||||+++++++...+..++
T Consensus        19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            33456788899999999999999976 57889999986532  2234578899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC---Ccccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN---RCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~---~~~~i~dfg~a~~~  178 (183)
                      +||+++++++.+.+... ..+++..+..++.|++.||.|||++   +++|+||+|+||+++..   +.++|+|||+++..
T Consensus        99 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~  174 (287)
T 2wei_A           99 VGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF  174 (287)
T ss_dssp             EECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred             EEEccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence            99999999998887653 3467888888999999999999998   99999999999999764   46999999999865


Q ss_pred             c
Q 048219          179 E  179 (183)
Q Consensus       179 ~  179 (183)
                      .
T Consensus       175 ~  175 (287)
T 2wei_A          175 Q  175 (287)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.93  E-value=9.3e-26  Score=186.37  Aligned_cols=145  Identities=20%  Similarity=0.220  Sum_probs=122.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEc--CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCe-----E
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI--NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSK-----K   99 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-----~   99 (183)
                      ..|.+.+.||+|+||.||++.+.  ++..|++|.+.... ......+..|+.++..++||||+++++++...+.     .
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            45777789999999999999976  57889999886432 3344568899999999999999999999987655     7


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++||||+++++|.+.+..   .+++..+..++.|++.||.|+|++   +|+|+||||+||+++.+ .+||+|||+|+...
T Consensus       160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~  232 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN  232 (681)
T ss_dssp             EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred             EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence            999999999999887643   577888889999999999999998   99999999999999875 89999999998653

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.93  E-value=1.8e-25  Score=174.41  Aligned_cols=140  Identities=27%  Similarity=0.319  Sum_probs=110.2

Q ss_pred             cccCcCcCceEEEEEEc---CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEe--CCeEEEEEeccCC
Q 048219           34 EKVGRGSSGTVYKGAMI---NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE--VSKKILVYEYMSN  108 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~  108 (183)
                      +.||+|+||.||+|...   .+..+++|.+....  ....+.+|+.+++.++||||+++++++..  ....+++|||+. 
T Consensus        27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~-  103 (405)
T 3rgf_A           27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-  103 (405)
T ss_dssp             CCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-
T ss_pred             cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-
Confidence            47999999999999865   46789999987532  12357789999999999999999999965  668999999996 


Q ss_pred             CCHHHHHhcC--------CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe----cCCCcccccceeccc
Q 048219          109 GSLADILFNA--------EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM----DENRCAKNFRLWIGK  176 (183)
Q Consensus       109 ~~l~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~----~~~~~~~i~dfg~a~  176 (183)
                      +++.+.+...        ...+++..+..++.|++.||.|||++   +|+|+||||+||++    +..+.+||+|||+|+
T Consensus       104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~  180 (405)
T 3rgf_A          104 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR  180 (405)
T ss_dssp             EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC
T ss_pred             CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCce
Confidence            4887777421        12377788888999999999999998   99999999999999    677899999999998


Q ss_pred             ccc
Q 048219          177 VDE  179 (183)
Q Consensus       177 ~~~  179 (183)
                      ...
T Consensus       181 ~~~  183 (405)
T 3rgf_A          181 LFN  183 (405)
T ss_dssp             ---
T ss_pred             ecC
Confidence            654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.93  E-value=3.2e-25  Score=169.63  Aligned_cols=144  Identities=19%  Similarity=0.270  Sum_probs=123.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC-----CeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV-----SKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l  101 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+.... ......+.+|+.+++.++|+||+++++++...     ...++
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l   91 (353)
T 2b9h_A           12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI   91 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred             ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence            3566788999999999999976 57889999986432 33445678999999999999999999887653     67899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +||++. ++|.+.+..  ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+..
T Consensus        92 v~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (353)
T 2b9h_A           92 IQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII  162 (353)
T ss_dssp             EECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence            999997 589888865  3577888888999999999999998   9999999999999999999999999999864

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.93  E-value=2.1e-25  Score=172.21  Aligned_cols=144  Identities=21%  Similarity=0.310  Sum_probs=120.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeE------
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK------   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~------   99 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+....  ......+.+|+.+++.++||||+++++++...+..      
T Consensus        43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  122 (371)
T 4exu_A           43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF  122 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred             cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence            3556678999999999999976 57889999987532  23346788999999999999999999999876654      


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++||++. +++.+.+.   ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+...
T Consensus       123 ~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  195 (371)
T 4exu_A          123 YLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD  195 (371)
T ss_dssp             EEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred             EEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence            99999997 58877663   3477888889999999999999998   99999999999999999999999999998543

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.93  E-value=3.4e-25  Score=165.46  Aligned_cols=146  Identities=21%  Similarity=0.275  Sum_probs=121.0

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceE-EeCCeEEEEEec
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS-LEVSKKILVYEY  105 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~  105 (183)
                      ..|.+.+.||+|+||.||+|... .+..+++|.+....  ....+..|+.++..++|++++..+..+ ...+..+++||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~   86 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   86 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence            35677889999999999999974 57889999764321  223467899999999988766665555 567788999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe---cCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM---DENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~---~~~~~~~i~dfg~a~~~~  179 (183)
                      + +++|.+++......+++..+..++.|++.||.|||++   +++|+||||+||++   +.++.+||+|||+|+...
T Consensus        87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~  159 (296)
T 4hgt_A           87 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             C-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence            9 8999999976566788889999999999999999998   99999999999999   788999999999998653

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.92  E-value=3.3e-25  Score=168.52  Aligned_cols=144  Identities=27%  Similarity=0.426  Sum_probs=114.7

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHH--HHhhcCCCceeeeeceEEe-----CCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIK--VIGRTHHRNLVRLLGYSLE-----VSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~--~l~~l~h~~i~~~~~~~~~-----~~~~~l  101 (183)
                      .+.+.+.||+|+||.||+|.. ++..+++|.+.....   ..+..|.+  .+..++|+||+++++.+..     ....++
T Consensus        14 ~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l   89 (336)
T 3g2f_A           14 NLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL   89 (336)
T ss_dssp             SEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred             HhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence            456778999999999999965 577899999865432   22333444  4456899999999876542     235689


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCC------CCCceecCCCCCCEEecCCCcccccceecc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC------ETQIIHCDIKPQNILMDENRCAKNFRLWIG  175 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~------~~~i~H~dl~~~nil~~~~~~~~i~dfg~a  175 (183)
                      +|||+++++|.+++...  ..++.....++.|++.||.|||+..      ..+++|+||||+||+++.++.+||+|||+|
T Consensus        90 v~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a  167 (336)
T 3g2f_A           90 VMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS  167 (336)
T ss_dssp             EECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEecCCCCcHHHHHhhc--ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccce
Confidence            99999999999999654  3467778889999999999999741      128999999999999999999999999999


Q ss_pred             ccc
Q 048219          176 KVD  178 (183)
Q Consensus       176 ~~~  178 (183)
                      +..
T Consensus       168 ~~~  170 (336)
T 3g2f_A          168 MRL  170 (336)
T ss_dssp             EEC
T ss_pred             eec
Confidence            754

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.92  E-value=3.1e-26  Score=172.98  Aligned_cols=146  Identities=22%  Similarity=0.344  Sum_probs=121.7

Q ss_pred             HHHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      ...+.+.+.||+|+||.||+|....  .+++|.+....  ......+.+|+.+++.++|+||+++++++...+..+++||
T Consensus        32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e  109 (319)
T 2y4i_B           32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS  109 (319)
T ss_dssp             CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred             HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence            3446677899999999999998765  47888875421  1122346678999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++|.+++......+++..+..++.|++.||.|||++   +++|+||+|+||+++ ++.++|+|||+|+..
T Consensus       110 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~  179 (319)
T 2y4i_B          110 LCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSIS  179 (319)
T ss_dssp             CCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred             cccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence            9999999999976655678888889999999999999998   999999999999998 679999999998754

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.92  E-value=4e-25  Score=169.40  Aligned_cols=144  Identities=21%  Similarity=0.305  Sum_probs=121.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCe------E
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSK------K   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------~   99 (183)
                      .|.+.+.||+|+||.||+|... ++..+++|.+....  ......+.+|+.+++.++||||+++++++.....      .
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~  104 (353)
T 3coi_A           25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF  104 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred             eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence            3556678999999999999976 57889999986532  2334678899999999999999999999876554      4


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++||++. +++.+.+.   ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.++|+|||+|+...
T Consensus       105 ~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A          105 YLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD  177 (353)
T ss_dssp             EEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred             EEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence            99999997 57777663   2477888888999999999999998   99999999999999999999999999998643

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.92  E-value=1e-24  Score=165.53  Aligned_cols=146  Identities=21%  Similarity=0.266  Sum_probs=123.3

Q ss_pred             HhchhcccCcCcCceEEEEEE-c-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCC------ceeeeeceEEeCCeEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAM-I-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHR------NLVRLLGYSLEVSKKI  100 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~-~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~~~~~~  100 (183)
                      .|.+.+.||+|+||.||+|.. . ++..+++|.+.... .....+.+|+.++..++|+      +++++++++...+..+
T Consensus        15 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~   93 (339)
T 1z57_A           15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC   93 (339)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred             ceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence            567788999999999999987 3 57889999986542 3345677888888887655      4899999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC----------------
Q 048219          101 LVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE----------------  163 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~----------------  163 (183)
                      ++||++ ++++.+++.... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.                
T Consensus        94 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~  169 (339)
T 1z57_A           94 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDER  169 (339)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred             EEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccccc
Confidence            999999 789999887644 3467788888999999999999998   9999999999999987                


Q ss_pred             ---CCcccccceecccccc
Q 048219          164 ---NRCAKNFRLWIGKVDE  179 (183)
Q Consensus       164 ---~~~~~i~dfg~a~~~~  179 (183)
                         ++.++|+|||+|+...
T Consensus       170 ~~~~~~~kl~Dfg~~~~~~  188 (339)
T 1z57_A          170 TLINPDIKVVDFGSATYDD  188 (339)
T ss_dssp             EESCCCEEECCCSSCEETT
T ss_pred             cccCCCceEeeCcccccCc
Confidence               5679999999998643

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.92  E-value=5.5e-25  Score=170.53  Aligned_cols=134  Identities=24%  Similarity=0.334  Sum_probs=109.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcC--------CCceeeeeceEE----
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTH--------HRNLVRLLGYSL----   94 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~--------h~~i~~~~~~~~----   94 (183)
                      ..|.+.+.||+|+||.||+|... ++..+++|.+... ......+.+|+.+++.++        |+|++++++++.    
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            45777789999999999999875 5788999998754 234456788999998885        788999999987    


Q ss_pred             eCCeEEEEEeccCCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC
Q 048219           95 EVSKKILVYEYMSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR  165 (183)
Q Consensus        95 ~~~~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~  165 (183)
                      .....+++||++ ++++.+.+... ...+++..+..++.|++.||.|||++  .+|+||||||+||+++.++
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~--~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTK--CRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECCCCSGGGEEECCCH
T ss_pred             CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHeeEeccc
Confidence            455789999999 55666666543 35578888889999999999999985  2899999999999999775

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.92  E-value=6.5e-25  Score=174.68  Aligned_cols=145  Identities=20%  Similarity=0.278  Sum_probs=121.8

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCC-ceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHR-NLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .|.+.+.||+|+||.||+|... .+..|++|.+.....  ...+..|+.++..+.|. ++..+..++......+++||++
T Consensus         8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~   85 (483)
T 3sv0_A            8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL   85 (483)
T ss_dssp             TEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             cEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence            4567789999999999999975 578899998654321  23467899999999874 5555666666788899999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe---cCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM---DENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~---~~~~~~~i~dfg~a~~~~  179 (183)
                       +++|.+++......+++..+..++.|++.||.|||++   +|+|+||||+||++   +..+.+||+|||+|+...
T Consensus        86 -g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             -CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence             8999999986666788999999999999999999998   99999999999999   578899999999998653

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.92  E-value=4.5e-25  Score=167.07  Aligned_cols=147  Identities=24%  Similarity=0.344  Sum_probs=120.0

Q ss_pred             HhchhcccCcCcCceEEEEEEc--CCcEEEEEEccchhhH--HHHHHHHHHHHHhhc---CCCceeeeeceEE-----eC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI--NRQLVAVNRLEKVLDE--REREFQTEIKVIGRT---HHRNLVRLLGYSL-----EV   96 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~l---~h~~i~~~~~~~~-----~~   96 (183)
                      .|.+.+.||+|+||.||+|...  ++..+++|.+......  ....+.+|+.+++.+   .||||+++++++.     ..
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~   91 (326)
T 1blx_A           12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   91 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred             ceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence            4667789999999999999974  5778999987643211  112345666666655   8999999999987     45


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecc
Q 048219           97 SKKILVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIG  175 (183)
Q Consensus        97 ~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a  175 (183)
                      ...+++||+++ ++|.+++.... ..+++..+..++.|++.||.|||++   +++|+||+|+||+++.++.++|+|||+|
T Consensus        92 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~  167 (326)
T 1blx_A           92 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA  167 (326)
T ss_dssp             EEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred             ceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCccc
Confidence            67899999997 59999887643 3477888888999999999999998   9999999999999999999999999999


Q ss_pred             cccc
Q 048219          176 KVDE  179 (183)
Q Consensus       176 ~~~~  179 (183)
                      +...
T Consensus       168 ~~~~  171 (326)
T 1blx_A          168 RIYS  171 (326)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8653

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.92  E-value=4e-25  Score=173.32  Aligned_cols=142  Identities=25%  Similarity=0.327  Sum_probs=115.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC------CeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV------SKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~l  101 (183)
                      .|.+.+.||+|+||.||+|... ++..|++|.+....    ....+|+.+++.++|+||+++++++...      ...++
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence            3566678999999999999986 58899999886432    1234689999999999999999988542      23678


Q ss_pred             EEeccCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC-Ccccccceecccc
Q 048219          102 VYEYMSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN-RCAKNFRLWIGKV  177 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~-~~~~i~dfg~a~~  177 (183)
                      +|||+++ ++.+.+..   ....+++..+..++.|++.||.|||++   +|+||||||+||+++.+ +.+||+|||+|+.
T Consensus       131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~  206 (420)
T 1j1b_A          131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ  206 (420)
T ss_dssp             EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence            9999975 66655532   345677888888999999999999998   99999999999999965 6789999999985


Q ss_pred             c
Q 048219          178 D  178 (183)
Q Consensus       178 ~  178 (183)
                      .
T Consensus       207 ~  207 (420)
T 1j1b_A          207 L  207 (420)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.92  E-value=1.1e-25  Score=169.67  Aligned_cols=150  Identities=22%  Similarity=0.285  Sum_probs=119.1

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh------HHHHHHHHHHHHHhhc----CCCceeeeeceE
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD------EREREFQTEIKVIGRT----HHRNLVRLLGYS   93 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~------~~~~~~~~e~~~l~~l----~h~~i~~~~~~~   93 (183)
                      .-...|.+.+.||+|+||.||+|... ++..+++|.+.....      .....+..|+.++..+    +|+||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            33456788889999999999999865 578899999865321      1122355688888888    899999999999


Q ss_pred             EeCCeEEEEEec-cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec-CCCcccccc
Q 048219           94 LEVSKKILVYEY-MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD-ENRCAKNFR  171 (183)
Q Consensus        94 ~~~~~~~lv~e~-~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~-~~~~~~i~d  171 (183)
                      ...+..++++|+ +.+++|.+++... ..+++..+..++.|++.||.|||++   +++|+||+|+||+++ .++.++|+|
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~d  183 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLID  183 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEE
Confidence            988899999999 7889999998653 3477888888999999999999998   999999999999999 789999999


Q ss_pred             eeccccc
Q 048219          172 LWIGKVD  178 (183)
Q Consensus       172 fg~a~~~  178 (183)
                      ||+|+..
T Consensus       184 fg~~~~~  190 (312)
T 2iwi_A          184 FGSGALL  190 (312)
T ss_dssp             CSSCEEC
T ss_pred             cchhhhc
Confidence            9999864

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.92  E-value=8.8e-25  Score=163.31  Aligned_cols=145  Identities=21%  Similarity=0.272  Sum_probs=121.3

Q ss_pred             HhchhcccCcCcCceEEEEEE-cCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceE-EeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS-LEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~  106 (183)
                      .+.+.+.||+|+||.||+|.. .+++.+++|.+....  ....+.+|+.++..++|++++..+..+ ......+++||++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 3uzp_A           10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence            356678999999999999997 468889999875432  123577899999999988766655554 5677889999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe---cCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM---DENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~---~~~~~~~i~dfg~a~~~~  179 (183)
                       +++|.+++......+++..+..++.|++.||.|||++   +++|+||||+||++   +.++.+||+|||+|+...
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             -CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence             8899999976566788888999999999999999998   99999999999999   478899999999998643

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.92  E-value=1.2e-24  Score=164.16  Aligned_cols=145  Identities=20%  Similarity=0.297  Sum_probs=124.3

Q ss_pred             HHhchhcccCcCcCceEEEEEEcCCcEEEEEEccch--hhHHHHHHHHHHHHHhhcC--CCceeeeeceEEeCCeEEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKV--LDEREREFQTEIKVIGRTH--HRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      ..|.+.+.||+|+||.||++...++..+++|.+...  .......+.+|+.++..++  |+|++++++++...+..+++|
T Consensus        28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  107 (313)
T 3cek_A           28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  107 (313)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence            346677899999999999999888889999988542  2334567889999999997  599999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      | +.+++|.+++... ..+++..+..++.|++.||.|||++   +++|+||||+||+++. +.+||+|||+|+..
T Consensus       108 e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~  176 (313)
T 3cek_A          108 E-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQM  176 (313)
T ss_dssp             C-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred             e-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccc
Confidence            9 5578999998764 3567778888999999999999998   9999999999999965 88999999999864

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.92  E-value=8.4e-25  Score=167.75  Aligned_cols=147  Identities=24%  Similarity=0.250  Sum_probs=108.0

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCe-------E
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSK-------K   99 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~   99 (183)
                      ..+.+.+.||+|+||.||+|... ++..+++|.+.... ........++..+..++||||+++++++...+.       .
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~  101 (360)
T 3e3p_A           23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYL  101 (360)
T ss_dssp             TTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeE
Confidence            35677789999999999999976 57889999875432 122345567777888899999999999876443       7


Q ss_pred             EEEEeccCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhh--hCCCCCceecCCCCCCEEecC-CCccccccee
Q 048219          100 ILVYEYMSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLH--DECETQIIHCDIKPQNILMDE-NRCAKNFRLW  173 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh--~~~~~~i~H~dl~~~nil~~~-~~~~~i~dfg  173 (183)
                      +++|||+++ ++...+..   ....+++..+..++.|++.|+.|+|  +.   +|+|+||||+||+++. ++.+||+|||
T Consensus       102 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg  177 (360)
T 3e3p_A          102 NVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFG  177 (360)
T ss_dssp             EEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred             EEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence            899999976 55444432   3345677788889999999999999  76   9999999999999997 8999999999


Q ss_pred             cccccc
Q 048219          174 IGKVDE  179 (183)
Q Consensus       174 ~a~~~~  179 (183)
                      +|+...
T Consensus       178 ~a~~~~  183 (360)
T 3e3p_A          178 SAKKLS  183 (360)
T ss_dssp             TCBCCC
T ss_pred             CceecC
Confidence            998653

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.92  E-value=2.1e-24  Score=162.73  Aligned_cols=146  Identities=20%  Similarity=0.244  Sum_probs=112.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh-HHH-HHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-ERE-REFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-~~~-~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+..... ... ..+.++..+++.++||||+++++++...+..+++||+
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~  105 (318)
T 2dyl_A           26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL  105 (318)
T ss_dssp             GEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEec
Confidence            4566678999999999999976 578899999865422 222 3344555567888999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhh-CCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD-ECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      + ++.+..+.......+++..+..++.|++.||.|||+ +   +++|+||+|+||+++.++.++|+|||+++..
T Consensus       106 ~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~  175 (318)
T 2dyl_A          106 M-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRL  175 (318)
T ss_dssp             C-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred             c-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence            9 556666554434567788888899999999999998 5   8999999999999999999999999999754

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.92  E-value=8.2e-25  Score=172.08  Aligned_cols=144  Identities=21%  Similarity=0.255  Sum_probs=116.5

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .+.+.+.||+|+||.|+.....++..||+|.+.....   ..+.+|+.+++.+ +||||+++++++.+....+++||++.
T Consensus        25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~  101 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA  101 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence            4556678999999997765566788999999864321   2245689999988 79999999999999999999999996


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC---C--Ccccccceecccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE---N--RCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~---~--~~~~i~dfg~a~~~~  179 (183)
                       ++|.+++........+.....++.|++.||.|||++   +|+||||||+||+++.   +  ..++|+|||+|+...
T Consensus       102 -g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~  174 (432)
T 3p23_A          102 -ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA  174 (432)
T ss_dssp             -EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred             -CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence             599999976554444445567899999999999998   9999999999999953   2  257799999998653

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.92  E-value=1.4e-24  Score=170.93  Aligned_cols=140  Identities=26%  Similarity=0.263  Sum_probs=113.3

Q ss_pred             hhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      ..+.||+|+||.||.+...++..||+|.+....   ...+..|+.++..+ +||||+++++++.+....+++||++. ++
T Consensus        19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gs   94 (434)
T 2rio_A           19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LN   94 (434)
T ss_dssp             EEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EE
T ss_pred             ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CC
Confidence            346799999999987766778999999986532   23467899999876 89999999999999999999999996 59


Q ss_pred             HHHHHhcCCCCC------ChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC-------------Ccccccc
Q 048219          111 LADILFNAEKQP------NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN-------------RCAKNFR  171 (183)
Q Consensus       111 l~~~l~~~~~~~------~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~-------------~~~~i~d  171 (183)
                      |.+++.......      .+..+..++.|++.||.|||++   +|+|+||||+||+++..             ..+||+|
T Consensus        95 L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D  171 (434)
T 2rio_A           95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD  171 (434)
T ss_dssp             HHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred             HHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence            999986543211      1122356899999999999998   99999999999999754             4799999


Q ss_pred             eeccccc
Q 048219          172 LWIGKVD  178 (183)
Q Consensus       172 fg~a~~~  178 (183)
                      ||+|+..
T Consensus       172 FG~a~~~  178 (434)
T 2rio_A          172 FGLCKKL  178 (434)
T ss_dssp             CTTCEEC
T ss_pred             cccceec
Confidence            9999864

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.91  E-value=3.6e-24  Score=163.59  Aligned_cols=146  Identities=18%  Similarity=0.254  Sum_probs=121.4

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-C-cEEEEEEccchhhHHHHHHHHHHHHHhhcCCCc------eeeeeceEEeCCeE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-R-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN------LVRLLGYSLEVSKK   99 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-~-~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~   99 (183)
                      ..|.+.+.||+|+||.||+|.... + ..+++|.+... ......+..|+.+++.++|++      ++.+.+++...+..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            457778899999999999999753 3 68999998654 233456778899888887655      88889999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe-----------------
Q 048219          100 ILVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM-----------------  161 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~-----------------  161 (183)
                      +++||++ ++++.+.+.... ..+++..+..++.|++.||.|||++   +|+|+||||+||++                 
T Consensus        98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~  173 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEE  173 (355)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred             EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccccc
Confidence            9999999 567776665543 4577888889999999999999998   99999999999999                 


Q ss_pred             --cCCCcccccceeccccc
Q 048219          162 --DENRCAKNFRLWIGKVD  178 (183)
Q Consensus       162 --~~~~~~~i~dfg~a~~~  178 (183)
                        +.++.+||+|||+|+..
T Consensus       174 ~~~~~~~~kl~Dfg~~~~~  192 (355)
T 2eu9_A          174 KSVKNTSIRVADFGSATFD  192 (355)
T ss_dssp             EEESCCCEEECCCTTCEET
T ss_pred             cccCCCcEEEeecCccccc
Confidence              56789999999999864

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.91  E-value=2.5e-24  Score=173.44  Aligned_cols=133  Identities=16%  Similarity=0.264  Sum_probs=103.6

Q ss_pred             hcccCcCcCceEEEEEEcCCcEEEEEEccc-hh-------hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           33 KEKVGRGSSGTVYKGAMINRQLVAVNRLEK-VL-------DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        33 ~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~-~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+.||+|+||.||++. ..+..+++|.... ..       .....++.+|+.+++.++||||+++..++...+..+++||
T Consensus       341 ~~~LG~G~fg~Vy~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE  419 (540)
T 3en9_A          341 EHLIGKGAEADIKRDS-YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS  419 (540)
T ss_dssp             -------CCEEEEEEE-CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred             CCEEeeCCCEEEEEEE-ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence            4579999999999994 3455666665422 11       1123457899999999999999977777777888899999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      |+++++|.+++..         ...++.|++.+|.|||++   +|+||||||+||+++.  .+||+|||+|+....
T Consensus       420 ~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~  481 (540)
T 3en9_A          420 YINGKLAKDVIED---------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL  481 (540)
T ss_dssp             CCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred             CCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence            9999999998854         346889999999999998   9999999999999998  999999999997643

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.91  E-value=4.4e-24  Score=161.90  Aligned_cols=147  Identities=22%  Similarity=0.269  Sum_probs=120.0

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHH-HHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIK-VIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .+.+.+.||+|+||.||+|... ++..+++|.+.... ......+..|+. +++.++||||+++++++...+..+++||+
T Consensus        23 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~  102 (327)
T 3aln_A           23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMEL  102 (327)
T ss_dssp             SEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             HhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEee
Confidence            4556678999999999999976 57889999986532 223344555555 67788999999999999999999999999


Q ss_pred             cCCCCHHHHHhc----CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFN----AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++ ++.+++..    ....+++.....++.|++.||.|||++  .+++|+||||+||+++.++.+||+|||+|+..
T Consensus       103 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          103 MST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             CSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred             cCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence            975 77776642    235577888888999999999999984  28999999999999999999999999999764

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.91  E-value=5.2e-24  Score=164.98  Aligned_cols=148  Identities=24%  Similarity=0.313  Sum_probs=120.8

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CC-----ceeeeeceEEeCCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HR-----NLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~-----~i~~~~~~~~~~~~~~l  101 (183)
                      .|.+.+.||+|+||.||+|... ++..+|+|.+.... .....+..|+.++..+. |+     +++++.+++...+..++
T Consensus        55 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  133 (382)
T 2vx3_A           55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCL  133 (382)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEE
T ss_pred             eEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEE
Confidence            4666789999999999999976 57789999987542 23445667888877764 44     48999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec--CCCcccccceeccccc
Q 048219          102 VYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD--ENRCAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~--~~~~~~i~dfg~a~~~  178 (183)
                      |||+++ ++|.+++.... ..+++..+..++.|++.||.|||++ ..+|+||||||+||+++  .++.+||+|||+|+..
T Consensus       134 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~  211 (382)
T 2vx3_A          134 VFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL  211 (382)
T ss_dssp             EEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred             EEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence            999996 59999887653 4577888888999999999999952 23899999999999995  4678999999999765


Q ss_pred             c
Q 048219          179 E  179 (183)
Q Consensus       179 ~  179 (183)
                      .
T Consensus       212 ~  212 (382)
T 2vx3_A          212 G  212 (382)
T ss_dssp             T
T ss_pred             c
Confidence            3

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.91  E-value=8e-25  Score=178.97  Aligned_cols=149  Identities=24%  Similarity=0.293  Sum_probs=125.0

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccch-hhHHHHHHHHHHHHHhhcCCCceeeeeceEEe------CCeE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV-LDEREREFQTEIKVIGRTHHRNLVRLLGYSLE------VSKK   99 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~   99 (183)
                      ..|.+.+.||+|+||.||+|... ++..+++|.+... .......+.+|+.++..++||||+++++++..      .+..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            45788899999999999999865 5788999988653 33445678899999999999999999888754      5678


Q ss_pred             EEEEeccCCCCHHHHHhcCC--CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc---ccccceec
Q 048219          100 ILVYEYMSNGSLADILFNAE--KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC---AKNFRLWI  174 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~---~~i~dfg~  174 (183)
                      +++|||+++++|.+++....  ..+++..+..++.|++.||.|||+.   +++|+||+|+||+++.++.   ++|+|||+
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG~  170 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGY  170 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccccc
Confidence            99999999999999997643  2466777888999999999999998   9999999999999997764   89999999


Q ss_pred             ccccc
Q 048219          175 GKVDE  179 (183)
Q Consensus       175 a~~~~  179 (183)
                      |+...
T Consensus       171 a~~~~  175 (676)
T 3qa8_A          171 AKELD  175 (676)
T ss_dssp             CCBTT
T ss_pred             ccccc
Confidence            98653

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.91  E-value=4.1e-24  Score=162.96  Aligned_cols=143  Identities=22%  Similarity=0.215  Sum_probs=115.1

Q ss_pred             Hhchh-cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEe----CCeEEEE
Q 048219           29 TDGFK-EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE----VSKKILV  102 (183)
Q Consensus        29 ~~~~~-~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv  102 (183)
                      .|.+. +.||+|+||.||+|... +++.+++|.+..... .   ..+....++.+.|+|++++++++..    ....+++
T Consensus        29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~---~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv  104 (336)
T 3fhr_A           29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-A---RQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII  104 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH-H---HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH-H---HHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence            34553 46999999999999976 578999999865321 1   1122233566789999999999875    4458999


Q ss_pred             EeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC---Ccccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN---RCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~---~~~~i~dfg~a~~~  178 (183)
                      |||+++++|.+++.... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.+   +.++|+|||+|+..
T Consensus       105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~  181 (336)
T 3fhr_A          105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET  181 (336)
T ss_dssp             EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence            99999999999997653 3578888899999999999999998   99999999999999864   45999999999754

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.91  E-value=1.1e-24  Score=165.04  Aligned_cols=147  Identities=20%  Similarity=0.240  Sum_probs=123.9

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH------HHHHHHHHHHHHhhcC--CCceeeeeceEEeCCe
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE------REREFQTEIKVIGRTH--HRNLVRLLGYSLEVSK   98 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~------~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~   98 (183)
                      ..|.+.+.||+|+||.||+|... ++..+++|.+......      ....+..|+.+++.+.  |+|++++++++...+.
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~  122 (320)
T 3a99_A           43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS  122 (320)
T ss_dssp             TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence            34677789999999999999865 5788999998653211      1134567899999886  5999999999999999


Q ss_pred             EEEEEeccCC-CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec-CCCcccccceeccc
Q 048219           99 KILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD-ENRCAKNFRLWIGK  176 (183)
Q Consensus        99 ~~lv~e~~~~-~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~-~~~~~~i~dfg~a~  176 (183)
                      .++++|++.+ ++|.+++... ..+++..+..++.|++.||.|||+.   +++|+||||+||+++ .++.+||+|||+|+
T Consensus       123 ~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~  198 (320)
T 3a99_A          123 FVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGA  198 (320)
T ss_dssp             EEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence            9999999975 8999988653 3567788888999999999999998   999999999999999 67899999999998


Q ss_pred             cc
Q 048219          177 VD  178 (183)
Q Consensus       177 ~~  178 (183)
                      ..
T Consensus       199 ~~  200 (320)
T 3a99_A          199 LL  200 (320)
T ss_dssp             EC
T ss_pred             cc
Confidence            64

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.91  E-value=2.2e-24  Score=160.91  Aligned_cols=132  Identities=11%  Similarity=0.064  Sum_probs=106.3

Q ss_pred             hhcccCcCcCceEEEEEEcCCcEEEEEEccchhh------------------HHHHHHHHHHHHHhhcCCCceeeeeceE
Q 048219           32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLD------------------EREREFQTEIKVIGRTHHRNLVRLLGYS   93 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~------------------~~~~~~~~e~~~l~~l~h~~i~~~~~~~   93 (183)
                      +.+.||+|+||.||+|...++..+++|.+.....                  .....+.+|+.++..++  | +++.+++
T Consensus        94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~  170 (282)
T 1zar_A           94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY  170 (282)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred             ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence            3478999999999999996688999999864321                  13456889999999998  4 6666654


Q ss_pred             EeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCccccccee
Q 048219           94 LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLW  173 (183)
Q Consensus        94 ~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg  173 (183)
                      . .+..+++|||+++++|.+ +..     .  ....++.|++.|+.|+|+.   +++|+||||+||+++ ++.++|+|||
T Consensus       171 ~-~~~~~lvmE~~~g~~L~~-l~~-----~--~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DFG  237 (282)
T 1zar_A          171 A-WEGNAVLMELIDAKELYR-VRV-----E--NPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDFP  237 (282)
T ss_dssp             E-EETTEEEEECCCCEEGGG-CCC-----S--CHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCCT
T ss_pred             e-ccceEEEEEecCCCcHHH-cch-----h--hHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEECC
Confidence            3 356699999999999988 421     1  1235889999999999998   999999999999999 9999999999


Q ss_pred             cccccc
Q 048219          174 IGKVDE  179 (183)
Q Consensus       174 ~a~~~~  179 (183)
                      +|+...
T Consensus       238 ~a~~~~  243 (282)
T 1zar_A          238 QSVEVG  243 (282)
T ss_dssp             TCEETT
T ss_pred             CCeECC
Confidence            998653

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.90  E-value=1.8e-23  Score=160.90  Aligned_cols=148  Identities=24%  Similarity=0.280  Sum_probs=121.7

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-----------CCceeeeeceEEe
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-----------HRNLVRLLGYSLE   95 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~i~~~~~~~~~   95 (183)
                      ..|.+.+.||+|+||.||+|... ++..+++|.+.... .....+.+|+.++..+.           |+||+++++++..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            45778889999999999999975 57889999986532 33456778888888775           7899999999876


Q ss_pred             CC----eEEEEEeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC------C
Q 048219           96 VS----KKILVYEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE------N  164 (183)
Q Consensus        96 ~~----~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~------~  164 (183)
                      .+    ..+++||++ +++|.+++.... ..+++..+..++.|++.||.|||++  .+|+|+||||+||+++.      .
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~--~~ivH~Dikp~NIll~~~~~~~~~  174 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENL  174 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTE
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChHHeEEeccCCCcCc
Confidence            44    688999999 889999887643 4477888888999999999999984  28999999999999953      3


Q ss_pred             Ccccccceecccccc
Q 048219          165 RCAKNFRLWIGKVDE  179 (183)
Q Consensus       165 ~~~~i~dfg~a~~~~  179 (183)
                      +.+||+|||+|+...
T Consensus       175 ~~~kl~Dfg~a~~~~  189 (373)
T 1q8y_A          175 IQIKIADLGNACWYD  189 (373)
T ss_dssp             EEEEECCCTTCEETT
T ss_pred             ceEEEcccccccccC
Confidence            479999999998553

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.87  E-value=2.3e-22  Score=157.36  Aligned_cols=144  Identities=13%  Similarity=0.102  Sum_probs=104.6

Q ss_pred             hhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCC-Cceee---------ee-------
Q 048219           32 FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHH-RNLVR---------LL-------   90 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h-~~i~~---------~~-------   90 (183)
                      ..+.||+|+||.||+|.+. ++..+|+|.+.....   .....+.+|+.+++.+.| .+...         ..       
T Consensus        82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (413)
T 3dzo_A           82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ  161 (413)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred             EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence            4467999999999999965 578999998873221   124567889999988876 21111         01       


Q ss_pred             -----ceEEe-----CCeEEEEEeccCCCCHHHHHhc------CCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCC
Q 048219           91 -----GYSLE-----VSKKILVYEYMSNGSLADILFN------AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI  154 (183)
Q Consensus        91 -----~~~~~-----~~~~~lv~e~~~~~~l~~~l~~------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl  154 (183)
                           .++..     ....+++|+.+ +++|.+++..      ....+++..+..++.|++.||.|||++   +|+||||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi  237 (413)
T 3dzo_A          162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL  237 (413)
T ss_dssp             ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence                 11111     22456777765 6799988842      122344556777889999999999998   9999999


Q ss_pred             CCCCEEecCCCcccccceecccccc
Q 048219          155 KPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       155 ~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ||+||+++.++.+||+|||+|+...
T Consensus       238 Kp~NILl~~~~~~kL~DFG~a~~~~  262 (413)
T 3dzo_A          238 RPVDIVLDQRGGVFLTGFEHLVRDG  262 (413)
T ss_dssp             CGGGEEECTTCCEEECCGGGCEETT
T ss_pred             ccceEEEecCCeEEEEeccceeecC
Confidence            9999999999999999999988543

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.86  E-value=1.3e-22  Score=149.49  Aligned_cols=138  Identities=14%  Similarity=0.193  Sum_probs=101.0

Q ss_pred             chhcccCcCcCceEEEEEE-cCCcE--EEEEEccchhh------------------------HHHHHHHHHHHHHhhcCC
Q 048219           31 GFKEKVGRGSSGTVYKGAM-INRQL--VAVNRLEKVLD------------------------EREREFQTEIKVIGRTHH   83 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~-~~~~~--~~ik~~~~~~~------------------------~~~~~~~~e~~~l~~l~h   83 (183)
                      .+.+.||+|+||.||+|.. .++..  +|+|.+.....                        .....+..|+..+..+.|
T Consensus        50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~  129 (258)
T 1zth_A           50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE  129 (258)
T ss_dssp             EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence            3456899999999999997 67878  99998643211                        112357889999999887


Q ss_pred             CceeeeeceEEeCCeEEEEEeccCC-C----CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhh-hCCCCCceecCCCCC
Q 048219           84 RNLVRLLGYSLEVSKKILVYEYMSN-G----SLADILFNAEKQPNWIERTGIARDIARGILYLH-DECETQIIHCDIKPQ  157 (183)
Q Consensus        84 ~~i~~~~~~~~~~~~~~lv~e~~~~-~----~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh-~~~~~~i~H~dl~~~  157 (183)
                      +++..+..+..  +..++||||+.+ |    ++.+....    .++.....++.|++.++.++| +.   +++|+||||+
T Consensus       130 ~~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlkp~  200 (258)
T 1zth_A          130 AGVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEA---ELVHADLSEY  200 (258)
T ss_dssp             TTCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCSTT
T ss_pred             CCCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHH
Confidence            75432221111  356899999942 2    66665422    112345568899999999999 77   9999999999


Q ss_pred             CEEecCCCcccccceecccccc
Q 048219          158 NILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       158 nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ||+++.  .++|+|||+|....
T Consensus       201 NILl~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          201 NIMYID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             SEEESS--SEEECCCTTCEETT
T ss_pred             HEEEcC--cEEEEECcccccCC
Confidence            999998  89999999998654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.73  E-value=7.3e-18  Score=129.91  Aligned_cols=136  Identities=13%  Similarity=0.058  Sum_probs=95.0

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchh-----------------hHH-----HHHHHHHHHHHhhcCCCcee
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVL-----------------DER-----EREFQTEIKVIGRTHHRNLV   87 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~-----------------~~~-----~~~~~~e~~~l~~l~h~~i~   87 (183)
                      |.+...||+|++|.||+|...++..+|+|.+....                 ...     ......|...|.++.+..+.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            55667899999999999998889999999764210                 000     11123466667666444332


Q ss_pred             eeeceEEeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCc-
Q 048219           88 RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRC-  166 (183)
Q Consensus        88 ~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~-  166 (183)
                      ....+..  ...++||||++|.++..+..     ..  ....+..|++.++.++|..   +++||||||.|||+++++. 
T Consensus       177 vp~p~~~--~~~~LVME~i~G~~L~~l~~-----~~--~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~  244 (397)
T 4gyi_A          177 VPEPIAQ--SRHTIVMSLVDALPMRQVSS-----VP--DPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDA  244 (397)
T ss_dssp             CCCEEEE--ETTEEEEECCSCEEGGGCCC-----CS--CHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECS
T ss_pred             CCeeeec--cCceEEEEecCCccHhhhcc-----cH--HHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCc
Confidence            2211111  23479999999888765431     11  2234678999999999998   9999999999999988763 


Q ss_pred             ---------ccccceecccc
Q 048219          167 ---------AKNFRLWIGKV  177 (183)
Q Consensus       167 ---------~~i~dfg~a~~  177 (183)
                               +.|+||+-|.-
T Consensus       245 ~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          245 EDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             SCTTSEEEEEEECCCTTCEE
T ss_pred             ccccccccceEEEEeCCccc
Confidence                     78999997754

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.50  E-value=6.1e-14  Score=102.95  Aligned_cols=143  Identities=12%  Similarity=0.042  Sum_probs=105.0

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEeccCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      +.+...++.|+.+.||++... +..+++|............+..|+.+++.+. +..++++++++...+..+++||+++|
T Consensus        16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G   94 (263)
T 3tm0_A           16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG   94 (263)
T ss_dssp             SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred             ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence            444556777888889988643 5678888875432122335778899998884 56778888888888899999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCC-------------------------------------------
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC-------------------------------------------  145 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-------------------------------------------  145 (183)
                      .++.+.+..   .   .....++.++..++..||+..                                           
T Consensus        95 ~~l~~~~~~---~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (263)
T 3tm0_A           95 VLCSEEYED---E---QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR  168 (263)
T ss_dssp             EEHHHHCCT---T---TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred             eehhhccCC---c---ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence            988775311   1   112346778888899999710                                           


Q ss_pred             -------------CCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          146 -------------ETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       146 -------------~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                                   ...++|+|+++.||+++..+.+.++||+.|..+.
T Consensus       169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~gd  215 (263)
T 3tm0_A          169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRAD  215 (263)
T ss_dssp             HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEEE
T ss_pred             HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcccCC
Confidence                         1358999999999999876666799999987664

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.30  E-value=3.6e-12  Score=92.99  Aligned_cols=131  Identities=15%  Similarity=0.075  Sum_probs=91.8

Q ss_pred             CcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCc--eeeeeceEEeCCeEEEEEeccCCCCHHHH
Q 048219           37 GRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN--LVRLLGYSLEVSKKILVYEYMSNGSLADI  114 (183)
Q Consensus        37 g~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~  114 (183)
                      +.|..+.||++...++..+++|.....   ....+..|+.+++.+.+.+  +++++.+....+..+++||+++|.++.  
T Consensus        29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--  103 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--  103 (264)
T ss_dssp             CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred             cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence            355668999987666667888886543   1234667888888775433  556777777777889999999998773  


Q ss_pred             HhcCCCCCChHHHHHHHHHHHHHHHHhhhCC-------------------------------------------------
Q 048219          115 LFNAEKQPNWIERTGIARDIARGILYLHDEC-------------------------------------------------  145 (183)
Q Consensus       115 l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-------------------------------------------------  145 (183)
                      . .   ....   ..++.+++..+..+|+..                                                 
T Consensus       104 ~-~---~~~~---~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  176 (264)
T 1nd4_A          104 S-S---HLAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKA  176 (264)
T ss_dssp             T-S---CCCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHH
T ss_pred             c-C---cCCH---hHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHH
Confidence            2 1   1111   135566666777777531                                                 


Q ss_pred             ------CCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          146 ------ETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       146 ------~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                            ...++|+|++|.||+++.++.+.++||+.|..+.
T Consensus       177 ~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g~  216 (264)
T 1nd4_A          177 RMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVAD  216 (264)
T ss_dssp             TCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEEE
T ss_pred             hcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccCC
Confidence                  1128999999999999877667799999988764

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.28  E-value=1.2e-11  Score=94.74  Aligned_cols=143  Identities=17%  Similarity=0.179  Sum_probs=98.2

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEcc--chh-hHHHHHHHHHHHHHhhcCC--CceeeeeceEEeC---CeEEEEEec
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLE--KVL-DEREREFQTEIKVIGRTHH--RNLVRLLGYSLEV---SKKILVYEY  105 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~--~~~-~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~---~~~~lv~e~  105 (183)
                      +.++.|.++.+|+....+ ..+.+|...  ... ......+..|..+++.+..  ..+++++.++.+.   +..+++||+
T Consensus        44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~  122 (359)
T 3dxp_A           44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF  122 (359)
T ss_dssp             EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred             EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence            368889999999876544 456677654  221 1123457789999998864  4567777777655   457899999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCC----------------------------------------
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC----------------------------------------  145 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~----------------------------------------  145 (183)
                      ++|.++.+..   ...++......+..++...|..+|+..                                        
T Consensus       123 v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (359)
T 3dxp_A          123 VSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDS  199 (359)
T ss_dssp             CCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHH
T ss_pred             cCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHH
Confidence            9987664311   122445556667788888888888620                                        


Q ss_pred             ---------------CCCceecCCCCCCEEecCCCc--ccccceeccccccc
Q 048219          146 ---------------ETQIIHCDIKPQNILMDENRC--AKNFRLWIGKVDEA  180 (183)
Q Consensus       146 ---------------~~~i~H~dl~~~nil~~~~~~--~~i~dfg~a~~~~~  180 (183)
                                     ...++|+|+++.||+++.++.  +.++||+.|..+..
T Consensus       200 ~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~p  251 (359)
T 3dxp_A          200 LMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHP  251 (359)
T ss_dssp             HHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEECH
T ss_pred             HHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCCH
Confidence                           246899999999999997653  58999999987654

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.79  E-value=1.8e-08  Score=75.37  Aligned_cols=137  Identities=16%  Similarity=0.203  Sum_probs=86.0

Q ss_pred             ccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCc--eeeeeceEEeCC---eEEEEEeccCC
Q 048219           35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRN--LVRLLGYSLEVS---KKILVYEYMSN  108 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~--i~~~~~~~~~~~---~~~lv~e~~~~  108 (183)
                      .++.|..+.+|...    ..+.+|.....  .....+..|..+++.+. +..  ++++.......+   ..|++|++++|
T Consensus        27 ~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G  100 (304)
T 3sg8_A           27 ISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG  100 (304)
T ss_dssp             EEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred             ecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence            46778888888653    34677765432  33456788999998873 333  333433322222   34789999998


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhC--------------------------------------------
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDE--------------------------------------------  144 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~--------------------------------------------  144 (183)
                      .++......   .++......++.+++..+..+|+.                                            
T Consensus       101 ~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  177 (304)
T 3sg8_A          101 VPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFY  177 (304)
T ss_dssp             EECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHH
T ss_pred             eECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHH
Confidence            777543221   123333444555555555555531                                            


Q ss_pred             -----------CCCCceecCCCCCCEEecC--CCcccccceeccccccc
Q 048219          145 -----------CETQIIHCDIKPQNILMDE--NRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       145 -----------~~~~i~H~dl~~~nil~~~--~~~~~i~dfg~a~~~~~  180 (183)
                                 ....++|+|+++.||+++.  .+.+.++||+.|..++.
T Consensus       178 ~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~  226 (304)
T 3sg8_A          178 RDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP  226 (304)
T ss_dssp             HHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECT
T ss_pred             HHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCCh
Confidence                       1235799999999999998  56678999999987653

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.71  E-value=2.2e-07  Score=69.60  Aligned_cols=138  Identities=12%  Similarity=0.077  Sum_probs=82.8

Q ss_pred             ccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCC---ceeeeeceEE-eCCeEEEEEeccCCCC
Q 048219           35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHR---NLVRLLGYSL-EVSKKILVYEYMSNGS  110 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~-~~~~~~lv~e~~~~~~  110 (183)
                      .++.|....+|..    +..+.+|....  ......+..|..+++.+.+.   .++++..+.. ..+..+++|++++|.+
T Consensus        26 ~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~   99 (306)
T 3tdw_A           26 SLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI   99 (306)
T ss_dssp             EEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred             ecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence            4666777778876    44566776432  23345688899999988642   2455555553 3456789999999877


Q ss_pred             HHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhh-----------------------------------------------
Q 048219          111 LADILFNAEKQPNWIERTGIARDIARGILYLHD-----------------------------------------------  143 (183)
Q Consensus       111 l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~-----------------------------------------------  143 (183)
                      +......   .++......+..++...|..||+                                               
T Consensus       100 l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~  176 (306)
T 3tdw_A          100 LGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRF  176 (306)
T ss_dssp             CHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHH
T ss_pred             Cchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHH
Confidence            7552111   01111111122222222222221                                               


Q ss_pred             ----------CCCCCceecCCCCCCEEecC---CCc-ccccceecccccccc
Q 048219          144 ----------ECETQIIHCDIKPQNILMDE---NRC-AKNFRLWIGKVDEAR  181 (183)
Q Consensus       144 ----------~~~~~i~H~dl~~~nil~~~---~~~-~~i~dfg~a~~~~~~  181 (183)
                                .....++|+|+.+.|++++.   ++. ..++||+.|.+++.-
T Consensus       177 ~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~~  228 (306)
T 3tdw_A          177 QSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPD  228 (306)
T ss_dssp             HHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECGG
T ss_pred             HHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCHH
Confidence                      02336799999999999987   344 479999999877643

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.71  E-value=1.1e-07  Score=69.60  Aligned_cols=137  Identities=13%  Similarity=0.103  Sum_probs=88.7

Q ss_pred             cCcCcCc-eEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEeccCCCCHH
Q 048219           36 VGRGSSG-TVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYMSNGSLA  112 (183)
Q Consensus        36 lg~g~~g-~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~  112 (183)
                      +..|..+ .+|+..... +..+.+|.-..   .....+..|...|+.+. +-.+++++.++.+.+..+++||+++|.++.
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~  108 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF  108 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence            3344444 578765443 45677776433   23445777888888774 334677788888889999999999988776


Q ss_pred             HHHhcCCCCCChHHHHHHHHHHHHHHHHhhhC------------------------------------------------
Q 048219          113 DILFNAEKQPNWIERTGIARDIARGILYLHDE------------------------------------------------  144 (183)
Q Consensus       113 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~------------------------------------------------  144 (183)
                      +......     .....+..++...+.-||..                                                
T Consensus       109 ~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  183 (272)
T 4gkh_A          109 QVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEM  183 (272)
T ss_dssp             HHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHH
T ss_pred             ccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHH
Confidence            6542210     01112333444444444421                                                


Q ss_pred             -------CCCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          145 -------CETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       145 -------~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                             ....++|+|+.+.||+++..+.+-|+||+.|..+..
T Consensus       184 ~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gdp  226 (272)
T 4gkh_A          184 HKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADR  226 (272)
T ss_dssp             HTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEET
T ss_pred             HhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccCCH
Confidence                   012378999999999999877777999999987653

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.37  E-value=2.1e-07  Score=70.98  Aligned_cols=34  Identities=9%  Similarity=0.075  Sum_probs=28.5

Q ss_pred             CCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      ..++|+|+.+.||++++.+.+.++||+.|..+..
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~g~p  255 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPR  255 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCEEECH
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEcccccccCCc
Confidence            4789999999999999655578999999987643

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.18  E-value=1.1e-05  Score=60.71  Aligned_cols=33  Identities=24%  Similarity=0.152  Sum_probs=29.3

Q ss_pred             CCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ..++|+|+.+.|++++.++.+.++||+.|..+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g~  254 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDL  254 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCEECC
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcccCC
Confidence            489999999999999878889999999987654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.17  E-value=6.9e-06  Score=63.50  Aligned_cols=74  Identities=14%  Similarity=0.121  Sum_probs=44.8

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhh---H----HHHHHHHHHHHHhhcCC--C-ceeeeeceEEeCCeEEEE
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---E----REREFQTEIKVIGRTHH--R-NLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~----~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~lv  102 (183)
                      +.+|.|..+.||++... .+..+++|.......   .    ...++..|.++++.+..  + .+++++.  .+....+++
T Consensus        36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~--~d~~~~~lv  113 (397)
T 2olc_A           36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY--SDTEMAVTV  113 (397)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE--EETTTTEEE
T ss_pred             EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEE--EcCCccEEE
Confidence            46899999999998643 456788887542211   0    12345668888876632  2 3344443  245566899


Q ss_pred             EeccCCC
Q 048219          103 YEYMSNG  109 (183)
Q Consensus       103 ~e~~~~~  109 (183)
                      ||++++.
T Consensus       114 mE~l~g~  120 (397)
T 2olc_A          114 MEDLSHL  120 (397)
T ss_dssp             ECCCTTS
T ss_pred             EEeCCCc
Confidence            9999763

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.84  E-value=0.00012  Score=57.06  Aligned_cols=32  Identities=9%  Similarity=0.215  Sum_probs=28.4

Q ss_pred             CCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ..++|+|+++.||+++.++ +.++||+.|..+.
T Consensus       232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~  263 (420)
T 2pyw_A          232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGP  263 (420)
T ss_dssp             CEEECSCCSGGGEEECSSC-EEECCCTTCEEEC
T ss_pred             CeEEecCCCCCcEEEeCCC-CEEEeCcccccCc
Confidence            4899999999999998776 8999999988765

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.78  E-value=0.00037  Score=52.29  Aligned_cols=73  Identities=16%  Similarity=0.138  Sum_probs=52.3

Q ss_pred             ccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcC---CCceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH---HRNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      .++.|....+|+... ++..+.+|.....   ....+..|...|+.+.   ...+++++.+....+..+++||++++.++
T Consensus        43 ~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           43 KLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             EECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             EeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            477788888898764 4556777775432   2345677888887773   24577788777777889999999987653

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.51  E-value=0.00015  Score=53.90  Aligned_cols=32  Identities=19%  Similarity=0.185  Sum_probs=26.8

Q ss_pred             CCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ..++|+|+.+.|++ ..++.+.++||..|..+.
T Consensus       173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g~  204 (301)
T 3dxq_A          173 LAACHCDPLCENFL-DTGERMWIVDWEYSGMND  204 (301)
T ss_dssp             CEEECSCCCGGGEE-ECSSCEEECCCTTCEEEC
T ss_pred             ceeeccCCCcCCEE-ECCCCEEEEecccccCCC
Confidence            35899999999999 556678999999887664

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.51  E-value=0.00061  Score=50.20  Aligned_cols=73  Identities=12%  Similarity=0.220  Sum_probs=47.9

Q ss_pred             cccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCC---ceeeeeceEEeCCeEEEEEeccCCCC
Q 048219           34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHR---NLVRLLGYSLEVSKKILVYEYMSNGS  110 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (183)
                      +.+|.|..+.+|+....+|+.+.+|............+..|...|+.+...   .+++++..  +  ..+++||++++..
T Consensus        21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~l~~~~   96 (288)
T 3f7w_A           21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEWVDERP   96 (288)
T ss_dssp             EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEECCCCCC
T ss_pred             EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEeecccC
Confidence            357889999999999888888999885433222223456788888877432   23333332  2  3468899987643

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.27  E-value=0.00045  Score=51.93  Aligned_cols=34  Identities=18%  Similarity=0.166  Sum_probs=29.0

Q ss_pred             CCceecCCCCCCEEecCC----Ccccccceeccccccc
Q 048219          147 TQIIHCDIKPQNILMDEN----RCAKNFRLWIGKVDEA  180 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~----~~~~i~dfg~a~~~~~  180 (183)
                      ..++|+|+.+.||+++.+    +.+.++||+.|..+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~  220 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR  220 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence            478999999999999874    6789999999987654

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.06  E-value=0.0012  Score=50.85  Aligned_cols=140  Identities=14%  Similarity=0.107  Sum_probs=73.8

Q ss_pred             ccCcCcCceEEEEEEc--------CCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEec
Q 048219           35 KVGRGSSGTVYKGAMI--------NRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~--------~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .+..|....+|++...        ++..+.+++.... ......+.+|..+++.+. +.-.+++++.+.  +  .+++||
T Consensus        57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v~e~  131 (379)
T 3feg_A           57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRLEQY  131 (379)
T ss_dssp             EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEEEC
T ss_pred             EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccEEEE
Confidence            3445666678887653        2356777775321 112334557888887774 222345554442  3  389999


Q ss_pred             cCCCCHH--------------HHHh---cC----CCCCC--hHHHHHHHHHHH-------------------HHHHHh--
Q 048219          106 MSNGSLA--------------DILF---NA----EKQPN--WIERTGIARDIA-------------------RGILYL--  141 (183)
Q Consensus       106 ~~~~~l~--------------~~l~---~~----~~~~~--~~~~~~i~~~i~-------------------~~l~~l--  141 (183)
                      ++|.++.              ..+.   ..    .+...  +..+..+..++.                   ..+.++  
T Consensus       132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~  211 (379)
T 3feg_A          132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK  211 (379)
T ss_dssp             CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred             ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence            9874332              1111   11    11122  122223333221                   112222  


Q ss_pred             --hh-CCCCCceecCCCCCCEEecCC----Ccccccceecccccc
Q 048219          142 --HD-ECETQIIHCDIKPQNILMDEN----RCAKNFRLWIGKVDE  179 (183)
Q Consensus       142 --h~-~~~~~i~H~dl~~~nil~~~~----~~~~i~dfg~a~~~~  179 (183)
                        .. ..+..++|+|+.+.||+++.+    +.+.++||..|..+.
T Consensus       212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~  256 (379)
T 3feg_A          212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNY  256 (379)
T ss_dssp             HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEEE
T ss_pred             HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcCC
Confidence              21 123468999999999999876    688999999887653

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=96.94  E-value=0.0015  Score=51.03  Aligned_cols=68  Identities=16%  Similarity=0.177  Sum_probs=40.1

Q ss_pred             ccCcCcCceEEEEEEcC--------CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCce-eeeeceEEeCCeEEEEEec
Q 048219           35 KVGRGSSGTVYKGAMIN--------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL-VRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~--------~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~  105 (183)
                      .++.|....+|++....        +..+.+|+......  ...+..|..+++.+...++ +++++.+.  +  .+++||
T Consensus        80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e~  153 (429)
T 1nw1_A           80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEEY  153 (429)
T ss_dssp             EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEECC
T ss_pred             EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEEE
Confidence            45667777899887542        35677777633111  1234468888877743233 45555432  2  388999


Q ss_pred             cCC
Q 048219          106 MSN  108 (183)
Q Consensus       106 ~~~  108 (183)
                      ++|
T Consensus       154 l~G  156 (429)
T 1nw1_A          154 IPS  156 (429)
T ss_dssp             CCE
T ss_pred             eCC
Confidence            876

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=94.98  E-value=0.0026  Score=47.41  Aligned_cols=33  Identities=15%  Similarity=0.275  Sum_probs=27.8

Q ss_pred             CCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ..++|+|+.+.||+++.++.+.++||+.|..+.
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~g~  219 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFACNDL  219 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCEEEE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhccCch
Confidence            468999999999999987666899999887653

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=94.50  E-value=0.0077  Score=44.92  Aligned_cols=32  Identities=22%  Similarity=0.113  Sum_probs=27.1

Q ss_pred             CCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      ..++|+|+++.||+++ + .+.++||+.|..+..
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g~~  226 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDARNGPA  226 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCCEECT
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCCcCcH
Confidence            3679999999999998 4 789999998876643

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=94.17  E-value=0.0069  Score=45.73  Aligned_cols=34  Identities=15%  Similarity=0.119  Sum_probs=29.2

Q ss_pred             CCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      ..++|+|+.+.|++++.++.+.++||+.+..+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~~  239 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPK  239 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEEECT
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeCCH
Confidence            4689999999999999878899999988876543

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=93.07  E-value=0.016  Score=44.04  Aligned_cols=32  Identities=13%  Similarity=0.138  Sum_probs=26.0

Q ss_pred             CCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ..++|+|+.+.||+++.++ +.++||..|..+.
T Consensus       212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~g~  243 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTNKC-LRLIDFEYSGFNF  243 (369)
T ss_dssp             EEEECSCCCGGGEEECC-C-EEECCCTTCEEEE
T ss_pred             eEEEeCCCCcccEEecCCc-EEEEEecCCCCCc
Confidence            3689999999999998655 7999998887553

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=92.38  E-value=0.042  Score=43.35  Aligned_cols=70  Identities=10%  Similarity=0.070  Sum_probs=38.9

Q ss_pred             ccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCce-eeeeceEEeCCeEEEEEeccCCC
Q 048219           35 KVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL-VRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      .|+.|....+|+....+ +..+.+|...... ...-....|..++..+...++ +++++.+  .+  .+++||++|.
T Consensus       115 ~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~  186 (458)
T 2qg7_A          115 IINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGY  186 (458)
T ss_dssp             EECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSE
T ss_pred             EcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCc
Confidence            45566667788877654 3566677653211 000112467888887764444 4555554  22  3599999864

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=90.19  E-value=0.11  Score=40.11  Aligned_cols=31  Identities=19%  Similarity=0.197  Sum_probs=25.8

Q ss_pred             CceecCCCCCCEEe------cCCCcccccceeccccc
Q 048219          148 QIIHCDIKPQNILM------DENRCAKNFRLWIGKVD  178 (183)
Q Consensus       148 ~i~H~dl~~~nil~------~~~~~~~i~dfg~a~~~  178 (183)
                      .++|+|+.+.||++      ++.+.+.++||-.|...
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n  281 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN  281 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccCC
Confidence            46899999999999      34567899999988754

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=88.49  E-value=0.13  Score=40.10  Aligned_cols=32  Identities=13%  Similarity=0.192  Sum_probs=27.5

Q ss_pred             CCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       147 ~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ..++|+|+.+.|++ +.++.+.++||..|....
T Consensus       262 ~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~~  293 (424)
T 3mes_A          262 LVFAHNDLQENNLL-QTQNNIRMIDYEYSAINF  293 (424)
T ss_dssp             EEEECSCCCGGGEE-ECSSCEEECCCTTCEEEE
T ss_pred             ceEECCCCCcccee-cCCCcEEEEecccCCcCC
Confidence            46799999999999 777889999999887653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	183
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-36
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-34
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	9e-34
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-33
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-33
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	9e-33
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-32
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-32
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-31
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-31
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-31
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-29
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-29
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-29
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-29
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-29
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-29
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-28
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-28
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-28
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-28
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-28
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-27
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-27
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-27
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-27
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-27
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-27
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-26
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-26
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-26
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-26
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-26
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	5e-25
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	9e-25
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-24
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-24
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-23
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-23
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-23
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-23
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-23
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-23
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	8e-23
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-22
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	9e-22
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-21
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-21
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-20
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-20
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	9e-20
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-19
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-19
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-19
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	9e-19
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-18
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-18
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-18
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-17
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-16
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-16
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-15
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	7e-15

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 6e-36
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 4/137 (2%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
             +++G GS GTVYKG       V +  +     ++ + F+ E+ V+ +T H N++  +G
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
           YS    +  +V ++    SL   L   E +   I+   IAR  A+G+ YLH +    IIH
Sbjct: 72  YSTA-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 127

Query: 152 CDIKPQNILMDENRCAK 168
            D+K  NI + E+   K
Sbjct: 128 RDLKSNNIFLHEDLTVK 144

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  121 bits (304), Expect = 1e-34
 Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 19/165 (11%)

Query: 20  FSYAELKKITDGF-----------KEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVL 64
           F++ +  +    F           ++ +G G  G V  G +         VA+  L+   
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 65  DERE-REFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN 123
            E++ R+F +E  ++G+  H N++ L G   + +  +++ E+M NGSL   L   + Q  
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 126

Query: 124 WIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            I+  G+ R IA G+ YL D      +H D+  +NIL++ N   K
Sbjct: 127 VIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCK 168

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 9e-34
 Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 4/137 (2%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           F +++G G  G V+ G  +N+  VA+  + +     E +F  E +V+ +  H  LV+L G
Sbjct: 9   FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYG 67

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
             LE +   LV+E+M +G L+D L             G+  D+  G+ YL + C   +IH
Sbjct: 68  VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124

Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N L+ EN+  K
Sbjct: 125 RDLAARNCLVGENQVIK 141

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 2e-33
 Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 8/140 (5%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
             + +G+G  G V  G       VAV  ++   D   + F  E  V+ +  H NLV+LLG
Sbjct: 11  LLQTIGKGEFGDVMLG-DYRGNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLG 67

Query: 92  YSLEVSKKI-LVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQI 149
             +E    + +V EYM+ GSL D L +  +           + D+   + YL        
Sbjct: 68  VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---F 124

Query: 150 IHCDIKPQNILMDENRCAKN 169
           +H D+  +N+L+ E+  AK 
Sbjct: 125 VHRDLAARNVLVSEDNVAKV 144

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 3e-33
 Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 9/149 (6%)

Query: 24  ELKKITDGFK--EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDERERE-FQTEIKVIG 79
           ELK   D F+   ++G G+ G V+K +   +  ++A   +   +    R     E++V+ 
Sbjct: 2   ELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59

Query: 80  RTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGIL 139
             +   +V   G      +  +  E+M  GSL  +L  A + P       ++  + +G+ 
Sbjct: 60  ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP-EQILGKVSIAVIKGLT 118

Query: 140 YLHDECETQIIHCDIKPQNILMDENRCAK 168
           YL ++   +I+H D+KP NIL++     K
Sbjct: 119 YLREKH--KIMHRDVKPSNILVNSRGEIK 145

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (289), Expect = 9e-33
 Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 4/137 (2%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           F +++G G  G V  G    +  VA+  +++     E EF  E KV+    H  LV+L G
Sbjct: 8   FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYG 66

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
              +     ++ EYM+NG L + L     +    +   + +D+   + YL  +     +H
Sbjct: 67  VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 123

Query: 152 CDIKPQNILMDENRCAK 168
            D+  +N L+++    K
Sbjct: 124 RDLAARNCLVNDQGVVK 140

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 1e-32
 Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 4/138 (2%)

Query: 32  FKEKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
              ++G G+ G VYK        L A   ++   +E   ++  EI ++    H N+V+LL
Sbjct: 16  IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 75

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
                 +   ++ E+ + G++  ++   E+     +   + +     + YLH   + +II
Sbjct: 76  DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKII 132

Query: 151 HCDIKPQNILMDENRCAK 168
           H D+K  NIL   +   K
Sbjct: 133 HRDLKAGNILFTLDGDIK 150

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (289), Expect = 1e-32
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
             E++G G  G V+ G       VAV  L++     +  F  E  ++ +  H+ LVRL  
Sbjct: 17  LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA 75

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQII 150
              +     ++ EYM NGSL D L           +   +A  IA G+ ++ +      I
Sbjct: 76  VVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131

Query: 151 HCDIKPQNILMDENRCAK 168
           H D++  NIL+ +    K
Sbjct: 132 HRDLRAANILVSDTLSCK 149

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 3e-31
 Identities = 28/134 (20%), Positives = 61/134 (45%), Gaps = 8/134 (5%)

Query: 35  KVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
           ++G G+ G+V +G    R     VA+  L++  ++ + E    E +++ +  +  +VRL+
Sbjct: 16  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 75

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
           G   +    +LV E    G L   L    ++        +   ++ G+ YL ++     +
Sbjct: 76  GV-CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFV 131

Query: 151 HCDIKPQNILMDEN 164
           H D+  +N+L+   
Sbjct: 132 HRDLAARNVLLVNR 145

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (280), Expect = 5e-31
 Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 9/149 (6%)

Query: 26  KKITDGFKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGR 80
             +   F E +GRG  G VY G +++    +   AV  L ++ D  E  +F TE  ++  
Sbjct: 25  SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 84

Query: 81  THHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGIL 139
             H N++ LLG  L       +V  YM +G L + + N    P   +  G    +A+G  
Sbjct: 85  FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG-- 142

Query: 140 YLHDECETQIIHCDIKPQNILMDENRCAK 168
            +      + +H D+  +N ++DE    K
Sbjct: 143 -MKFLASKKFVHRDLAARNCMLDEKFTVK 170

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  111 bits (279), Expect = 7e-31
 Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 8/139 (5%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRL 89
            ++G GS G VY    + N ++VA+ ++       +E+ ++   E++ + +  H N ++ 
Sbjct: 21  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
            G  L      LV EY    +   +  + +K    +E   +     +G+ YLH      +
Sbjct: 81  RGCYLREHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH---NM 136

Query: 150 IHCDIKPQNILMDENRCAK 168
           IH D+K  NIL+ E    K
Sbjct: 137 IHRDVKAGNILLSEPGLVK 155

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  109 bits (274), Expect = 1e-29
 Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 4/135 (2%)

Query: 32  FKEKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
             E++G G+ G V++          A   +    +  +   + EI+ +    H  LV L 
Sbjct: 30  IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 89

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
               + ++ +++YE+MS G L + + +   + +  E     R + +G+ ++H+      +
Sbjct: 90  DAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YV 146

Query: 151 HCDIKPQNILMDENR 165
           H D+KP+NI+    R
Sbjct: 147 HLDLKPENIMFTTKR 161

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  108 bits (270), Expect = 1e-29
 Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 6/139 (4%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
            K K+G G  G VY+G        VAV  L++   E E EF  E  V+    H NLV+LL
Sbjct: 21  MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 79

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQI 149
           G         ++ E+M+ G+L D L    +Q  + +    +A  I+  + YL  +     
Sbjct: 80  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 136

Query: 150 IHCDIKPQNILMDENRCAK 168
           IH D+  +N L+ EN   K
Sbjct: 137 IHRDLAARNCLVGENHLVK 155

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 1e-29
 Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 6/137 (4%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
           EK+G+G+SGTVY    +   Q VA+ ++      ++     EI V+    + N+V  L  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 93  SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
            L   +  +V EY++ GSL D++   E   +  +   + R+  + + +LH     Q+IH 
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSN---QVIHR 140

Query: 153 DIKPQNILMDENRCAKN 169
           DIK  NIL+  +   K 
Sbjct: 141 DIKSDNILLGMDGSVKL 157

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 1e-29
 Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 13/146 (8%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
            +E +G+G  G V++G     + VAV       +ER    + EI       H N++  + 
Sbjct: 7   LQESIGKGRFGEVWRG-KWRGEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGFIA 64

Query: 92  YSLEVSKKI----LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC-- 145
              + +       LV +Y  +GSL D L              +A   A G+ +LH E   
Sbjct: 65  ADNKDNGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVG 122

Query: 146 ---ETQIIHCDIKPQNILMDENRCAK 168
              +  I H D+K +NIL+ +N    
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCC 148

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 4e-29
 Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 6/138 (4%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
            + K+G+G  G V+ G       VA+  L+      E  F  E +V+ +  H  LV+L  
Sbjct: 21  LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA 79

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQII 150
             +      +V EYMS GSL D L     +     +   +A  IA G+ Y+        +
Sbjct: 80  V-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 135

Query: 151 HCDIKPQNILMDENRCAK 168
           H D++  NIL+ EN   K
Sbjct: 136 HRDLRAANILVGENLVCK 153

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 5e-29
 Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 32  FKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVLDERERE-FQTEIKVIGR-THH 83
           F + +G G+ G V +              VAV  L+      ERE   +E+KV+    +H
Sbjct: 27  FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILF-----------------NAEKQPNWIE 126
            N+V LLG        +++ EY   G L + L                  + E   +  +
Sbjct: 87  MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146

Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
               +  +A+G+ +L  +     IH D+  +NIL+   R  K
Sbjct: 147 LLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITK 185

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  107 bits (267), Expect = 1e-28
 Identities = 30/146 (20%), Positives = 66/146 (45%), Gaps = 6/146 (4%)

Query: 26  KKITDGFK--EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH 82
             + D +   E++G G+ G V++       ++     +       +   + EI ++ + H
Sbjct: 25  GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH 84

Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH 142
           H  L+ L     +  + +L+ E++S G L D +   + + +  E     R    G+ ++H
Sbjct: 85  HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 144

Query: 143 DECETQIIHCDIKPQNILMDENRCAK 168
           +     I+H DIKP+NI+ +  + + 
Sbjct: 145 EH---SIVHLDIKPENIMCETKKASS 167

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 1e-28
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLV 87
               +G+G  G VY      ++ ++A+  L K        E + + E+++     H N++
Sbjct: 10  IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 69

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
           RL GY  + ++  L+ EY   G++   L    K            ++A  + Y H +   
Sbjct: 70  RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD-EQRTATYITELANALSYCHSK--- 125

Query: 148 QIIHCDIKPQNILMDENRCAK 168
           ++IH DIKP+N+L+      K
Sbjct: 126 RVIHRDIKPENLLLGSAGELK 146

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 1e-28
 Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 9/140 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRL--EKVLDEREREFQTEIKVIGRTHHRNLVR 88
           F  ++GRGS  TVYKG        VA   L   K+     + F+ E +++    H N+VR
Sbjct: 13  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 72

Query: 89  LLGYSLEVSKK----ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
                    K     +LV E M++G+L   L    K           R I +G+ +LH  
Sbjct: 73  FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR-FKVMKIKVLRSWCRQILKGLQFLHTR 131

Query: 145 CETQIIHCDIKPQNILMDEN 164
               IIH D+K  NI +   
Sbjct: 132 TP-PIIHRDLKCDNIFITGP 150

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 2e-28
 Identities = 27/147 (18%), Positives = 59/147 (40%), Gaps = 10/147 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEK--VLDEREREFQTEIKVIGRTHHRNLVR 88
               +G GS G   K     + +++    L+   + +  ++   +E+ ++    H N+VR
Sbjct: 8   VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 67

Query: 89  LLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQP---NWIERTGIARDIARGILYLHD 143
                ++ +   L  V EY   G LA ++    K+    +      +   +   +   H 
Sbjct: 68  YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 127

Query: 144 --ECETQIIHCDIKPQNILMDENRCAK 168
             +    ++H D+KP N+ +D  +  K
Sbjct: 128 RSDGGHTVLHRDLKPANVFLDGKQNVK 154

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 6e-28
 Identities = 35/166 (21%), Positives = 66/166 (39%), Gaps = 33/166 (19%)

Query: 32  FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERERE-FQTEIKVIGR-THH 83
           F + +G G+ G V                VAV  L++  D  ERE   +E+K++ +   H
Sbjct: 41  FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 100

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN-------------------- 123
            N+V LLG         L++EY   G L + L +  ++ +                    
Sbjct: 101 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 160

Query: 124 --WIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCA 167
             + +    A  +A+G+ +L  +     +H D+  +N+L+   +  
Sbjct: 161 LTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVV 203

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 1e-27
 Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 6/139 (4%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEK-VLDEREREFQTEIKVIGRTHHRNLVRL 89
             + +G G+ G V         + VAV  ++     +     + EI +    +H N+V+ 
Sbjct: 9   LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 68

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
            G+  E + + L  EY S G L D +      P   +       +  G++YLH      I
Sbjct: 69  YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP-EPDAQRFFHQLMAGVVYLHGIG---I 124

Query: 150 IHCDIKPQNILMDENRCAK 168
            H DIKP+N+L+DE    K
Sbjct: 125 THRDIKPENLLLDERDNLK 143

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (254), Expect = 2e-27
 Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 11/144 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHR 84
             EK+G GS G V +G           VAV  L+  +    E   +F  E+  +    HR
Sbjct: 12  LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
           NL+RL G  L      +V E    GSL D L   +        +  A  +A G+ YL  +
Sbjct: 72  NLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 130

Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
                IH D+  +N+L+      K
Sbjct: 131 R---FIHRDLAARNLLLATRDLVK 151

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (254), Expect = 3e-27
 Identities = 36/149 (24%), Positives = 56/149 (37%), Gaps = 10/149 (6%)

Query: 26  KKITDGFK--EKVGRGSSGTVYKG-AMINRQLVAVNRLEK---VLDEREREFQTEIKVIG 79
           KK  + FK  + +G GS  TV     +   +  A+  LEK   + + +      E  V+ 
Sbjct: 4   KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63

Query: 80  RTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGIL 139
           R  H   V+L     +  K      Y  NG L   +                   A  + 
Sbjct: 64  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAEIVS 119

Query: 140 YLHDECETQIIHCDIKPQNILMDENRCAK 168
            L       IIH D+KP+NIL++E+   +
Sbjct: 120 ALEYLHGKGIIHRDLKPENILLNEDMHIQ 148

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (252), Expect = 3e-27
 Identities = 31/150 (20%), Positives = 62/150 (41%), Gaps = 9/150 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMINRQ----LVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNL 86
               +G G  G V++G  ++ +     VA+   +    +  RE F  E   + +  H ++
Sbjct: 11  LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70

Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
           V+L+G   E +   ++ E  + G L   L   +   +       A  ++  + YL     
Sbjct: 71  VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---S 126

Query: 147 TQIIHCDIKPQNILMDENRCAKNFRLWIGK 176
            + +H DI  +N+L+  N C K     + +
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 156

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  101 bits (253), Expect = 4e-27
 Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 33/167 (19%)

Query: 32  FKEKVGRGSSGTVYKG------AMINRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHR 84
           +   +G G+ G V++             +VAV  L++      + +FQ E  ++    + 
Sbjct: 17  YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 76

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP---------------------- 122
           N+V+LLG         L++EYM+ G L + L +                           
Sbjct: 77  NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 136

Query: 123 -NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            +  E+  IAR +A G+ YL    E + +H D+  +N L+ EN   K
Sbjct: 137 LSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVK 180

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 4e-27
 Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 23/157 (14%)

Query: 32  FKEKVGRGSSGTVYKGAMIN---RQLVAVNRLEKVLDERE-REFQTEIKVIGR-THHRNL 86
           F++ +G G+ G V K  +     R   A+ R+++   + + R+F  E++V+ +  HH N+
Sbjct: 14  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 73

Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP---------------NWIERTGIA 131
           + LLG         L  EY  +G+L D L  +                   +  +    A
Sbjct: 74  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 133

Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            D+ARG+ YL    + Q IH D+  +NIL+ EN  AK
Sbjct: 134 ADVARGMDYL---SQKQFIHRDLAARNILVGENYVAK 167

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 2e-26
 Identities = 27/146 (18%), Positives = 66/146 (45%), Gaps = 7/146 (4%)

Query: 26  KKITDGFK--EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTH 82
           K++ + +   E +GRG  G V++     +++      ++    ++    + EI ++    
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL-VKKEISILNIAR 59

Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH 142
           HRN++ L      + + ++++E++S   + + +  +  + N  E       +   + +LH
Sbjct: 60  HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119

Query: 143 DECETQIIHCDIKPQNILMDENRCAK 168
                 I H DI+P+NI+    R + 
Sbjct: 120 SH---NIGHFDIRPENIIYQTRRSST 142

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =   99 bits (248), Expect = 2e-26
 Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 9/143 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-----RQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRN 85
            ++ +G G  G VYKG +          VA+  L+    E++R +F  E  ++G+  H N
Sbjct: 11  RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 70

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           ++RL G   +    +++ EYM NG+L   L   + + + ++  G+ R IA G+ YL +  
Sbjct: 71  IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 130

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
               +H D+  +NIL++ N   K
Sbjct: 131 ---YVHRDLAARNILVNSNLVCK 150

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.8 bits (248), Expect = 2e-26
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 10/139 (7%)

Query: 35  KVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDERE--REFQTEIKVIGRTHHRNLVRL 89
           ++G G+ GTV KG    +   + VAV  L+   ++     E   E  V+ +  +  +VR+
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
           +G   E    +LV E    G L   L    +         +   ++ G+ YL +      
Sbjct: 74  IGIC-EAESWMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEESN---F 128

Query: 150 IHCDIKPQNILMDENRCAK 168
           +H D+  +N+L+     AK
Sbjct: 129 VHRDLAARNVLLVTQHYAK 147

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.5 bits (247), Expect = 4e-26
 Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 19/153 (12%)

Query: 32  FKEKVGRGSSGTVYKG------AMINRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHR 84
              ++G+GS G VY+G             VA+  + +    RER EF  E  V+   +  
Sbjct: 24  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 83

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQ---------PNWIERTGIARDIA 135
           ++VRLLG   +    +++ E M+ G L   L +             P+  +   +A +IA
Sbjct: 84  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 143

Query: 136 RGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
            G+ YL+     + +H D+  +N ++ E+   K
Sbjct: 144 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 173

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.1 bits (246), Expect = 5e-26
 Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 10/143 (6%)

Query: 32  FKEKVGRGSSGTVYKGAMIN-----RQLVAVNRLEKVLDER-EREFQTEIKVIGRTHHRN 85
             + +G G+ GTVYKG  I      +  VA+  L +    +  +E   E  V+    + +
Sbjct: 13  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 72

Query: 86  LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
           + RLLG  L  S   L+ + M  G L D +   +              IA+G+ YL D  
Sbjct: 73  VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR- 130

Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
             +++H D+  +N+L+   +  K
Sbjct: 131 --RLVHRDLAARNVLVKTPQHVK 151

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.2 bits (241), Expect = 5e-25
 Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 24/157 (15%)

Query: 17  PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEI 75
           P   SY + K I        G GS G VY+  +  + +LVA+    K + + +R    E+
Sbjct: 17  PQEVSYTDTKVI--------GNGSFGVVYQAKLCDSGELVAI----KKVLQDKRFKNREL 64

Query: 76  KVIGRTHHRNLVRLLGYSLEVSKK------ILVYEYMSNGSLADILFNAEKQP--NWIER 127
           +++ +  H N+VRL  +     +K       LV +Y+           +  +     I  
Sbjct: 65  QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124

Query: 128 TGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
                 + R + Y+H      I H DIKPQN+L+D +
Sbjct: 125 KLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPD 158

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.3 bits (236), Expect = 9e-25
 Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 28/170 (16%)

Query: 32  FKEKVGRGSSGTVYKG--------AMINRQLVAVNRLEKVLDERE-REFQTEIKVIGR-T 81
             + +G G+ G V                  VAV  L+    E++  +  +E++++    
Sbjct: 17  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76

Query: 82  HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILF---------------NAEKQPNWIE 126
            H+N++ LLG   +     ++ EY S G+L + L                N E+Q +  +
Sbjct: 77  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 136

Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK 176
               A  +ARG+ YL  +   + IH D+  +N+L+ E+   K     + +
Sbjct: 137 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR 183

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 96.0 bits (238), Expect = 1e-24
 Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 11/144 (7%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEK---VLDEREREFQTE---IKVIGRTHHR 84
               +GRG  G VY        ++ A+  L+K    + + E     E   + ++      
Sbjct: 8   VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 67

Query: 85  NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
            +V +        K   + + M+ G L   L       +  +    A +I  G+ ++H+ 
Sbjct: 68  FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMHNR 126

Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
               +++ D+KP NIL+DE+   +
Sbjct: 127 F---VVYRDLKPANILLDEHGHVR 147

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 93.6 bits (232), Expect = 6e-24
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 8/145 (5%)

Query: 22  YAELKKITDGFK--EKVGRGSSGTVYKG-AMINRQLVAVNRLEK-VLDEREREFQTEIKV 77
           + + + I D +   + +G G+   V        ++LVA+  + K  L+ +E   + EI V
Sbjct: 1   WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 60

Query: 78  IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARG 137
           + +  H N+V L           L+ + +S G L D +   +      + + +   +   
Sbjct: 61  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTERDASRLIFQVLDA 119

Query: 138 ILYLHDECETQIIHCDIKPQNILMD 162
           + YLHD     I+H D+KP+N+L  
Sbjct: 120 VKYLHDLG---IVHRDLKPENLLYY 141

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 92.8 bits (230), Expect = 1e-23
 Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 8/141 (5%)

Query: 32  FKEKVGRGSSGTVYKG-AMINRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLV 87
               +G GS G V+   +  N +  A+  L+K +    ++      E  ++    H  ++
Sbjct: 8   ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFII 67

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
           R+ G   +  +  ++ +Y+  G L  +L  +++ PN + +   A ++   + YLH +   
Sbjct: 68  RMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLHSKD-- 124

Query: 148 QIIHCDIKPQNILMDENRCAK 168
            II+ D+KP+NIL+D+N   K
Sbjct: 125 -IIYRDLKPENILLDKNGHIK 144

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 91.7 bits (227), Expect = 2e-23
 Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 15/148 (10%)

Query: 32  FKEKVGRGSSGTVYKG-AMINRQLVAVNRLEKV---------LDEREREFQTEIKVIGRT 81
            KE +GRG S  V +       +  AV  ++           + E       E+ ++ + 
Sbjct: 7   PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 66

Query: 82  H-HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILY 140
             H N+++L       +   LV++ M  G L D L   +   +  E   I R +   I  
Sbjct: 67  SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICA 125

Query: 141 LHDECETQIIHCDIKPQNILMDENRCAK 168
           LH      I+H D+KP+NIL+D++   K
Sbjct: 126 LHKLN---IVHRDLKPENILLDDDMNIK 150

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 91.3 bits (226), Expect = 3e-23
 Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 14/161 (8%)

Query: 26  KKITDGFK--EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVL---DEREREFQTEIKVIG 79
             ++D ++  E +G G    V+    +   + VAV  L   L         F+ E +   
Sbjct: 3   SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAA 62

Query: 80  RTHHRNLVRLLGYSLEVSKKI----LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIA 135
             +H  +V +       +       +V EY+   +L DI+              +  D  
Sbjct: 63  ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT-PKRAIEVIADAC 121

Query: 136 RGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK 176
           + + +     +  IIH D+KP NI++      K     I +
Sbjct: 122 QALNFS---HQNGIIHRDVKPANIMISATNAVKVMDFGIAR 159

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.5 bits (226), Expect = 3e-23
 Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 10/141 (7%)

Query: 34  EKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVL-----DEREREFQTEIKVIGRTHHRNLV 87
           + +G G   TVYK    N  Q+VA+ +++        D   R    EIK++    H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
            LL      S   LV+++M       I+ +                  +G+ YLH     
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLE-VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW-- 120

Query: 148 QIIHCDIKPQNILMDENRCAK 168
            I+H D+KP N+L+DEN   K
Sbjct: 121 -ILHRDLKPNNLLLDENGVLK 140

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.7 bits (227), Expect = 3e-23
 Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 9/157 (5%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEK---VLDEREREFQTEIKVIGRT-HHRNL 86
             + +G+GS G V+        Q  A+  L+K   ++D+       E +V+     H  L
Sbjct: 6   LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 65

Query: 87  VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
             +            V EY++ G L   + +  K       T  A +I  G+ +L     
Sbjct: 66  THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFD-LSRATFYAAEIILGLQFL---HS 121

Query: 147 TQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARSD 183
             I++ D+K  NIL+D++   K     + K +     
Sbjct: 122 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 158

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.3 bits (226), Expect = 6e-23
 Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 20/161 (12%)

Query: 24  ELKK--ITDGFK---EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKV 77
           ++KK  I D +K   + +G G +G V +      ++  A+    K+L +  +  + E+++
Sbjct: 3   QIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFAL----KMLQDCPK-ARREVEL 57

Query: 78  IGR-THHRNLVRLLGYSLEVSKK----ILVYEYMSNGSLADILFNAEKQP-NWIERTGIA 131
             R +   ++VR++     +       ++V E +  G L   + +   Q     E + I 
Sbjct: 58  HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 117

Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL 172
           + I   I YLH      I H D+KP+N+L    R     +L
Sbjct: 118 KSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKL 155

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.0 bits (225), Expect = 8e-23
 Identities = 29/149 (19%), Positives = 62/149 (41%), Gaps = 13/149 (8%)

Query: 28  ITDGFK--EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHH 83
           +   +     +G G+ G V      +N+  VA+ ++     +   +    EIK++ R  H
Sbjct: 6   VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 65

Query: 84  RNLVRLLGY----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGIL 139
            N++ +       ++E  K + +  ++    L  +L    +  +          I RG+ 
Sbjct: 66  ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT--QHLSNDHICYFLYQILRGLK 123

Query: 140 YLHDECETQIIHCDIKPQNILMDENRCAK 168
           Y+H      ++H D+KP N+L++     K
Sbjct: 124 YIHSA---NVLHRDLKPSNLLLNTTCDLK 149

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.6 bits (221), Expect = 2e-22
 Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 27/161 (16%)

Query: 32  FKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEK-VLDEREREFQTEIKVIGRT-HH 83
             + +GRG+ G V +            + VAV  L++       R   +E+K++    HH
Sbjct: 17  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 76

Query: 84  RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQP---------------NWIER 127
            N+V LLG   +    + ++ E+   G+L+  L +   +                     
Sbjct: 77  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 136

Query: 128 TGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
              +  +A+G+ +L      + IH D+  +NIL+ E    K
Sbjct: 137 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVK 174

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 87.2 bits (215), Expect = 9e-22
 Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 6/137 (4%)

Query: 34  EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
           EK+G G+ G VYK      +  A+   RLEK  +        EI ++    H N+V+L  
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67

Query: 92  YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
                 + +LV+E++       +    E     +        +  GI Y HD     ++H
Sbjct: 68  VIHTKKRLVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRR---VLH 123

Query: 152 CDIKPQNILMDENRCAK 168
            D+KPQN+L++     K
Sbjct: 124 RDLKPQNLLINREGELK 140

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.5 bits (213), Expect = 2e-21
 Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 6/139 (4%)

Query: 34  EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
           EK+G G+ G VYK    +  ++VA+   RL+   +        EI ++   +H N+V+LL
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
                 +K  LV+E++       +  +A               + +G+ + H      ++
Sbjct: 68  DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 124

Query: 151 HCDIKPQNILMDENRCAKN 169
           H D+KPQN+L++     K 
Sbjct: 125 HRDLKPQNLLINTEGAIKL 143

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.5 bits (213), Expect = 3e-21
 Identities = 32/158 (20%), Positives = 61/158 (38%), Gaps = 15/158 (9%)

Query: 34  EKVGRGSSGTVYKGAMI--NRQLVAVNRL--EKVLDEREREFQTEIKV---IGRTHHRNL 86
            ++G G+ G V+K   +    + VA+ R+  +   +        E+ V   +    H N+
Sbjct: 13  AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 72

Query: 87  VRLLGYSLEVSKK-----ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
           VRL                LV+E++       +    E          +   + RG+ +L
Sbjct: 73  VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 132

Query: 142 HDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
           H      ++H D+KPQNIL+  +   K     + ++  
Sbjct: 133 HSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYS 167

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 84.1 bits (207), Expect = 2e-20
 Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 8/146 (5%)

Query: 27  KITDGFK--EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
           ++ + ++   K+G GS G +Y G  +   + VA+         +  +   E K+      
Sbjct: 4   RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECV--KTKHPQLHIESKIYKMMQG 61

Query: 84  RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
              +  + +        ++   +   SL D+     ++ +      +A  +   I Y+H 
Sbjct: 62  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121

Query: 144 ECETQIIHCDIKPQNILMDENRCAKN 169
           +     IH D+KP N LM   +    
Sbjct: 122 K---NFIHRDVKPDNFLMGLGKKGNL 144

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.8 bits (204), Expect = 4e-20
 Identities = 26/144 (18%), Positives = 49/144 (34%), Gaps = 12/144 (8%)

Query: 32  FKEKVGRGSSGTVYKG-AMINRQLVAVNRLEKVL------DEREREFQTEIKVIGR--TH 82
               +G G  G+VY G  + +   VA+  +EK                 E+ ++ +  + 
Sbjct: 8   VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67

Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH 142
              ++RLL +       +L+ E                             +   + +  
Sbjct: 68  FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 126

Query: 143 DECETQIIHCDIKPQNILMDENRC 166
                 ++H DIK +NIL+D NR 
Sbjct: 127 --HNCGVLHRDIKDENILIDLNRG 148

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.5 bits (203), Expect = 9e-20
 Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 8/141 (5%)

Query: 32  FKEKVGRGSSGTVYKG-AMINRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLV 87
           + + +G+G+ G V         +  A+  L K +    +      TE +V+  T H  L 
Sbjct: 9   YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68

Query: 88  RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
            L        +   V EY + G L   L           R     +I      L      
Sbjct: 69  ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSA---LEYLHSR 124

Query: 148 QIIHCDIKPQNILMDENRCAK 168
            +++ DIK +N+++D++   K
Sbjct: 125 DVVYRDIKLENLMLDKDGHIK 145

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.5 bits (203), Expect = 1e-19
 Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 8/135 (5%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEK--VLDERERE-FQTEIKVIGRTHHRNLVRL 89
           + +G GS G V       +    A+  L+K  V+  ++ E    E +++   +   LV+L
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106

Query: 90  LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
                + S   +V EY++ G +   L    +          A  I     YLH      +
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSL---DL 162

Query: 150 IHCDIKPQNILMDEN 164
           I+ D+KP+N+L+D+ 
Sbjct: 163 IYRDLKPENLLIDQQ 177

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.3 bits (200), Expect = 2e-19
 Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 13/152 (8%)

Query: 26  KKITDGFK--EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDERER------EFQTEIK 76
           + + D +   E++G G    V K          A   ++K   +  R      + + E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65

Query: 77  VIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIAR 136
           ++    H N++ L       +  IL+ E ++ G L D L   ++     E T   + I  
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQILN 124

Query: 137 GILYLHDECETQIIHCDIKPQNILMDENRCAK 168
           G   ++     QI H D+KP+NI++ +    K
Sbjct: 125 G---VYYLHSLQIAHFDLKPENIMLLDRNVPK 153

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.0 bits (196), Expect = 5e-19
 Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 7/147 (4%)

Query: 34  EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDERE--REFQTEIKVIGRTHHRNLVRLL 90
           EK+G G+ GTV+K       ++VA+ R+    D+         EI ++    H+N+VRL 
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
                  K  LV+E+           +     +          + +G+ + H      ++
Sbjct: 68  DVLHSDKKLTLVFEFCDQDLKKYF-DSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VL 123

Query: 151 HCDIKPQNILMDENRCAKNFRLWIGKV 177
           H D+KPQN+L++ N   K     + + 
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLARA 150

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 79.5 bits (195), Expect = 9e-19
 Identities = 23/144 (15%), Positives = 58/144 (40%), Gaps = 6/144 (4%)

Query: 32  FKEKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
              ++G GS G +++G  ++N Q VA+    +       + + E +          +  +
Sbjct: 9   VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPR--RSDAPQLRDEYRTYKLLAGCTGIPNV 66

Query: 91  GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
            Y  +     ++   +   SL D+L    ++ +       A+ +   +  +H++    ++
Sbjct: 67  YYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LV 123

Query: 151 HCDIKPQNILMDENRCAKNFRLWI 174
           + DIKP N L+          +++
Sbjct: 124 YRDIKPDNFLIGRPNSKNANMIYV 147

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.6 bits (195), Expect = 1e-18
 Identities = 30/146 (20%), Positives = 59/146 (40%), Gaps = 15/146 (10%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRL--EKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
            K+G+G+ G V+K       Q VA+ ++  E   +        EIK++    H N+V L+
Sbjct: 16  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 75

Query: 91  GYSLEVSKKI--------LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH 142
                 +           LV+++  +     +  N   +    E   + + +  G   L+
Sbjct: 76  EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNG---LY 131

Query: 143 DECETQIIHCDIKPQNILMDENRCAK 168
                +I+H D+K  N+L+  +   K
Sbjct: 132 YIHRNKILHRDMKAANVLITRDGVLK 157

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.5 bits (195), Expect = 1e-18
 Identities = 35/172 (20%), Positives = 64/172 (37%), Gaps = 21/172 (12%)

Query: 20  FSYAELKKITDGFK------EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERE--RE 70
           F   E+ K     +      + VG G+ G V           VA+ +L +        + 
Sbjct: 4   FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 63

Query: 71  FQTEIKVIGRTHHRNLVRLLGYSLE------VSKKILVYEYMSNGSLADILFNAEKQPNW 124
              E++++    H N++ LL            +   LV  +M  G+    L   EK    
Sbjct: 64  AYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLG-E 120

Query: 125 IERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK 176
                +   + +G+ Y+H      IIH D+KP N+ ++E+   K     + +
Sbjct: 121 DRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 169

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (190), Expect = 6e-18
 Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 19/170 (11%)

Query: 19  SFSYAELKK----ITDGFK--EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDERE--R 69
           +F   EL K    + + ++    VG G+ G+V           VAV +L +        +
Sbjct: 3   TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 62

Query: 70  EFQTEIKVIGRTHHRNLVRLLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNW 124
               E++++    H N++ LL       SLE    + +  ++    L +I     ++   
Sbjct: 63  RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI--VKCQKLTD 120

Query: 125 IERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWI 174
                +   I RG+ Y+H      IIH D+KP N+ ++E+   K     +
Sbjct: 121 DHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGL 167

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 76.0 bits (186), Expect = 2e-17
 Identities = 29/139 (20%), Positives = 60/139 (43%), Gaps = 14/139 (10%)

Query: 32  FKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRL 89
              K+GRG    V++   I N + V V  L+     ++++ + EIK++       N++ L
Sbjct: 39  LVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITL 95

Query: 90  LGYSLEVSKK--ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
                +   +   LV+E+++N     +     +     +      +I + + Y H     
Sbjct: 96  ADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHSMG-- 149

Query: 148 QIIHCDIKPQNILMDENRC 166
            I+H D+KP N+++D    
Sbjct: 150 -IMHRDVKPHNVMIDHEHR 167

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 1e-16
 Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 13/142 (9%)

Query: 32  FKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDERE----REFQTEIKVIGR-TH 82
             + +G G+ G V+    I      +L A+  L+K    ++       +TE +V+     
Sbjct: 28  LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ 87

Query: 83  HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH 142
              LV L       +K  L+ +Y++ G L   L   E+         +   +   +L L 
Sbjct: 88  SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE----VQIYVGEIVLALE 143

Query: 143 DECETQIIHCDIKPQNILMDEN 164
              +  II+ DIK +NIL+D N
Sbjct: 144 HLHKLGIIYRDIKLENILLDSN 165

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 2e-16
 Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 16/152 (10%)

Query: 34  EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLL 90
           + +G G+ G V      +  + VA+ +L +        +    E+ ++   +H+N++ LL
Sbjct: 23  KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82

Query: 91  GYSL------EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
                     E     LV E M       I    + + +    + +   +  GI +LH  
Sbjct: 83  NVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLCGIKHLHSA 138

Query: 145 CETQIIHCDIKPQNILMDENRCAKNFRLWIGK 176
               IIH D+KP NI++  +   K     + +
Sbjct: 139 G---IIHRDLKPSNIVVKSDCTLKILDFGLAR 167

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 69.7 bits (169), Expect = 4e-15
 Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 19/154 (12%)

Query: 32  FKEKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
              K+G G   TV+    M+N   VA+  +       E   + EIK++ R +  +  +  
Sbjct: 17  LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEA-AEDEIKLLQRVNDADNTKED 75

Query: 91  GYSLEVSKKILVY---------------EYMSNGSLADILFNAEKQPNWIERTGIARDIA 135
                   K+L +               E +    LA I     +    I    I++ + 
Sbjct: 76  SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLL 135

Query: 136 RGILYLHDECETQIIHCDIKPQNILMDENRCAKN 169
            G+ Y+H  C   IIH DIKP+N+LM+     +N
Sbjct: 136 LGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 167

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 67.1 bits (163), Expect = 7e-15
 Identities = 20/151 (13%), Positives = 40/151 (26%), Gaps = 25/151 (16%)

Query: 30  DGFKEKVGRGSSGTVYKGAMINRQLVAV----------NRLEKVLDEREREFQTEIKVIG 79
           D   + +G G    V+           V           ++++  D  +  F        
Sbjct: 2   DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSA 61

Query: 80  RTHHRNLVRLLG----YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIA 135
           R   R L +L G             ++ E +              +        +   I 
Sbjct: 62  RNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKE--------LYRVRVENPDEVLDMIL 113

Query: 136 RGILYLHDECETQIIHCDIKPQNILMDENRC 166
             +   +      I+H D+   N+L+ E   
Sbjct: 114 EEVAKFYHRG---IVHGDLSQYNVLVSEEGI 141

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	183
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.98
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.98
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.98
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.97
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.97
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.97
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.97
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.97
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.97
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.97
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.97
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.97
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.97
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.97
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.97
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.97
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.97
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.97
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.97
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.97
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.97
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.96
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.96
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.96
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.96
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.96
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.96
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.96
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.95
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.95
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.95
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.95
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.91
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.88
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.72
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.15
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.92
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.68
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.6
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.81

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3e-36  Score=223.78  Aligned_cols=151  Identities=27%  Similarity=0.393  Sum_probs=132.4

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEcC-CcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMIN-RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      +....+.+.+.||+|+||.||+|.+.. +..||+|.+.... ...+.+.+|+.+++.++||||+++++++.+.+..+++|
T Consensus        14 i~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~   92 (287)
T d1opja_          14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   92 (287)
T ss_dssp             CCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             ecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEe
Confidence            333456677899999999999999764 7789999986543 23457889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcC-CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          104 EYMSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       104 e~~~~~~l~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ||+++|++.+++... ...+++..+..++.|++.||.|||++   +|+||||||+|||++.++.+||+|||+|+...
T Consensus        93 E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~  166 (287)
T d1opja_          93 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT  166 (287)
T ss_dssp             ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCC
T ss_pred             ecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecC
Confidence            999999999998654 35677888888999999999999998   99999999999999999999999999999764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-35  Score=219.49  Aligned_cols=145  Identities=27%  Similarity=0.360  Sum_probs=130.3

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .|.+.+.||+|+||.||+|... ++..||+|.+..........+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus        21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~  100 (293)
T d1yhwa1          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA  100 (293)
T ss_dssp             TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence            4677789999999999999965 588999999875544445678999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +++|.+++..  ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus       101 gg~L~~~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~  166 (293)
T d1yhwa1         101 GGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI  166 (293)
T ss_dssp             TCBHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CCcHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheee
Confidence            9999998765  3577888889999999999999998   9999999999999999999999999999865

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-36  Score=223.02  Aligned_cols=146  Identities=22%  Similarity=0.348  Sum_probs=131.7

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      |.+.+.||+|+||.||+|... ++..+|+|.+........+.+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus        14 Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~   93 (288)
T d2jfla1          14 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             eEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCC
Confidence            567788999999999999976 5788999998765444556788999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+|.+++......+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus        94 g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~  160 (288)
T d2jfla1          94 GAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN  160 (288)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhcc
Confidence            999998766556688888889999999999999998   9999999999999999999999999999754

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-35  Score=216.93  Aligned_cols=146  Identities=28%  Similarity=0.416  Sum_probs=127.2

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      +.+.+.||+|+||.||+|...++..||+|.+.... .....+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus         7 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g   85 (263)
T d1sm2a_           7 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG   85 (263)
T ss_dssp             EEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             cEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCC
Confidence            45667899999999999999888889999987543 23457889999999999999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +|.+++......+++..+..++.|++.||.|+|++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus        86 ~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~  152 (263)
T d1sm2a_          86 CLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL  152 (263)
T ss_dssp             BHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC------
T ss_pred             cHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheecc
Confidence            99999877666778888889999999999999998   99999999999999999999999999998653

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=7.5e-35  Score=221.66  Aligned_cols=148  Identities=20%  Similarity=0.319  Sum_probs=132.8

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .|.+.+.||+|+||.||+|... ++..+|+|.+..........+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus        30 ~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~  109 (352)
T d1koba_          30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS  109 (352)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            3778889999999999999975 588999999876555556678899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec--CCCcccccceecccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD--ENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~--~~~~~~i~dfg~a~~~~  179 (183)
                      +++|.+.+......+++..+..++.|++.||.|||++   +|+||||||+|||++  ..+.+||+|||+|+...
T Consensus       110 gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~  180 (352)
T d1koba_         110 GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN  180 (352)
T ss_dssp             CCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred             CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecC
Confidence            9999998866556688899999999999999999998   999999999999998  56899999999998654

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-35  Score=216.30  Aligned_cols=145  Identities=26%  Similarity=0.313  Sum_probs=126.9

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      |.+.+.||+|+||.||+|... +++.+|+|.+.... ......+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~   86 (271)
T d1nvra_           7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS   86 (271)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccC
Confidence            567789999999999999976 57899999986542 2233568899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +|+|.+++.. ...+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus        87 gg~L~~~l~~-~~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~  153 (271)
T d1nvra_          87 GGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVF  153 (271)
T ss_dssp             TEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CCcHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheee
Confidence            9999998854 34578888889999999999999998   9999999999999999999999999999865

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-34  Score=210.45  Aligned_cols=146  Identities=23%  Similarity=0.349  Sum_probs=129.4

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH---HHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      |.+.+.||+|+||.||+|... ++..+|+|.+.+....   ....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         8 y~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy   87 (263)
T d2j4za1           8 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY   87 (263)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEee
Confidence            567789999999999999986 5788999998654322   245688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++|+|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus        88 ~~~g~L~~~l~~~-~~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~  157 (263)
T d2j4za1          88 APLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP  157 (263)
T ss_dssp             CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCC
T ss_pred             cCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecC
Confidence            9999999998653 3577888889999999999999998   99999999999999999999999999998654

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.8e-34  Score=219.35  Aligned_cols=148  Identities=20%  Similarity=0.311  Sum_probs=132.9

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      .|.+.+.||+|+||.||+|... ++..+|+|.+..........+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus        27 ~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~  106 (350)
T d1koaa2          27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS  106 (350)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            4678889999999999999975 588999999876655556778899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC--CCcccccceecccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE--NRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~--~~~~~i~dfg~a~~~~  179 (183)
                      +|+|.+.+......+++..+..++.|++.||.|||++   +|+||||||+||+++.  ++.+||+|||+|+...
T Consensus       107 gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~  177 (350)
T d1koaa2         107 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD  177 (350)
T ss_dssp             SCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEECC
T ss_pred             CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchheecc
Confidence            9999999866555688899999999999999999998   9999999999999964  5789999999998654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.1e-34  Score=216.41  Aligned_cols=146  Identities=27%  Similarity=0.453  Sum_probs=123.0

Q ss_pred             hchhcccCcCcCceEEEEEEcC-C---cEEEEEEccch-hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-R---QLVAVNRLEKV-LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~---~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      +.+.+.||+|+||.||+|.... +   ..+++|.+... .....+.+.+|+.+|+.++||||+++++++...+..+++||
T Consensus        28 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~E  107 (299)
T d1jpaa_          28 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITE  107 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence            3445789999999999998653 2   35888887653 23345678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |+++|+|.+++......+++..+..++.|++.||.|||++   +++||||||+||+++.++.+||+|||+|+..
T Consensus       108 y~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~  178 (299)
T d1jpaa_         108 FMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL  178 (299)
T ss_dssp             CCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             ecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEECCCCcEEECCcccceEc
Confidence            9999999998877666788888999999999999999998   9999999999999999999999999999865

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-34  Score=217.76  Aligned_cols=146  Identities=20%  Similarity=0.263  Sum_probs=128.7

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .|.+.+.||+|+||.||+|... ++..+|+|.+.... ......+.+|+.+|+.++||||++++++|.+.+..++||||+
T Consensus         7 ~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~   86 (322)
T d1s9ja_           7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM   86 (322)
T ss_dssp             GEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            4567789999999999999976 57889999986432 233457889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhh-CCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD-ECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++|.+++... ..+++..+..++.|++.||.|||+ +   +|+||||||+||+++.++.+||+|||+|+..
T Consensus        87 ~gg~L~~~l~~~-~~l~~~~~~~~~~qil~aL~yLH~~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~  155 (322)
T d1s9ja_          87 DGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  155 (322)
T ss_dssp             TTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred             CCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHhC---CEEccccCHHHeeECCCCCEEEeeCCCcccc
Confidence            999999998654 347788888899999999999996 5   8999999999999999999999999999854

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-35  Score=215.06  Aligned_cols=147  Identities=27%  Similarity=0.381  Sum_probs=127.4

Q ss_pred             HHhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      ..+.+.+.||+|+||.||+|...++..||+|.+.... .....+.+|+.++++++||||+++++++. .+..++||||++
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~   90 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME   90 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred             HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCC
Confidence            4566778999999999999998888889999987543 23456899999999999999999999764 566799999999


Q ss_pred             CCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          108 NGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +|+|.+.+.... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus        91 ~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~  160 (272)
T d1qpca_          91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE  160 (272)
T ss_dssp             TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEcc
Confidence            999998774432 3478888889999999999999998   99999999999999999999999999998653

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-33  Score=211.66  Aligned_cols=149  Identities=23%  Similarity=0.325  Sum_probs=129.8

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      ..|...+.||+|+||.||+|... ++..||+|.+....   ......+.+|+.+++.++||||+++++++.+.+..+++|
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            34677789999999999999975 57889999986432   233456889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEA  180 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~~  180 (183)
                      ||++++++...+.. ...+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+....
T Consensus        95 E~~~~g~l~~~~~~-~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_          95 EYCLGSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             ECCSEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             EecCCCchHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence            99999888766544 34678888899999999999999998   999999999999999999999999999997643

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-34  Score=208.71  Aligned_cols=146  Identities=24%  Similarity=0.341  Sum_probs=131.0

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (183)
                      +.+.+.||+|+||.||+|..+++..||+|.+.+... ....+.+|+.+++.++||||+++++++.+.+..++||||+++|
T Consensus         6 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g   84 (258)
T d1k2pa_           6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG   84 (258)
T ss_dssp             CCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTE
T ss_pred             CEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCC
Confidence            356688999999999999998888999999875432 3457889999999999999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          110 SLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       110 ~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++..++........+..+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+|+...
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~  151 (258)
T d1k2pa_          85 CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL  151 (258)
T ss_dssp             EHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCS
T ss_pred             cHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheecc
Confidence            99998876666778888889999999999999998   99999999999999999999999999998653

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-34  Score=210.42  Aligned_cols=147  Identities=25%  Similarity=0.252  Sum_probs=130.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||+|... +++.+|+|.+.+...   .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         9 dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmE   88 (288)
T d1uu3a_           9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS   88 (288)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEE
Confidence            3678889999999999999975 578999999875432   123568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |+++|+|.+++... ..+++..+..++.|++.||.|+|++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus        89 y~~gg~L~~~~~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~  159 (288)
T d1uu3a_          89 YAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS  159 (288)
T ss_dssp             CCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             ccCCCCHHHhhhcc-CCCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecc
Confidence            99999999988654 4577888888999999999999998   99999999999999999999999999998653

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-33  Score=207.16  Aligned_cols=147  Identities=28%  Similarity=0.355  Sum_probs=123.9

Q ss_pred             chhcccCcCcCceEEEEEEc-CCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEe----CCeEEEEE
Q 048219           31 GFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLE----VSKKILVY  103 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~  103 (183)
                      .+.+.||+|+||.||+|.+. ++..+|+|.+...  .......+.+|+++++.++||||+++++++.+    ...++++|
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            45668999999999999976 4778999987643  23345678899999999999999999999875    34579999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec-CCCcccccceecccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD-ENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~-~~~~~~i~dfg~a~~~~  179 (183)
                      ||+++++|.+++... ..+++..+..++.|++.||.|||++ ..+|+||||||+||+++ .++.+||+|||+|++..
T Consensus        92 E~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~  166 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  166 (270)
T ss_dssp             ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             eCCCCCcHHHHHhcc-ccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceecc
Confidence            999999999998654 3567888888999999999999987 11399999999999996 57899999999998654

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-33  Score=211.58  Aligned_cols=147  Identities=18%  Similarity=0.269  Sum_probs=130.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +|.+.+.||+|+||.||+|... +++.+|+|.+.... .....+.+|+.+|+.++||||+++++++.+.+.+|+||||++
T Consensus         6 rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~   84 (321)
T d1tkia_           6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS   84 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCC
Confidence            3677889999999999999976 57889999987653 334567899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC--Ccccccceecccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN--RCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~--~~~~i~dfg~a~~~~  179 (183)
                      +++|.+++......+++..+..++.|++.||.|||++   +|+||||||+||+++.+  ..++|+|||+|+...
T Consensus        85 gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~  155 (321)
T d1tkia_          85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK  155 (321)
T ss_dssp             CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhccc
Confidence            9999999976555688889999999999999999998   99999999999999854  479999999998653

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-33  Score=213.01  Aligned_cols=146  Identities=21%  Similarity=0.194  Sum_probs=129.4

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      |.+.+.||+|+||.||+|... +++.+|+|.+.+...   .....+.+|+.+|+.++||||+++++++.+.+.+++||||
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey   86 (337)
T d1o6la_           7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY   86 (337)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceec
Confidence            567789999999999999975 588999999876432   2245688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++|+|.+++... ..+++..+..++.|++.||.|+|++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus        87 ~~gg~L~~~~~~~-~~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~  156 (337)
T d1o6la_          87 ANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI  156 (337)
T ss_dssp             CTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             cCCCchhhhhhcc-cCCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccc
Confidence            9999999988764 3467777888999999999999998   99999999999999999999999999998653

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-34  Score=210.02  Aligned_cols=144  Identities=32%  Similarity=0.465  Sum_probs=124.4

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccch--hhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKV--LDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +.+.+.||+|+||.||+|....  .+|+|.+...  .......+.+|+.++.+++||||+++++++ ..+..+++|||++
T Consensus        10 ~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~-~~~~~~lv~Ey~~   86 (276)
T d1uwha_          10 ITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCE   86 (276)
T ss_dssp             CCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCC
T ss_pred             EEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEE-eccEEEEEEecCC
Confidence            4566889999999999997543  5899988643  233456788999999999999999999976 4567899999999


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +|+|.+++......+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus        87 ~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~  155 (276)
T d1uwha_          87 GSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS  155 (276)
T ss_dssp             EEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC--
T ss_pred             CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeecc
Confidence            9999999976666788889999999999999999998   99999999999999999999999999998753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-33  Score=207.24  Aligned_cols=144  Identities=21%  Similarity=0.348  Sum_probs=125.0

Q ss_pred             hhc-ccCcCcCceEEEEEEc---CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           32 FKE-KVGRGSSGTVYKGAMI---NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        32 ~~~-~lg~g~~g~v~~~~~~---~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      +.+ +||+|+||.||+|.++   ++..||+|.+.+.. ......+.+|+.++.+++||||+++++++.+ +..++||||+
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~   90 (285)
T d1u59a_          12 IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMA   90 (285)
T ss_dssp             EEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred             ECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeC
Confidence            345 4999999999999764   34579999987543 3445678999999999999999999998864 5689999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++|+|.+++......+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus        91 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~  160 (285)
T d1u59a_          91 GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG  160 (285)
T ss_dssp             TTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             CCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhccc
Confidence            99999998866656788889999999999999999998   99999999999999999999999999998653

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-34  Score=208.69  Aligned_cols=151  Identities=17%  Similarity=0.260  Sum_probs=121.0

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEe--CCeEEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLE--VSKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~  103 (183)
                      .|.+.+.||+|+||.||+|... +++.+|+|.+....  ......+.+|+.+++.++||||+++++++.+  .+.++++|
T Consensus         5 dy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivm   84 (269)
T d2java1           5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM   84 (269)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEE
T ss_pred             hCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEE
Confidence            3667789999999999999976 57889999986542  3344568899999999999999999999865  45689999


Q ss_pred             eccCCCCHHHHHhc---CCCCCChHHHHHHHHHHHHHHHHhhhCC--CCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFN---AEKQPNWIERTGIARDIARGILYLHDEC--ETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ||+++|+|.+++..   ....+++..+..++.|++.||.|+|+..  ..+|+||||||+||+++.++.+||+|||+|+..
T Consensus        85 Ey~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~  164 (269)
T d2java1          85 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL  164 (269)
T ss_dssp             ECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC
T ss_pred             ecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeec
Confidence            99999999998854   2356788899999999999999999851  124999999999999999999999999999865


Q ss_pred             c
Q 048219          179 E  179 (183)
Q Consensus       179 ~  179 (183)
                      .
T Consensus       165 ~  165 (269)
T d2java1         165 N  165 (269)
T ss_dssp             -
T ss_pred             c
Confidence            3

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.9e-33  Score=210.36  Aligned_cols=147  Identities=23%  Similarity=0.321  Sum_probs=119.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh-HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .|.+.+.||+|+||.||+|... +++.+|+|.+.+... .....+.+|+.+++.++||||+++++++.+.+..+++|||+
T Consensus        10 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~   89 (307)
T d1a06a_          10 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV   89 (307)
T ss_dssp             TEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            3677889999999999999976 578899999875432 23356788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec---CCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD---ENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~---~~~~~~i~dfg~a~~~~  179 (183)
                      +|++|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+||++.   .++.+||+|||+|+...
T Consensus        90 ~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~  161 (307)
T d1a06a_          90 SGGELFDRIVEK-GFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED  161 (307)
T ss_dssp             CSCBHHHHHHTC-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC-------
T ss_pred             CCCcHHHhhhcc-cCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEcc
Confidence            999999999653 4578888889999999999999998   999999999999995   46889999999998653

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=4.5e-33  Score=205.54  Aligned_cols=147  Identities=25%  Similarity=0.276  Sum_probs=129.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---------hHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---------DEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVS   97 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---------~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~   97 (183)
                      .|.+.+.||+|+||.||+|+.. +++.+|+|.+.+..         ......+.+|+.++.+++ ||||+++++++.+.+
T Consensus         4 ~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~   83 (277)
T d1phka_           4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT   83 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             cCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCc
Confidence            3567789999999999999975 57899999986431         112346789999999997 999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccc
Q 048219           98 KKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKV  177 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~  177 (183)
                      ..+++|||+++++|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+.
T Consensus        84 ~~~ivmE~~~~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~  159 (277)
T d1phka_          84 FFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQ  159 (277)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             ceEEEEEcCCCchHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchheeE
Confidence            999999999999999999764 3578888999999999999999998   999999999999999999999999999986


Q ss_pred             cc
Q 048219          178 DE  179 (183)
Q Consensus       178 ~~  179 (183)
                      ..
T Consensus       160 ~~  161 (277)
T d1phka_         160 LD  161 (277)
T ss_dssp             CC
T ss_pred             cc
Confidence            53

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-33  Score=206.45  Aligned_cols=145  Identities=28%  Similarity=0.467  Sum_probs=124.6

Q ss_pred             chhcccCcCcCceEEEEEEcCC-----cEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           31 GFKEKVGRGSSGTVYKGAMINR-----QLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~~~-----~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .+.+.||+|+||.||+|.....     ..||+|.+.... ......+.+|+.++..++||||+++++++...+..+++||
T Consensus        10 ~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e   89 (283)
T d1mqba_          10 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITE   89 (283)
T ss_dssp             EEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             EeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEE
Confidence            4557899999999999986542     468999986543 3334568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++.++++.+.+......+++..+..++.|++.|+.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus        90 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~  160 (283)
T d1mqba_          90 YMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL  160 (283)
T ss_dssp             CCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             ecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhcc
Confidence            9999999998877667788888899999999999999998   9999999999999999999999999999865

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.2e-33  Score=207.97  Aligned_cols=146  Identities=23%  Similarity=0.281  Sum_probs=128.2

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      |.+.+.||+|+||.||+|... +++.+|+|.+.+...   .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         6 y~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~   85 (316)
T d1fota_           6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY   85 (316)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeee
Confidence            567789999999999999975 588999999875432   2245688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++|+++...+.... ...+.....++.|++.||.|+|++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus        86 ~~gg~l~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~  155 (316)
T d1fota_          86 IEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP  155 (316)
T ss_dssp             CCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred             cCCccccccccccc-cccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEec
Confidence            99999999886643 456667777899999999999998   99999999999999999999999999998653

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-33  Score=209.24  Aligned_cols=149  Identities=21%  Similarity=0.331  Sum_probs=124.8

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC-C-----cEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN-R-----QLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~-~-----~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   99 (183)
                      ..+.+.+.||+|+||.||+|.... +     ..|++|.+.... ......+.+|+.++..+ +||||+++++++.+.+..
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~  116 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI  116 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence            346677899999999999998653 2     358888875432 23345688899999988 899999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCC----------------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCC
Q 048219          100 ILVYEYMSNGSLADILFNAE----------------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQ  157 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~----------------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~  157 (183)
                      ++||||+++|+|.+++....                      ..+++..+..++.|++.||.|||++   +|+||||||+
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlKp~  193 (325)
T d1rjba_         117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAAR  193 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGG
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCchh
Confidence            99999999999999996542                      2367778888999999999999998   9999999999


Q ss_pred             CEEecCCCcccccceecccccc
Q 048219          158 NILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       158 nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ||+++.++.+||+|||+|+...
T Consensus       194 Nill~~~~~~Kl~DFGla~~~~  215 (325)
T d1rjba_         194 NVLVTHGKVVKICDFGLARDIM  215 (325)
T ss_dssp             GEEEETTTEEEECCCGGGSCGG
T ss_pred             ccccccCCeEEEeecccccccc
Confidence            9999999999999999998654

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-33  Score=205.74  Aligned_cols=147  Identities=23%  Similarity=0.308  Sum_probs=128.8

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh------HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD------EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      .|.+.+.||+|+||.||+|... ++..+|+|.+.+...      .....+.+|+.+++.++||||+++++++.+.+..++
T Consensus        11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   90 (293)
T d1jksa_          11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL   90 (293)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            4677889999999999999975 578999999864321      124578899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC----cccccceecccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR----CAKNFRLWIGKV  177 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~----~~~i~dfg~a~~  177 (183)
                      ||||+++|+|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++    .+|++|||+|+.
T Consensus        91 v~E~~~gg~L~~~i~~~-~~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~  166 (293)
T d1jksa_          91 ILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  166 (293)
T ss_dssp             EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEcCCCccccchhccc-cccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchhhhhh
Confidence            99999999999998654 3577888888999999999999998   999999999999998776    499999999986


Q ss_pred             cc
Q 048219          178 DE  179 (183)
Q Consensus       178 ~~  179 (183)
                      ..
T Consensus       167 ~~  168 (293)
T d1jksa_         167 ID  168 (293)
T ss_dssp             CT
T ss_pred             cC
Confidence            53

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-32  Score=202.39  Aligned_cols=141  Identities=23%  Similarity=0.328  Sum_probs=120.8

Q ss_pred             cccCcCcCceEEEEEEcC---CcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           34 EKVGRGSSGTVYKGAMIN---RQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~---~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      ++||+|+||.||+|....   ++.||+|.+....  ......+.+|+.++++++||||+++++++.+ +..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            369999999999998643   4679999986432  2334678999999999999999999999864 457899999999


Q ss_pred             CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          109 GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       109 ~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |+|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+|++|||+|+...
T Consensus        92 g~L~~~l~~~-~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~  158 (277)
T d1xbba_          92 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR  158 (277)
T ss_dssp             EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             CcHHHHHhhc-cCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhcc
Confidence            9999988654 4577888899999999999999998   99999999999999999999999999998653

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-33  Score=206.12  Aligned_cols=145  Identities=28%  Similarity=0.380  Sum_probs=126.8

Q ss_pred             HhchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccCC
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSN  108 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (183)
                      .+.+.+.||+|+||.||+|...++..||+|.+.... .....+.+|+.++++++|+||+++++++. .+..++||||+++
T Consensus        18 ~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~~   95 (285)
T d1fmka3          18 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSK   95 (285)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCTT
T ss_pred             HEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecCC
Confidence            577888999999999999999888889999986543 23457899999999999999999999884 5668999999999


Q ss_pred             CCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          109 GSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       109 ~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++..++.... ..+++..+..++.|++.||.|||++   +++||||||+||+++.++.+||+|||+|+..
T Consensus        96 g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~  163 (285)
T d1fmka3          96 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLI  163 (285)
T ss_dssp             CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--
T ss_pred             CchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhc
Confidence            99998875432 4578889999999999999999998   9999999999999999999999999999865

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.3e-32  Score=205.20  Aligned_cols=147  Identities=22%  Similarity=0.291  Sum_probs=123.6

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      |.+.+.||+|+||.||+|... +++.||+|.+.....  .....+.+|+.+++.++||||+++++++.+.+..+++||++
T Consensus         4 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~   83 (298)
T d1gz8a_           4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL   83 (298)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             CEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeec
Confidence            556689999999999999975 578999999864322  12356889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      .++.+..........+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+|++|||+|+...
T Consensus        84 ~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~  153 (298)
T d1gz8a_          84 HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG  153 (298)
T ss_dssp             SEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred             CCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceecc
Confidence            76444433334445678889999999999999999998   99999999999999999999999999998653

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=4.4e-32  Score=206.20  Aligned_cols=147  Identities=21%  Similarity=0.178  Sum_probs=129.6

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||+|... ++..+|+|.+.+...   .....+.+|+.+++.++||||+++++++.+....+++||
T Consensus        42 ~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e  121 (350)
T d1rdqe_          42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME  121 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccc
Confidence            3566679999999999999976 588999999865322   123568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++.++++.+.+... ..+++..+..++.|++.||.|||++   +|+||||||+|||++.++.+||+|||+|+...
T Consensus       122 ~~~~g~l~~~l~~~-~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~  192 (350)
T d1rdqe_         122 YVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK  192 (350)
T ss_dssp             CCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             cccccchhhhHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeecc
Confidence            99999999988654 3577888888999999999999998   99999999999999999999999999998654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=3.4e-32  Score=200.53  Aligned_cols=147  Identities=20%  Similarity=0.313  Sum_probs=121.5

Q ss_pred             HhchhcccCcCcCceEEEEEEcC----CcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~~----~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      .+.+.+.||+|+||.||+|....    +..+++|.+.... ......+.+|+.+++.++||||+++++++. .+..++||
T Consensus         8 ~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~   86 (273)
T d1mp8a_           8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIM   86 (273)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             HeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEE
Confidence            46777899999999999998653    3468888886543 333467899999999999999999999884 56789999


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ||++++++.+++......+++..+..++.|++.||.|+|++   +++||||||+||+++.++.+||+|||+|+...
T Consensus        87 E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~  159 (273)
T d1mp8a_          87 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME  159 (273)
T ss_dssp             ECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             EeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheecc
Confidence            99999999998877666788888999999999999999998   99999999999999999999999999998654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-31  Score=200.82  Aligned_cols=144  Identities=26%  Similarity=0.473  Sum_probs=125.6

Q ss_pred             hhcccCcCcCceEEEEEEcCC----cEEEEEEccch-hhHHHHHHHHHHHHHhhcCCCceeeeeceEEe-CCeEEEEEec
Q 048219           32 FKEKVGRGSSGTVYKGAMINR----QLVAVNRLEKV-LDEREREFQTEIKVIGRTHHRNLVRLLGYSLE-VSKKILVYEY  105 (183)
Q Consensus        32 ~~~~lg~g~~g~v~~~~~~~~----~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~  105 (183)
                      +.+.||+|+||.||+|.....    ..+|+|.+.+. ......++.+|++++.+++||||+++++++.. ++..++||||
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~  110 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY  110 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred             cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEE
Confidence            456899999999999986532    35889988643 34455789999999999999999999999875 5688999999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      ++++++.+++........+..+..++.|++.||.|+|+.   +|+||||||+||++++++.+||+|||+|+..
T Consensus       111 ~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~  180 (311)
T d1r0pa_         111 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM  180 (311)
T ss_dssp             CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCT
T ss_pred             eecCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhc
Confidence            999999999877666677888888999999999999998   9999999999999999999999999999864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=9.1e-32  Score=205.45  Aligned_cols=146  Identities=20%  Similarity=0.173  Sum_probs=124.2

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHH---HHHHH---HHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDER---EREFQ---TEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~---~~~~~---~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      |.+.+.||+|+||.||+|... +++.+|+|.+.+.....   ...+.   .++.+++.+.||||+++++++.+.+..++|
T Consensus         6 y~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~iv   85 (364)
T d1omwa3           6 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI   85 (364)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred             CeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEE
Confidence            566789999999999999976 58899999986532211   12233   346777888999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |||+++++|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+|||++.++.+||+|||+|+...
T Consensus        86 mE~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~  158 (364)
T d1omwa3          86 LDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS  158 (364)
T ss_dssp             ECCCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEECS
T ss_pred             EEecCCCcHHHHHHhc-ccccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeecC
Confidence            9999999999998654 3466778888999999999999998   99999999999999999999999999998653

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-31  Score=200.83  Aligned_cols=146  Identities=23%  Similarity=0.271  Sum_probs=125.5

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhh---HHHHHHHHHHHHH-hhcCCCceeeeeceEEeCCeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLD---EREREFQTEIKVI-GRTHHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      |.+.+.||+|+||.||+|... +++.+|+|.+.+...   .....+..|..++ +.++||||+++++++.+.+..|+|||
T Consensus         4 y~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmE   83 (320)
T d1xjda_           4 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME   83 (320)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEe
Confidence            567789999999999999976 588899999975421   1234556666665 46899999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |+++|+|.+++... ..+++..+..++.|++.||.|||++   +++||||||+||+++.++.+|++|||+|+...
T Consensus        84 y~~~g~L~~~i~~~-~~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~  154 (320)
T d1xjda_          84 YLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENM  154 (320)
T ss_dssp             CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             ecCCCcHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhcc
Confidence            99999999998654 3467778888999999999999998   99999999999999999999999999998654

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=5.7e-32  Score=200.50  Aligned_cols=146  Identities=22%  Similarity=0.300  Sum_probs=127.2

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchhh--HHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLD--EREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      |.+.+.||+|+||.||+|.+.+++.||+|.+.....  .....+.+|+.+++.++||||+++++++...+..++++|++.
T Consensus         4 Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~   83 (286)
T d1ob3a_           4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD   83 (286)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             ceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeeh
Confidence            566789999999999999998899999999865322  123578899999999999999999999999999999999997


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++.+.... .....+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+|++|||.|....
T Consensus        84 ~~~~~~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~  151 (286)
T d1ob3a_          84 QDLKKLLD-VCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG  151 (286)
T ss_dssp             EEHHHHHH-TSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred             hhhHHHHH-hhcCCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceecc
Confidence            65555544 4456688889999999999999999998   99999999999999999999999999998654

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1e-31  Score=200.25  Aligned_cols=142  Identities=27%  Similarity=0.323  Sum_probs=119.3

Q ss_pred             cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHH-----HHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEeccC
Q 048219           34 EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDER-----EREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS  107 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (183)
                      +.||+|+||.||+|.+. +++.+|+|.+.......     ...+.+|+.+++.++||||+++++++...+..++||||+.
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~   83 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   83 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhc
Confidence            57999999999999975 58899999986532211     2357899999999999999999999999999999999998


Q ss_pred             CCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       108 ~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++.... .....+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus        84 ~~~~~~~~-~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~  151 (299)
T d1ua2a_          84 TDLEVIIK-DNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFG  151 (299)
T ss_dssp             EEHHHHHT-TCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             chHHhhhh-hcccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccC
Confidence            76655544 3345577778888999999999999998   99999999999999999999999999998653

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.9e-32  Score=197.99  Aligned_cols=146  Identities=28%  Similarity=0.318  Sum_probs=119.1

Q ss_pred             hchhcccCcCcCceEEEEEEcC--C--cEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN--R--QLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~--~--~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (183)
                      +.+.+.||+|+||.||+|....  +  ..||+|.+.+..   ....+.+.+|+.+++.++||||+++++++.+ +..+++
T Consensus        10 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv   88 (273)
T d1u46a_          10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMV   88 (273)
T ss_dssp             EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             eEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchhee
Confidence            5677899999999999998542  2  368899886532   2334678999999999999999999999965 467899


Q ss_pred             EeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          103 YEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |||++++++.+.+......+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+|++|||+|+...
T Consensus        89 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~  162 (273)
T d1u46a_          89 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP  162 (273)
T ss_dssp             EECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             eeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhcc
Confidence            999999999988876556688888899999999999999998   99999999999999999999999999999653

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.1e-31  Score=199.51  Aligned_cols=148  Identities=30%  Similarity=0.455  Sum_probs=125.2

Q ss_pred             hchhcccCcCcCceEEEEEEcC-Cc--EEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCeEEEEEe
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQ--LVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYE  104 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~--~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e  104 (183)
                      +.+.+.||+|+||.||+|.... +.  .+++|.+.... ......+.+|+.++..+ +||||+++++++.+.+..++|||
T Consensus        12 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~e   91 (309)
T d1fvra_          12 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE   91 (309)
T ss_dssp             CEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEE
Confidence            4567899999999999998654 33  47788875432 33445789999999998 69999999999999999999999


Q ss_pred             ccCCCCHHHHHhcC---------------CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccc
Q 048219          105 YMSNGSLADILFNA---------------EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKN  169 (183)
Q Consensus       105 ~~~~~~l~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i  169 (183)
                      |+++|+|.+++...               ...+++..+..++.|++.|+.|+|++   +++||||||+||+++.++.+||
T Consensus        92 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~~~kl  168 (309)
T d1fvra_          92 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKI  168 (309)
T ss_dssp             CCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEE
T ss_pred             ecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCCceEE
Confidence            99999999998543               24578888899999999999999998   9999999999999999999999


Q ss_pred             cceeccccccc
Q 048219          170 FRLWIGKVDEA  180 (183)
Q Consensus       170 ~dfg~a~~~~~  180 (183)
                      +|||+|+....
T Consensus       169 ~DfG~a~~~~~  179 (309)
T d1fvra_         169 ADFGLSRGQEV  179 (309)
T ss_dssp             CCTTCEESSCE
T ss_pred             ccccccccccc
Confidence            99999986543

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-31  Score=200.20  Aligned_cols=145  Identities=26%  Similarity=0.354  Sum_probs=123.6

Q ss_pred             hchhcccCcCcCceEEEEEEcC-Cc----EEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMIN-RQ----LVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVY  103 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~-~~----~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (183)
                      +.+.+.||+|+||.||+|.... ++    .|++|.+.... ....+.+.+|+.+++.++||||+++++++.+. ..++++
T Consensus        11 y~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~   89 (317)
T d1xkka_          11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIT   89 (317)
T ss_dssp             EEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEE
T ss_pred             CEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEE
Confidence            5667899999999999998653 32    57888876432 22346789999999999999999999998764 567888


Q ss_pred             eccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          104 EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       104 e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      |++.++++.+.+......+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+..
T Consensus        90 e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~  161 (317)
T d1xkka_          90 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL  161 (317)
T ss_dssp             ECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHT
T ss_pred             EeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceec
Confidence            99999999998887777788888899999999999999998   9999999999999999999999999999865

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=2.5e-31  Score=198.35  Aligned_cols=147  Identities=26%  Similarity=0.416  Sum_probs=127.2

Q ss_pred             HhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (183)
                      .+.+.+.||+|+||.||+|+..      ++..||+|.+.... ......+.+|+.+++.++|||++++++++...+..++
T Consensus        14 ~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~   93 (301)
T d1lufa_          14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL   93 (301)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEE
Confidence            3566789999999999999864      24679999987543 3345678999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCC-----------------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCC
Q 048219          102 VYEYMSNGSLADILFNAE-----------------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQN  158 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~n  158 (183)
                      +||++++++|.+++....                       ..+++..+..++.|++.||.|+|+.   +++||||||+|
T Consensus        94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivHrDlKp~N  170 (301)
T d1lufa_          94 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRN  170 (301)
T ss_dssp             EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             EEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEeeEEcccc
Confidence            999999999999886421                       2356777888999999999999998   99999999999


Q ss_pred             EEecCCCcccccceeccccc
Q 048219          159 ILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       159 il~~~~~~~~i~dfg~a~~~  178 (183)
                      |+++.++.+||+|||+|+..
T Consensus       171 ILld~~~~~Kl~DFGls~~~  190 (301)
T d1lufa_         171 CLVGENMVVKIADFGLSRNI  190 (301)
T ss_dssp             EEECGGGCEEECCCSCHHHH
T ss_pred             eEECCCCcEEEccchhheec
Confidence            99999999999999999744

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.7e-31  Score=198.78  Aligned_cols=149  Identities=23%  Similarity=0.343  Sum_probs=127.5

Q ss_pred             HHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEE
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (183)
                      ..+.+.+.||+|+||.||+|...      .+..||+|++.... ......+.+|+.++.+++||||+++++++...+..+
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            44567789999999999999854      24679999987543 333456889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcC---------CCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccc
Q 048219          101 LVYEYMSNGSLADILFNA---------EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFR  171 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~---------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~d  171 (183)
                      ++||++++|++.+++...         ...+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl~D  176 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD  176 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECC
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEEee
Confidence            999999999999987532         13356777888999999999999998   999999999999999999999999


Q ss_pred             eecccccc
Q 048219          172 LWIGKVDE  179 (183)
Q Consensus       172 fg~a~~~~  179 (183)
                      ||+|+...
T Consensus       177 FGla~~~~  184 (308)
T d1p4oa_         177 FGMTRDIY  184 (308)
T ss_dssp             TTCCCGGG
T ss_pred             cccceecc
Confidence            99998653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-31  Score=199.24  Aligned_cols=152  Identities=22%  Similarity=0.323  Sum_probs=117.2

Q ss_pred             HHHHHhchhcccCcCcCceEEEEEEcC------CcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeC
Q 048219           25 LKKITDGFKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEV   96 (183)
Q Consensus        25 ~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   96 (183)
                      +....+.+.+.||+|+||.||+|....      ++.||+|.+.... ......+..|...+.++ .|+||+.+++++...
T Consensus        10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~   89 (299)
T d1ywna1          10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP   89 (299)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             ccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence            444567788899999999999998542      3679999986533 33345677788877776 588999999887654


Q ss_pred             -CeEEEEEeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEE
Q 048219           97 -SKKILVYEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNIL  160 (183)
Q Consensus        97 -~~~~lv~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil  160 (183)
                       ...+++|||+++|+|.+++....               ..+++..+..++.|++.||.|||++   +|+||||||+||+
T Consensus        90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NIL  166 (299)
T d1ywna1          90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL  166 (299)
T ss_dssp             TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCcccee
Confidence             46899999999999999986432               2367788888999999999999998   9999999999999


Q ss_pred             ecCCCcccccceecccccc
Q 048219          161 MDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       161 ~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++.++.+||+|||+|+...
T Consensus       167 l~~~~~~Kl~DFGla~~~~  185 (299)
T d1ywna1         167 LSEKNVVKICDFGLARDIY  185 (299)
T ss_dssp             ECGGGCEEECC------CC
T ss_pred             ECCCCcEEEccCcchhhcc
Confidence            9999999999999998643

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=8.8e-31  Score=193.27  Aligned_cols=146  Identities=21%  Similarity=0.251  Sum_probs=127.0

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh---hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC----eEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS----KKI  100 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~  100 (183)
                      +|.+.+.||+|+||.||+|.+. +++.+|+|.+.+..   ......+.+|+.+++.++||||+++++++...+    ..|
T Consensus         8 rY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~   87 (277)
T d1o6ya_           8 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY   87 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             eeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEE
Confidence            3677889999999999999975 58899999986532   333457889999999999999999999997654    378


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +||||+++++|.+.+... ..+++..+..++.|++.||.|+|++   +|+||||||+||+++.++..+++|||.++..
T Consensus        88 lvmE~~~g~~L~~~~~~~-~~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~  161 (277)
T d1o6ya_          88 IVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI  161 (277)
T ss_dssp             EEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred             EEEECCCCCEehhhhccc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhhh
Confidence            999999999999888654 3577888889999999999999998   9999999999999999999999999998754

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.1e-31  Score=195.04  Aligned_cols=144  Identities=27%  Similarity=0.364  Sum_probs=120.0

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEe-CCeEEEEEeccCC
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE-VSKKILVYEYMSN  108 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~  108 (183)
                      +.+.+.||+|+||.||+|... +..||+|.+++..  ..+.+.+|+.++++++||||+++++++.+ .+..++||||+++
T Consensus         9 ~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~   85 (262)
T d1byga_           9 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK   85 (262)
T ss_dssp             EEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTT
T ss_pred             eEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCC
Confidence            346678999999999999875 5679999997642  34568899999999999999999999864 5678999999999


Q ss_pred             CCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          109 GSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       109 ~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      |+|.+++.... ..+++..+..++.|++.||.|||+.   +++||||+|+||+++.++.+|++|||+++...
T Consensus        86 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~  154 (262)
T d1byga_          86 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  154 (262)
T ss_dssp             EEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecC
Confidence            99999986532 3467888889999999999999998   99999999999999999999999999999754

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-30  Score=194.79  Aligned_cols=150  Identities=23%  Similarity=0.337  Sum_probs=129.3

Q ss_pred             HHHhchhcccCcCcCceEEEEEEc------CCcEEEEEEccchh-hHHHHHHHHHHHHHhhc-CCCceeeeeceEEeCCe
Q 048219           27 KITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRLEKVL-DEREREFQTEIKVIGRT-HHRNLVRLLGYSLEVSK   98 (183)
Q Consensus        27 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   98 (183)
                      ...+.+.+.||+|+||.||+|...      .+..+|+|++.... ......+.+|+.++..+ +||||+++++++.+...
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            345677889999999999999853      35689999987543 33455788999999998 69999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCC-----------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEe
Q 048219           99 KILVYEYMSNGSLADILFNAE-----------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM  161 (183)
Q Consensus        99 ~~lv~e~~~~~~l~~~l~~~~-----------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~  161 (183)
                      .+++|||++++++.+++....                 ..+++..+..++.|++.|+.|||++   +++||||||+||++
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl~  178 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL  178 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeecccccccccc
Confidence            999999999999999986432                 2467788888999999999999998   99999999999999


Q ss_pred             cCCCcccccceecccccc
Q 048219          162 DENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       162 ~~~~~~~i~dfg~a~~~~  179 (183)
                      +.++.++++|||+|+...
T Consensus       179 ~~~~~~ki~DfG~~~~~~  196 (311)
T d1t46a_         179 THGRITKICDFGLARDIK  196 (311)
T ss_dssp             ETTTEEEECCCGGGSCTT
T ss_pred             cccCcccccccchheecc
Confidence            999999999999999654

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-30  Score=197.51  Aligned_cols=142  Identities=22%  Similarity=0.281  Sum_probs=119.6

Q ss_pred             hchh-cccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhh-cCCCceeeeeceEEe----CCeEEEE
Q 048219           30 DGFK-EKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRLLGYSLE----VSKKILV  102 (183)
Q Consensus        30 ~~~~-~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~----~~~~~lv  102 (183)
                      |.+. +.||+|+||.||+|... +++.||+|.+.+.     ..+.+|+.++.+ .+||||++++++|.+    ...+|++
T Consensus        13 y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~iv   87 (335)
T d2ozaa1          13 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV   87 (335)
T ss_dssp             EEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEE
Confidence            4554 46999999999999975 5789999998653     245678888655 479999999999875    3568999


Q ss_pred             EeccCCCCHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC---CCcccccceeccccc
Q 048219          103 YEYMSNGSLADILFNAE-KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE---NRCAKNFRLWIGKVD  178 (183)
Q Consensus       103 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~---~~~~~i~dfg~a~~~  178 (183)
                      ||||+||+|.+++.... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.   .+.+||+|||+|+..
T Consensus        88 mEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~  164 (335)
T d2ozaa1          88 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  164 (335)
T ss_dssp             EECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             EECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccccceeeec
Confidence            99999999999997643 4578888899999999999999998   9999999999999986   457999999999865


Q ss_pred             c
Q 048219          179 E  179 (183)
Q Consensus       179 ~  179 (183)
                      .
T Consensus       165 ~  165 (335)
T d2ozaa1         165 T  165 (335)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.9e-30  Score=192.72  Aligned_cols=146  Identities=25%  Similarity=0.275  Sum_probs=118.5

Q ss_pred             hchhcccCcCcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC----eEEEEEec
Q 048219           30 DGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS----KKILVYEY  105 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~  105 (183)
                      +-+.+.||+|+||.||+|+. ++..||+|.+...... ......|+..+..++||||+++++++.+.+    ..++||||
T Consensus         5 ~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~-~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey   82 (303)
T d1vjya_           5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             EEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-HHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEec
Confidence            44567899999999999985 5778999998654221 112223555556789999999999997654    57899999


Q ss_pred             cCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCC-----CCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          106 MSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC-----ETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       106 ~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-----~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++++|.+++...  .+++..+..++.|++.|+.|+|+..     ..+|+||||||+||+++.++.+||+|||+|+...
T Consensus        83 ~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~  159 (303)
T d1vjya_          83 HEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  159 (303)
T ss_dssp             CTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred             ccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcccccc
Confidence            9999999999763  5778888889999999999999621     1389999999999999999999999999998653

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.2e-31  Score=195.13  Aligned_cols=149  Identities=23%  Similarity=0.328  Sum_probs=123.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEcC--------CcEEEEEEccchhh-HHHHHHHHHHHHHhhc-CCCceeeeeceEEeCC
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMIN--------RQLVAVNRLEKVLD-EREREFQTEIKVIGRT-HHRNLVRLLGYSLEVS   97 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~~--------~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   97 (183)
                      ..+.+.+.||+|+||.||+|+...        +..||+|.+.+... .....+.+|...+.++ +||||+++++++.+.+
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~   92 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   92 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence            356677899999999999998543        24689999876543 3346788888888887 7999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCC---------------CCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEec
Q 048219           98 KKILVYEYMSNGSLADILFNAE---------------KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD  162 (183)
Q Consensus        98 ~~~lv~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~  162 (183)
                      ..+++|||+++|++.+++....               ..+++..+..++.|++.||.|+|++   +++||||||+||+++
T Consensus        93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiLl~  169 (299)
T d1fgka_          93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT  169 (299)
T ss_dssp             SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred             eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeecccceeec
Confidence            9999999999999999996542               3468888899999999999999998   999999999999999


Q ss_pred             CCCcccccceecccccc
Q 048219          163 ENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       163 ~~~~~~i~dfg~a~~~~  179 (183)
                      .++.+||+|||+++...
T Consensus       170 ~~~~~kl~dfg~~~~~~  186 (299)
T d1fgka_         170 EDNVMKIADFGLARDIH  186 (299)
T ss_dssp             TTCCEEECSTTCCCCGG
T ss_pred             CCCCeEeccchhhcccc
Confidence            99999999999999664

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4e-30  Score=195.16  Aligned_cols=145  Identities=21%  Similarity=0.270  Sum_probs=119.9

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh-hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC-----eEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL-DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS-----KKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l  101 (183)
                      +|.+.+.||+|+||.||+|... ++..+|+|.+.+.. ......+.+|+.+|+.++|||++++++++....     ..++
T Consensus         9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l   88 (345)
T d1pmea_           9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL   88 (345)
T ss_dssp             TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEE
Confidence            3667789999999999999875 68899999987543 334567889999999999999999999987543     2445


Q ss_pred             EEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          102 VYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       102 v~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      + +++.+++|.+++...  .+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+|+...
T Consensus        89 ~-~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~  160 (345)
T d1pmea_          89 V-THLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD  160 (345)
T ss_dssp             E-EECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             E-EeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceeecc
Confidence            4 556689999998653  578888899999999999999998   99999999999999999999999999998653

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.2e-30  Score=190.66  Aligned_cols=146  Identities=23%  Similarity=0.274  Sum_probs=127.5

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCCeEEEEEecc
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      |.+.+.||+|+||.||+|.+. +++.||+|.+....  ......+.+|+.+++.++|+||+++.+++.+....+++++++
T Consensus         4 y~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~   83 (292)
T d1unla_           4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeec
Confidence            567789999999999999976 57889999985432  234567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      .++++..++.. .....+..+..++.|++.||.|||++   +|+||||||+||+++.++.+|++|||.|+...
T Consensus        84 ~~~~l~~~~~~-~~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~  152 (292)
T d1unla_          84 DQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFG  152 (292)
T ss_dssp             SEEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             ccccccccccc-ccccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhccc
Confidence            98888776654 44567788888999999999999998   99999999999999999999999999998654

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.96  E-value=4.3e-30  Score=193.69  Aligned_cols=141  Identities=21%  Similarity=0.341  Sum_probs=121.4

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEEeC--CeEEEEEe
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSLEV--SKKILVYE  104 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~--~~~~lv~e  104 (183)
                      .|.+.+.||+|+||.||+|+.. +++.||+|.+++..   ..++.+|+.+|..++ ||||+++++++...  ...+++||
T Consensus        36 ~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e  112 (328)
T d3bqca1          36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  112 (328)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEE
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEe
Confidence            4677789999999999999975 58889999987542   346788999999995 99999999999754  56899999


Q ss_pred             ccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC-cccccceecccccc
Q 048219          105 YMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR-CAKNFRLWIGKVDE  179 (183)
Q Consensus       105 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~-~~~i~dfg~a~~~~  179 (183)
                      +++++++....    +.+++..+..++.|++.||.|||++   +|+||||||+|||++.++ .++++|||+|+...
T Consensus       113 ~~~~~~L~~~~----~~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~  181 (328)
T d3bqca1         113 HVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH  181 (328)
T ss_dssp             CCCSCBGGGTT----TSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEECC
T ss_pred             ecCCCcHHHHh----cCCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccceecc
Confidence            99999987653    3577888889999999999999998   999999999999998654 68999999998654

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.8e-31  Score=193.50  Aligned_cols=147  Identities=20%  Similarity=0.247  Sum_probs=123.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhH------HHHHHHHHHHHHhhcC--CCceeeeeceEEeCCeE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDE------REREFQTEIKVIGRTH--HRNLVRLLGYSLEVSKK   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~------~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~   99 (183)
                      .|.+.+.||+|+||.||+|... ++..+|+|.+.+....      ...++.+|+.+++.++  ||||+++++++.+.+..
T Consensus         5 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~   84 (273)
T d1xwsa_           5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF   84 (273)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEE
T ss_pred             eEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeE
Confidence            4677889999999999999976 5789999998653211      1223567999999886  89999999999999999


Q ss_pred             EEEEeccCC-CCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCC-Ccccccceecccc
Q 048219          100 ILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN-RCAKNFRLWIGKV  177 (183)
Q Consensus       100 ~lv~e~~~~-~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~-~~~~i~dfg~a~~  177 (183)
                      +++||++.+ +++.+.+... ..+++..+..++.|++.||.|||++   +|+||||||+||+++.+ +.+||+|||+|+.
T Consensus        85 ~lv~e~~~~~~~l~~~~~~~-~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~  160 (273)
T d1xwsa_          85 VLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGAL  160 (273)
T ss_dssp             EEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEEeccCcchHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECcccccee
Confidence            999999975 5777777543 4577888888999999999999998   99999999999999865 7899999999986


Q ss_pred             cc
Q 048219          178 DE  179 (183)
Q Consensus       178 ~~  179 (183)
                      ..
T Consensus       161 ~~  162 (273)
T d1xwsa_         161 LK  162 (273)
T ss_dssp             CC
T ss_pred             cc
Confidence            53

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-29  Score=192.69  Aligned_cols=145  Identities=20%  Similarity=0.290  Sum_probs=118.9

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeCC------eE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVS------KK   99 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~   99 (183)
                      +|.+.+.||+|+||.||+|.+. +++.||+|.+.+..  ......+.+|+.+|+.++|||+++++++|...+      .+
T Consensus        19 ~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~   98 (346)
T d1cm8a_          19 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF   98 (346)
T ss_dssp             SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred             cEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceE
Confidence            4667788999999999999976 58889999987532  234567889999999999999999999997654      46


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       100 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      +++||++ +.++......  ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+|++|||+|+...
T Consensus        99 ~lv~e~~-~~~l~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~  172 (346)
T d1cm8a_          99 YLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQAD  172 (346)
T ss_dssp             EEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEecc-cccHHHHHHh--ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccceeccC
Confidence            9999999 5678777654  3578888899999999999999998   99999999999999999999999999998654

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.9e-30  Score=193.33  Aligned_cols=143  Identities=25%  Similarity=0.304  Sum_probs=116.3

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceeeeeceEEeC------CeEEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEV------SKKIL  101 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~l  101 (183)
                      .|...+.||+|+||.||+|.+. +++.||+|.+.+..    ....+|+.+|+.++|+||++++++|...      .++++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc----hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            3556678999999999999986 58899999986532    1234699999999999999999998542      34789


Q ss_pred             EEeccCCCCHHHHHh--cCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC-cccccceeccccc
Q 048219          102 VYEYMSNGSLADILF--NAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR-CAKNFRLWIGKVD  178 (183)
Q Consensus       102 v~e~~~~~~l~~~l~--~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~-~~~i~dfg~a~~~  178 (183)
                      +|||++++....+..  .....+++..+..++.|++.||.|||++   +|+||||||+|||++.++ .+||+|||+|+..
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchhhc
Confidence            999997653333322  2345678888888999999999999998   999999999999999775 8999999999865

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.9e-30  Score=191.78  Aligned_cols=146  Identities=25%  Similarity=0.217  Sum_probs=125.7

Q ss_pred             hchhcccCcCcCceEEEEEEc----CCcEEEEEEccchh----hHHHHHHHHHHHHHhhcCC-CceeeeeceEEeCCeEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVL----DEREREFQTEIKVIGRTHH-RNLVRLLGYSLEVSKKI  100 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~----~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~  100 (183)
                      |.+.+.||+|+||.||+|...    +++.+|+|.+.+..    ......+.+|+.++++++| |||+++++++.+....+
T Consensus        26 y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~  105 (322)
T d1vzoa_          26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH  105 (322)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred             eEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCcee
Confidence            777889999999999999853    36789999986432    1123457789999999976 79999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++||++.+++|.+.+.... ...+.....++.|++.|+.|+|++   +++||||||+||+++.++.+||+|||+|+...
T Consensus       106 ~v~e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~  180 (322)
T d1vzoa_         106 LILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  180 (322)
T ss_dssp             EEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             eeeecccccHHHHHHHhcc-cccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccchhhhc
Confidence            9999999999999986644 345677778899999999999998   99999999999999999999999999998653

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.3e-29  Score=188.61  Aligned_cols=146  Identities=21%  Similarity=0.285  Sum_probs=120.5

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEeC-----CeEE
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLEV-----SKKI  100 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~  100 (183)
                      +|.+.+.||+|+||.||+|.+. +++.||+|.+.+..  ......+.+|+.+|+.++|+|++++++++...     ...+
T Consensus        19 rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~   98 (348)
T d2gfsa1          19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV   98 (348)
T ss_dssp             TEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCC
T ss_pred             CeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceE
Confidence            4777789999999999999975 58899999987542  23445788999999999999999999998643     2345


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++++++.+++|.+++..  ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+|++|||+|....
T Consensus        99 ~i~~~~~gg~L~~~~~~--~~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~  172 (348)
T d2gfsa1          99 YLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTD  172 (348)
T ss_dssp             EEEEECCSEEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----CCT
T ss_pred             EEEEeecCCchhhhccc--ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhcccC
Confidence            66677789999998844  4578888899999999999999998   99999999999999999999999999998654

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.2e-29  Score=186.19  Aligned_cols=148  Identities=21%  Similarity=0.288  Sum_probs=120.2

Q ss_pred             HHhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEe--------C
Q 048219           28 ITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLE--------V   96 (183)
Q Consensus        28 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------~   96 (183)
                      .+|.+.+.||+|+||.||+|.+. +++.||+|++....  ......+.+|+.+|+.++|+|++++.+++..        .
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            35677889999999999999975 68899999875432  1223567899999999999999999988754        3


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219           97 SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus        97 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      +..+++||++.++.+. .............+..++.|++.||.|||++   +|+||||||+||+++.++.+|++|||+|+
T Consensus        90 ~~~~iv~e~~~~~~~~-~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~~~  165 (318)
T d3blha1          90 GSIYLVFDFCEHDLAG-LLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR  165 (318)
T ss_dssp             -CEEEEEECCCEEHHH-HHTCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             ceEEEEEeccCCCccc-hhhhcccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecceee
Confidence            4679999999765554 4444445677788888999999999999998   99999999999999999999999999997


Q ss_pred             ccc
Q 048219          177 VDE  179 (183)
Q Consensus       177 ~~~  179 (183)
                      ...
T Consensus       166 ~~~  168 (318)
T d3blha1         166 AFS  168 (318)
T ss_dssp             ECC
T ss_pred             ecc
Confidence            543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.9e-29  Score=186.08  Aligned_cols=148  Identities=24%  Similarity=0.319  Sum_probs=119.0

Q ss_pred             HhchhcccCcCcCceEEEEEEc-C-CcEEEEEEccchhhH--HHHHHHHHHHHHhhc---CCCceeeeeceEEe-----C
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-N-RQLVAVNRLEKVLDE--REREFQTEIKVIGRT---HHRNLVRLLGYSLE-----V   96 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~-~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~-----~   96 (183)
                      .|.+.+.||+|+||.||+|.+. + ++.||+|.+......  ....+.+|+.+++.+   +||||+++++++..     .
T Consensus         8 ~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~   87 (305)
T d1blxa_           8 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   87 (305)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred             CEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccC
Confidence            4677789999999999999975 3 567899998643211  122355677766655   79999999999863     2


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceeccc
Q 048219           97 SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGK  176 (183)
Q Consensus        97 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~  176 (183)
                      ...+++||++.++++..........+++..+..++.|++.||.|||++   +|+||||||+|||++..+.+||+|||+++
T Consensus        88 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~dfg~~~  164 (305)
T d1blxa_          88 TKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR  164 (305)
T ss_dssp             EEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             ceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecchhhhh
Confidence            467899999988766555555556677888888999999999999998   99999999999999999999999999998


Q ss_pred             ccc
Q 048219          177 VDE  179 (183)
Q Consensus       177 ~~~  179 (183)
                      ...
T Consensus       165 ~~~  167 (305)
T d1blxa_         165 IYS  167 (305)
T ss_dssp             CCC
T ss_pred             hhc
Confidence            654

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.95  E-value=2e-28  Score=181.90  Aligned_cols=145  Identities=18%  Similarity=0.251  Sum_probs=124.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCC-CceeeeeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH-RNLVRLLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~  106 (183)
                      .|.+.+.||+|+||.||+|.+. +++.+|+|.+....  ....+..|++.+..++| ++++.+++++......++|||++
T Consensus         6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~   83 (293)
T d1csna_           6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   83 (293)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence            4677889999999999999976 57889999875432  22346678888888875 89999999999999999999998


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC-----CCcccccceecccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE-----NRCAKNFRLWIGKVDE  179 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~-----~~~~~i~dfg~a~~~~  179 (183)
                       ++++.+.+......++......++.|++.||.|+|+.   +|+||||||+||+++.     .+.++|+|||+|+...
T Consensus        84 -~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~  157 (293)
T d1csna_          84 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  157 (293)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             -CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence             6899998877666788888899999999999999998   9999999999999974     4679999999998753

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.5e-28  Score=185.06  Aligned_cols=143  Identities=21%  Similarity=0.309  Sum_probs=116.4

Q ss_pred             hchhcccCcCcCceEEEEEEc-CCcEEEEEEccchh--hHHHHHHHHHHHHHhhcCCCceeeeeceEEe------CCeEE
Q 048219           30 DGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL--DEREREFQTEIKVIGRTHHRNLVRLLGYSLE------VSKKI  100 (183)
Q Consensus        30 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~~  100 (183)
                      |.+.+.||+|+||+||+|.+. ++..+|+|++.+..  .....++.+|+.+++.++||||++++++|..      .+..|
T Consensus        19 Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~   98 (355)
T d2b1pa1          19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY   98 (355)
T ss_dssp             EEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred             eEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeE
Confidence            566789999999999999976 58899999987542  3334568899999999999999999999864      36789


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          101 LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       101 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                      ++|||+.+ ++.+.+.   ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.++++|||+++...
T Consensus        99 iv~Ey~~~-~l~~~~~---~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~  170 (355)
T d2b1pa1          99 LVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_dssp             EEEECCSE-EHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             EEEeccch-HHHHhhh---cCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhccc
Confidence            99999965 4545442   3467888889999999999999998   99999999999999999999999999988654

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=1e-27  Score=178.46  Aligned_cols=144  Identities=22%  Similarity=0.255  Sum_probs=118.1

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCceee-eeceEEeCCeEEEEEecc
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR-LLGYSLEVSKKILVYEYM  106 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e~~  106 (183)
                      +|.+.+.||+|+||.||+|.+. +++.||+|.+....  ....+..|+++++.++|++++. +..++...+..+++||++
T Consensus         8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~   85 (299)
T d1ckia_           8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   85 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence            3677889999999999999975 57889999875432  2235678999999998776554 455556778889999999


Q ss_pred             CCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecC---CCcccccceeccccc
Q 048219          107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDE---NRCAKNFRLWIGKVD  178 (183)
Q Consensus       107 ~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~---~~~~~i~dfg~a~~~  178 (183)
                       ++++...+......+++..+..++.|++.||.|+|++   +|+||||||+||+++.   +..++++|||+|+..
T Consensus        86 -~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~  156 (299)
T d1ckia_          86 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  156 (299)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEEC
T ss_pred             -CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcceec
Confidence             5677777766666788899999999999999999998   9999999999999764   457999999999865

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.91  E-value=4e-24  Score=149.22  Aligned_cols=133  Identities=11%  Similarity=0.088  Sum_probs=101.0

Q ss_pred             chhcccCcCcCceEEEEEEcCCcEEEEEEccchh------------------hHHHHHHHHHHHHHhhcCCCceeeeece
Q 048219           31 GFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------------------DEREREFQTEIKVIGRTHHRNLVRLLGY   92 (183)
Q Consensus        31 ~~~~~lg~g~~g~v~~~~~~~~~~~~ik~~~~~~------------------~~~~~~~~~e~~~l~~l~h~~i~~~~~~   92 (183)
                      .+.+.||+|+||.||+|...+++.+|+|.+....                  .........|...+.++.|.+++..+++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            3567899999999999998889999999764211                  0112234568888889999988876644


Q ss_pred             EEeCCeEEEEEeccCCCCHHHHHhcCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCCcccccce
Q 048219           93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL  172 (183)
Q Consensus        93 ~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~~~~i~df  172 (183)
                      .    ..+++||++++....+        +.......++.|++.++.++|+.   +|+|+||||+||++++++ ++++||
T Consensus        83 ~----~~~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~~-~~liDF  146 (191)
T d1zara2          83 E----GNAVLMELIDAKELYR--------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEEG-IWIIDF  146 (191)
T ss_dssp             E----TTEEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETTE-EEECCC
T ss_pred             c----CCEEEEEeeccccccc--------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCCC-EEEEEC
Confidence            2    2378999998765433        12223345789999999999998   999999999999999655 789999


Q ss_pred             ecccccc
Q 048219          173 WIGKVDE  179 (183)
Q Consensus       173 g~a~~~~  179 (183)
                      |.|+...
T Consensus       147 G~a~~~~  153 (191)
T d1zara2         147 PQSVEVG  153 (191)
T ss_dssp             TTCEETT
T ss_pred             CCcccCC
Confidence            9997654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=6.3e-23  Score=155.89  Aligned_cols=149  Identities=23%  Similarity=0.246  Sum_probs=112.4

Q ss_pred             HhchhcccCcCcCceEEEEEEc-CCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-----------CCceeeeeceEEe-
Q 048219           29 TDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-----------HRNLVRLLGYSLE-   95 (183)
Q Consensus        29 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~i~~~~~~~~~-   95 (183)
                      +|.+.+.||+|+||+||+|+.. +++.||+|.+.+.. .....+.+|+.+++.+.           |+|++++++++.. 
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            3778899999999999999975 58899999987643 22345677888777664           5789999888754 


Q ss_pred             -CCeEEEEEeccCCCC-HHHHHh-cCCCCCChHHHHHHHHHHHHHHHHhhhCCCCCceecCCCCCCEEecCCC------c
Q 048219           96 -VSKKILVYEYMSNGS-LADILF-NAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR------C  166 (183)
Q Consensus        96 -~~~~~lv~e~~~~~~-l~~~l~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl~~~nil~~~~~------~  166 (183)
                       ....+++++++.... ...... .......+..+..++.|++.|+.|||+.  .+|+||||||+||+++..+      .
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~--~~IvHrDlKp~NIll~~~~~~~~~~~  170 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENLIQ  170 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhh--cCcccccCChhHeeeeccCcccccce
Confidence             456666776654433 222222 2334567788888999999999999973  2899999999999998665      3


Q ss_pred             ccccceeccccccc
Q 048219          167 AKNFRLWIGKVDEA  180 (183)
Q Consensus       167 ~~i~dfg~a~~~~~  180 (183)
                      ++++|||.|.....
T Consensus       171 ~kl~dfg~s~~~~~  184 (362)
T d1q8ya_         171 IKIADLGNACWYDE  184 (362)
T ss_dssp             EEECCCTTCEETTB
T ss_pred             eeEeeccccccccc
Confidence            89999999986543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.72  E-value=3.7e-08  Score=70.10  Aligned_cols=134  Identities=13%  Similarity=0.062  Sum_probs=83.5

Q ss_pred             CcCceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEeccCCCCHHHHHhc
Q 048219           39 GSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN  117 (183)
Q Consensus        39 g~~g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~  117 (183)
                      ++.+.||+... +++.+.+|+...........+..|...+..+. +-.+++++.+....+..+++|++++|.++.+....
T Consensus        25 ~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~  103 (263)
T d1j7la_          25 MSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED  103 (263)
T ss_dssp             CSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTT
T ss_pred             CCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccccccc
Confidence            33457887653 44456677765433223334566777777664 33456777777778889999999998777554321


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhhC-----------------------------------------------------
Q 048219          118 AEKQPNWIERTGIARDIARGILYLHDE-----------------------------------------------------  144 (183)
Q Consensus       118 ~~~~~~~~~~~~i~~~i~~~l~~lh~~-----------------------------------------------------  144 (183)
                      .   ...   ..+..++...+..+|+.                                                     
T Consensus       104 ~---~~~---~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  177 (263)
T d1j7la_         104 E---QSP---EKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTE  177 (263)
T ss_dssp             C---SCH---HHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHS
T ss_pred             c---ccH---HHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhc
Confidence            1   111   11223333333333321                                                     


Q ss_pred             ---CCCCceecCCCCCCEEecCCCcccccceecccccc
Q 048219          145 ---CETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE  179 (183)
Q Consensus       145 ---~~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~~  179 (183)
                         ....++|+|+.+.||++++++..-++||+.|..+.
T Consensus       178 ~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~g~  215 (263)
T d1j7la_         178 KPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRAD  215 (263)
T ss_dssp             CCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEE
T ss_pred             CCcCCcEEEEeeccCcceeecCCceEEEeechhcccCC
Confidence               01237899999999999987767799999988764

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.15  E-value=2.9e-06  Score=59.70  Aligned_cols=73  Identities=16%  Similarity=0.121  Sum_probs=47.2

Q ss_pred             cCcCcC-ceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCC--CceeeeeceEEeCCeEEEEEeccCCCCH
Q 048219           36 VGRGSS-GTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH--RNLVRLLGYSLEVSKKILVYEYMSNGSL  111 (183)
Q Consensus        36 lg~g~~-g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~l  111 (183)
                      +..|.. ..||+.....+..+.+|......   ...+..|...++.+..  ..+++++.+..+.+..+++|++++|.++
T Consensus        18 ~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          18 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             CSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             cCCcccCCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            344443 56888777667677777654321   2235567777766632  2356677777778888999999987544

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.92  E-value=2.8e-05  Score=58.33  Aligned_cols=75  Identities=13%  Similarity=0.130  Sum_probs=44.3

Q ss_pred             cccCcCcCceEEEEEEcC-CcEEEEEEccch---h----hHHHHHHHHHHHHHhhcC-C--CceeeeeceEEeCCeEEEE
Q 048219           34 EKVGRGSSGTVYKGAMIN-RQLVAVNRLEKV---L----DEREREFQTEIKVIGRTH-H--RNLVRLLGYSLEVSKKILV  102 (183)
Q Consensus        34 ~~lg~g~~g~v~~~~~~~-~~~~~ik~~~~~---~----~~~~~~~~~e~~~l~~l~-h--~~i~~~~~~~~~~~~~~lv  102 (183)
                      +.+|.|....||+..... ++.+.+|.-...   .    +....+...|.+.++.+. +  ..+++++.  .++...+++
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~d~~~~~lv  109 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY--SDTEMAVTV  109 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE--EETTTTEEE
T ss_pred             EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEE--EcCCCCEEE
Confidence            368999999999987544 566777764321   0    111223456777776552 2  23444443  355667899


Q ss_pred             EeccCCCC
Q 048219          103 YEYMSNGS  110 (183)
Q Consensus       103 ~e~~~~~~  110 (183)
                      ||++++..
T Consensus       110 mE~L~~~~  117 (392)
T d2pula1         110 MEDLSHLK  117 (392)
T ss_dssp             ECCCTTSE
T ss_pred             EeccCCcc
Confidence            99997643

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.68  E-value=0.0019  Score=47.94  Aligned_cols=69  Identities=13%  Similarity=0.077  Sum_probs=39.8

Q ss_pred             ccCcCcCceEEEEEEcCC--------cEEEEEEccchhhHHHHHHHHHHHHHhhcC-CCceeeeeceEEeCCeEEEEEec
Q 048219           35 KVGRGSSGTVYKGAMINR--------QLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEY  105 (183)
Q Consensus        35 ~lg~g~~g~v~~~~~~~~--------~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~  105 (183)
                      .|+.|..-.+|+....++        ..+.++......  ......+|..+++.+. +.-.+++++++.    -++++||
T Consensus        49 ~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~--~~idr~~E~~i~~~ls~~gl~Pkll~~~~----~g~I~ef  122 (395)
T d1nw1a_          49 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS----GGRLEEY  122 (395)
T ss_dssp             EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET----TEEEECC
T ss_pred             EcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc--hhhHHHHHHHHHHHHHhCCCCCeEEEEcC----CceEEEE
Confidence            466677778898875432        345555543221  1223456778787764 333445665542    2578898


Q ss_pred             cCCC
Q 048219          106 MSNG  109 (183)
Q Consensus       106 ~~~~  109 (183)
                      ++|.
T Consensus       123 i~g~  126 (395)
T d1nw1a_         123 IPSR  126 (395)
T ss_dssp             CCEE
T ss_pred             eccc
Confidence            8764

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.60  E-value=0.004  Score=44.96  Aligned_cols=67  Identities=9%  Similarity=-0.019  Sum_probs=40.4

Q ss_pred             ceEEEEEEcCCcEEEEEEccchhhHHHHHHHHHHHHHhhcCCCce--e---ee--eceEEeCCeEEEEEeccCCC
Q 048219           42 GTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL--V---RL--LGYSLEVSKKILVYEYMSNG  109 (183)
Q Consensus        42 g~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i--~---~~--~~~~~~~~~~~lv~e~~~~~  109 (183)
                      ..||++...++..+++|.-.... .....+..|...+..+....+  +   ..  -..+...+..+.++++++|.
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~  109 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGR  109 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred             ceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCc
Confidence            46899888788888888764432 133456778887776632211  1   11  12233456678888888753

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.81  E-value=0.00085  Score=48.23  Aligned_cols=33  Identities=15%  Similarity=0.298  Sum_probs=28.5

Q ss_pred             CCCceecCCCCCCEEecCCCcccccceeccccc
Q 048219          146 ETQIIHCDIKPQNILMDENRCAKNFRLWIGKVD  178 (183)
Q Consensus       146 ~~~i~H~dl~~~nil~~~~~~~~i~dfg~a~~~  178 (183)
                      +.+++|+|+.+.|++++.+...-++||+.|...
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~~  214 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFYFACND  214 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             ccccccCCcchhhhhcccccceeEecccccccc
Confidence            457899999999999998877789999988643