Citrus Sinensis ID: 048389

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560------
MLGALVRRTAASVLKANSIRTRALHLSVLPDAVDRNSEAFVRNSQVMQGLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNNGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYSTARLWDDGIIDPADTRKIIGFCISAALNRPVEDTKYGVFRM
cHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccHHHHHHHccccccccccHHHHcccccccccccccEEEEEEEEccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccHHHHHHHHHHcccccEEEEEccccccccccccccccCEEEEccccEEEEccccHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHccccccccccccHHHHHHHHHccccccccHHccccccEEEEEEEccEEEEEEEcccccccHHHHHHHHHHHHcccccccEEEEccccccccccHHHHHHHHHcccHHHHHHHcccccEEEEEccccccccccccccccccccEEEEccccEEEcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccccccccc
***********SVLKANSIRTRALHLSVLPDAVDRNSEAFVRNSQVMQGLVSELQS********************NKLLPRERIDRLTDPGSSFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNNGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQV******************MFKAKVVEAYEKEGNAYYSTARLWDDGIIDPADTRKIIGFCISAALNRPVEDTKYGVFRM
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLGALVRRTAASVLKANSIRTRALHLSVLPDAVDRNSEAFVRNSQVMQGLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNNGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYSTARLWDDGIIDPADTRKIIGFCISAALNRPVEDTKYGVFRM

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial confidentQ9LDD8
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial probableQ3ULD5
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial probableQ5XIT9

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.4.-.-Forming carbon-carbon bonds.probable
6.4.1.-Ligases that form carbon-carbon bonds.probable
6.4.1.4Methylcrotonoyl-CoA carboxylase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3U9R, chain B
Confidence level:very confident
Coverage over the Query: 25-566
View the alignment between query and template
View the model in PyMOL