Citrus Sinensis ID: 048414

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-------
Protein Sequence
MTQESLESVCLFKRASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIVE
Secondary Structure (PSIPRED)
cccccHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHccccHcccccccccccccHHHHHHHHHHHHHHcccccccEcHHHHHHHHHHccccccHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MTQESLESVCLFkraslykgvsrkdkirgrhhglsqQKKQEIKEAFELfdtdgsgtidAKELNVAMRALGFEMTEEHGIVLVCTIVE
Flexible Loop (DISEMBL)
mtqeslesvclfkraslykgvsrkdkirgrhhglsqqkkqEIKEAFELfdtdgsgtidAKELNVAMRALGfemteehgiVLVCTIVE
Low Complexity Region (SEG)
MTQESLESVCLFKRASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIVE
Disordered region (IsUnstruct)
********VCLFKRASLYKG*************************FELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV*
Disordered Region (DISOPRED)
***************************************QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV*
Disordered Region (DISEMBL)
MTQESLESVCLFKRASLYKGVSRKDKIR**********KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIVE
Disordered Region (DISPRO)
********************************GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIVE
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTQESLESVCLFKRASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIVE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	87	2.2.26 [Sep-21-2011]
P41210	167	Caltractin OS=Atriplex nu	N/A	no	0.724	0.377	0.809	7e-24
O82659	169	Probable calcium-binding	yes	no	0.804	0.414	0.746	1e-23
Q7F0J0	169	Probable calcium-binding	yes	no	0.804	0.414	0.661	4e-20
Q06827	168	Caltractin OS=Scherffelia	N/A	no	0.735	0.380	0.609	5e-16
P54213	169	Caltractin OS=Dunaliella	N/A	no	0.735	0.378	0.609	8e-16
P05434	169	Caltractin OS=Chlamydomon	N/A	no	0.724	0.372	0.609	1e-14
Q338P8	191	Probable calcium-binding	no	no	0.551	0.251	0.770	2e-14
O23184	167	Calcium-binding protein C	no	no	0.678	0.353	0.555	1e-13
P43646	148	Caltractin (Fragment) OS=	N/A	no	0.597	0.351	0.634	3e-12
Q32LE3	172	Centrin-1 OS=Bos taurus G	yes	no	0.816	0.412	0.486	4e-12

>sp|P41210|CATR_ATRNU Caltractin OS=Atriplex nummularia PE=2 SV=1

 Score =  108 bits (271), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 51/63 (80%), Positives = 56/63 (88%)

Query: 23 RKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLV 82
          RKDK RGRHHGL+QQK+QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE    ++
Sbjct: 8  RKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMI 67

Query: 83 CTI 85
            +
Sbjct: 68 ADV 70

Plays a fundamental role in microtubule-organizing center structure and function.
Atriplex nummularia (taxid: 3553)

>sp|O82659|CML20_ARATH Probable calcium-binding protein CML20 OS=Arabidopsis thaliana GN=CML20 PE=1 SV=1

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/71 (74%), Positives = 61/71 (85%), Gaps = 1/71 (1%)

Query: 15 ASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 74
          +S+Y+ VSRK+K R RHHGL+ QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 2  SSIYRTVSRKEKPR-RHHGLTTQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 75 EEHGIVLVCTI 85
          EE    ++  +
Sbjct: 61 EEQINKMIADV 71

Potential calcium sensor.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7F0J0|CML13_ORYSJ Probable calcium-binding protein CML13 OS=Oryza sativa subsp. japonica GN=CML13 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 47/71 (66%), Positives = 58/71 (81%), Gaps = 1/71 (1%)

Query: 16 SLYKGVSRKDKIRG-RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 74
          S  KG +R+++ RG R HGL++QK+QEIKEAF+LFDTD SGTIDAKELNVAMRALGFEMT
Sbjct: 2  STVKGQTRRERPRGARPHGLTKQKRQEIKEAFDLFDTDNSGTIDAKELNVAMRALGFEMT 61

Query: 75 EEHGIVLVCTI 85
          EE    ++  +
Sbjct: 62 EEQINQMIADV 72

Potential calcium sensor.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q06827|CATR_SCHDU Caltractin OS=Scherffelia dubia PE=1 SV=1

 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 51/64 (79%)

Query: 22 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVL 81
          +R+DK + R  GL++++KQEI+EAF+LFDTDGSGTIDAKEL VAMRALGFE  +E    +
Sbjct: 9  ARRDKAKTRSAGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKM 68

Query: 82 VCTI 85
          +  I
Sbjct: 69 IADI 72

This calcium-binding protein is found in the basal body complexes (the functional homolog of the centrosome in animal cell). In mitotic cells it is specifically associated with the poles of the mitotic spindles at the sites of the duplicated basal body complexes.

Scherffelia dubia (taxid: 3190)

>sp|P54213|CATR_DUNSA Caltractin OS=Dunaliella salina PE=2 SV=1

 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 52/64 (81%)

Query: 22 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVL 81
          +R+D+ +GR  GL++++KQEI+EAF+LFDTDGSGTIDAKEL VAMRALGFE  +E    +
Sbjct: 10 ARRDQKKGRVGGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKM 69

Query: 82 VCTI 85
          +  I
Sbjct: 70 IADI 73

This calcium-binding protein is found in the basal body complexes (the functional homolog of the centrosome in animal cell). In mitotic cells it is specifically associated with the poles of the mitotic spindles at the sites of the duplicated basal body complexes.

Dunaliella salina (taxid: 3046)

>sp|P05434|CATR_CHLRE Caltractin OS=Chlamydomonas reinhardtii PE=1 SV=1

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 22 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVL 81
          +R+D+ +GR  GL++++KQEI+EAF+LFDTDGSGTIDAKEL VAMRALGFE  +E    +
Sbjct: 11 ARRDQKKGRV-GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKM 69

Query: 82 VCTI 85
          +  I
Sbjct: 70 ISEI 73

This calcium-binding protein is found in the basal body complexes (the functional homolog of the centrosome in animal cell). In mitotic cells it is specifically associated with the poles of the mitotic spindles at the sites of the duplicated basal body complexes.

Chlamydomonas reinhardtii (taxid: 3055)

>sp|Q338P8|CML8_ORYSJ Probable calcium-binding protein CML8 OS=Oryza sativa subsp. japonica GN=CML8 PE=2 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/48 (77%), Positives = 41/48 (85%)

Query: 30 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          R   L+ QK++EIKEAF+LFDTDGSGTID KELNVAMRALGFEMT E 
Sbjct: 36 RKKRLTAQKRKEIKEAFDLFDTDGSGTIDPKELNVAMRALGFEMTPEQ 83

Potential calcium sensor.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|O23184|CML19_ARATH Calcium-binding protein CML19 OS=Arabidopsis thaliana GN=CML19 PE=2 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 48/63 (76%), Gaps = 4/63 (6%)

Query: 15 ASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 74
          A L +G+    K +G+ +GL+ QK++EI+E F+LFD DGSG+IDA ELNVAMR+LGFEM 
Sbjct: 5  AQLRRGL----KPKGKTYGLTNQKRREIREIFDLFDIDGSGSIDASELNVAMRSLGFEMN 60

Query: 75 EEH 77
           + 
Sbjct: 61 NQQ 63

Potential calcium sensor that binds calcium in vitro.

Arabidopsis thaliana (taxid: 3702)

>sp|P43646|CATR_TETST Caltractin (Fragment) OS=Tetraselmis striata PE=2 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/52 (63%), Positives = 43/52 (82%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI 85
          L++++KQ+I+EAF+LFDTDGSGTIDAKEL VAMRALGFE  +E    ++  I
Sbjct: 1  LTEEQKQDIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADI 52

This calcium-binding protein is found in the basal body complexes (the functional homolog of the centrosome in animal cell). In mitotic cells it is specifically associated with the poles of the mitotic spindles at the sites of the duplicated basal body complexes.

Tetraselmis striata (taxid: 3165)

>sp|Q32LE3|CETN1_BOVIN Centrin-1 OS=Bos taurus GN=CETN1 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%)

Query: 14 RASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 73
          R       S+K K+ G    L++++KQE++EAF+LFD DGSGTID KEL VAMRALGFE 
Sbjct: 6  RKPTVASTSQKRKV-GPKPELTEEQKQEVREAFDLFDADGSGTIDVKELKVAMRALGFEP 64

Query: 74 TEEHGIVLVCTI 85
           +E    ++  +
Sbjct: 65 RKEEMKRMIADV 76

Plays a fundamental role in microtubule-organizing center structure and function.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	87
255565162	170	Caltractin, putative [Ricinus communis]	0.816	0.417	0.819	2e-25
224084336	169	predicted protein [Populus trichocarpa]	0.816	0.420	0.760	2e-24
449460604	168	PREDICTED: probable calcium-binding prot	0.804	0.416	0.774	6e-23
729051	167	RecName: Full=Caltractin; AltName: Full=	0.724	0.377	0.809	3e-22
15229732	169	putative calcium-binding protein CML20 [	0.804	0.414	0.746	5e-22
6358509	177	centrin [Nicotiana tabacum]	0.816	0.401	0.704	5e-22
6358511	177	centrin [Nicotiana tabacum]	0.816	0.401	0.704	6e-22
297816286	169	predicted protein [Arabidopsis lyrata su	0.804	0.414	0.746	1e-21
148908441	173	unknown [Picea sitchensis]	0.758	0.381	0.742	1e-20
224285921	147	unknown [Picea sitchensis]	0.666	0.394	0.844	3e-20

>gi|255565162|ref|XP_002523573.1| Caltractin, putative [Ricinus communis] gi|223537135|gb|EEF38768.1| Caltractin, putative [Ricinus communis]

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 63/72 (87%), Gaps = 1/72 (1%)

Query: 15 ASLYKGVSRKD-KIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 73
          ASLY+G SRKD K RGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM
Sbjct: 2  ASLYRGASRKDIKPRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 61

Query: 74 TEEHGIVLVCTI 85
          TEE    ++  +
Sbjct: 62 TEEQITQMIADV 73

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084336|ref|XP_002307263.1| predicted protein [Populus trichocarpa] gi|222856712|gb|EEE94259.1| predicted protein [Populus trichocarpa]

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/71 (76%), Positives = 61/71 (85%)

Query: 15 ASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 74
          AS YKG +RKDK RGRHHGL+QQK+QEIKEAF+LFDTDGSGTIDAKELNVAMRALGFEM 
Sbjct: 2  ASFYKGQNRKDKPRGRHHGLTQQKRQEIKEAFDLFDTDGSGTIDAKELNVAMRALGFEMN 61

Query: 75 EEHGIVLVCTI 85
          EE    ++  +
Sbjct: 62 EEQIDQMIADV 72

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460604|ref|XP_004148035.1| PREDICTED: probable calcium-binding protein CML20-like [Cucumis sativus] gi|449502722|ref|XP_004161724.1| PREDICTED: probable calcium-binding protein CML20-like [Cucumis sativus]

 Score =  111 bits (277), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 55/71 (77%), Positives = 62/71 (87%), Gaps = 1/71 (1%)

Query: 15 ASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 74
          ASLY+GVSRK+K +GRH GL+ QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 2  ASLYRGVSRKEKPKGRH-GLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 75 EEHGIVLVCTI 85
          EE    ++  +
Sbjct: 61 EEQIKQMIADV 71

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|729051|sp|P41210.1|CATR_ATRNU RecName: Full=Caltractin; AltName: Full=Centrin gi|444342|prf||1906390A caltractin-like protein

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/63 (80%), Positives = 56/63 (88%)

Query: 23 RKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLV 82
          RKDK RGRHHGL+QQK+QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE    ++
Sbjct: 8  RKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMI 67

Query: 83 CTI 85
            +
Sbjct: 68 ADV 70

Source: Atriplex nummularia

Species: Atriplex nummularia

Genus: Atriplex

Family: Amaranthaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229732|ref|NP_190605.1| putative calcium-binding protein CML20 [Arabidopsis thaliana] gi|75318868|sp|O82659.1|CML20_ARATH RecName: Full=Probable calcium-binding protein CML20; AltName: Full=Calmodulin-like protein 20; AltName: Full=Centrin 1; Short=AtCEN1 gi|3688162|emb|CAA08773.1| caltractin [Arabidopsis thaliana] gi|6523047|emb|CAB62315.1| centrin [Arabidopsis thaliana] gi|51968860|dbj|BAD43122.1| centrin [Arabidopsis thaliana] gi|51968892|dbj|BAD43138.1| centrin [Arabidopsis thaliana] gi|51971853|dbj|BAD44591.1| centrin [Arabidopsis thaliana] gi|51971961|dbj|BAD44645.1| centrin [Arabidopsis thaliana] gi|98960913|gb|ABF58940.1| At3g50360 [Arabidopsis thaliana] gi|332645137|gb|AEE78658.1| putative calcium-binding protein CML20 [Arabidopsis thaliana]

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 53/71 (74%), Positives = 61/71 (85%), Gaps = 1/71 (1%)

Query: 15 ASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 74
          +S+Y+ VSRK+K R RHHGL+ QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 2  SSIYRTVSRKEKPR-RHHGLTTQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 75 EEHGIVLVCTI 85
          EE    ++  +
Sbjct: 61 EEQINKMIADV 71

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6358509|gb|AAF07221.1|AF072519_1 centrin [Nicotiana tabacum]

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/71 (70%), Positives = 60/71 (84%)

Query: 15 ASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 74
          ASLY+G SR++K RGR+ GL+QQK+QEI+EAFELFDTD SGTIDAKELNVAMRALGFE T
Sbjct: 10 ASLYRGASRREKPRGRNQGLTQQKRQEIREAFELFDTDNSGTIDAKELNVAMRALGFEAT 69

Query: 75 EEHGIVLVCTI 85
          EE    ++  +
Sbjct: 70 EEEINQMIAEV 80

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6358511|gb|AAF07222.1|AF072520_1 centrin [Nicotiana tabacum]

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 50/71 (70%), Positives = 60/71 (84%)

Query: 15 ASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 74
          ASLY+G SR++K RGR+ GL+QQK+QEI+EAFELFDTD SGTIDAKELNVAMRALGFE T
Sbjct: 10 ASLYRGASRREKPRGRNQGLTQQKRQEIREAFELFDTDNSGTIDAKELNVAMRALGFEAT 69

Query: 75 EEHGIVLVCTI 85
          EE    ++  +
Sbjct: 70 EEEINRMIAEV 80

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297816286|ref|XP_002876026.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297321864|gb|EFH52285.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 1/71 (1%)

Query: 15 ASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 74
          +S  +GVSRK+K R RHHGL+ QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 2  SSFNRGVSRKEKPR-RHHGLTTQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 75 EEHGIVLVCTI 85
          EE    ++  +
Sbjct: 61 EEQINKMIADV 71

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148908441|gb|ABR17333.1| unknown [Picea sitchensis]

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/66 (74%), Positives = 57/66 (86%)

Query: 20 GVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGI 79
          GVSR++K +GR HGL+ QK+QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE   
Sbjct: 12 GVSRREKHKGRKHGLTDQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQIR 71

Query: 80 VLVCTI 85
           ++  +
Sbjct: 72 QMIADV 77

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224285921|gb|ACN40674.1| unknown [Picea sitchensis]

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/58 (84%), Positives = 54/58 (93%)

Query: 20 GVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          GVSR++K +GR HGL+ QK+QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 
Sbjct: 12 GVSRREKHKGRKHGLTDQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQ 69

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	87
TAIR|locus:2074780	169	CEN2 "AT3G50360" [Arabidopsis	0.701	0.360	0.854	1.3e-22
UNIPROTKB|P05434	169	P05434 "Caltractin" [Chlamydom	0.620	0.319	0.690	6.9e-15
UNIPROTKB|F1NLM7	176	CETN1 "Uncharacterized protein	0.758	0.375	0.565	2.1e-13
TAIR|locus:2115030	171	CEN2 "centrin 2" [Arabidopsis	0.586	0.298	0.627	3.4e-13
UNIPROTKB|F1Q156	204	F1Q156 "Uncharacterized protei	0.724	0.308	0.553	5.6e-13
UNIPROTKB|J9P1A0	172	CETN1 "Uncharacterized protein	0.724	0.366	0.553	7.1e-13
ZFIN|ZDB-GENE-030826-21	172	cetn4 "centrin 4" [Danio rerio	0.494	0.25	0.767	9.1e-13
UNIPROTKB|Q12798	172	CETN1 "Centrin-1" [Homo sapien	0.724	0.366	0.553	1.5e-12
UNIPROTKB|I3L7N8	172	CETN1 "Uncharacterized protein	0.724	0.366	0.553	1.5e-12
UNIPROTKB|F1NM71	176	CETN2 "Uncharacterized protein	0.724	0.357	0.553	1.9e-12

TAIR|locus:2074780 CEN2 "AT3G50360" [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 53/62 (85%), Positives = 58/62 (93%)

Query:    15 ASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 74
             +S+Y+ VSRK+K R RHHGL+ QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct:     2 SSIYRTVSRKEKPR-RHHGLTTQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query:    75 EE 76
             EE
Sbjct:    61 EE 62

GO:0005509 "calcium ion binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

GO:0030048 "actin filament-based movement" evidence=RCA

GO:0051645 "Golgi localization" evidence=RCA

GO:0051646 "mitochondrion localization" evidence=RCA

GO:0060151 "peroxisome localization" evidence=RCA

UNIPROTKB|P05434 P05434 "Caltractin" [Chlamydomonas reinhardtii (taxid:3055)]

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 38/55 (69%), Positives = 49/55 (89%)

Query:    22 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
             +R+D+ +GR  GL++++KQEI+EAF+LFDTDGSGTIDAKEL VAMRALGFE  +E
Sbjct:    11 ARRDQKKGRV-GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKE 64

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1NLM7 CETN1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 39/69 (56%), Positives = 52/69 (75%)

Query:    11 LFKRASLYK--GVSRKDKIR-GRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMR 67
             LF +AS Y+  G+S   + + G    L++++KQEI+EAF+LFDTDGSG+ID KEL VAMR
Sbjct:     3 LFPKASNYRKPGLSTAQRKKSGLKPELTEEQKQEIREAFDLFDTDGSGSIDIKELKVAMR 62

Query:    68 ALGFEMTEE 76
             ALGFE  +E
Sbjct:    63 ALGFEPKKE 71

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

TAIR|locus:2115030 CEN2 "centrin 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 32/51 (62%), Positives = 43/51 (84%)

Query:    26 KIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
             K +G+ +GL+ QK++EI+E F+LFD DGSG+IDA ELNVAMR+LGFEM  +
Sbjct:    16 KPKGKTYGLTNQKRREIREIFDLFDIDGSGSIDASELNVAMRSLGFEMNNQ 66

GO:0005509 "calcium ion binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0005737 "cytoplasm" evidence=IDA

GO:0006281 "DNA repair" evidence=IDA

GO:0030048 "actin filament-based movement" evidence=RCA

GO:0051645 "Golgi localization" evidence=RCA

GO:0051646 "mitochondrion localization" evidence=RCA

GO:0060151 "peroxisome localization" evidence=RCA

UNIPROTKB|F1Q156 F1Q156 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 36/65 (55%), Positives = 49/65 (75%)

Query:    12 FKRASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF 71
             FK+AS+     RK ++  +   L++++KQEI+EAF+LFD DG+GTID KEL VAMRALGF
Sbjct:    37 FKKASMASSAQRK-RMSPKPE-LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGF 94

Query:    72 EMTEE 76
             E  +E
Sbjct:    95 EPKKE 99

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9P1A0 CETN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 36/65 (55%), Positives = 49/65 (75%)

Query:    12 FKRASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF 71
             FK++++    S+K K+ G    L++ +KQE++EAF+LFD DGSGTID KEL VAMRALGF
Sbjct:     5 FKKSNV-ASTSQKRKV-GPKPELTEDQKQEVREAFDLFDADGSGTIDVKELKVAMRALGF 62

Query:    72 EMTEE 76
             E  +E
Sbjct:    63 EPRKE 67

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-030826-21 cetn4 "centrin 4" [Danio rerio (taxid:7955)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 33/43 (76%), Positives = 39/43 (90%)

Query:    34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
             L++++KQEIKEAF+LFDTDGSGTID KEL VAMRALGFE  +E
Sbjct:    24 LTEEQKQEIKEAFDLFDTDGSGTIDVKELKVAMRALGFEPKKE 66

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000226 "microtubule cytoskeleton organization" evidence=IMP

GO:0022027 "interkinetic nuclear migration" evidence=IMP

UNIPROTKB|Q12798 CETN1 "Centrin-1" [Homo sapiens (taxid:9606)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 36/65 (55%), Positives = 47/65 (72%)

Query:    12 FKRASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF 71
             FK+ S      +K K+  +   L++ +KQE++EAF+LFD DGSGTIDAKEL VAMRALGF
Sbjct:     5 FKKPSA-ASTGQKRKVAPKPE-LTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGF 62

Query:    72 EMTEE 76
             E  +E
Sbjct:    63 EPRKE 67

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

GO:0031683 "G-protein beta/gamma-subunit complex binding" evidence=IEA

GO:0032391 "photoreceptor connecting cilium" evidence=IEA

GO:0032795 "heterotrimeric G-protein binding" evidence=IEA

GO:0034605 "cellular response to heat" evidence=IEA

GO:0000922 "spindle pole" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|I3L7N8 CETN1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 36/65 (55%), Positives = 47/65 (72%)

Query:    12 FKRASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF 71
             FK+  +    S+K K+ G    L++ +KQE++EAF+LFD DGSGTID KEL VAMRALGF
Sbjct:     5 FKKPQV-ASTSQKRKV-GPKPELTEDQKQEVREAFDLFDADGSGTIDVKELKVAMRALGF 62

Query:    72 EMTEE 76
             E  +E
Sbjct:    63 EPRKE 67

GO:0034605 "cellular response to heat" evidence=IEA

GO:0032795 "heterotrimeric G-protein binding" evidence=IEA

GO:0032391 "photoreceptor connecting cilium" evidence=IEA

GO:0031683 "G-protein beta/gamma-subunit complex binding" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0000922 "spindle pole" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1NM71 CETN2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 36/65 (55%), Positives = 47/65 (72%)

Query:    12 FKRASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF 71
             FK+ SL  G + + K       L++++KQEI+EAF+LFDTDG+G ID KEL VAMRALGF
Sbjct:     9 FKKPSL--GAASQRKKSSPKPELTEEQKQEIREAFDLFDTDGTGNIDVKELKVAMRALGF 66

Query:    72 EMTEE 76
             E  +E
Sbjct:    67 EPKKE 71

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O82659	CML20_ARATH	No assigned EC number	0.7464	0.8045	0.4142	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_V0513	hypothetical protein (169 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.29.316.1	hypothetical protein (380 aa)						•			0.800

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	87
PTZ00183	158	PTZ00183, PTZ00183, centrin; Provisional	2e-16
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	6e-10
PTZ00184	149	PTZ00184, PTZ00184, calmodulin; Provisional	2e-09
COG5126	160	COG5126, FRQ1, Ca2+-binding protein (EF-Hand super	8e-08
pfam13405	30	pfam13405, EF_hand_4, EF-hand domain	2e-07
smart00054	29	smart00054, EFh, EF-hand, calcium binding motif	5e-07
pfam00036	29	pfam00036, efhand, EF hand	9e-07
COG5126	160	COG5126, FRQ1, Ca2+-binding protein (EF-Hand super	6e-06
PTZ00184	149	PTZ00184, PTZ00184, calmodulin; Provisional	3e-05
pfam13202	25	pfam13202, EF_hand_3, EF hand	8e-05
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	5e-04
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	0.001

>gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional

 Score = 68.9 bits (169), Expect = 2e-16
 Identities = 31/44 (70%), Positives = 39/44 (88%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          GL++ +K+EI+EAF+LFDTDGSGTID KEL VAMR+LGFE  +E
Sbjct: 10 GLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKE 53

Length = 158

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 49.9 bits (120), Expect = 6e-10
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 41 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          E++EAF LFD DG GTI A EL  A+++LG  ++EE
Sbjct: 1  ELREAFRLFDKDGDGTISADELKAALKSLGEGLSEE 36

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional

 Score = 50.5 bits (121), Expect = 2e-09
 Identities = 23/42 (54%), Positives = 28/42 (66%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 5  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 46

Length = 149

>gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

 Score = 46.5 bits (111), Expect = 8e-08
 Identities = 21/43 (48%), Positives = 30/43 (69%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          L++++ QE+KEAF+LFD D  G ID  EL   +R+LGF  +E 
Sbjct: 14 LTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEA 56

Length = 160

>gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain

 Score = 42.6 bits (101), Expect = 2e-07
 Identities = 18/30 (60%), Positives = 24/30 (80%)

Query: 41 EIKEAFELFDTDGSGTIDAKELNVAMRALG 70
          E++EAF+LFD DG G I A+EL  A+R+LG
Sbjct: 1  ELREAFKLFDKDGDGYISAEELRKALRSLG 30

Length = 30

>gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif

 Score = 41.6 bits (99), Expect = 5e-07
 Identities = 16/29 (55%), Positives = 20/29 (68%)

Query: 41 EIKEAFELFDTDGSGTIDAKELNVAMRAL 69
          E+KEAF LFD DG G ID +E    ++AL
Sbjct: 1  ELKEAFRLFDKDGDGKIDFEEFKDLLKAL 29

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29

>gnl|CDD|200946 pfam00036, efhand, EF hand

 Score = 40.9 bits (97), Expect = 9e-07
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 41 EIKEAFELFDTDGSGTIDAKELNVAMRAL 69
          E+KEAF+ FD DG G I  +E    ++ L
Sbjct: 1  ELKEAFKEFDKDGDGKISFEEFKELLKKL 29

The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29

>gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

 Score = 41.5 bits (98), Expect = 6e-06
 Identities = 16/39 (41%), Positives = 27/39 (69%)

Query: 38  KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           K++E++EAF+LFD D  G I   EL   +++LG  +++E
Sbjct: 90  KEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDE 128

Length = 160

>gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional

 Score = 39.4 bits (92), Expect = 3e-05
 Identities = 20/38 (52%), Positives = 28/38 (73%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           ++EIKEAF++FD DG+G I A EL   M  LG ++T+E
Sbjct: 83  EEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDE 120

Length = 149

>gnl|CDD|205383 pfam13202, EF_hand_3, EF hand

 Score = 35.7 bits (84), Expect = 8e-05
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 42 IKEAFELFDTDGSGTIDAKEL 62
          +K+ F  FDT+G G I  +EL
Sbjct: 1  LKDLFRQFDTNGDGKISKEEL 21

Length = 25

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMR 67
             ++EI E     D DG G ID +E    M 
Sbjct: 32 GLSEEEIDEMIREVDKDGDGKIDFEEFLELMA 63

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 33.9 bits (78), Expect = 0.001
 Identities = 14/31 (45%), Positives = 21/31 (67%)

Query: 47 ELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          +L D DG G ID +EL   ++ALG ++T+E 
Sbjct: 1  KLLDKDGDGYIDVEELRKLLKALGLKLTDEE 31

Length = 60

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	87
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.21
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	99.2
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.16
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.09
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.06
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	99.03
PF13405	31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	99.0
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	99.0
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	98.98
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	98.95
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	98.89
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	98.89
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	98.89
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	98.83
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	98.78
KOG0041	244	consensus Predicted Ca2+-binding protein, EF-Hand	98.78
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	98.78
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	98.76
cd00213	88	S-100 S-100: S-100 domain, which represents the la	98.75
PTZ00183	158	centrin; Provisional	98.73
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	98.66
cd00052	67	EH Eps15 homology domain; found in proteins implic	98.63
PTZ00184	149	calmodulin; Provisional	98.63
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	98.6
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	98.59
PF13202	25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	98.53
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	98.47
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	98.44
PTZ00183	158	centrin; Provisional	98.37
PF14658	66	EF-hand_9: EF-hand domain	98.34
PTZ00184	149	calmodulin; Provisional	98.29
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	98.16
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	98.06
smart00054	29	EFh EF-hand, calcium binding motif. EF-hands are c	98.02
KOG0036	463	consensus Predicted mitochondrial carrier protein	98.0
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	97.92
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	97.87
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	97.8
PLN02964	644	phosphatidylserine decarboxylase	97.75
PLN02964	644	phosphatidylserine decarboxylase	97.68
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	97.67
KOG0038	189	consensus Ca2+-binding kinase interacting protein	97.47
KOG0040	2399	consensus Ca2+-binding actin-bundling protein (spe	97.36
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	97.34
KOG0046	627	consensus Ca2+-binding actin-bundling protein (fim	97.06
PF12763	104	EF-hand_4: Cytoskeletal-regulatory complex EF hand	97.01
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	96.98
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	96.86
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	96.67
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	96.63
KOG0042	680	consensus Glycerol-3-phosphate dehydrogenase [Ener	96.55
KOG0036	463	consensus Predicted mitochondrial carrier protein	96.55
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	96.39
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	96.37
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	96.36
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	96.3
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	96.25
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	96.15
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	96.1
PF14788	51	EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QA	95.96
cd00052	67	EH Eps15 homology domain; found in proteins implic	95.93
cd05024	91	S-100A10 S-100A10: A subgroup of the S-100A10 doma	95.88
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	95.83
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	95.7
PRK12309	391	transaldolase/EF-hand domain-containing protein; P	95.54
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	95.53
PRK12309	391	transaldolase/EF-hand domain-containing protein; P	95.52
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	95.48
PF09279	83	EF-hand_like: Phosphoinositide-specific phospholip	95.48
cd00213	88	S-100 S-100: S-100 domain, which represents the la	95.42
cd05024	91	S-100A10 S-100A10: A subgroup of the S-100A10 doma	95.22
PF08726	69	EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPr	93.97
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	93.82
PF14658	66	EF-hand_9: EF-hand domain	93.53
PF12763	104	EF-hand_4: Cytoskeletal-regulatory complex EF hand	93.5
KOG3449	112	consensus 60S acidic ribosomal protein P2 [Transla	93.46
KOG2871	449	consensus Uncharacterized conserved protein [Funct	93.34
PF14788	51	EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QA	93.23
PF03672	64	UPF0154: Uncharacterised protein family (UPF0154);	93.18
KOG2643	489	consensus Ca2+ binding protein, contains EF-hand m	92.9
COG3763	71	Uncharacterized protein conserved in bacteria [Fun	92.38
KOG0035	890	consensus Ca2+-binding actin-bundling protein (act	92.13
KOG1707	625	consensus Predicted Ras related/Rac-GTP binding pr	91.63
PF05042	174	Caleosin: Caleosin related protein; InterPro: IPR0	91.58
PRK00523	72	hypothetical protein; Provisional	91.37
KOG1707	625	consensus Predicted Ras related/Rac-GTP binding pr	91.36
KOG2643	489	consensus Ca2+ binding protein, contains EF-hand m	91.3
PTZ00373	112	60S Acidic ribosomal protein P2; Provisional	90.82
PRK01844	72	hypothetical protein; Provisional	90.04
PF10591	113	SPARC_Ca_bdg: Secreted protein acidic and rich in	89.89
KOG4065	144	consensus Uncharacterized conserved protein [Funct	89.28
cd05833	109	Ribosomal_P2 Ribosomal protein P2. This subfamily	89.08
PF00046	57	Homeobox: Homeobox domain not present here.; Inter	89.07
cd00086	59	homeodomain Homeodomain; DNA binding domains invol	89.07
PF09069	90	EF-hand_3: EF-hand; InterPro: IPR015154 Like other	88.57
PF06648	122	DUF1160: Protein of unknown function (DUF1160); In	88.3
PF00404	21	Dockerin_1: Dockerin type I repeat; InterPro: IPR0	87.85
PF01023	44	S_100: S-100/ICaBP type calcium binding domain; In	87.73
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	87.2
KOG4251	362	consensus Calcium binding protein [General functio	86.74
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	86.7
COG2818	188	Tag 3-methyladenine DNA glycosylase [DNA replicati	86.65
PLN00138	113	large subunit ribosomal protein LP2; Provisional	85.27
PF10591	113	SPARC_Ca_bdg: Secreted protein acidic and rich in	84.99
PF13551	112	HTH_29: Winged helix-turn helix	83.89
cd04411	105	Ribosomal_P1_P2_L12p Ribosomal protein P1, P2, and	83.45
PF01885	186	PTS_2-RNA: RNA 2'-phosphotransferase, Tpt1 / KptA	83.37
PRK00819	179	RNA 2'-phosphotransferase; Reviewed	83.31
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	83.09
KOG0169	746	consensus Phosphoinositide-specific phospholipase	82.08
KOG2243	5019	consensus Ca2+ release channel (ryanodine receptor	81.32
KOG2562	493	consensus Protein phosphatase 2 regulatory subunit	81.28
PF03979	82	Sigma70_r1_1: Sigma-70 factor, region 1.1; InterPr	81.26
PF05042	174	Caleosin: Caleosin related protein; InterPro: IPR0	81.15
KOG4251	362	consensus Calcium binding protein [General functio	80.86
TIGR01639	61	P_fal_TIGR01639 Plasmodium falciparum uncharacteri	80.72

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.21  E-value=7.8e-11  Score=73.46  Aligned_cols=59  Identities=39%  Similarity=0.516  Sum_probs=54.9

Q ss_pred             cccCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           28 RGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        28 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ......++.+++.+|+++|..||+|++|.|+..+|..+|+.+|.+++..++..|+..+.
T Consensus         8 ~~~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d   66 (160)
T COG5126           8 LLTFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEID   66 (160)
T ss_pred             hhhcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhcc
Confidence            34457899999999999999999999999999999999999999999999999998865

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.20  E-value=5.7e-11  Score=73.39  Aligned_cols=54  Identities=30%  Similarity=0.385  Sum_probs=51.7

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ..+++.++.+++++|.++|.|++|.|+.+||+.+|.++|...++++|+.|++++
T Consensus        24 amf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea   77 (171)
T KOG0031|consen   24 AMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA   77 (171)
T ss_pred             HHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC
Confidence            568999999999999999999999999999999999999999999999999875

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.16  E-value=9.3e-11  Score=73.12  Aligned_cols=51  Identities=33%  Similarity=0.514  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+..++|+.+|+.||.|++|+|+..+|+.+|+.+|..++.++|+.||+.++
T Consensus        88 ~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d  138 (160)
T COG5126          88 GDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYD  138 (160)
T ss_pred             CCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcC
Confidence            345788999999999999999999999999999999999999999999876

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.09  E-value=6.1e-10  Score=68.56  Aligned_cols=53  Identities=45%  Similarity=0.634  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++.++..+++.+|..||.+++|+|+..+|+.+|+.+|.+++..++..++++++
T Consensus         2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D   54 (151)
T KOG0027|consen    2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEID   54 (151)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            56788899999999999999999999999999999999999999999999875

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.06  E-value=4.6e-10  Score=69.10  Aligned_cols=49  Identities=37%  Similarity=0.612  Sum_probs=46.0

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++++|+.||.|++|+|++.||+.+|..+|.+.+.++++.+|+.++
T Consensus        83 ~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d  131 (151)
T KOG0027|consen   83 SSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVD  131 (151)
T ss_pred             cHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcC
Confidence            4668999999999999999999999999999999999999999998764

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=99.03  E-value=4.7e-10  Score=51.43  Aligned_cols=29  Identities=52%  Similarity=0.833  Sum_probs=26.9

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      +++.+|+.||+|++|+|+.+|+..+|+.|
T Consensus         1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~L   29 (29)
T PF00036_consen    1 ELKEAFREFDKDGDGKIDFEEFKEMMKKL   29 (29)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred             CHHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence            57899999999999999999999999865

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B

Probab=99.00  E-value=6.9e-10  Score=51.43  Aligned_cols=30  Identities=50%  Similarity=0.943  Sum_probs=27.0

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHH-HhC
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMR-ALG   70 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~-~lg   70 (87)
                      +|+.+|+.||.|++|+|+.+||+.+|+ ++|
T Consensus         1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG   31 (31)
T PF13405_consen    1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG   31 (31)
T ss_dssp             HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence            488999999999999999999999999 676

...

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=99.00  E-value=2.5e-09  Score=60.76  Aligned_cols=50  Identities=14%  Similarity=0.168  Sum_probs=45.5

Q ss_pred             HHHHHHHHHhhhhC-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFD-TDGSG-TIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D-~d~~G-~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~   86 (87)
                      .-+..|+++|+.|| ++++| +|+.+||+.+|+.     +|...++++++.+|+.++
T Consensus         5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D   61 (88)
T cd05027           5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLD   61 (88)
T ss_pred             HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhC
Confidence            45678999999998 89999 5999999999999     899999999999999875

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=98.98  E-value=1.7e-09  Score=61.60  Aligned_cols=51  Identities=12%  Similarity=0.137  Sum_probs=46.2

Q ss_pred             HHHHHHHHHHhhhhCC-CCCCcccHHHHHHHHHH-hCCCCCH-HHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDT-DGSGTIDAKELNVAMRA-LGFEMTE-EHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~-d~~G~I~~~el~~~l~~-lg~~~~~-~ei~~li~~~~   86 (87)
                      +.-+..++.+|+.||+ +++|+|+..||+.+|.. +|..++. .+++.||+.++
T Consensus         4 E~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D   57 (89)
T cd05022           4 EKAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLD   57 (89)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhC
Confidence            3457789999999999 99999999999999999 9988888 99999998875

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>smart00027 EH Eps15 homology domain

Probab=98.95  E-value=5.1e-09  Score=60.06  Aligned_cols=52  Identities=13%  Similarity=0.205  Sum_probs=46.9

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++.+++..++.+|..||.+++|.|+.++|+.+|+.+|  ++.++++.++..++
T Consensus         3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d   54 (96)
T smart00027        3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLAD   54 (96)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhc
Confidence            46889999999999999999999999999999999976  68889999988753

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=98.89  E-value=6.9e-09  Score=55.31  Aligned_cols=45  Identities=40%  Similarity=0.660  Sum_probs=38.8

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      .|+++|..||.|++|+|+.+||..++..++...+..+++.++..+
T Consensus         1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~   45 (66)
T PF13499_consen    1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQI   45 (66)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHH
T ss_pred             CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence            478999999999999999999999999999888777777764443

...

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.89  E-value=5.2e-09  Score=63.78  Aligned_cols=51  Identities=31%  Similarity=0.521  Sum_probs=46.5

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVC   83 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~   83 (87)
                      .++.++..+++++|..||..++|+|+..++.++|+.+|.++++.++.+.+.
T Consensus         4 ~~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~   54 (152)
T KOG0030|consen    4 AFTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLG   54 (152)
T ss_pred             ccCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHc
Confidence            456778899999999999999999999999999999999999999977654

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=98.89  E-value=7.5e-09  Score=64.36  Aligned_cols=62  Identities=50%  Similarity=0.700  Sum_probs=55.6

Q ss_pred             ccccccCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           25 DKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        25 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .........+++++..+++.+|..||.+++|+|+++||+.+++.+|+.+..++|..|+.+++
T Consensus        18 ~~~~~~~~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~d   79 (172)
T KOG0028|consen   18 AKPASPKSELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVD   79 (172)
T ss_pred             hccCCCCccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhh
Confidence            44444457889999999999999999999999999999999999999999999999998765

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=98.83  E-value=1.2e-08  Score=63.47  Aligned_cols=50  Identities=34%  Similarity=0.553  Sum_probs=47.2

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +..++++.+|+.||.|++|.|+..+|+.+.+.||.+++.+++.+||.+++
T Consensus       103 dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd  152 (172)
T KOG0028|consen  103 DTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEAD  152 (172)
T ss_pred             CcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhc
Confidence            35788999999999999999999999999999999999999999999875

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=98.78  E-value=3.1e-08  Score=56.61  Aligned_cols=49  Identities=18%  Similarity=0.186  Sum_probs=43.1

Q ss_pred             HHHHHHHHhhhhCC-CC-CCcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDT-DG-SGTIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~-d~-~G~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~   86 (87)
                      -...|+.+|..||. |+ +|+|+.+||+.+|+.     +|..++..+++.+++.++
T Consensus         6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D   61 (94)
T cd05031           6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLD   61 (94)
T ss_pred             HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhC
Confidence            46789999999997 97 699999999999986     577889999999998774

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]

Probab=98.78  E-value=2.4e-08  Score=64.31  Aligned_cols=66  Identities=21%  Similarity=0.254  Sum_probs=58.5

Q ss_pred             CccccccccCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHhC
Q 048414           22 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIVE   87 (87)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~e   87 (87)
                      ......+...+.++..+++.+..+|+.||.+.||+|+..||+.+|..||.+-|.--+..||.+++|
T Consensus        81 ~kv~n~yteF~eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVde  146 (244)
T KOG0041|consen   81 LKVFNVYTEFSEFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDE  146 (244)
T ss_pred             ccccchhhhhhHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhc
Confidence            444555666678999999999999999999999999999999999999998888888999999875

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=98.78  E-value=4.3e-08  Score=55.75  Aligned_cols=49  Identities=12%  Similarity=0.201  Sum_probs=41.8

Q ss_pred             HHHHHHHHhhhhC-CCCCC-cccHHHHHHHHHH-hC----CCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFD-TDGSG-TIDAKELNVAMRA-LG----FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D-~d~~G-~I~~~el~~~l~~-lg----~~~~~~ei~~li~~~~   86 (87)
                      -++.++++|+.|| .+++| +|+..||+.+|+. +|    ..++..+++.+|+.++
T Consensus         7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D   62 (92)
T cd05025           7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELD   62 (92)
T ss_pred             HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHC
Confidence            4578999999997 99999 5999999999986 54    3568899999998875

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.76  E-value=2.6e-08  Score=64.56  Aligned_cols=48  Identities=31%  Similarity=0.502  Sum_probs=43.9

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +..|+.+|+.||+|++|.|+..||+.+|..+|+.++.+-++-|++...
T Consensus       123 i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd  170 (221)
T KOG0037|consen  123 INQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYD  170 (221)
T ss_pred             HHHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhc
Confidence            567999999999999999999999999999999999998888887643

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=98.75  E-value=4e-08  Score=55.31  Aligned_cols=51  Identities=16%  Similarity=0.186  Sum_probs=43.5

Q ss_pred             HHHHHHHHHHhhhhCC--CCCCcccHHHHHHHHHH-hCCCC----CHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDT--DGSGTIDAKELNVAMRA-LGFEM----TEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~--d~~G~I~~~el~~~l~~-lg~~~----~~~ei~~li~~~~   86 (87)
                      +++++.++.+|..||.  +++|+|+.++|..+++. +|..+    +..+++.++..++
T Consensus         4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d   61 (88)
T cd00213           4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLD   61 (88)
T ss_pred             HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhc
Confidence            4678889999999999  89999999999999986 56544    5899999988763

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>PTZ00183 centrin; Provisional

Probab=98.73  E-value=1.1e-07  Score=57.84  Aligned_cols=55  Identities=56%  Similarity=0.904  Sum_probs=50.2

Q ss_pred             CCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           31 HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        31 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ...++++++.+++.+|..+|.+++|.|+..||..+|+.+|..++...+..++..+
T Consensus         8 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~   62 (158)
T PTZ00183          8 RPGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADV   62 (158)
T ss_pred             cCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence            3678999999999999999999999999999999999999888888888888765

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=98.66  E-value=1.5e-07  Score=53.45  Aligned_cols=51  Identities=18%  Similarity=0.295  Sum_probs=44.6

Q ss_pred             HHHHHHHHHHhhhhCC-CC-CCcccHHHHHHHHH---HhCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDT-DG-SGTIDAKELNVAMR---ALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~-d~-~G~I~~~el~~~l~---~lg~~~~~~ei~~li~~~~   86 (87)
                      +..+..+..+|+.||. ++ +|+|+.+||+.+|.   .+|.+++.++++++++.++
T Consensus         6 e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D   61 (88)
T cd05029           6 DQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLD   61 (88)
T ss_pred             HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhc
Confidence            4456789999999998 67 89999999999997   3799999999999998875

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=98.63  E-value=9.8e-08  Score=50.59  Aligned_cols=43  Identities=19%  Similarity=0.203  Sum_probs=37.9

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++++|..+|.+++|.|+.+|+..+|+.+|.  +.++++.++..+.
T Consensus         1 ~~~~F~~~D~~~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d   43 (67)
T cd00052           1 YDQIFRSLDPDGDGLISGDEARPFLGKSGL--PRSVLAQIWDLAD   43 (67)
T ss_pred             ChHHHHHhCCCCCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhc
Confidence            367899999999999999999999999875  8888999988764

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>PTZ00184 calmodulin; Provisional

Probab=98.63  E-value=2.4e-07  Score=55.66  Aligned_cols=54  Identities=43%  Similarity=0.631  Sum_probs=49.1

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ..+++++.+.++..|..+|.+++|.|+.++|..+|..+|..++..++..++..+
T Consensus         3 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~   56 (149)
T PTZ00184          3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV   56 (149)
T ss_pred             CccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhc
Confidence            457889999999999999999999999999999999999888888888888754

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.60  E-value=1.4e-07  Score=58.45  Aligned_cols=48  Identities=29%  Similarity=0.411  Sum_probs=44.9

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      .++.+..+|+.||.++.|+|..+.|+.+|..+|.+++.++|+.|++..
T Consensus        99 pe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~  146 (171)
T KOG0031|consen   99 PEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREA  146 (171)
T ss_pred             HHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhC
Confidence            367799999999999999999999999999999999999999998864

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=98.59  E-value=2.9e-07  Score=52.66  Aligned_cols=50  Identities=10%  Similarity=0.131  Sum_probs=41.3

Q ss_pred             HHHHHHHHHhhhhC-CCCCC-cccHHHHHHHHHH-h----CCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFD-TDGSG-TIDAKELNVAMRA-L----GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D-~d~~G-~I~~~el~~~l~~-l----g~~~~~~ei~~li~~~~   86 (87)
                      .-+..++.+|+.|| +|++| +|+..||+.+|+. +    +...+..++++++++++
T Consensus         7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD   63 (93)
T cd05026           7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLD   63 (93)
T ss_pred             HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhC
Confidence            44678899999999 78998 5999999999976 3    33457789999999875

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A

Probab=98.53  E-value=1.5e-07  Score=41.60  Aligned_cols=25  Identities=44%  Similarity=0.787  Sum_probs=22.6

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHH
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAM   66 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l   66 (87)
                      |+++|..+|.|++|.|+.+|+..++
T Consensus         1 l~~~F~~~D~d~DG~is~~E~~~~~   25 (25)
T PF13202_consen    1 LKDAFQQFDTDGDGKISFEEFQRLV   25 (25)
T ss_dssp             HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred             CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence            5789999999999999999999864

...

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.47  E-value=3.5e-07  Score=55.88  Aligned_cols=48  Identities=31%  Similarity=0.477  Sum_probs=44.0

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      -..+++.+.++.||++++|+|...+|+.+|..+|..++++|++.++.-
T Consensus        85 ~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag  132 (152)
T KOG0030|consen   85 GTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAG  132 (152)
T ss_pred             CcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHcc
Confidence            346778999999999999999999999999999999999999999864

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=98.44  E-value=1.2e-06  Score=44.63  Aligned_cols=44  Identities=43%  Similarity=0.718  Sum_probs=40.7

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ++.+|+.+|.+++|.|+.+++..+++.++...+...+..++..+
T Consensus         2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~   45 (63)
T cd00051           2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREV   45 (63)
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence            67889999999999999999999999999999999999888765

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>PTZ00183 centrin; Provisional

Probab=98.37  E-value=2e-06  Score=52.32  Aligned_cols=48  Identities=33%  Similarity=0.485  Sum_probs=43.9

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.+++|+|+..|+..+|..+|..++..++..++..+.
T Consensus        89 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d  136 (158)
T PTZ00183         89 REEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEAD  136 (158)
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            356899999999999999999999999999999999999999998764

>PF14658 EF-hand_9: EF-hand domain

Probab=98.34  E-value=1.2e-06  Score=47.16  Aligned_cols=43  Identities=26%  Similarity=0.313  Sum_probs=40.0

Q ss_pred             HHhhhhCCCCCCcccHHHHHHHHHHhCC-CCCHHHHHHHHHHHh
Q 048414           44 EAFELFDTDGSGTIDAKELNVAMRALGF-EMTEEHGIVLVCTIV   86 (87)
Q Consensus        44 ~~F~~~D~d~~G~I~~~el~~~l~~lg~-~~~~~ei~~li~~~~   86 (87)
                      .+|..||.++.|.|...+|..+|+.+|. .+++.+++.+.++++
T Consensus         2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elD   45 (66)
T PF14658_consen    2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELD   45 (66)
T ss_pred             cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhC
Confidence            3799999999999999999999999998 899999999998875

>PTZ00184 calmodulin; Provisional

Probab=98.29  E-value=3.3e-06  Score=50.62  Aligned_cols=48  Identities=42%  Similarity=0.590  Sum_probs=43.5

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.+++|+|+..++..+|..+|..++.+++..++..++
T Consensus        83 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d  130 (149)
T PTZ00184         83 EEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD  130 (149)
T ss_pred             HHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcC
Confidence            356889999999999999999999999999999999999999988763

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=98.16  E-value=1.4e-05  Score=45.43  Aligned_cols=51  Identities=10%  Similarity=0.046  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHhhh-hCCCCCC-cccHHHHHHHHHHh-----CCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFEL-FDTDGSG-TIDAKELNVAMRAL-----GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~-~D~d~~G-~I~~~el~~~l~~l-----g~~~~~~ei~~li~~~~   86 (87)
                      +..+..|..+|+. +|++++| +|+.+||+.+|...     +...+..+++.+++.++
T Consensus         5 e~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D   62 (89)
T cd05023           5 ERCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLD   62 (89)
T ss_pred             HHHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcC
Confidence            3457789999999 7788876 99999999999875     34567789999998764

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=98.06  E-value=1.4e-05  Score=51.15  Aligned_cols=46  Identities=28%  Similarity=0.452  Sum_probs=37.7

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh-CCCCC--HHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL-GFEMT--EEHGIVLVCTI   85 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-g~~~~--~~ei~~li~~~   85 (87)
                      ++++-+|+.||.+++|+|+.+||..++..+ |...+  .+.+..++..+
T Consensus       104 ~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t  152 (187)
T KOG0034|consen  104 EKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKT  152 (187)
T ss_pred             HHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHH
Confidence            689999999999999999999999999986 55555  66666665544

>smart00054 EFh EF-hand, calcium binding motif

Probab=98.02  E-value=8.5e-06  Score=35.26  Aligned_cols=28  Identities=54%  Similarity=0.894  Sum_probs=25.2

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      +++.+|+.+|.+++|.|+..++..+++.
T Consensus         1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~   28 (29)
T smart00054        1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA   28 (29)
T ss_pred             CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            3678999999999999999999998875

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=98.00  E-value=2.4e-05  Score=55.21  Aligned_cols=52  Identities=21%  Similarity=0.387  Sum_probs=47.7

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      -.+.+.++..+|..+|.++||.|+.+|+...|+.+|.+++.+++..+++.++
T Consensus        77 ~~~~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d  128 (463)
T KOG0036|consen   77 LDNKELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMD  128 (463)
T ss_pred             HHHhHHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhc
Confidence            3566778999999999999999999999999999999999999999988775

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=97.92  E-value=5.7e-05  Score=44.96  Aligned_cols=48  Identities=15%  Similarity=0.084  Sum_probs=38.0

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .......+..+|..+|.|++|+|+.+||..++    .......+..+|+.++
T Consensus        43 ~~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D   90 (116)
T cd00252          43 YPMCKDPVGWMFNQLDGNYDGKLSHHELAPIR----LDPNEHCIKPFFESCD   90 (116)
T ss_pred             hHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH----ccchHHHHHHHHHHHC
Confidence            56677889999999999999999999999876    2334566677776654

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=97.87  E-value=5.6e-05  Score=42.69  Aligned_cols=50  Identities=12%  Similarity=0.102  Sum_probs=41.6

Q ss_pred             HHHHHHHHHhhhhCCC--CCCcccHHHHHHHHH-HhCCCCC----HHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTD--GSGTIDAKELNVAMR-ALGFEMT----EEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d--~~G~I~~~el~~~l~-~lg~~~~----~~ei~~li~~~~   86 (87)
                      .-+..+..+|+.|+..  ++|+|+.+||+.+|. .+|..++    ..+++.++..++
T Consensus         5 ~~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D   61 (88)
T cd05030           5 KAIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLD   61 (88)
T ss_pred             HHHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcC
Confidence            4567889999999965  479999999999997 6676676    899999998764

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=97.80  E-value=6.7e-05  Score=38.26  Aligned_cols=34  Identities=26%  Similarity=0.342  Sum_probs=31.2

Q ss_pred             CCCcccHHHHHHHHHHhCCC-CCHHHHHHHHHHHh
Q 048414           53 GSGTIDAKELNVAMRALGFE-MTEEHGIVLVCTIV   86 (87)
Q Consensus        53 ~~G~I~~~el~~~l~~lg~~-~~~~ei~~li~~~~   86 (87)
                      ++|.|+.++|+.+|..+|.. ++.++++.++..++
T Consensus         1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D   35 (54)
T PF13833_consen    1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFD   35 (54)
T ss_dssp             SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHT
T ss_pred             CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcc
Confidence            47999999999999889999 99999999998875

...

>PLN02964 phosphatidylserine decarboxylase

Probab=97.75  E-value=0.0001  Score=54.75  Aligned_cols=49  Identities=14%  Similarity=0.264  Sum_probs=31.0

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC-CCCCHHH---HHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG-FEMTEEH---GIVLVCTI   85 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg-~~~~~~e---i~~li~~~   85 (87)
                      .++..++++++++|..||.|++|+|    |+.+|+.+| ..+++.+   ++.+++.+
T Consensus       136 ~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~  188 (644)
T PLN02964        136 DFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIV  188 (644)
T ss_pred             hccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHh
Confidence            4556666667777777777766665    666666666 3566555   55665554

>PLN02964 phosphatidylserine decarboxylase

Probab=97.68  E-value=0.00022  Score=53.13  Aligned_cols=53  Identities=13%  Similarity=0.183  Sum_probs=45.8

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++++...+..+|+.+|.|++|.|+.+|+..+|..+|...+++++..+++.++
T Consensus       173 pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fD  225 (644)
T PLN02964        173 PVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAAD  225 (644)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhC
Confidence            44555556999999999999999999999999999988888999999988765

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=97.67  E-value=0.00011  Score=37.42  Aligned_cols=29  Identities=38%  Similarity=0.603  Sum_probs=25.9

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      +++..+|..+|.+++|+|+.+|+..+|..
T Consensus        25 ~e~~~l~~~~D~~~~G~I~~~EF~~~~~~   53 (54)
T PF13833_consen   25 EEVDRLFREFDTDGDGYISFDEFISMMQR   53 (54)
T ss_dssp             HHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence            34889999999999999999999998864

...

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]

Probab=97.47  E-value=0.00015  Score=45.02  Aligned_cols=47  Identities=26%  Similarity=0.458  Sum_probs=39.7

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHhCC-CCCHHHHHHHHHHHhC
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRALGF-EMTEEHGIVLVCTIVE   87 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~-~~~~~ei~~li~~~~e   87 (87)
                      +..-+|++||-|++++|..++|...+..+.. .++.+++..++..++|
T Consensus       109 K~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvie  156 (189)
T KOG0038|consen  109 KAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIE  156 (189)
T ss_pred             hhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Confidence            3566799999999999999999999999853 5899998887777664

>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]

Probab=97.36  E-value=0.00048  Score=55.27  Aligned_cols=59  Identities=22%  Similarity=0.504  Sum_probs=48.4

Q ss_pred             ccccCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCC--HH-----HHHHHHHHH
Q 048414           27 IRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT--EE-----HGIVLVCTI   85 (87)
Q Consensus        27 ~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~--~~-----ei~~li~~~   85 (87)
                      ...+....+++.+.++.-+|+.||++.+|.++..+++.||+++|++++  ++     +++.++..+
T Consensus      2240 qarn~~GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~v 2305 (2399)
T KOG0040|consen 2240 QARNHNGVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLV 2305 (2399)
T ss_pred             HhhccCCCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhc
Confidence            344557789999999999999999999999999999999999999873  22     455555443

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=97.34  E-value=0.00054  Score=36.06  Aligned_cols=29  Identities=38%  Similarity=0.550  Sum_probs=24.8

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHH
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAM   66 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l   66 (87)
                      ..+.+..+|+.+|.|++|.|+.+|+..++
T Consensus        38 ~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen   38 SDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            33567888999999999999999998764

...

>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]

Probab=97.06  E-value=0.0018  Score=47.29  Aligned_cols=53  Identities=25%  Similarity=0.353  Sum_probs=44.4

Q ss_pred             CCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCC---CHHHHHHHHHH
Q 048414           31 HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM---TEEHGIVLVCT   84 (87)
Q Consensus        31 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~---~~~ei~~li~~   84 (87)
                      ...++++++..+++.|..+| +++|+|+..+|..++...+...   ..++++.++..
T Consensus        10 ~~~~tq~El~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~   65 (627)
T KOG0046|consen   10 QSQLTQEELRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGE   65 (627)
T ss_pred             cccccHHHHHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhc
Confidence            36789999999999999999 9999999999999999887543   45666666554

>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A

Probab=97.01  E-value=0.0024  Score=37.34  Aligned_cols=52  Identities=17%  Similarity=0.200  Sum_probs=37.1

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..+++++...+..+|..+|. ++|+|+.++.+.+|..-|  ++.+.+..|+.-++
T Consensus         2 ~~ls~~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~--L~~~~L~~IW~LaD   53 (104)
T PF12763_consen    2 PKLSPEEKQKYDQIFQSLDP-QDGKISGDQAREFFMKSG--LPRDVLAQIWNLAD   53 (104)
T ss_dssp             ---SCCHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHTT--SSHHHHHHHHHHH-
T ss_pred             CCCCHHHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHhhhc
Confidence            35677788888888888875 578888888888887665  56677777776554

...

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=96.98  E-value=0.0043  Score=40.64  Aligned_cols=49  Identities=24%  Similarity=0.224  Sum_probs=41.2

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALG-FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg-~~~~~~ei~~li~~~~   86 (87)
                      ....+...|...|+|+.|.|+.+||..+|...+ ..++.+.++-||...+
T Consensus        55 ~~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd  104 (221)
T KOG0037|consen   55 TFPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFD  104 (221)
T ss_pred             ccHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhc
Confidence            345689999999999999999999999998664 4688889998887543

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=96.86  E-value=0.00091  Score=43.11  Aligned_cols=31  Identities=35%  Similarity=0.631  Sum_probs=25.7

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .+.++-+|+.||.|++|+|+.+|+-.++.++
T Consensus        99 eekl~w~F~lyD~dgdG~It~~Eml~iv~~i  129 (193)
T KOG0044|consen   99 EEKLKWAFRLYDLDGDGYITKEEMLKIVQAI  129 (193)
T ss_pred             HHHhhhhheeecCCCCceEcHHHHHHHHHHH
Confidence            4456677999999999999999988877764

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=96.67  E-value=0.0039  Score=35.43  Aligned_cols=32  Identities=19%  Similarity=0.277  Sum_probs=27.9

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      ..++..+++.+|.|++|.|+.+|+..++..+.
T Consensus        52 ~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~   83 (93)
T cd05026          52 PMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT   83 (93)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence            35688899999999999999999999887763

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=96.63  E-value=0.0044  Score=35.18  Aligned_cols=31  Identities=13%  Similarity=0.259  Sum_probs=27.7

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      +++.++|+.+|.|++|.|+.+|+..++..+.
T Consensus        47 ~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~   77 (89)
T cd05022          47 EGLEEKMKNLDVNQDSKLSFEEFWELIGELA   77 (89)
T ss_pred             HHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence            6789999999999999999999999887653

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.55  E-value=0.0061  Score=45.05  Aligned_cols=60  Identities=12%  Similarity=0.044  Sum_probs=53.6

Q ss_pred             cccCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHhC
Q 048414           28 RGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIVE   87 (87)
Q Consensus        28 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~e   87 (87)
                      ......++.++...++.-|..+|.|+.|+++..++..+|+..+.+++.+.++++++++++
T Consensus       581 ~~~~i~~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~  640 (680)
T KOG0042|consen  581 MSIPIKLTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADE  640 (680)
T ss_pred             cccccccCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence            334467899999999999999999999999999999999999989999999999888763

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=96.55  E-value=0.011  Score=42.07  Aligned_cols=53  Identities=17%  Similarity=0.316  Sum_probs=42.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC-CCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE-MTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~-~~~~ei~~li~~   84 (87)
                      ....++....++..|+.||.+++|.|+..+|...|..++.. ...+-...++..
T Consensus         6 ~~~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~   59 (463)
T KOG0036|consen    6 RETDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSA   59 (463)
T ss_pred             cCCcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHh
Confidence            35667777889999999999999999999999999998766 444444555544

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=96.39  E-value=0.0085  Score=33.84  Aligned_cols=31  Identities=23%  Similarity=0.297  Sum_probs=26.2

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      +++.++|+.+|.|++|.|+.+|+..++..+.
T Consensus        51 ~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~   81 (88)
T cd05029          51 AEIAKLMEDLDRNKDQEVNFQEYVTFLGALA   81 (88)
T ss_pred             HHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence            4567778999999999999999998887653

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=96.37  E-value=0.0033  Score=35.61  Aligned_cols=33  Identities=12%  Similarity=0.290  Sum_probs=28.6

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGF   71 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~   71 (87)
                      .+++..+|+.+|.+++|.|+.+++..++..+++
T Consensus        50 ~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~   82 (94)
T cd05031          50 PMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI   82 (94)
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence            346888899999999999999999999887664

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=96.36  E-value=0.0075  Score=34.16  Aligned_cols=32  Identities=16%  Similarity=0.290  Sum_probs=27.3

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      ..++..+|+.+|.|++|.|+.+|+..++..+.
T Consensus        51 ~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~   82 (89)
T cd05023          51 PGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA   82 (89)
T ss_pred             HHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence            35677889999999999999999998887653

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=96.30  E-value=0.0095  Score=33.50  Aligned_cols=32  Identities=28%  Similarity=0.482  Sum_probs=27.7

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      ..++..+|+.+|.+++|.|+.+++..++..+.
T Consensus        50 ~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~   81 (88)
T cd05030          50 QKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVG   81 (88)
T ss_pred             HHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence            46688899999999999999999999887653

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=96.25  E-value=0.0083  Score=35.69  Aligned_cols=26  Identities=35%  Similarity=0.394  Sum_probs=23.5

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHH
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAM   66 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l   66 (87)
                      .+...|..+|.|++|.|+.+|+..+|
T Consensus        81 ~~~~f~~~~D~n~Dg~IS~~Ef~~cl  106 (116)
T cd00252          81 CIKPFFESCDLDKDGSISLDEWCYCF  106 (116)
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            34678999999999999999999988

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=96.15  E-value=0.013  Score=32.95  Aligned_cols=32  Identities=25%  Similarity=0.478  Sum_probs=27.5

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      ..++..+|+.+|.+++|.|+.+++..++..+.
T Consensus        51 ~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~   82 (92)
T cd05025          51 ADAVDKIMKELDENGDGEVDFQEFVVLVAALT   82 (92)
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence            35688899999999999999999999887653

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=96.10  E-value=0.019  Score=41.57  Aligned_cols=45  Identities=22%  Similarity=0.431  Sum_probs=36.0

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHh----CCCCCHHHHHHHHHHH
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRAL----GFEMTEEHGIVLVCTI   85 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l----g~~~~~~ei~~li~~~   85 (87)
                      .|..+|+.+|.|++|.|+.+|++.+.+-+    ...++.++|.++-+.+
T Consensus       548 ~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~m  596 (631)
T KOG0377|consen  548 SLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSM  596 (631)
T ss_pred             hHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhh
Confidence            47789999999999999999999877655    4467777777765544

>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A

Probab=95.96  E-value=0.024  Score=29.00  Aligned_cols=29  Identities=21%  Similarity=0.382  Sum_probs=24.7

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      -...+|+..|++++|.+..+|+..+++.|
T Consensus        22 yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L   50 (51)
T PF14788_consen   22 YARQLFQECDKSQSGRLEGEEFEEFYKRL   50 (51)
T ss_dssp             HHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred             HHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence            45678999999999999999999988765

...

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=95.93  E-value=0.021  Score=29.59  Aligned_cols=31  Identities=29%  Similarity=0.602  Sum_probs=26.2

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .+.+..+|+.+|.+++|.|+.+++..++..+
T Consensus        32 ~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~   62 (67)
T cd00052          32 RSVLAQIWDLADTDKDGKLDKEEFAIAMHLI   62 (67)
T ss_pred             HHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            3457888999999999999999998887654

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10

Probab=95.88  E-value=0.095  Score=29.96  Aligned_cols=50  Identities=8%  Similarity=0.092  Sum_probs=38.4

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH-h----CCCCCHHHHHHHHHHHhC
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRA-L----GFEMTEEHGIVLVCTIVE   87 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-l----g~~~~~~ei~~li~~~~e   87 (87)
                      .-+..+..+|+.|-. +.|.++..||+.+|.. +    +-.-.+..|+.+++.++.
T Consensus         5 ~ai~~lI~~FhkYaG-~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~   59 (91)
T cd05024           5 HSMEKMMLTFHKFAG-EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDD   59 (91)
T ss_pred             HHHHHHHHHHHHHcC-CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCC
Confidence            346778999999984 4579999999999874 2    334467889999988763

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>smart00027 EH Eps15 homology domain

Probab=95.83  E-value=0.025  Score=32.03  Aligned_cols=37  Identities=24%  Similarity=0.541  Sum_probs=29.3

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh-----CCCCCHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL-----GFEMTEE   76 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-----g~~~~~~   76 (87)
                      +++..+|..+|.+++|+|+.+++..++..+     |.+++.+
T Consensus        44 ~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~~~g~~~~~~   85 (96)
T smart00027       44 TLLAKIWNLADIDNDGELDKDEFALAMHLIYRKLNGYPIPAS   85 (96)
T ss_pred             HHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHHHcCCCCCcc
Confidence            357788999999999999999999877753     6665543

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=95.70  E-value=0.023  Score=28.15  Aligned_cols=28  Identities=39%  Similarity=0.564  Sum_probs=23.6

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAM   66 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l   66 (87)
                      .+.+..+|..+|.+++|.|+.+++..++
T Consensus        35 ~~~~~~~~~~~~~~~~~~l~~~ef~~~~   62 (63)
T cd00051          35 EEEIDEMIREVDKDGDGKIDFEEFLELM   62 (63)
T ss_pred             HHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence            3457778999999999999999998765

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional

Probab=95.54  E-value=0.032  Score=39.61  Aligned_cols=47  Identities=28%  Similarity=0.388  Sum_probs=32.5

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHH---HHHHHhCC----CCCHHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELN---VAMRALGF----EMTEEHGIVLVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~---~~l~~lg~----~~~~~ei~~li~~~   85 (87)
                      ...++.+|+.||.+++|+|+.+|+.   .++..+..    .++.+++..++..+
T Consensus       333 ~~~l~~aF~~~D~dgdG~Is~~E~~~~~~~F~~~D~d~DG~Is~eEf~~~~~~~  386 (391)
T PRK12309        333 THAAQEIFRLYDLDGDGFITREEWLGSDAVFDALDLNHDGKITPEEMRAGLGAA  386 (391)
T ss_pred             hHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            3467888999999999999999874   34444421    36677776666544

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=95.53  E-value=0.035  Score=31.27  Aligned_cols=31  Identities=23%  Similarity=0.460  Sum_probs=26.3

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .+++..+++.+|.|++|.|+.+++..++..+
T Consensus        50 ~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~   80 (88)
T cd05027          50 QEVVDKVMETLDSDGDGECDFQEFMAFVAMV   80 (88)
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            3457888889999999999999999888764

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional

Probab=95.52  E-value=0.066  Score=38.05  Aligned_cols=37  Identities=16%  Similarity=0.307  Sum_probs=31.3

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      ..++.++......+|..+|.|++|.|+.+|+..+++.
T Consensus       349 G~Is~~E~~~~~~~F~~~D~d~DG~Is~eEf~~~~~~  385 (391)
T PRK12309        349 GFITREEWLGSDAVFDALDLNHDGKITPEEMRAGLGA  385 (391)
T ss_pred             CcCcHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            3566776655688999999999999999999998875

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=95.48  E-value=0.065  Score=34.42  Aligned_cols=46  Identities=17%  Similarity=0.287  Sum_probs=37.3

Q ss_pred             CCCCHHHHHHHHHHhhhhCCC-CCCcccHHHHHHHHHHhCCCCCHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTD-GSGTIDAKELNVAMRALGFEMTEEHG   78 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d-~~G~I~~~el~~~l~~lg~~~~~~ei   78 (87)
                      ..++..+++.|...|..+|.+ ++|+|+.+|+..+. .+..++=.+.|
T Consensus        25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~Np~~~rI   71 (187)
T KOG0034|consen   25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIP-ELALNPLADRI   71 (187)
T ss_pred             cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHH-HHhcCcHHHHH
Confidence            348899999999999999999 99999999999988 44444433333

>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C

Probab=95.48  E-value=0.099  Score=28.71  Aligned_cols=43  Identities=26%  Similarity=0.393  Sum_probs=35.4

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHh-CC-CCCHHHHHHHHHH
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRAL-GF-EMTEEHGIVLVCT   84 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l-g~-~~~~~ei~~li~~   84 (87)
                      ++..+|..|-. +.+.++.++|...|+.- |. .++.+++..+|..
T Consensus         1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~   45 (83)
T PF09279_consen    1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEK   45 (83)
T ss_dssp             HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHH
T ss_pred             CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHH
Confidence            47889999955 78999999999999865 43 4689999999875

It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=95.42  E-value=0.04  Score=30.57  Aligned_cols=31  Identities=19%  Similarity=0.386  Sum_probs=26.7

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ..++..+|..+|.+++|.|+.+++..++..+
T Consensus        50 ~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~   80 (88)
T cd00213          50 PEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL   80 (88)
T ss_pred             HHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence            3457888999999999999999999988765

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10

Probab=95.22  E-value=0.045  Score=31.27  Aligned_cols=32  Identities=9%  Similarity=0.129  Sum_probs=27.5

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      ...+.++|+.+|.|+||.|+.+|+..++..+.
T Consensus        47 ~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~   78 (91)
T cd05024          47 PMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLL   78 (91)
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            44578899999999999999999998887653

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes

Probab=93.97  E-value=0.077  Score=28.80  Aligned_cols=27  Identities=19%  Similarity=0.478  Sum_probs=23.4

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAM   66 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l   66 (87)
                      -+++..+|+.+ .++.++|+..||+..|
T Consensus         5 ~eqv~~aFr~l-A~~KpyVT~~dLr~~l   31 (69)
T PF08726_consen    5 AEQVEEAFRAL-AGGKPYVTEEDLRRSL   31 (69)
T ss_dssp             CHHHHHHHHHH-CTSSSCEEHHHHHHHS
T ss_pred             HHHHHHHHHHH-HcCCCcccHHHHHHHc
Confidence            35789999999 7788999999999875

EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=93.82  E-value=0.17  Score=32.74  Aligned_cols=32  Identities=28%  Similarity=0.360  Sum_probs=24.4

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ...-...+|+.||.|++|+|+..|+..+|..+
T Consensus        62 ~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~   93 (193)
T KOG0044|consen   62 ASKYAELVFRTFDKNKDGTIDFLEFICALSLT   93 (193)
T ss_pred             HHHHHHHHHHHhcccCCCCcCHHHHHHHHHHH
Confidence            34446778899999999999999977766543

>PF14658 EF-hand_9: EF-hand domain

Probab=93.53  E-value=0.18  Score=27.15  Aligned_cols=30  Identities=20%  Similarity=0.493  Sum_probs=26.3

Q ss_pred             HHHHHHHhhhhCCCCC-CcccHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGS-GTIDAKELNVAMRA   68 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~   68 (87)
                      ..+|+...+.+|+++. |.|+.+++..+|+.
T Consensus        34 e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~   64 (66)
T PF14658_consen   34 ESELQDLINELDPEGRDGSVNFDTFLAIMRD   64 (66)
T ss_pred             HHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence            3478888999999998 99999999999875

>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A

Probab=93.50  E-value=0.16  Score=29.61  Aligned_cols=39  Identities=26%  Similarity=0.440  Sum_probs=29.4

Q ss_pred             cccCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           28 RGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        28 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ......++.   +.|..++...|.+++|+++.+|+.-+|.-+
T Consensus        34 ~f~~S~L~~---~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li   72 (104)
T PF12763_consen   34 FFMKSGLPR---DVLAQIWNLADIDNDGKLDFEEFAIAMHLI   72 (104)
T ss_dssp             HHHHTTSSH---HHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred             HHHHcCCCH---HHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence            344466765   457888899999999999999999877643

...

>KOG3449 consensus 60S acidic ribosomal protein P2 [Translation, ribosomal structure and biogenesis]

Probab=93.46  E-value=0.39  Score=28.33  Aligned_cols=44  Identities=16%  Similarity=0.289  Sum_probs=37.9

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      +..+|=+++.-++-.-+..++..+|..+|.....+.++.+|.++
T Consensus         3 yvaAYLL~~lgGn~~psa~DikkIl~sVG~E~d~e~i~~visel   46 (112)
T KOG3449|consen    3 YVAAYLLAVLGGNASPSASDIKKILESVGAEIDDERINLVLSEL   46 (112)
T ss_pred             HHHHHHHHHhcCCCCCCHHHHHHHHHHhCcccCHHHHHHHHHHh
Confidence            45567777888888899999999999999999999999998765

>KOG2871 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.34  E-value=0.11  Score=36.76  Aligned_cols=43  Identities=21%  Similarity=0.422  Sum_probs=35.0

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVL   81 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~l   81 (87)
                      .+.++++|+.+|+.++|+|+.+-++.+|..++..+++.+.-.+
T Consensus       308 s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~~vse~a~v~l  350 (449)
T KOG2871|consen  308 SEQLRRNFHAYDPEDNNFISCSGLQIVMTALNRLVSEPAYVML  350 (449)
T ss_pred             CHHHHhhhhccCccCCCeeecHHHHHHHHHhcccccCHHHHHH
Confidence            5679999999999999999999999999988855555443333

>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A

Probab=93.23  E-value=0.29  Score=25.01  Aligned_cols=31  Identities=19%  Similarity=0.244  Sum_probs=23.0

Q ss_pred             cccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           56 TIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        56 ~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +++..|++.+|+.+++.+++.-+..+++..+
T Consensus         1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D   31 (51)
T PF14788_consen    1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECD   31 (51)
T ss_dssp             EBEHHHHHHHHHHTT----HHHHHHHHHHH-
T ss_pred             CCCHHHHHHHHHHHccCcCHHHHHHHHHHhc
Confidence            3678899999999999999999999998875

...

>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised

Probab=93.18  E-value=0.3  Score=26.15  Aligned_cols=30  Identities=17%  Similarity=0.257  Sum_probs=28.0

Q ss_pred             cccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           56 TIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        56 ~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      -|+.+-++.++..+|.++++..|.++++.+
T Consensus        31 pine~mir~M~~QMG~kpSekqi~Q~m~~m   60 (64)
T PF03672_consen   31 PINEKMIRAMMMQMGRKPSEKQIKQMMRSM   60 (64)
T ss_pred             CCCHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence            699999999999999999999999998865

>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]

Probab=92.90  E-value=0.057  Score=38.91  Aligned_cols=28  Identities=36%  Similarity=0.744  Sum_probs=24.2

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      ..++-+|++||.|++|-|+.+|+..+..
T Consensus       233 ~~F~IAFKMFD~dgnG~IdkeEF~~v~~  260 (489)
T KOG2643|consen  233 RNFRIAFKMFDLDGNGEIDKEEFETVQQ  260 (489)
T ss_pred             ccceeeeeeeecCCCCcccHHHHHHHHH
Confidence            3467789999999999999999987763

>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.38  E-value=0.75  Score=25.02  Aligned_cols=42  Identities=14%  Similarity=0.202  Sum_probs=33.3

Q ss_pred             HHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           44 EAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        44 ~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +.|..+=+|+ =-|+.+-++.++..+|.++++..|+++++.+.
T Consensus        27 k~~~k~lk~N-Ppine~~iR~M~~qmGqKpSe~kI~Qvm~~i~   68 (71)
T COG3763          27 KQMKKQLKDN-PPINEEMIRMMMAQMGQKPSEKKINQVMRSII   68 (71)
T ss_pred             HHHHHHHhhC-CCCCHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence            3344443443 36999999999999999999999999998764

>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]

Probab=92.13  E-value=0.5  Score=36.89  Aligned_cols=44  Identities=25%  Similarity=0.308  Sum_probs=40.3

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE   75 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~   75 (87)
                      ...++....+|+..|+.+|+...|..+.+++..+|..+|.+...
T Consensus       739 k~~sQ~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~  782 (890)
T KOG0035|consen  739 KGTSQYVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEE  782 (890)
T ss_pred             cchhHHHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccch
Confidence            45778889999999999999999999999999999999988765

>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]

Probab=91.63  E-value=0.48  Score=35.46  Aligned_cols=39  Identities=26%  Similarity=0.378  Sum_probs=36.1

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      ..++..-...+..+|..||.|+||-++..||..++...+
T Consensus       307 ~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P  345 (625)
T KOG1707|consen  307 VELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAP  345 (625)
T ss_pred             eeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCC
Confidence            678888899999999999999999999999999998764

>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin

Probab=91.58  E-value=0.3  Score=31.08  Aligned_cols=36  Identities=28%  Similarity=0.445  Sum_probs=30.6

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE   75 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~   75 (87)
                      ..|++=..-||+|+||.|...|--..++.+|+++--
T Consensus         7 T~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~   42 (174)
T PF05042_consen    7 TVLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILL   42 (174)
T ss_pred             cHHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHH
Confidence            346677778999999999999999999999987643

Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.

>PRK00523 hypothetical protein; Provisional

Probab=91.37  E-value=0.9  Score=24.85  Aligned_cols=41  Identities=10%  Similarity=0.116  Sum_probs=31.9

Q ss_pred             HHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           44 EAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        44 ~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      +.|..+=+++ =-|+.+-++.++..+|.++++..++++++.+
T Consensus        28 k~~~k~l~~N-Ppine~mir~M~~QMGqKPSekki~Q~m~~m   68 (72)
T PRK00523         28 KMFKKQIREN-PPITENMIRAMYMQMGRKPSESQIKQVMRSV   68 (72)
T ss_pred             HHHHHHHHHC-cCCCHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence            3344443333 3699999999999999999999999998765

>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]

Probab=91.36  E-value=1.1  Score=33.71  Aligned_cols=53  Identities=17%  Similarity=0.241  Sum_probs=42.7

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH-hCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRA-LGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-lg~~~~~~ei~~li~~   84 (87)
                      ..+...-...|..+|+..|.|++|.++..||..+=+. ++-++...+++.+...
T Consensus       187 qelkp~~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~v  240 (625)
T KOG1707|consen  187 QELKPRCVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNV  240 (625)
T ss_pred             ccccHHHHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHH
Confidence            5677788899999999999999999999999876443 5777887777665443

>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]

Probab=91.30  E-value=0.096  Score=37.79  Aligned_cols=27  Identities=30%  Similarity=0.620  Sum_probs=24.4

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      +--+|++||.|+||.++.+|+-.+|+.
T Consensus       427 vdvvF~IFD~N~Dg~LS~~EFl~Vmk~  453 (489)
T KOG2643|consen  427 VDVVFTIFDENNDGTLSHKEFLAVMKR  453 (489)
T ss_pred             eeeEEEEEccCCCCcccHHHHHHHHHH
Confidence            455799999999999999999999986

>PTZ00373 60S Acidic ribosomal protein P2; Provisional

Probab=90.82  E-value=1.3  Score=26.29  Aligned_cols=44  Identities=11%  Similarity=0.134  Sum_probs=35.1

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      +..+|-..-.-++..++.+++..+|+..|..+....+..+++.+
T Consensus         5 yvaAYlL~~lgG~~~pTaddI~kIL~AaGveVd~~~~~l~~~~L   48 (112)
T PTZ00373          5 YVAAYLMCVLGGNENPTKKEVKNVLSAVNADVEDDVLDNFFKSL   48 (112)
T ss_pred             HHHHHHHHHHcCCCCCCHHHHHHHHHHcCCCccHHHHHHHHHHH
Confidence            34455556666777899999999999999999998888887664

>PRK01844 hypothetical protein; Provisional

Probab=90.04  E-value=1.4  Score=24.15  Aligned_cols=30  Identities=13%  Similarity=0.261  Sum_probs=27.7

Q ss_pred             cccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           56 TIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        56 ~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      -|+.+-++..+..+|.++++..++++++.+
T Consensus        38 pine~mir~Mm~QMGqkPSekki~Q~m~~m   67 (72)
T PRK01844         38 PINEQMLKMMMMQMGQKPSQKKINQMMSAM   67 (72)
T ss_pred             CCCHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence            699999999999999999999999998764

>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins

Probab=89.89  E-value=0.077  Score=31.33  Aligned_cols=34  Identities=26%  Similarity=0.371  Sum_probs=22.9

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ......+.-.|..+|.|++|.++..||..+...+
T Consensus        50 ~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l   83 (113)
T PF10591_consen   50 SECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL   83 (113)
T ss_dssp             GGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT
T ss_pred             hhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH
Confidence            3445567777999999999999999998765533

SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.

>KOG4065 consensus Uncharacterized conserved protein [Function unknown]

Probab=89.28  E-value=1.2  Score=26.84  Aligned_cols=53  Identities=21%  Similarity=0.245  Sum_probs=38.4

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh------CC---C-CCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL------GF---E-MTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l------g~---~-~~~~ei~~li~~~~   86 (87)
                      .+++++++.  --.|++.|-|++|+++.-||..++.-.      |.   + .++.|+..||..+.
T Consensus        61 a~mtpeqlq--fHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL  123 (144)
T KOG4065|consen   61 AKMTPEQLQ--FHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVL  123 (144)
T ss_pred             hhCCHHHHh--hhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHh
Confidence            356655542  245889999999999999999887643      32   1 46788999988764

>cd05833 Ribosomal_P2 Ribosomal protein P2

Probab=89.08  E-value=2.1  Score=25.18  Aligned_cols=44  Identities=16%  Similarity=0.262  Sum_probs=34.3

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      +..+|-++-..++..|+.+++..+|+..|..+....+..+++.+
T Consensus         3 yvaAylL~~l~g~~~pTa~dI~~IL~AaGveVe~~~~~lf~~~L   46 (109)
T cd05833           3 YVAAYLLAVLGGNASPSAADVKKILGSVGVEVDDEKLNKVISEL   46 (109)
T ss_pred             HHHHHHHHHHcCCCCCCHHHHHHHHHHcCCCccHHHHHHHHHHH
Confidence            34455566666777899999999999999998888877776654

This subfamily represents the eukaryotic large ribosomal protein P2. Eukaryotic P1 and P2 are functionally equivalent to the bacterial protein L7/L12, but are not homologous to L7/L12. P2 is located in the L12 stalk, with proteins P1, P0, L11, and 28S rRNA. P1 and P2 are the only proteins in the ribosome to occur as multimers, always appearing as sets of heterodimers. Recent data indicate that eukaryotes have four copies (two heterodimers), while most archaeal species contain six copies of L12p (three homodimers). Bacteria may have four or six copies of L7/L12 (two or three homodimers) depending on the species. Experiments using S. cerevisiae P1 and P2 indicate that P1 proteins are positioned more internally with limited reactivity in the C-terminal domains, while P2 proteins seem to be more externally located and are more likely to interact with other cellular components. In lower eukaryotes, P1 and P2 are further subdivided into P1A, P1B, P2

>PF00046 Homeobox: Homeobox domain not present here

Probab=89.07  E-value=1.8  Score=21.70  Aligned_cols=46  Identities=15%  Similarity=0.176  Sum_probs=38.1

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.++...|...|..     +.+++..+...+-..+|  ++...|...|..
T Consensus         5 ~~~t~~q~~~L~~~f~~-----~~~p~~~~~~~la~~l~--l~~~~V~~WF~n   50 (57)
T PF00046_consen    5 TRFTKEQLKVLEEYFQE-----NPYPSKEEREELAKELG--LTERQVKNWFQN   50 (57)
T ss_dssp             SSSSHHHHHHHHHHHHH-----SSSCHHHHHHHHHHHHT--SSHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH-----hcccccccccccccccc--ccccccccCHHH
Confidence            56889999999999984     57899999999888886  577888887753

; InterPro: IPR001356 The homeobox domain was first identified in a number of drosophila homeotic and segmentation proteins, but is now known to be well-conserved in many other animals, including vertebrates [, , ]. Hox genes encode homeodomain-containing transcriptional regulators that operate differential genetic programs along the anterior-posterior axis of animal bodies []. The domain binds DNA through a helix-turn-helix (HTH) structure. The HTH motif is characterised by two alpha-helices, which make intimate contacts with the DNA and are joined by a short turn. The second helix binds to DNA via a number of hydrogen bonds and hydrophobic interactions, which occur between specific side chains and the exposed bases and thymine methyl groups within the major groove of the DNA []. The first helix helps to stabilise the structure. The motif is very similar in sequence and structure in a wide range of DNA-binding proteins (e.g., cro and repressor proteins, homeotic proteins, etc.). One of the principal differences between HTH motifs in these different proteins arises from the stereo-chemical requirement for glycine in the turn which is needed to avoid steric interference of the beta-carbon with the main chain: for cro and repressor proteins the glycine appears to be mandatory, while for many of the homeotic and other DNA-binding proteins the requirement is relaxed.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2DA3_A 1LFB_A 2LFB_A 2ECB_A 2DA5_A 3D1N_O 3A03_A 2XSD_C 3CMY_A 1AHD_P ....

>cd00086 homeodomain Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner

Probab=89.07  E-value=1.8  Score=21.62  Aligned_cols=46  Identities=17%  Similarity=0.259  Sum_probs=38.5

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.++...|...|..     +.+.+..++..+...+|  ++..+|...|..
T Consensus         5 ~~~~~~~~~~Le~~f~~-----~~~P~~~~~~~la~~~~--l~~~qV~~WF~n   50 (59)
T cd00086           5 TRFTPEQLEELEKEFEK-----NPYPSREEREELAKELG--LTERQVKIWFQN   50 (59)
T ss_pred             CcCCHHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHC--cCHHHHHHHHHH
Confidence            46788899999999987     56899999999988887  677888887764

>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions

Probab=88.57  E-value=1.3  Score=25.26  Aligned_cols=29  Identities=21%  Similarity=0.532  Sum_probs=22.0

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      .++++-+|+.+ .|++|.++...|..+|+.
T Consensus         2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d   30 (90)
T PF09069_consen    2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHD   30 (90)
T ss_dssp             HHHHHHHHHHH-S-TTS-B-HHHHHHHHHH
T ss_pred             hHHHHHHHHHH-cCCCCCCcHHHHHHHHHH
Confidence            46799999999 788899999998887764

The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.

>PF06648 DUF1160: Protein of unknown function (DUF1160); InterPro: IPR010594 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf75; it is a family of uncharacterised viral proteins

Probab=88.30  E-value=1.7  Score=26.19  Aligned_cols=44  Identities=16%  Similarity=0.286  Sum_probs=37.2

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL-GFEMTEEHGIVLVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-g~~~~~~ei~~li~~~   85 (87)
                      .++|..+|++|-.   +.|+.+.+..++... |..+|..+++-+...+
T Consensus        36 ~~Kl~~Il~mFl~---~eid~e~~y~l~~~~d~~~LT~~Qi~Yl~~~~   80 (122)
T PF06648_consen   36 LDKLIKILKMFLN---DEIDVEDMYNLFGAVDGLKLTRSQIDYLYNRV   80 (122)
T ss_pred             HHHHHHHHHHHHh---CCCCHHHHHHHHhcccHhhcCHHHHHHHHHHH
Confidence            4689999999976   679999999999987 6899999988776654

>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]

Probab=87.85  E-value=1  Score=18.75  Aligned_cols=16  Identities=31%  Similarity=0.694  Sum_probs=12.5

Q ss_pred             CCCCCCcccHHHHHHH
Q 048414           50 DTDGSGTIDAKELNVA   65 (87)
Q Consensus        50 D~d~~G~I~~~el~~~   65 (87)
                      |.|++|.|+.-|+..+
T Consensus         1 DvN~DG~vna~D~~~l   16 (21)
T PF00404_consen    1 DVNGDGKVNAIDLALL   16 (21)
T ss_dssp             -TTSSSSSSHHHHHHH
T ss_pred             CCCCCCcCCHHHHHHH
Confidence            6799999999887643

The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.

>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []

Probab=87.73  E-value=2.1  Score=20.96  Aligned_cols=32  Identities=19%  Similarity=0.341  Sum_probs=25.0

Q ss_pred             HHHHHHHHHhhhhC-C-CCCCcccHHHHHHHHHH
Q 048414           37 QKKQEIKEAFELFD-T-DGSGTIDAKELNVAMRA   68 (87)
Q Consensus        37 ~~~~~l~~~F~~~D-~-d~~G~I~~~el~~~l~~   68 (87)
                      ..+..+..+|+.|- + ....+++..||+.+|..
T Consensus         3 ~ai~~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~   36 (44)
T PF01023_consen    3 KAIETIIDVFHKYAGKEGDKDTLSKKELKELLEK   36 (44)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCCeEcHHHHHHHHHH
Confidence            34677899999995 2 34578999999999874

S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=87.20  E-value=0.93  Score=31.55  Aligned_cols=33  Identities=15%  Similarity=0.327  Sum_probs=27.7

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      .+..+.+..+|..+|.+++|+|+.++|..-+..
T Consensus        73 ee~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~  105 (325)
T KOG4223|consen   73 EESQERLGKLVPKIDSDSDGFVTESELKAWIMQ  105 (325)
T ss_pred             chhHHHHHHHHhhhcCCCCCceeHHHHHHHHHH
Confidence            345678999999999999999999999975543

>KOG4251 consensus Calcium binding protein [General function prediction only]

Probab=86.74  E-value=1.4  Score=30.02  Aligned_cols=29  Identities=21%  Similarity=0.334  Sum_probs=24.4

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHH
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAM   66 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l   66 (87)
                      ....+..+|+..|.|.+|+|++.|++.-+
T Consensus        99 srrklmviFsKvDVNtDrkisAkEmqrwI  127 (362)
T KOG4251|consen   99 SRRKLMVIFSKVDVNTDRKISAKEMQRWI  127 (362)
T ss_pred             HHHHHHHHHhhcccCccccccHHHHHHHH
Confidence            45678899999999999999999988644

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=86.70  E-value=0.63  Score=32.34  Aligned_cols=43  Identities=19%  Similarity=0.188  Sum_probs=31.6

Q ss_pred             HHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           44 EAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        44 ~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..|..+|+|++|+++.+||+.-+---+......+.+-|+-+++
T Consensus       245 ~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD  287 (325)
T KOG4223|consen  245 QFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEAD  287 (325)
T ss_pred             HHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhc
Confidence            5577789999999999999965543455556667777776654

>COG2818 Tag 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]

Probab=86.65  E-value=0.75  Score=29.64  Aligned_cols=49  Identities=14%  Similarity=0.267  Sum_probs=41.0

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ...+.++++|..||.++--..+.+++..+|..-|+--....|+.+|..+
T Consensus        52 ~KRe~freaF~~Fd~~kVA~~~~~dverLl~d~gIIR~r~KI~A~i~NA  100 (188)
T COG2818          52 KKREAFREAFHGFDPEKVAAMTEEDVERLLADAGIIRNRGKIKATINNA  100 (188)
T ss_pred             HhHHHHHHHHhcCCHHHHHcCCHHHHHHHHhCcchhhhHHHHHHHHHHH
Confidence            4456799999999999988999999999999888877777777777654

>PLN00138 large subunit ribosomal protein LP2; Provisional

Probab=85.27  E-value=4.7  Score=23.93  Aligned_cols=41  Identities=17%  Similarity=0.278  Sum_probs=31.1

Q ss_pred             HhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           45 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        45 ~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      +|-+.--.++-.++.+++..+|...|..+....+..+++.+
T Consensus         6 Ayll~~l~g~~~pta~dI~~IL~AaGvevd~~~~~~f~~~L   46 (113)
T PLN00138          6 AYLLAVLGGNTCPSAEDLKDILGSVGADADDDRIELLLSEV   46 (113)
T ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHH
Confidence            34444445566799999999999999988888887777654

>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins

Probab=84.99  E-value=1.3  Score=26.13  Aligned_cols=24  Identities=21%  Similarity=0.228  Sum_probs=18.9

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHH
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNV   64 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~   64 (87)
                      .++..|+..|.|++|.|+..|...
T Consensus        89 C~~~F~~~CD~n~d~~Is~~EW~~  112 (113)
T PF10591_consen   89 CARPFFRSCDVNKDGKISLDEWCN  112 (113)
T ss_dssp             GHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCCCHHHHcc
Confidence            477789999999999999998764

SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.

>PF13551 HTH_29: Winged helix-turn helix

Probab=83.89  E-value=5.7  Score=22.30  Aligned_cols=52  Identities=13%  Similarity=0.217  Sum_probs=42.3

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHH-H-HhCCCCCHHHHHHHHHHH
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAM-R-ALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l-~-~lg~~~~~~ei~~li~~~   85 (87)
                      +++++.+.+.+.+.....++.+..+...+...| . ..|..++...|..++..+
T Consensus        58 l~~~~~~~l~~~~~~~p~~g~~~~t~~~l~~~l~~~~~~~~~s~~ti~r~L~~~  111 (112)
T PF13551_consen   58 LSEEQRAQLIELLRENPPEGRSRWTLEELAEWLIEEEFGIDVSPSTIRRILKRA  111 (112)
T ss_pred             CCHHHHHHHHHHHHHCCCCCCCcccHHHHHHHHHHhccCccCCHHHHHHHHHHC
Confidence            899999999999987766644578999999854 3 468899999999998764

>cd04411 Ribosomal_P1_P2_L12p Ribosomal protein P1, P2, and L12p

Probab=83.45  E-value=6.9  Score=22.87  Aligned_cols=29  Identities=14%  Similarity=0.306  Sum_probs=25.8

Q ss_pred             ccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           57 IDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        57 I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      |+.+++..+|...|..++...+..+++.+
T Consensus        17 ~ta~~I~~IL~aaGveVe~~~~~~~~~aL   45 (105)
T cd04411          17 LTEDKIKELLSAAGAEIEPERVKLFLSAL   45 (105)
T ss_pred             CCHHHHHHHHHHcCCCcCHHHHHHHHHHH
Confidence            99999999999999999998888887663

Ribosomal proteins P1 and P2 are the eukaryotic proteins that are functionally equivalent to bacterial L7/L12. L12p is the archaeal homolog. Unlike other ribosomal proteins, the archaeal L12p and eukaryotic P1 and P2 do not share sequence similarity with their bacterial counterparts. They are part of the ribosomal stalk (called the L7/L12 stalk in bacteria), along with 28S rRNA and the proteins L11 and P0 in eukaryotes (23S rRNA, L11, and L10e in archaea). In bacterial ribosomes, L7/L12 homodimers bind the extended C-terminal helix of L10 to anchor the L7/L12 molecules to the ribosome. Eukaryotic P1/P2 heterodimers and archaeal L12p homodimers are believed to bind the L10 equivalent proteins, eukaryotic P0 and archaeal L10e, in a similar fashion. P1 and P2 (L12p, L7/L12) are the only proteins in the ribosome to occur as multimers, always appearing as sets of dimers. Recent data indicate that most archaeal species contain

>PF01885 PTS_2-RNA: RNA 2'-phosphotransferase, Tpt1 / KptA family; InterPro: IPR002745 The final step of tRNA splicing in Saccharomyces cerevisiae (Baker's yeast) requires 2'-phosphotransferase (Tpt1) to transfer the 2'-phosphate from ligated tRNA to NAD, producing mature tRNA and ADP ribose-1' '-2' '-cyclic phosphate

Probab=83.37  E-value=2.6  Score=27.03  Aligned_cols=36  Identities=31%  Similarity=0.212  Sum_probs=24.2

Q ss_pred             CCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           50 DTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        50 D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ..|.+|++..+||-..+..-+..++.++|.+++..-
T Consensus        26 ~~d~~G~v~v~dLL~~~~~~~~~~t~~~i~~vV~~~   61 (186)
T PF01885_consen   26 VMDPDGWVSVDDLLRALRFKGLWVTEEDIREVVETD   61 (186)
T ss_dssp             ---TT--EEHHHHHHHHHHT-TT--HHHHHHHHHH-
T ss_pred             ccCCCCCEeHHHHHHHHHHcCCCCCHHHHHHHHhhC
Confidence            467789999999999998878888999999998753

Yeast and Mus musculus (Mouse) Tpt1 protein and bacterial KptA protein can catalyze the conversion of the generated intermediate to both product and the original substrate, these enzymes likely use the same reaction mechanism. Step 1 of this reaction is strikingly similar to the ADP-ribosylation of proteins catalyzed by a number of bacterial toxins. KptA, a functional Tpt1 protein homologue from Escherichia coli is strikingly similar to yeast Tpt1 in its kinetic parameters, although E. coli is not known to have a 2'-phosphorylated RNA substrate [,].; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0006388 tRNA splicing, via endonucleolytic cleavage and ligation; PDB: 1WFX_A.

>PRK00819 RNA 2'-phosphotransferase; Reviewed

Probab=83.31  E-value=2.8  Score=26.79  Aligned_cols=34  Identities=24%  Similarity=0.071  Sum_probs=28.9

Q ss_pred             CCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           51 TDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        51 ~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      -|.+|++..++|-..++.-+..++.+++.+++..
T Consensus        28 ld~~G~v~v~~Ll~~~~~~~~~~t~~~l~~vV~~   61 (179)
T PRK00819         28 LDEEGWVDIDALIEALAKAYKWVTRELLEAVVES   61 (179)
T ss_pred             cCCCCCEEHHHHHHHHHHccCCCCHHHHHHHHHc
Confidence            4778999999999998866667899999998864

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=83.09  E-value=2.3  Score=31.30  Aligned_cols=35  Identities=17%  Similarity=0.510  Sum_probs=28.8

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh-CCCCC
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL-GFEMT   74 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-g~~~~   74 (87)
                      .+|.+.|+.+|.+++|+|+...-..++..+ |++++
T Consensus       464 sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LP  499 (631)
T KOG0377|consen  464 SDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLP  499 (631)
T ss_pred             hHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCc
Confidence            468889999999999999999988888864 44443

>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]

Probab=82.08  E-value=3.5  Score=31.79  Aligned_cols=52  Identities=15%  Similarity=0.236  Sum_probs=43.4

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      .......-+..+|...|++++|.++..+...+++.+...+...-+..+++++
T Consensus       130 ~~~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~  181 (746)
T KOG0169|consen  130 QRSRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKES  181 (746)
T ss_pred             hcchHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            3444556678889999999999999999999999998888887777777765

>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]

Probab=81.32  E-value=2.3  Score=35.83  Aligned_cols=40  Identities=28%  Similarity=0.406  Sum_probs=32.3

Q ss_pred             HhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           45 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        45 ~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      .|+.||+|+.|.|+..|+..+|... ...++.+++-++..+
T Consensus      4062 tfkeydpdgkgiiskkdf~kame~~-k~ytqse~dfllsca 4101 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEGH-KHYTQSEIDFLLSCA 4101 (5019)
T ss_pred             cchhcCCCCCccccHHHHHHHHhcc-ccchhHHHHHHHHhh
Confidence            5888999999999999999999753 357888887776543

>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]

Probab=81.28  E-value=1.1  Score=32.77  Aligned_cols=30  Identities=23%  Similarity=0.371  Sum_probs=25.3

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      ...+.-+|+.+|.+++|.++..||+-+.+.
T Consensus       350 ~~SleYwFrclDld~~G~Lt~~el~~fyee  379 (493)
T KOG2562|consen  350 PASLEYWFRCLDLDGDGILTLNELRYFYEE  379 (493)
T ss_pred             ccchhhheeeeeccCCCcccHHHHHHHHHH
Confidence            345788899999999999999999976554

>PF03979 Sigma70_r1_1: Sigma-70 factor, region 1

Probab=81.26  E-value=2.8  Score=23.10  Aligned_cols=44  Identities=20%  Similarity=0.163  Sum_probs=26.2

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.....-  ...|+|+.+++..+|..  ..++.+.++.++..+.
T Consensus         6 ~~~i~~Li~~g--K~~G~lT~~eI~~~L~~--~~~~~e~id~i~~~L~   49 (82)
T PF03979_consen    6 EEAIKKLIEKG--KKKGYLTYDEINDALPE--DDLDPEQIDEIYDTLE   49 (82)
T ss_dssp             HHHHHHHHHHH--HHHSS-BHHHHHHH-S---S---HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hhcCcCCHHHHHHHcCc--cCCCHHHHHHHHHHHH
Confidence            34444444432  24699999999999874  3478888998887653

1; InterPro: IPR007127 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. RNA polymerase recruits alternative sigma factors as a means of switching on specific regulons. Most bacteria express a multiplicity of sigma factors. Two of these factors, sigma-70 (gene rpoD), generally known as the major or primary sigma factor, and sigma-54 (gene rpoN or ntrA) direct the transcription of a wide variety of genes. The other sigma factors, known as alternative sigma factors, are required for the transcription of specific subsets of genes. With regard to sequence similarity, sigma factors can be grouped into two classes, the sigma-54 and sigma-70 families. Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase; and sub-region 4.2, which seems to harbor a DNA-binding 'helix-turn-helix' motif involved in binding the conserved -35 region of promoters recognised by the major sigma factors [, ]. This entry represents Region 1.1 which modulates DNA binding by region 2 and 4 when sigma is unbound by the core RNA polymerase [, ]. Region 1.1 is also involved in promoter binding.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2K6X_A.

>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin

Probab=81.15  E-value=3.5  Score=26.34  Aligned_cols=29  Identities=21%  Similarity=0.440  Sum_probs=26.0

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      ..+.++|..+++.+.+.++..|+..+++.
T Consensus        96 ~kFe~iF~kya~~~~d~LT~~E~~~m~~~  124 (174)
T PF05042_consen   96 QKFEEIFSKYAKTGPDALTLRELWRMLKG  124 (174)
T ss_pred             HHHHHHHHHhCCCCCCCcCHHHHHHHHHh
Confidence            45888999999998899999999999886

Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.

>KOG4251 consensus Calcium binding protein [General function prediction only]

Probab=80.86  E-value=2.9  Score=28.51  Aligned_cols=52  Identities=19%  Similarity=0.319  Sum_probs=35.2

Q ss_pred             CCCHHHHHHHHHHhh-hhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFE-LFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~-~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      .+.....+.-++-|. .+|.|++|.++.+||...+.-+.+...-.++..++..
T Consensus       273 diddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~n~~~alne~~~~ma~  325 (362)
T KOG4251|consen  273 DIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQNFRLALNEVNDIMAL  325 (362)
T ss_pred             chHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCchhhhhhHHHHHHHHhh
Confidence            444444444444554 5699999999999999887666666666666666543

>TIGR01639 P_fal_TIGR01639 Plasmodium falciparum uncharacterized domain TIGR01639

Probab=80.72  E-value=5.8  Score=20.75  Aligned_cols=31  Identities=13%  Similarity=0.179  Sum_probs=22.9

Q ss_pred             CcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           55 GTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        55 G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      -.+|.+||...+..|+..++..++-.++..+
T Consensus         8 ~~lTeEEl~~~i~~L~~~~~~~dm~~IW~~v   38 (61)
T TIGR01639         8 KKLSKEELNELINSLDEIPNRNDMLIIWNQV   38 (61)
T ss_pred             HHccHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence            3577788888888888778877777766554

This model represents a conserved sequence region of about 60 amino acids found in over 40 predicted proteins of Plasmodium falciparum. It is not found elsewhere, including closely related species such as Plasmodium yoelii. No member of this family is characterized.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	87
3qrx_A	169	Chlamydomonas Reinhardtii Centrin Bound To Melittin		1e-15
2ami_A	96	Solution Structure Of The Calcium-Loaded N-Terminal		1e-15
3kf9_A	149	Crystal Structure Of The SdcenSKMLCK COMPLEX Length		2e-14
1zmz_A	98	Solution Structure Of The N-Terminal Domain (M1-S98		4e-13
2obh_A	143	Centrin-Xpc Peptide Length = 143		1e-11
2ggm_A	172	Human Centrin 2 Xeroderma Pigmentosum Group C Prote		3e-11
2joj_A	77	Nmr Solution Structure Of N-Terminal Domain Of Eupl		5e-10
3fwb_A	161	Sac3:sus1:cdc31 Complex Length = 161		3e-07
3u0k_A	440	Crystal Structure Of The Genetically Encoded Calciu		5e-07
2gv5_A	161	Crystal Structure Of Sfi1pCDC31P COMPLEX Length = 1		2e-06
3ek8_A	449	Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L		2e-06
3sg4_A	448	Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len		2e-06
3sg2_A	449	Crystal Structure Of Gcamp2-T116v,D381y Length = 44		2e-06
3evu_A	449	Crystal Structure Of Calcium Bound Dimeric Gcamp2,		2e-06
3evr_A	411	Crystal Structure Of Calcium Bound Monomeric Gcamp2		2e-06
3ekh_A	449	Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER		2e-06
3sg5_A	448	Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke		2e-06
3sg6_A	450	Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L		2e-06
3sg3_A	449	Crystal Structure Of Gcamp3-D380y Length = 449		2e-06
3sg7_A	448	Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4		2e-06
3o78_A	415	The Structure Of Ca2+ Sensor (Case-12) Length = 415		2e-06
3o77_A	415	The Structure Of Ca2+ Sensor (Case-16) Length = 415		2e-06
2i08_A	78	Solvation Effect In Conformational Changes Of Ef-Ha		3e-06
2lv7_A	100	Solution Structure Of Ca2+-Bound Cabp7 N-Terminal D		3e-06
2f2o_A	179	Structure Of Calmodulin Bound To A Calcineurin Pept		4e-06
1f70_A	76	Refined Solution Structure Of Calmodulin N-Terminal		5e-06
3uct_A	79	Structure Of Mn2+-Bound N-Terminal Domain Of Calmod		5e-06
3b32_A	75	Crystal Structure Of Calcium-Saturated Calmodulin N		5e-06
1ak8_A	76	Nmr Solution Structure Of Cerium-Loaded Calmodulin		5e-06
2lqc_A	77	Nmr Solution Structure Of A Ca2+-Calmodulin With A		5e-06
1j7o_A	76	Solution Structure Of Calcium-calmodulin N-terminal		5e-06
1sw8_A	79	Solution Structure Of The N-Terminal Domain Of Huma		5e-06
1cdm_A	144	Modulation Of Calmodulin Plasticity In Molecular Re		5e-06
2vay_A	146	Calmodulin Complexed With Cav1.1 Iq Peptide Length		5e-06
1prw_A	149	Crystal Structure Of Bovine Brain Ca++ Calmodulin I		5e-06
1up5_B	148	Chicken Calmodulin Length = 148		5e-06
1cdl_A	147	Target Enzyme Recognition By Calmodulin: 2.4 Angstr		5e-06
4gow_D	144	Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX		5e-06
4djc_A	152	1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA		5e-06
2llo_A	80	Solution Nmr-Derived Structure Of Calmodulin N-Lobe		5e-06
2ix7_A	145	Structure Of Apo-Calmodulin Bound To Unconventional		5e-06
2bbm_A	148	Solution Structure Of A Calmodulin-Target Peptide C		5e-06
1dmo_A	148	Calmodulin, Nmr, 30 Structures Length = 148		5e-06
1iq5_A	149	CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE		5e-06
1ahr_A	146	Calmodulin Mutant With A Two Residue Deletion In Th		5e-06
2wel_D	150	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		5e-06
2lv6_A	148	The Complex Between Ca-calmodulin And Skeletal Musc		5e-06
3ewt_A	154	Crystal Structure Of Calmodulin Complexed With A Pe		5e-06
1cm1_A	148	Motions Of Calmodulin-Single-Conformer Refinement L		5e-06
2ygg_B	150	Complex Of Cambr And Cam Length = 150		5e-06
3ifk_A	90	Crystal Structure Of Calcium-Saturated Calmodulin N		5e-06
2be6_A	150	2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC		5e-06
2bkh_B	149	Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc		5e-06
1xfu_O	149	Crystal Structure Of Anthrax Edema Factor (ef) Trun		5e-06
2vb6_B	149	Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo		5e-06
1ooj_A	149	Structural Genomics Of Caenorhabditis Elegans : Cal		5e-06
2k0j_A	148	Solution Structure Of Cam Complexed To Drp1p Length		5e-06
1clm_A	148	Structure Of Paramecium Tetraurelia Calmodulin At 1		6e-06
1exr_A	148	The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca		6e-06
1qs7_A	145	The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti		8e-06
1vrk_A	148	The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20		8e-06
1qtx_A	148	The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept		8e-06
4ds7_A	147	Crystal Structure Of Yeast Calmodulin Bound To The		1e-05
1deg_A	142	The Linker Of Des-Glu84 Calmodulin Is Bent As Seen		2e-05
1y0v_H	146	Crystal Structure Of Anthrax Edema Factor (Ef) In C		2e-05
1k93_D	144	Crystal Structure Of The Adenylyl Cyclase Domain Of		2e-05
1y6w_A	148	Trapped Intermediate Of Calmodulin Length = 148		2e-05
3ekj_A	449	Calcium-Free Gcamp2 (Calcium Binding Deficient Muta		3e-05
1xfx_O	149	Crystal Structure Of Anthrax Edema Factor (Ef) In C		3e-05
2ro8_A	79	Solution Structure Of Calcium Bound Soybean Calmodu		3e-05
1niw_A	148	Crystal Structure Of Endothelial Nitric Oxide Synth		3e-05
1ggz_A	148	Crystal Structure Of The Calmodulin-Like Protein (H		4e-05
1rfj_A	149	Crystal Structure Of Potato Calmodulin Pcm6 Length		4e-05
1f54_A	77	Solution Structure Of The Apo N-Terminal Domain Of		5e-05
2lhi_A	176	Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam L		6e-05
4aqr_A	149	Crystal Structure Of A Calmodulin In Complex With T		7e-05
2lhh_A	128	Solution Structure Of Ca2+-Bound Ycam Length = 128		7e-05
2lc5_A	85	Calmodulin-Like Protein From Entamoeba Histolytica:		7e-05
1npq_A	90	Structure Of A Rhodamine-Labeled N-Domain Troponin		7e-05
1lkj_A	146	Nmr Structure Of Apo Calmodulin From Yeast Saccharo		8e-05
1trf_A	76	Solution Structure Of The Tr1c Fragment Of Skeletal		1e-04
1avs_A	90	X-Ray Crystallographic Study Of Calcium-Saturated N		1e-04
1tnw_A	162	Nmr Solution Structure Of Calcium Saturated Skeleta		2e-04
4tnc_A	162	Refined Structure Of Chicken Skeletal Muscle Tropon		2e-04
1ytz_C	162	Crystal Structure Of Skeletal Muscle Troponin In Th		2e-04
2w49_0	159	Isometrically Contracting Insect Asynchronous Fligh		2e-04
5tnc_A	162	Refined Crystal Structure Of Troponin C From Turkey		2e-04
1tcf_A	159	Crystal Structure Of Calcium-Saturated Rabbit Skele		3e-04
1a2x_A	159	Complex Of Troponin C With A 47 Residue (1-47) Frag		3e-04
2lan_A	167	Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc		6e-04
1smg_A	90	Calcium-Bound E41a Mutant Of The N-Domain Of Chicke		7e-04
1f71_A	67	Refined Solution Structure Of Calmodulin C-Terminal		7e-04
1yru_B	74	Crystal Structure Analysis Of The Adenylyl Cyclaes		7e-04
2col_B	67	Crystal Structure Analysis Of CyaaC-Cam With Pyroph		7e-04
1zot_B	69	Crystal Structure Analysis Of The CyaaC-Cam With Pm		8e-04
1cmf_A	73	Nmr Solution Structure Of Apo Calmodulin Carboxy-Te		8e-04
1fw4_A	71	Crystal Structure Of E. Coli Fragment Tr2c From Cal		8e-04

>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Query: 22 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVL 81
          +R+D+ +GR  GL++++KQEI+EAF+LFDTDGSGTIDAKEL VAMRALGFE  +E    +
Sbjct: 11 ARRDQKKGRV-GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKM 69
Query: 82 VCTI 85
          +  I
Sbjct: 70 ISEI 73

>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor Domain Of Centrin Length = 96

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/56 (67%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Query: 22 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          +R+D+ +GR  GL++++KQEI+EAF+LFDTDGSGTIDAKEL VAMRALGFE  +E 
Sbjct: 13 ARRDQKKGRV-GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEE 67

>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX Length = 149

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 44/53 (83%)
Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI 85
          GL++++KQEI+EAF+LFDTDGSGTIDAKEL VAMRALGFE  +E    ++  I
Sbjct: 1  GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADI 53

>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of Human Centrin 2 Length = 98

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 12 FKRASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF 71
          FK+A++     RK ++  +   L++++KQEI+EAF+LFD DG+GTID KEL VAMRALGF
Sbjct: 5  FKKANMASSSQRK-RMSPKPE-LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGF 62
Query: 72 EMTEEHGIVLVCTI 85
          E  +E    ++  I
Sbjct: 63 EPKKEEIKKMISEI 76

>pdb|2OBH|A Chain A, Centrin-Xpc Peptide Length = 143

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI 85
          ++++KQEI+EAF+LFD DG+GTID KEL VAMRALGFE  +E    ++  I
Sbjct: 1  TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEI 51

>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein Complex Length = 172

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Query: 12 FKRASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF 71
          FK+A++     RK ++  +   L++++KQEI+EAF+LFD DG+GTID KEL VA RALGF
Sbjct: 5  FKKANMASSSQRK-RMSPKPE-LTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGF 62

>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes Octocarinatus Centrin Length = 77

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 27/40 (67%), Positives = 36/40 (90%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 73
          LS+++KQEIKEAF+LFDT+ +G+ID  EL VAMRALGF++
Sbjct: 1  LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDV 40

>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex Length = 161

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLV 82
          L +++KQEI EAF LFD +  G +D  EL VAM+ALGFE+ +   + L+
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLI 65

>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 1   MTQESLESVCLFKRASL------YKGVSRKDKIRGRHHG---LSQQKKQEIKEAFELFDT 51
           M   SLE  CL   A +        G   + K +G       L++++  E KEAF LFD 
Sbjct: 254 MQDTSLEDGCLVYHAQVRGVNFPSNGAVMQKKTKGWEPTRDQLTEEQIAEFKEAFSLFDK 313
Query: 52  DGSGTIDAKELNVAMRALGFEMTE 75
           DG GTI  KEL   MR+LG   TE
Sbjct: 314 DGDGTITTKELGTVMRSLGQNPTE 337

>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX Length = 161

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLV 82
          L +++KQEI EAF LFD +  G +D  EL VA +ALGFE+ +   + L+
Sbjct: 17 LLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLI 65

>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 346

>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 345

>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 346

>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 346

>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 309

>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 346

>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 345

>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 347

>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 346

>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 345

>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 312

>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 312

>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand Proteins: X-Ray Structure Of Ca2+-Saturated Double Mutant Q41l-K75i Of N-Domain Of Calmodulin Length = 78

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF L+D DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTE 45

>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman Length = 100

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 15 ASLYKGVSRKDKIRG--RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE 72
          A +Y+G+     +    R   + + + +EI+EAF++FD DG+G I  +EL  AMR+LG+ 
Sbjct: 9  ALMYRGIYTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYM 68
Query: 73 MTE 75
            E
Sbjct: 69 PNE 71

>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A New Way Of Making An Old Binding Mode Length = 179

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 5  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 46

>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain Length = 76

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In The Presence Of Zn2+ Length = 79

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-75 Length = 75

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino- Terminal Domain (Ce2-Tr1c), 23 Structures Length = 76

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 5  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 46

>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding Motif (Nscate) Peptide From The N-Terminal Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium Channel Alpha1c Subunit Length = 77

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain Length = 76

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d Calmodulin Refined With Paramagnetism Based Strategy Length = 79

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 1  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 42

>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 2  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 43

>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 5  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 46

>pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 2  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 43

>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 8  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 49

>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound With Er Alpha Peptide Length = 80

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 3  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 44

>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 5  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 46

>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 6  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 47

>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 51

>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 5  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 46

>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-90 Length = 90

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 5  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 46

>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 5  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 46

>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 5  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 46

>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 5  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 46

>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 5  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 46

>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 27/42 (64%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L+ ++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 1  LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 42

>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 27/42 (64%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L+ ++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 27/42 (64%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L+ ++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 4  LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 45

>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
            L++++  E KEAF LFD D SG+I A EL   MR+LG   +E
Sbjct: 3  QNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSE 46

>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          ++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 1  TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 41

>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          ++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 3  TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 43

>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          ++++  E KEAF LFD DG GTI  KEL   MR+LG   TE
Sbjct: 1  TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 41

>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin Length = 148

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL    R+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTE 45

>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant) Length = 449

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD DG G I  K+L   MR+LG   TE
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTE 346

>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin In The Presence Of 10 Millimolar Exogenously Added Calcium Chloride Length = 149

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL    R+LG   TE
Sbjct: 5  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTE 46

>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 1 N-Terminal Domain Length = 79

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L+ ++  E KEAF LFD DG G I  KEL   MR+LG   TE
Sbjct: 4  LTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTE 45

>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase Peptide Bound To Calmodulin Length = 148

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG GTI  KEL    R+LG   TE
Sbjct: 4  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTE 45

>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Human Epithelial Cells Length = 148

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++++  E KEAF LFD DG G I  +EL   MR+LG   TE
Sbjct: 4  LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTE 45

>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L++ +  E KEAF LFD DG G I  KEL   MR+LG   TE
Sbjct: 5  LTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTE 46

>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast Calmodulin Length = 77

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD D +G+I + EL   MR+LG   +E
Sbjct: 3  NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSE 45

>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam Length = 176

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD D +G+I + EL   MR+LG   +E
Sbjct: 4  NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSE 46

>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 25/42 (59%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          L+  +  E KEAF LFD DG G I  KEL   MR+LG   TE
Sbjct: 5  LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTE 46

>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD D +G+I + EL   MR+LG   +E
Sbjct: 3  NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSE 45

>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica: Solution Structure And Calcium-Binding Properties Of A Partially Folded Protein Length = 85

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          L+ +++QE KEAF+LFD D    + A+EL   MRALG   T++
Sbjct: 8  LTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQ 50

>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C Mutant (Ca2+ Saturated) In Complex With Skeletal Troponin I 115- 131 Length = 90

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIVE 87
          LS++   E K AF++FD DG G I  KEL   MR LG   T+     ++C + E
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDE 67

>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces Cerevisiae Length = 146

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           L++++  E KEAF LFD D +G+I + EL   MR+LG   +E
Sbjct: 3  NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSE 45

>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle Troponin-C Length = 76

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          LS++   E K AF++FD DG G I  KEL   MR LG   T+E 
Sbjct: 3  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEE 46

>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N- Terminal Domain Of Troponin C Length = 90

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          LS++   E K AF++FD DG G I  KEL   MR LG   T+E 
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEE 57

>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal Muscle Troponin C Length = 162

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          LS++   E K AF++FD DG G I  KEL   MR LG   T+E 
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEE 57

>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In The Two-Calcium State At 2-Angstroms Resolution Length = 162

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          LS++   E K AF++FD DG G I  KEL   MR LG   T+E 
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEE 57

>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated State Length = 162

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          LS++   E K AF++FD DG G I  KEL   MR LG   T+E 
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEE 57

>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 159

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          LS++   E K AF++FD DG G I  KEL   MR LG   T+E 
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEE 54

>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey Skeletal Muscle At 2.0 Angstroms Resolution Length = 162

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          LS++   E K AF++FD DG G I  KEL   MR LG   T+E 
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEE 57

>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal Troponin C Length = 159

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          LS++   E K AF++FD DG G I  KEL   MR LG   T+E 
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEE 54

>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of Troponin I Length = 159

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          LS++   E K AF++FD DG G I  KEL   MR LG   T+E 
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEE 54

>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc Length = 167

Iteration: 1
 Score = 38.9 bits (89), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 19 KGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          + +SRKD+       L  ++ +E++EAF  FD D  G I+ ++L   MR +G+  TE
Sbjct: 10 RNLSRKDR------SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTE 60

>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken Troponin C, Nmr, 40 Structures Length = 90

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          LS++   E K AF++FD DG G I  K L   MR LG   T+E 
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEE 57

>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain Length = 67

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          ++EI+EAF +FD DG+G I A EL   M  LG ++T+E
Sbjct: 1  EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 38

>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella Pertussis In Presence Of C-Terminal Calmodulin And 1mm Calcium Chloride Length = 74

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          ++EI+EAF +FD DG+G I A EL   M  LG ++T+E
Sbjct: 8  EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 45

>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate Length = 67

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          ++EI+EAF +FD DG+G I A EL   M  LG ++T+E
Sbjct: 4  EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 41

>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp Length = 69

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          ++EI+EAF +FD DG+G I A EL   M  LG ++T+E
Sbjct: 4  EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 41

>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal Domain Length = 73

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          ++EI+EAF +FD DG+G I A EL   M  LG ++T+E
Sbjct: 7  EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 44

>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin To 1.7 A Resolution Length = 71

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          ++EI+EAF +FD DG+G I A EL   M  LG ++T+E
Sbjct: 5  EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 42

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	87
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	2e-20
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	3e-10
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	4e-20
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	1e-19
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	4e-09
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	1e-19
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	7e-10
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	3e-19
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	4e-10
3fwb_A	161	Cell division control protein 31; gene gating, com	3e-19
3fwb_A	161	Cell division control protein 31; gene gating, com	6e-10
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	4e-19
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	8e-10
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	5e-19
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	9e-10
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	6e-19
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	2e-09
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	1e-18
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	4e-10
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	2e-18
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	2e-09
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	2e-18
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	3e-08
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	3e-18
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	3e-18
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	3e-07
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	5e-18
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	4e-09
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	7e-18
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	1e-08
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	2e-17
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	2e-09
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	2e-17
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	2e-17
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	1e-08
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	4e-17
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	2e-08
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	5e-17
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	2e-09
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	6e-17
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	7e-10
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	8e-17
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	2e-09
2jnf_A	158	Troponin C; stretch activated muscle contraction,	1e-16
2jnf_A	158	Troponin C; stretch activated muscle contraction,	5e-10
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	2e-16
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	9e-10
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	2e-16
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	7e-08
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	8e-04
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	2e-16
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	1e-09
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	2e-16
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	1e-09
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	2e-16
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	3e-09
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	7e-16
1y1x_A	191	Leishmania major homolog of programmed cell death	8e-16
1y1x_A	191	Leishmania major homolog of programmed cell death	3e-12
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	1e-15
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	2e-09
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	2e-15
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	3e-15
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	1e-08
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	8e-15
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	6e-11
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	1e-09
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	1e-14
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	6e-14
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	2e-07
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	3e-05
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	1e-13
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	2e-13
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	4e-13
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	7e-13
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	3e-09
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	8e-13
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	1e-08
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	1e-12
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	1e-12
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	2e-08
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	6e-08
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	2e-12
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	5e-09
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	2e-12
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	2e-12
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	3e-12
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	5e-12
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	2e-08
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	5e-12
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	4e-08
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	3e-06
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	8e-12
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	1e-11
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	6e-10
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	2e-11
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	1e-09
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	3e-11
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	3e-11
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	5e-11
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	2e-06
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	5e-11
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	1e-10
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	5e-07
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	1e-10
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	2e-10
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	4e-10
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	9e-06
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	3e-05
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	6e-10
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	1e-06
2hps_A	186	Coelenterazine-binding protein with bound coelent;	8e-10
2hps_A	186	Coelenterazine-binding protein with bound coelent;	2e-09
3li6_A	66	Calcium-binding protein; calcium signaling protein	2e-09
3li6_A	66	Calcium-binding protein; calcium signaling protein	4e-07
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	2e-09
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	7e-08
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	3e-09
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	5e-06
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	3e-09
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	4e-09
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	4e-09
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	7e-09
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	3e-07
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	8e-09
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	4e-04
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	2e-08
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	2e-08
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	5e-07
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	3e-08
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	6e-08
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	6e-07
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	7e-08
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	8e-08
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	8e-08
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	4e-07
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	1e-07
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	6e-07
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	1e-07
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	2e-07
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	7e-07
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	2e-07
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	4e-06
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	4e-06
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	5e-04
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-05
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	3e-05
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	7e-05
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	3e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	4e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	4e-04
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	5e-05
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	5e-05
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	5e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	9e-05
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	6e-04
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	1e-04
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	2e-04
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	4e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	5e-04
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	8e-04

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169

 Score = 78.8 bits (195), Expect = 2e-20
 Identities = 38/55 (69%), Positives = 49/55 (89%), Gaps = 1/55 (1%)

Query: 22 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          +R+D+ +GR  GL++++KQEI+EAF+LFDTDGSGTIDAKEL VAMRALGFE  +E
Sbjct: 11 ARRDQKKGRV-GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKE 64

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169

 Score = 52.2 bits (126), Expect = 3e-10
 Identities = 19/39 (48%), Positives = 25/39 (64%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
           ++EI +AF LFD D SGTI  K+L    + LG  +TEE 
Sbjct: 100 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEE 138

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77

 Score = 75.2 bits (186), Expect = 4e-20
 Identities = 27/43 (62%), Positives = 37/43 (86%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          LS+++KQEIKEAF+LFDT+ +G+ID  EL VAMRALGF++ + 
Sbjct: 1  LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKP 43

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score = 76.5 bits (189), Expect = 1e-19
 Identities = 23/55 (41%), Positives = 29/55 (52%)

Query: 22 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          S  D+       LS++   E K AF++FD DG G I  KEL   MR LG   T+E
Sbjct: 2  SMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE 56

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score = 51.4 bits (124), Expect = 7e-10
 Identities = 15/39 (38%), Positives = 23/39 (58%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
           ++E+   F +FD +  G ID +EL   +RA G  +TEE 
Sbjct: 95  EEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147

 Score = 75.2 bits (186), Expect = 3e-19
 Identities = 21/45 (46%), Positives = 28/45 (62%)

Query: 32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            L++++  E KEAF LFD D SG+I A EL   MR+LG   +E 
Sbjct: 3  QNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEA 47

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147

 Score = 51.3 bits (124), Expect = 4e-10
 Identities = 15/39 (38%), Positives = 26/39 (66%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
           +QE+ EAF++FD +G G I A EL   + ++G ++T+  
Sbjct: 83  EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 121

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score = 75.7 bits (187), Expect = 3e-19
 Identities = 23/43 (53%), Positives = 31/43 (72%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          L +++KQEI EAF LFD +  G +D  EL VAM+ALGFE+ + 
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKR 59

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score = 51.4 bits (124), Expect = 6e-10
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
             EIK AF+LFD D +G I  K L    + LG  +T+E
Sbjct: 95  LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDE 132

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score = 74.8 bits (185), Expect = 4e-19
 Identities = 23/45 (51%), Positives = 28/45 (62%)

Query: 32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE 
Sbjct: 2  EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEA 46

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score = 50.9 bits (123), Expect = 8e-10
 Identities = 17/38 (44%), Positives = 27/38 (71%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           ++E+ EAF++FD DG+G I A EL   M  LG ++T++
Sbjct: 82  EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD 119

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score = 75.3 bits (186), Expect = 5e-19
 Identities = 23/45 (51%), Positives = 28/45 (62%)

Query: 32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE 
Sbjct: 3  DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA 47

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score = 51.4 bits (124), Expect = 9e-10
 Identities = 19/39 (48%), Positives = 27/39 (69%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
           ++EI+EAF +FD DG+G I A EL   M  LG ++T+E 
Sbjct: 83  EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 121

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156

 Score = 74.5 bits (184), Expect = 6e-19
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          L Q++ QE+KEAF + D D  G +  +++      LG    ++
Sbjct: 12 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDK 54

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 6/38 (15%), Positives = 19/38 (50%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           ++ I+ AF +FD   +  ++ + +   +  +G    ++
Sbjct: 86  EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKD 123

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score = 73.3 bits (181), Expect = 1e-18
 Identities = 29/42 (69%), Positives = 37/42 (88%)

Query: 35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          ++++KQEI+EAF+LFD DG+GTID KEL VAMRALGFE  +E
Sbjct: 1  TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKE 42

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score = 51.7 bits (125), Expect = 4e-10
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           K+EI +AF+LFD D +G I  K L    + LG  +T+E
Sbjct: 78  KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDE 115

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143

 Score = 72.9 bits (180), Expect = 2e-18
 Identities = 15/43 (34%), Positives = 25/43 (58%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            Q + QE KEAF + D +  G ID ++L+  + ++G   T+E
Sbjct: 1  FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDE 43

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143

 Score = 49.4 bits (119), Expect = 2e-09
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           +  I+ AF  FD + SG I    L   +  +G   T+E
Sbjct: 75  EDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDE 112

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score = 73.3 bits (181), Expect = 2e-18
 Identities = 16/43 (37%), Positives = 26/43 (60%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          L  ++ +E++EAF  FD D  G I+ ++L   MR +G+  TE 
Sbjct: 5  LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEM 47

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score = 46.8 bits (112), Expect = 3e-08
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 40  QEIKEAFELFDTDGSGTIDAKELNVAMRA-LGFEMTEE 76
           +E+++AF  FDT+G G I   EL  AMRA LG ++   
Sbjct: 88  KELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHR 125

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90

 Score = 71.1 bits (175), Expect = 3e-18
 Identities = 23/55 (41%), Positives = 29/55 (52%)

Query: 22 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          S  D+       LS++   E K AF++FD DG G I  KEL   MR LG   T+E
Sbjct: 2  SMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE 56

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196

 Score = 73.9 bits (182), Expect = 3e-18
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           +Q + QE KEAF+L D D  G I   ++     +LG   TE+
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQ 93

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196

 Score = 45.0 bits (107), Expect = 3e-07
 Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           +  I  AF LFD +G G    + L  ++   G + +++
Sbjct: 125 EDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQD 161

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149

 Score = 72.2 bits (178), Expect = 5e-18
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           S+    + KEAF LFD  G   I A ++    RALG   T  
Sbjct: 2  FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNA 44

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149

 Score = 49.1 bits (118), Expect = 4e-09
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 36  QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           Q   ++  E   +FD +G+GT+   EL   +  LG +MTEE
Sbjct: 81  QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEE 121

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146

 Score = 71.9 bits (177), Expect = 7e-18
 Identities = 7/43 (16%), Positives = 12/43 (27%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            ++K  E        +    G I     +   R LG   +  
Sbjct: 9  QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSI 51

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146

 Score = 48.0 bits (115), Expect = 1e-08
 Identities = 7/38 (18%), Positives = 19/38 (50%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            +E+ + F  FD + +G +   ++   +   G  +T++
Sbjct: 83  VEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQ 120

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151

 Score = 70.7 bits (174), Expect = 2e-17
 Identities = 18/43 (41%), Positives = 23/43 (53%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           ++ + +E KEAFELFD  G G I   +    MRALG   T  
Sbjct: 4  FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNA 46

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151

 Score = 49.9 bits (120), Expect = 2e-09
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            ++  E F +FD +G+G +   EL   +  LG +MTEE
Sbjct: 86  YEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEE 123

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score = 71.1 bits (175), Expect = 2e-17
 Identities = 17/43 (39%), Positives = 27/43 (62%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          LS+++   +KE F++ DTD SGTI   EL   ++ +G E+ E 
Sbjct: 4  LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMES 46

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score = 48.0 bits (115), Expect = 1e-08
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 38  KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
           +++ +  AF  FD DGSG I   E+  A +  G  + + H
Sbjct: 80  REENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIH 117

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166

 Score = 69.9 bits (172), Expect = 4e-17
 Identities = 14/45 (31%), Positives = 24/45 (53%)

Query: 32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            LS+++   +KE F + D D SG I  +EL   ++ +G  + E 
Sbjct: 19 ESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKES 63

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 38  KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           ++  +  AF  FD DGSG I   EL  A    G  + + 
Sbjct: 97  REDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDV 133

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140

 Score = 69.1 bits (170), Expect = 5e-17
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
              K+AF LFD  G+G I    +   +RA G   T  
Sbjct: 4  DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLA 41

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 12/38 (31%), Positives = 22/38 (57%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            +E  + F++FD D +G I   EL   + +LG +++ E
Sbjct: 75  PEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNE 112

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score = 69.0 bits (170), Expect = 6e-17
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            E KEAFELFD++ +G I  + L   ++  G  +   
Sbjct: 5  VSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPA 42

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score = 50.9 bits (123), Expect = 7e-10
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           +  +++AF  FD +G+G I    L  A+  LG  +   
Sbjct: 78  EDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPH 115

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166

 Score = 69.5 bits (171), Expect = 8e-17
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
              + + ++ KEAF + D +  G ID  +L     A+G    + 
Sbjct: 17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKN 61

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166

 Score = 49.9 bits (120), Expect = 2e-09
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           +  I  AF++ D DG G+I    L   +   G   T E
Sbjct: 94  EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPE 131

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score = 68.7 bits (169), Expect = 1e-16
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 34 LSQQKKQEIKEAFELFDT-DGSGTIDAKELNVAMRALGFEMTEE 76
          LS  + + ++ AF  F+T +GSG +   ++ + +  LG + T+ 
Sbjct: 7  LSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKS 50

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score = 51.4 bits (124), Expect = 5e-10
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 30  RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
                 +Q +QE++EAF L+D +G+G I    +   +  L   ++ E
Sbjct: 81  GEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSE 127

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score = 68.4 bits (168), Expect = 2e-16
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 28 RGRHHGLSQQKKQEIKEAFELFDTDG-SGTIDAKELNVAMRALGFEMTEE 76
          +     L++++K E K AF++F      G+I  KEL   MR LG   T E
Sbjct: 6  KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPE 55

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score = 51.0 bits (123), Expect = 9e-10
 Identities = 13/38 (34%), Positives = 25/38 (65%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           ++E+ + F +FD +  G ID +EL + ++A G  +TE+
Sbjct: 94  EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITED 131

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score = 69.2 bits (170), Expect = 2e-16
 Identities = 9/43 (20%), Positives = 21/43 (48%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          L   +   ++  F   D D SGT+ ++E+   ++ +G++    
Sbjct: 51 LCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPP 93

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score = 46.4 bits (111), Expect = 7e-08
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 37  QKKQEIKEAFELFDTDGSGTIDAKELNVAMRA--LGFEMTEE 76
            KK+     F+ FD DG+G I  +EL        +   + ++
Sbjct: 126 LKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDK 167

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score = 35.3 bits (82), Expect = 8e-04
 Identities = 8/43 (18%), Positives = 16/43 (37%)

Query: 35  SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
            Q+   +I +     D++ SG I   +   A       + +E 
Sbjct: 88  YQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEV 130

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score = 67.9 bits (167), Expect = 2e-16
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            +I+E F++FD D  G +  +EL  A+R+LG   T  
Sbjct: 4  ADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNA 41

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score = 50.2 bits (121), Expect = 1e-09
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query: 37  QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           ++ +E+ +AF   D +G+GTI   EL   +  LG  +T  
Sbjct: 73  EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSS 112

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156

 Score = 68.0 bits (167), Expect = 2e-16
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 34 LSQQKKQEIKEAFELFD--TDGSGTIDAKELNVAMRALGFEMTEE 76
          LSQ +  ++K+ FELFD      G +DA +L    R LG     E
Sbjct: 3  LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNE 47

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156

 Score = 50.2 bits (121), Expect = 1e-09
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
             +  EAF+ FD +G G I   EL   + ALG  +++E
Sbjct: 83  FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDE 120

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score = 67.6 bits (166), Expect = 2e-16
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           +  K+ F LFD  G G I    L   +RA+G+  T +
Sbjct: 3  TRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQ 40

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score = 49.5 bits (119), Expect = 3e-09
 Identities = 10/42 (23%), Positives = 25/42 (59%)

Query: 35  SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           ++ K ++  +AF++FD + +G +   +L   +  LG ++T+ 
Sbjct: 78  TKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDA 119

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score = 64.9 bits (159), Expect = 7e-16
 Identities = 17/43 (39%), Positives = 27/43 (62%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          LS+++   +KE F++ DTD SGTI   EL   ++ +G E+ E 
Sbjct: 17 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMES 59

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score = 67.3 bits (165), Expect = 8e-16
 Identities = 16/45 (35%), Positives = 20/45 (44%)

Query: 32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
                  QE+ E F   DTDGSG I   ELN A+ + G   +  
Sbjct: 19 SARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLA 63

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score = 58.1 bits (141), Expect = 3e-12
 Identities = 10/40 (25%), Positives = 23/40 (57%)

Query: 37  QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
                ++E F   D+ G G +D+ E+  A+ + G++++E+
Sbjct: 90  HFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQ 129

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107

 Score = 64.3 bits (157), Expect = 2e-15
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
              K +  KE +  FD +G+G ID   L   +  LG   T  
Sbjct: 26 DLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHL 68

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score = 65.7 bits (161), Expect = 3e-15
 Identities = 9/43 (20%), Positives = 19/43 (44%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           +    +++K  F + D DG G I  ++L   +   G ++   
Sbjct: 46 SNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYN 88

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score = 48.4 bits (116), Expect = 1e-08
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
             Q  K+ I  AF +FD D  G I   EL   +     +    
Sbjct: 116 RKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNIT 158

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score = 66.5 bits (162), Expect = 8e-15
 Identities = 23/56 (41%), Positives = 29/56 (51%)

Query: 21  VSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           +            L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE 
Sbjct: 293 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA 348

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score = 55.7 bits (134), Expect = 6e-11
 Identities = 7/59 (11%), Positives = 15/59 (25%)

Query: 18  YKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            +  SR      +H        +   +   +F  D        E+      L   +  +
Sbjct: 225 VQCFSRYPDHMKQHDFFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELK 283

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score = 51.8 bits (124), Expect = 1e-09
 Identities = 19/38 (50%), Positives = 27/38 (71%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           ++EI+EAF +FD DG+G I A EL   M  LG ++T+E
Sbjct: 384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 421

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86

 Score = 61.9 bits (151), Expect = 1e-14
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           + Q   + +  F+ FDT+G G I + EL  A++ LG  +T +
Sbjct: 5  DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPD 46

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score = 62.7 bits (153), Expect = 6e-14
 Identities = 13/52 (25%), Positives = 22/52 (42%)

Query: 25 DKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          +K+R +         Q +   F   D DGS ++DA E    +  LG  + + 
Sbjct: 22 EKLRAQCLSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQA 73

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score = 45.0 bits (107), Expect = 2e-07
 Identities = 9/44 (20%), Positives = 14/44 (31%)

Query: 32  HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
             +SQ ++  I  AF   D  G G +   +L             
Sbjct: 101 PPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVR 144

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score = 39.3 bits (92), Expect = 3e-05
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 38  KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
            + E +     +D +GSGT+D +E   A+R    +  E  
Sbjct: 71  DQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAV 110

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150

 Score = 60.6 bits (147), Expect = 1e-13
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
             +K    KE +  FD +  G ID   L   M  LG   T  
Sbjct: 44 NLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHL 86

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78

 Score = 58.3 bits (142), Expect = 2e-13
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           +++  F+ FDT+G G I   EL  A+R LG    +E
Sbjct: 3  DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE 39

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67

 Score = 57.5 bits (140), Expect = 4e-13
 Identities = 10/36 (27%), Positives = 13/36 (36%)

Query: 41 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            K  FE FD +  G +   E      A     T+E
Sbjct: 2  SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQE 37

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 59.4 bits (144), Expect = 7e-13
 Identities = 8/56 (14%), Positives = 17/56 (30%), Gaps = 5/56 (8%)

Query: 26 KIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELN-----VAMRALGFEMTEE 76
            +      + +     K  F   D + +G I   E+      + +  LG    + 
Sbjct: 2  NSKLTSDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQA 57

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 49.8 bits (119), Expect = 3e-09
 Identities = 10/54 (18%), Positives = 18/54 (33%)

Query: 24  KDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
            D++           +      F++ D D +G I   E     +A G   + E 
Sbjct: 93  TDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSED 146

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score = 59.4 bits (144), Expect = 8e-13
 Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 5/48 (10%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKEL-----NVAMRALGFEMTEE 76
           + +  +  K  F+  D +G+G I   E+     +     L     + 
Sbjct: 14 DNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQT 61

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score = 48.6 bits (116), Expect = 1e-08
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           ++     F++FD DGSGTI   E     +  G   ++E
Sbjct: 112 REWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQE 149

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83

 Score = 56.9 bits (138), Expect = 1e-12
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIV 80
          ++ + K E++ AF+  D +G G + A EL   M  L          V
Sbjct: 1  MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKV 47

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 59.9 bits (145), Expect = 1e-12
 Identities = 13/46 (28%), Positives = 20/46 (43%)

Query: 31 HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          H   S     +  E +  FD DGSG ++ KEL   ++ L     + 
Sbjct: 7  HLQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKA 52

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 48.3 bits (115), Expect = 2e-08
 Identities = 10/55 (18%), Positives = 23/55 (41%)

Query: 22  SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
             ++           +  +E  + +  +DTD SG I+ +EL   ++ L  +  + 
Sbjct: 85  PTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKT 139

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 47.2 bits (112), Expect = 6e-08
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 32  HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGI 79
               +   +E  +AFEL+D DG+G ID  EL+  ++ L  +  +E  I
Sbjct: 183 FQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDI 230

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 57.5 bits (140), Expect = 2e-12
 Identities = 6/34 (17%), Positives = 14/34 (41%)

Query: 43 KEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          +  F+  D +G G +  +E+   +        E+
Sbjct: 3  EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQ 36

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 48.7 bits (117), Expect = 5e-09
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 38  KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            K  +K  ++L D DG G +  +E+    +  G E   E
Sbjct: 73  DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAE 111

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92

 Score = 56.4 bits (137), Expect = 2e-12
 Identities = 18/43 (41%), Positives = 28/43 (65%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          +    ++E+KEAF++FD D +G I A EL   M  LG ++T+E
Sbjct: 3  MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDE 45

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71

 Score = 55.6 bits (135), Expect = 2e-12
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          ++   ++++ AF  FD DG G I   EL  AM  LG  + +E 
Sbjct: 1  ARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEE 43

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81

 Score = 55.6 bits (135), Expect = 3e-12
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE-MTEEH 77
          + Q  ++EI  AF++FD +G G ID  E    M+ +G E +T+  
Sbjct: 2  VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAE 46

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 57.1 bits (138), Expect = 5e-12
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           ++ I   F  FD DG+G ID  + + A +A+  E    
Sbjct: 2  YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVA 40

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 47.8 bits (114), Expect = 2e-08
 Identities = 10/50 (20%), Positives = 21/50 (42%)

Query: 26  KIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           ++R +    ++  +  +  A  + DTDG G +   +   A+ A G     
Sbjct: 84  RLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFGVPEDL 133

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 58.7 bits (142), Expect = 5e-12
 Identities = 8/43 (18%), Positives = 17/43 (39%)

Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           LS++    +++ F      GSG    ++L   +      + E 
Sbjct: 116 LSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEG 158

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 47.5 bits (113), Expect = 4e-08
 Identities = 10/40 (25%), Positives = 15/40 (37%)

Query: 37  QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
                +   F   DT+ +GT+  KE       LGF+    
Sbjct: 185 NDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSV 224

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 42.5 bits (100), Expect = 3e-06
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 38  KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE 72
               ++  +   D D SG +  +E+   +      
Sbjct: 251 CLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIP 285

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 54.7 bits (132), Expect = 8e-12
 Identities = 7/54 (12%), Positives = 20/54 (37%)

Query: 22 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          S ++ +  +      ++   ++  F   D + SG ++ +E       L     +
Sbjct: 9  SGRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPAD 62

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 56.1 bits (136), Expect = 1e-11
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 38  KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
              + +  F  +D D SG ID  EL  A+   G+ ++++
Sbjct: 72  YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQ 110

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 51.5 bits (124), Expect = 6e-10
 Identities = 9/34 (26%), Positives = 14/34 (41%)

Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE 72
          +  +   F+  D D SG I   EL  A+    + 
Sbjct: 6  QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWT 39

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score = 56.3 bits (136), Expect = 2e-11
 Identities = 10/45 (22%), Positives = 20/45 (44%)

Query: 32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          + +   +   I + F   D D SGT++  EL +     G  ++ +
Sbjct: 43 NTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQ 87

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score = 51.7 bits (124), Expect = 1e-09
 Identities = 9/40 (22%), Positives = 19/40 (47%)

Query: 37  QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           +  +     F +     SGT++  E+  A++ LGF + + 
Sbjct: 114 KFMELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQR 153

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147

 Score = 54.9 bits (132), Expect = 3e-11
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
              K +  K  +  FD +G+G ID   L   +  LG   T  
Sbjct: 42 DLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHL 84

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94

 Score = 53.4 bits (129), Expect = 3e-11
 Identities = 18/38 (47%), Positives = 26/38 (68%)

Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          ++EI+EAF + D DG+G I A EL   M  LG ++T+E
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDE 65

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 54.8 bits (132), Expect = 5e-11
 Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 22 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG--FEMTEEHG 78
          S  ++ +     L  +    + + F+ FD D  G ++  E+      +      T+E  
Sbjct: 18 SVGNQWQFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQV 76

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 42.5 bits (100), Expect = 2e-06
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
                  +++ D DG GT+D  EL   M+A    + +E 
Sbjct: 127 ALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEA 163

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105

 Score = 53.3 bits (128), Expect = 5e-11
 Identities = 14/52 (26%), Positives = 19/52 (36%)

Query: 25 DKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            I  R H         I + FE FDT  + TI  +E           +T+E
Sbjct: 9  RDILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDE 60

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score = 53.8 bits (130), Expect = 1e-10
 Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 11/54 (20%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVA-----------MRALGFEMTEE 76
           + ++ +E+ + F   D +G G +D KEL              +  L     E 
Sbjct: 34 TTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEA 87

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score = 44.2 bits (105), Expect = 5e-07
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 37  QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
             ++ +  AF+ FD+DGSG I  +EL         E+ +E 
Sbjct: 120 LSRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDET 158

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108

 Score = 51.9 bits (125), Expect = 1e-10
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE---MTEE 76
          G+S++   ++KE F + D D SG I+  EL   ++        +T  
Sbjct: 34 GMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTAS 80

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 51.5 bits (124), Expect = 2e-10
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF---EMTEE 76
          GLS+    ++K+ F   D D SG +D  EL   ++       E+TE 
Sbjct: 34 GLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTES 80

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 53.1 bits (127), Expect = 4e-10
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
             +        + ++ FD D +G I+ KEL+   R +  ++  +
Sbjct: 3  SAFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPK 47

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 40.8 bits (95), Expect = 9e-06
 Identities = 10/55 (18%), Positives = 21/55 (38%)

Query: 24  KDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHG 78
           ++ +             E  + +  +D D SG I A EL   ++ L  +  ++  
Sbjct: 88  ENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIP 142

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 39.7 bits (92), Expect = 3e-05
 Identities = 5/49 (10%), Positives = 21/49 (42%)

Query: 28  RGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
                    ++K++ ++ F  +D   +G ++  E++  ++ +   +   
Sbjct: 184 FKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPS 232

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score = 51.9 bits (125), Expect = 6e-10
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          +     + I E F   DT+ +G++  +E+   + ++G +  +
Sbjct: 33 VINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWD 74

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score = 43.1 bits (102), Expect = 1e-06
 Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 2/44 (4%)

Query: 34  LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
               +   +K AF   D D  G I   ++   +      +    
Sbjct: 102 WKNIESTFLKAAFNKIDKDEDGYISKSDIVSLVH--DKVLDNND 143

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 51.7 bits (124), Expect = 8e-10
 Identities = 5/38 (13%), Positives = 13/38 (34%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG 70
                 +++K   +  D  G G I  ++  +    + 
Sbjct: 7  SERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIA 44

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 50.1 bits (120), Expect = 2e-09
 Identities = 9/52 (17%), Positives = 21/52 (40%)

Query: 25  DKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           D +             +    ++  DTD  G +   E    ++A+G ++T++
Sbjct: 87  DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDD 138

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 48.3 bits (116), Expect = 2e-09
 Identities = 6/35 (17%), Positives = 14/35 (40%)

Query: 42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           +  F+  D +G G +  +E+   +        E+
Sbjct: 2  AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQ 36

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 42.2 bits (100), Expect = 4e-07
 Identities = 9/35 (25%), Positives = 18/35 (51%)

Query: 35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL 69
          + + +Q ++  F+  D DG+G ID  E      ++
Sbjct: 31 AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 50.5 bits (121), Expect = 2e-09
 Identities = 8/46 (17%), Positives = 18/46 (39%), Gaps = 4/46 (8%)

Query: 35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVA----MRALGFEMTEE 76
          +      +K+ F+ +D DG+G ++  +          A G +    
Sbjct: 2  TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAA 47

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 46.3 bits (110), Expect = 7e-08
 Identities = 10/47 (21%), Positives = 17/47 (36%)

Query: 29  GRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
                 ++     +K    + D +  G I+A E    + ALG    E
Sbjct: 91  QGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAE 137

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 50.1 bits (120), Expect = 3e-09
 Identities = 14/40 (35%), Positives = 23/40 (57%)

Query: 37  QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
                 ++ F  FDTD SGT+D +EL  A+  +GF ++ +
Sbjct: 100 AVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQ 139

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 41.3 bits (97), Expect = 5e-06
 Identities = 9/45 (20%), Positives = 13/45 (28%), Gaps = 1/45 (2%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
              Q +  +   F        G IDA EL   +   G     + 
Sbjct: 26 AFPGQTQDPLYGYFA-AVAGQDGQIDADELQRCLTQSGIAGGYKP 69

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108

 Score = 48.3 bits (116), Expect = 3e-09
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE---MTEEH 77
          GL+ +   ++K+AF + D D SG I+  EL + ++        +T+  
Sbjct: 34 GLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAE 81

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110

 Score = 48.3 bits (116), Expect = 4e-09
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEH 77
          GL      ++K+ F+  D D SG I+ +EL   +++    G ++T+  
Sbjct: 35 GLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAE 82

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109

 Score = 48.1 bits (115), Expect = 4e-09
 Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 3/47 (6%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEE 76
          GL ++   ++K+ F + D D SG I+  EL   ++       +++ +
Sbjct: 34 GLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAK 80

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 48.9 bits (117), Expect = 7e-09
 Identities = 9/42 (21%), Positives = 13/42 (30%)

Query: 35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          S    Q++K  F   D D  G I   +          E   +
Sbjct: 1  SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMK 42

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 44.3 bits (105), Expect = 3e-07
 Identities = 8/37 (21%), Positives = 13/37 (35%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           +  +   F   DT+    I   E  +    LG + T 
Sbjct: 93  EGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTM 129

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 48.5 bits (116), Expect = 8e-09
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 37  QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
                 KE F   D DGSGT++  EL  A+  +G+ ++ +
Sbjct: 67  AALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQ 106

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 35.8 bits (83), Expect = 4e-04
 Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 2/34 (5%)

Query: 46 FELFD--TDGSGTIDAKELNVAMRALGFEMTEEH 77
          +  F       G +DA+EL   +   G   T   
Sbjct: 3  YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSP 36

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109

 Score = 46.5 bits (111), Expect = 2e-08
 Identities = 13/38 (34%), Positives = 22/38 (57%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG 70
          GLS +   +IK+ F + D D SG I+ +EL + ++   
Sbjct: 35 GLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFS 72

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155

 Score = 47.2 bits (113), Expect = 2e-08
 Identities = 7/41 (17%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
            + + + + F+  D D SG++  +E  +++  L      +
Sbjct: 2  ADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPLVQ 41

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155

 Score = 43.8 bits (104), Expect = 5e-07
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 38  KKQEIKEAFELFDTDGSGTIDAKELNVAMRAL-GFEMTEE 76
           K+Q+++ AF ++D D  G I   EL   ++ + G  + + 
Sbjct: 73  KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDT 112

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109

 Score = 46.1 bits (110), Expect = 3e-08
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMR---ALGFEMTEEH 77
          GL+ +   +IK+AF + D D SG I+  EL + ++   A    +T+  
Sbjct: 35 GLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAE 82

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219

 Score = 46.8 bits (111), Expect = 6e-08
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVA-MRALGFEMTEE 76
             + + KQ   E F+ FD + +G +   E+    +  L  +    
Sbjct: 40 REKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTS 85

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219

 Score = 44.1 bits (104), Expect = 6e-07
 Identities = 8/40 (20%), Positives = 15/40 (37%)

Query: 37  QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
               E+   F+  D  G+  +D +E   A+  L     + 
Sbjct: 127 YDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKV 166

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173

 Score = 46.3 bits (110), Expect = 7e-08
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 37  QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
              ++ +  ++ FD D SGTI + EL  A  A GF + E 
Sbjct: 74  NNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEH 113

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 45.8 bits (109), Expect = 8e-08
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query: 37  QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
                 ++ F  FD+D SGT+D +EL  A+  +GF +  +
Sbjct: 69  AVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQ 108

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202

 Score = 46.3 bits (110), Expect = 8e-08
 Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 1/48 (2%)

Query: 30 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          R  G SQ     +   F   D +  G +   +L   + AL      + 
Sbjct: 19 RETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQ-QIGALAVNPLGDR 65

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202

 Score = 44.4 bits (105), Expect = 4e-07
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 38  KKQEIKEAFELFDTDGSGTIDAKELNVAMRAL-GFEMTEE 76
           ++ ++  AF+L+D D  G I   E+   +R + G ++TEE
Sbjct: 112 RRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEE 151

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 45.6 bits (108), Expect = 1e-07
 Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 32 HGLSQQKKQEIKEAFE-LFDTDGSGTIDAKELNVAMRALG 70
          H LS  ++ +I   F   +D +  G I+  +  +A++ + 
Sbjct: 4  HQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKIC 43

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 44.1 bits (104), Expect = 6e-07
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 19  KGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
           K  +   K   +   L +   + +   F++ DT G   ID  E +    + G   ++
Sbjct: 88  KMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSD 144

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135

 Score = 45.0 bits (107), Expect = 1e-07
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE-MTEE 76
            E+ + F L        I A+ L      LG E M++E
Sbjct: 39 VSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKE 77

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 45.3 bits (107), Expect = 2e-07
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 33 GLSQQKKQEIKEAFE-LFDTDGSGTIDAKELNVAMRALG 70
          GL+  +KQ+IK  F+   D +  G+I   +    M    
Sbjct: 1  GLNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYK 39

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 43.8 bits (103), Expect = 7e-07
 Identities = 8/57 (14%), Positives = 16/57 (28%)

Query: 19  KGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
               +          L    +  I   F+  D  G G +D +E     +    +  +
Sbjct: 84  AMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCAD 140

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEH 77
          GL  +   ++KE FE+ D D SG I+ +EL   ++     G ++ +  
Sbjct: 34 GLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTE 81

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76

 Score = 39.5 bits (93), Expect = 4e-06
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 39 KQEIKEAFELFDTDG--SGTIDAKELNVAMRALGFEMTEE 76
           +EIK AFE+F         I  +EL + M+ LG  + + 
Sbjct: 4  PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKG 43

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score = 41.7 bits (98), Expect = 4e-06
 Identities = 14/50 (28%), Positives = 28/50 (56%)

Query: 27  IRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           I   +  + ++ +Q++K  F+L+D DG+G+ID  EL     A+     ++
Sbjct: 80  IAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQ 129

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score = 35.9 bits (83), Expect = 5e-04
 Identities = 13/48 (27%), Positives = 23/48 (47%)

Query: 30 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
             GL+Q+  + I + +  FDT+  G +D  E   A+  +  E  E+ 
Sbjct: 47 GLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQK 94

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 41.6 bits (98), Expect = 5e-06
 Identities = 13/57 (22%), Positives = 25/57 (43%)

Query: 31  HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIVE 87
               SQ++ +E+ + F   D +G G +D +EL      L  E      +  + + V+
Sbjct: 337 SKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVD 393

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 39.7 bits (93), Expect = 2e-05
 Identities = 13/57 (22%), Positives = 25/57 (43%)

Query: 31  HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIVE 87
               + ++++E+ + F+  D +G G +D KEL      L     E   +  V   V+
Sbjct: 346 SKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVD 402

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208

 Score = 39.4 bits (92), Expect = 3e-05
 Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 15  ASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL-GFEM 73
           A        +             +  ++  AF L+D D    I   EL   +R + G  +
Sbjct: 88  AHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNI 147

Query: 74  TEE 76
           ++E
Sbjct: 148 SDE 150

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208

 Score = 38.2 bits (89), Expect = 7e-05
 Identities = 7/48 (14%), Positives = 16/48 (33%), Gaps = 1/48 (2%)

Query: 30 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          +  G S  +   +   F   D   +GT+  ++    +  L      + 
Sbjct: 19 KETGFSHSQITRLYSRFTSLDKGENGTLSREDFQ-RIPELAINPLGDR 65

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198

 Score = 39.0 bits (91), Expect = 3e-05
 Identities = 13/50 (26%), Positives = 24/50 (48%)

Query: 27  IRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           +      L  +  Q+++  F+L+D DG+G ID  EL   ++A+       
Sbjct: 75  VAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCN 124

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 38.9 bits (91), Expect = 4e-05
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 37  QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
             ++ ++ AF++FD DGSG I  KEL          +  E 
Sbjct: 414 LSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEE 454

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 36.2 bits (84), Expect = 4e-04
 Identities = 8/51 (15%), Positives = 18/51 (35%)

Query: 31  HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVL 81
               +  + +++ E F   DT+  G +D  EL             +   ++
Sbjct: 322 SKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLI 372

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score = 38.6 bits (90), Expect = 5e-05
 Identities = 10/50 (20%), Positives = 23/50 (46%)

Query: 27  IRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           +   +  L    + ++K  F+++D D +G ID +EL   + ++       
Sbjct: 82  VAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKAC 131

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 39.0 bits (90), Expect = 5e-05
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 40  QEIKEAFELFDTDGSGTIDAKELNVAMRALGF 71
           ++ +  ++ F+TD SGTI + EL  A  A GF
Sbjct: 804 KKWQGIYKRFETDRSGTIGSNELPGAFEAAGF 835

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 36.3 bits (83), Expect = 5e-04
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 38  KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           + +     F  FD D SG++ A E+ +A+ A GF++  +
Sbjct: 605 RIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQ 643

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 38.1 bits (89), Expect = 9e-05
 Identities = 11/46 (23%), Positives = 19/46 (41%)

Query: 31  HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
               SQ + +E+   F   D +G G +D  EL    + L     ++
Sbjct: 326 SKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQD 371

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 35.8 bits (83), Expect = 6e-04
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 37  QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE 72
             ++ ++ AF +FD+D SG I + EL         +
Sbjct: 415 LSRERLERAFRMFDSDNSGKISSTELATIFGVSDVD 450

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207

 Score = 37.8 bits (88), Expect = 1e-04
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 38  KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIVE 87
             +++K AF+L+D   +G I+ +EL   + AL  E        ++  +V+
Sbjct: 109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVD 158

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714

 Score = 37.1 bits (85), Expect = 2e-04
 Identities = 10/37 (27%), Positives = 22/37 (59%)

Query: 40  QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           Q+ ++ +   D D SGT+++ E+  A+   GF++  +
Sbjct: 605 QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQ 641

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score = 35.9 bits (83), Expect = 4e-04
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 38  KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
              +   AF +FD D  GT++ ++L+  +  L  E  +  
Sbjct: 96  PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTR 135

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 35.7 bits (83), Expect = 5e-04
 Identities = 8/44 (18%), Positives = 11/44 (25%)

Query: 31  HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 74
               S+     I         D S  I    +   + A G   T
Sbjct: 373 WSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAGGIPRT 416

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226

 Score = 35.2 bits (81), Expect = 8e-04
 Identities = 10/50 (20%), Positives = 22/50 (44%)

Query: 38  KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIVE 87
              +I  +F+L+D    G I+ +E+   + A   E        ++  I++
Sbjct: 120 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIID 169

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	87
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.49
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.29
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	99.29
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	99.27
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.27
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	99.27
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	99.27
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.25
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	99.24
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	99.23
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.2
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	99.19
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	99.18
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.18
1c07_A	95	Protein (epidermal growth factor receptor pathway	99.16
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.14
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.13
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	99.13
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	99.11
3fwb_A	161	Cell division control protein 31; gene gating, com	99.11
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.11
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.1
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	99.09
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	99.08
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	99.07
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	99.06
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.06
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	99.06
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	99.06
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	99.05
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.04
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	99.04
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	99.04
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	99.04
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	99.04
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.02
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.02
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	99.01
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	99.01
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	99.01
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	99.01
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.01
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	99.0
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	99.0
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.0
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	98.99
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	98.99
2jnf_A	158	Troponin C; stretch activated muscle contraction,	98.98
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	98.98
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	98.98
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	98.98
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	98.97
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	98.97
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	98.97
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	98.96
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	98.96
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	98.96
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	98.95
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	98.95
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	98.94
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	98.92
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	98.92
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	98.92
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	98.91
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	98.91
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	98.9
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	98.9
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	98.9
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	98.9
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	98.88
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	98.88
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	98.88
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	98.87
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	98.86
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	98.86
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	98.84
2jq6_A	139	EH domain-containing protein 1; metal binding prot	98.84
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	98.84
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	98.84
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	98.83
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	98.83
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	98.82
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	98.82
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	98.82
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	98.82
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	98.81
3li6_A	66	Calcium-binding protein; calcium signaling protein	98.81
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	98.81
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	98.81
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	98.8
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	98.8
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	98.8
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	98.8
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	98.79
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	98.79
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	98.78
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	98.78
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	98.78
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	98.78
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	98.77
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	98.76
3fwb_A	161	Cell division control protein 31; gene gating, com	98.76
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	98.76
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	98.76
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	98.75
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	98.75
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	98.75
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	98.74
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	98.74
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	98.74
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	98.72
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	98.72
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	98.72
2jnf_A	158	Troponin C; stretch activated muscle contraction,	98.71
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	98.71
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	98.71
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	98.71
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	98.71
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	98.71
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	98.71
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	98.71
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	98.7
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	98.69
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	98.68
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	98.67
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	98.67
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	98.66
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	98.66
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	98.65
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	98.65
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	98.64
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	98.64
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	98.64
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	98.64
1y1x_A	191	Leishmania major homolog of programmed cell death	98.63
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	98.63
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	98.62
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	98.62
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	98.62
1y1x_A	191	Leishmania major homolog of programmed cell death	98.62
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	98.61
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	98.61
1h8b_A	75	ACT-EF34, alpha-actinin 2, skeletal muscle isoform	98.6
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	98.59
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	98.59
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	98.59
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	98.58
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	98.58
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	98.57
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	98.56
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	98.56
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	98.55
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	98.55
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	98.55
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	98.54
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	98.53
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.53
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	98.52
2hps_A	186	Coelenterazine-binding protein with bound coelent;	98.51
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	98.5
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	98.49
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	98.49
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	98.48
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	98.48
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	98.47
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	98.47
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	98.46
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	98.46
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	98.45
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	98.45
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	98.44
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	98.44
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	98.42
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	98.42
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	98.41
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	98.4
2hps_A	186	Coelenterazine-binding protein with bound coelent;	98.39
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	98.38
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	98.38
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	98.37
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	98.37
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	98.37
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.32
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	98.31
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	98.31
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	98.31
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.3
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	98.28
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	98.27
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.27
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	98.27
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	98.26
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	98.26
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	98.25
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	98.24
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	98.22
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	98.22
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.21
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	98.2
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	98.19
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	98.18
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	98.18
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	98.17
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	98.14
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	98.14
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	98.14
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	98.14
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.11
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	98.11
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	98.11
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	98.1
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	98.09
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	98.09
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	98.06
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	98.06
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	98.05
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	98.04
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	98.04
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	98.04
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	98.02
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.02
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	98.01
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	98.01
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	98.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	97.99
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	97.94
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	97.94
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	97.89
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	97.89
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	97.8
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	97.78
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	97.75
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	97.67
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	97.67
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	97.67
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	97.57
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	97.51
2kav_A	129	Sodium channel protein type 2 subunit alpha; volta	97.51
3li6_A	66	Calcium-binding protein; calcium signaling protein	97.5
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	97.43
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	97.4
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	97.38
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	97.26
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	97.16
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	97.05
4dck_A	168	Sodium channel protein type 5 subunit alpha; IQ-mo	97.03
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	96.99
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	96.98
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	96.97
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	96.96
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	96.94
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	96.94
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	96.89
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	96.87
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	96.87
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	96.87
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	96.84
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	96.82
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	96.81
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	96.78
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	96.77
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	96.77
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	96.75
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	96.72
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	96.71
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	96.71
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	96.65
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	96.65
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	96.64
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	96.64
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	96.61
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	96.6
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	96.58
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	96.55
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	96.55
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	96.55
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	96.54
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	96.54
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	96.53
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	96.53
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	96.52
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	96.51
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	96.5
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	96.5
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	96.49
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	96.47
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	96.45
1sra_A	151	Sparc; extracellular matrix protein, calcium-bindi	96.44
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	96.43
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	96.42
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	96.38
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	96.33
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	96.32
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	96.32
1c07_A	95	Protein (epidermal growth factor receptor pathway	96.29
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	96.26
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	96.16
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	96.09
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	96.03
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	96.0
2jq6_A	139	EH domain-containing protein 1; metal binding prot	95.96
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	95.92
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	95.89
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	95.88
1sra_A	151	Sparc; extracellular matrix protein, calcium-bindi	95.66
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	95.64
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	95.62
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	95.55
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	95.36
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	95.3
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	95.13
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	94.77
2l5y_A	150	Stromal interaction molecule 2; EF-hand, SAM domai	94.71
1nub_A	229	Basement membrane protein BM-40; extracellular mod	94.67
2k60_A	150	Protein (stromal interaction molecule 1); EF-hand,	91.12
1nub_A	229	Basement membrane protein BM-40; extracellular mod	90.61
2dmp_A	89	Zinc fingers and homeoboxes protein 2; homeobox do	90.0
1tuz_A	118	Diacylglycerol kinase alpha; transferase, HR532, n	89.45
2ecc_A	76	Homeobox and leucine zipper protein homez; homeobo	89.12
2dmt_A	80	Homeobox protein BARH-like 1; homeobox domain, thr	87.91
1h8b_A	75	ACT-EF34, alpha-actinin 2, skeletal muscle isoform	87.86
2qpt_A	550	EH domain-containing protein-2; protein-nucleotide	87.59
1puf_A	77	HOX-1.7, homeobox protein HOX-A9; homeodomian, pro	87.32
2lbf_A	69	60S acidic ribosomal protein P1; ribosome, stalk,	85.77
2dmu_A	70	Homeobox protein goosecoid; homeobox domain, three	85.65
2dn0_A	76	Zinc fingers and homeoboxes protein 3; triple home	85.63
3nar_A	96	ZHX1, zinc fingers and homeoboxes protein 1; corep	85.19
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	85.17
2da3_A	80	Alpha-fetoprotein enhancer binding protein; homeob	84.41
2jg6_A	186	DNA-3-methyladenine glycosidase; 3-methyladenine-D	84.37
3a01_A	93	Homeodomain-containing protein; homeodomain, prote	84.23
2da5_A	75	Zinc fingers and homeoboxes protein 3; homeobox do	83.82
1b72_A	97	Protein (homeobox protein HOX-B1); homeodomain, DN	83.07
3nau_A	66	Zinc fingers and homeoboxes protein 2; ZHX2, corep	82.48
3a1y_A	58	50S ribosomal protein P1 (L12P); stalk, helix SPIN	81.77
2ofk_A	183	3-methyladenine DNA glycosylase I, constitutive; D	81.5
2lbf_B	70	60S acidic ribosomal protein P2; ribosome, stalk,	81.36
2ecb_A	89	Zinc fingers and homeoboxes protein 1; homeobox do	81.34
3iz5_v	113	60S acidic ribosomal protein P21 - P2 (L12P); euka	81.31
2e1o_A	70	Homeobox protein PRH; DNA binding protein, structu	81.03
1bw5_A	66	ISL-1HD, insulin gene enhancer protein ISL-1; DNA-	80.68
1b4a_A	149	Arginine repressor; helix turn helix; 2.50A {Geoba	80.62
2kt0_A	84	Nanog, homeobox protein nanog; homeodomain, struct	80.3

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.49  E-value=1.2e-13  Score=79.16  Aligned_cols=57  Identities=37%  Similarity=0.598  Sum_probs=53.5

Q ss_pred             cCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           30 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        30 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ....++++++++|+++|+.||.|++|+|+.+||+.+|+.+|..++.++++.+|+.++
T Consensus        26 ~~~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D   82 (100)
T 2lv7_A           26 RPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLD   82 (100)
T ss_dssp             SCCCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHC
T ss_pred             ccccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHC
Confidence            346789999999999999999999999999999999999999999999999999875

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.29  E-value=1.3e-11  Score=74.83  Aligned_cols=53  Identities=30%  Similarity=0.406  Sum_probs=50.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..|+++++.+|+++|..||.|++|+|+.+||+.+|+.+|..++..++..++..
T Consensus         8 ~~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~   60 (153)
T 3i5g_B            8 VKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKE   60 (153)
T ss_dssp             TTCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHHT
T ss_pred             cCCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHHh
Confidence            57999999999999999999999999999999999999999999999888764

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=99.27  E-value=1.1e-11  Score=67.98  Aligned_cols=55  Identities=16%  Similarity=0.221  Sum_probs=50.5

Q ss_pred             CCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHH---HHHHHHHH
Q 048414           31 HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH---GIVLVCTI   85 (87)
Q Consensus        31 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e---i~~li~~~   85 (87)
                      ...++++++.+++.+|..||.+++|+|+.+||+.+|+.+|..++..+   +..++..+
T Consensus         5 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~   62 (86)
T 1j7q_A            5 ARALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGP   62 (86)
T ss_dssp             CCCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCS
T ss_pred             cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh
Confidence            35678889999999999999999999999999999999999999999   99888765

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.27  E-value=3.8e-12  Score=78.76  Aligned_cols=56  Identities=38%  Similarity=0.558  Sum_probs=52.2

Q ss_pred             CCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           31 HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        31 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +..|+++++++|+++|..||.|++|+|+.+||+.+|+.+|.+++..++..++..++
T Consensus         2 a~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d   57 (176)
T 2lhi_A            2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEID   57 (176)
T ss_dssp             CCCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTC
T ss_pred             CCcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhC
Confidence            36899999999999999999999999999999999999999999999999987653

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=99.27  E-value=6.9e-12  Score=69.95  Aligned_cols=57  Identities=11%  Similarity=0.152  Sum_probs=49.2

Q ss_pred             cccCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           28 RGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        28 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ......+++++++.++.+|+.||.|++|+|+.+||..+|+.+|  ++..+++.++..++
T Consensus        15 ~~~~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~D   71 (91)
T 2pmy_A           15 YFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRLD   71 (91)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHC
T ss_pred             HHHhccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC--cCHHHHHHHHHHhC
Confidence            3344678899999999999999999999999999999999998  68899999998764

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=99.27  E-value=1.7e-11  Score=65.71  Aligned_cols=53  Identities=53%  Similarity=0.784  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +++++++.++.+|..||.+++|+|+.+||..+|+.+|..++..++..++..++
T Consensus         1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d   53 (77)
T 2joj_A            1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYD   53 (77)
T ss_dssp             CCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHC
Confidence            46788999999999999999999999999999999999999999999998764

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.25  E-value=3.4e-11  Score=84.02  Aligned_cols=59  Identities=39%  Similarity=0.557  Sum_probs=54.7

Q ss_pred             cccCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           28 RGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        28 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+....++++++++|+++|+.||.|++|+|+.+||+.+|+.+|..++..+++.+++.++
T Consensus       290 ePs~E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D  348 (440)
T 3u0k_A          290 EPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD  348 (440)
T ss_dssp             CCBCBCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             HhhHhhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            33446899999999999999999999999999999999999999999999999998875

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=99.24  E-value=3.5e-11  Score=66.52  Aligned_cols=55  Identities=38%  Similarity=0.528  Sum_probs=51.5

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++++..++.+|..||.+++|+|+.+||..+|+.+|..++..+++.++..++
T Consensus        12 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D   66 (90)
T 1avs_A           12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVD   66 (90)
T ss_dssp             HHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             HhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            3578999999999999999999999999999999999999999999999998764

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=99.23  E-value=3.4e-11  Score=65.89  Aligned_cols=54  Identities=28%  Similarity=0.426  Sum_probs=48.7

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..+++++.+.++.+|..||.|++|+|+.+||..+|+.+| .++..+++.++..++
T Consensus         3 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D   56 (86)
T 2opo_A            3 AEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEID   56 (86)
T ss_dssp             ---CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHC
T ss_pred             ccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhC
Confidence            467889999999999999999999999999999999999 999999999998764

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.20  E-value=2.4e-11  Score=72.71  Aligned_cols=55  Identities=35%  Similarity=0.515  Sum_probs=51.5

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..|+++++++|+.+|..||.|++|+|+.+||+.+|+.+|.+++..++..++..++
T Consensus         2 s~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d   56 (148)
T 2lmt_A            2 SELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAE   56 (148)
T ss_dssp             CSCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcc
Confidence            4689999999999999999999999999999999999999999999999988764

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.19  E-value=6.2e-11  Score=66.43  Aligned_cols=51  Identities=10%  Similarity=0.014  Sum_probs=46.8

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++.++.++++++|+.||.|++|+|+.+||+.+|+.+|  ++..++..++..++
T Consensus         3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D   53 (92)
T 1fi6_A            3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSD   53 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHC
Confidence            5788999999999999999999999999999999987  67889999998764

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=99.18  E-value=8.4e-11  Score=65.05  Aligned_cols=53  Identities=34%  Similarity=0.502  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++.+..+.++.+|..||.+++|+|+.+||+.+|+.+|..++..++..++..++
T Consensus         3 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d   55 (92)
T 2kn2_A            3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEAD   55 (92)
T ss_dssp             CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             CCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            45677889999999999999999999999999999999999999999998764

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.18  E-value=1.1e-11  Score=75.59  Aligned_cols=51  Identities=29%  Similarity=0.477  Sum_probs=47.1

Q ss_pred             CCCCHHHHHHHHHHhhhhCC--CCCCcccHHHHHHHHHHhCCCCCHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDT--DGSGTIDAKELNVAMRALGFEMTEEHGIVLV   82 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~--d~~G~I~~~el~~~l~~lg~~~~~~ei~~li   82 (87)
                      +.|+++++++++++|..||.  |++|+|+..||+.+|+.+|.+++..++..++
T Consensus         1 sqLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~   53 (159)
T 3i5g_C            1 SQLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHG   53 (159)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTT
T ss_pred             CCCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHH
Confidence            36899999999999999995  8999999999999999999999999998764

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.16  E-value=8.1e-11  Score=66.36  Aligned_cols=51  Identities=18%  Similarity=0.137  Sum_probs=46.6

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++.++.++++++|+.||.|++|+|+.+||+.+|+.+|  ++..+++.++..++
T Consensus         4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D   54 (95)
T 1c07_A            4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCD   54 (95)
T ss_dssp             SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC--CCHHHHHHHHHHHC
Confidence            5778899999999999999999999999999999887  67899999998764

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.14  E-value=1e-10  Score=71.29  Aligned_cols=49  Identities=29%  Similarity=0.445  Sum_probs=45.5

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++.+|+.||.+++|+|+.+||+.+|..+|.+++.++++.||+.++
T Consensus        83 ~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D  131 (159)
T 3i5g_C           83 AADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCD  131 (159)
T ss_dssp             CHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            3567999999999999999999999999999999999999999998764

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.13  E-value=5.2e-11  Score=72.22  Aligned_cols=48  Identities=23%  Similarity=0.364  Sum_probs=44.8

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+.|+.+|+.||.|++|+|+.+||+.+|..+|.+++.++++.||+.++
T Consensus        84 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D  131 (153)
T 3i5g_B           84 EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAP  131 (153)
T ss_dssp             HHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCC
T ss_pred             HHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhC
Confidence            567999999999999999999999999999999999999999997653

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=99.13  E-value=2e-10  Score=65.92  Aligned_cols=51  Identities=16%  Similarity=0.111  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHhhhhC-CCCC-CcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFD-TDGS-GTIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D-~d~~-G~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~   86 (87)
                      +..+.+|+++|+.|| +|++ |+|+.+||+.+|+.     +|..++.++++.+|++++
T Consensus         6 e~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D   63 (101)
T 3nso_A            6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLD   63 (101)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhC
Confidence            456789999999997 8887 99999999999996     467889999999999875

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=99.11  E-value=2.8e-10  Score=64.91  Aligned_cols=54  Identities=28%  Similarity=0.376  Sum_probs=49.9

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..+ ++.+..++.+|..||.|++|+|+.+||..+|+.+|..++..++..++..++
T Consensus        25 ~~l-~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D   78 (107)
T 2d58_A           25 EDL-PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVS   78 (107)
T ss_dssp             TTH-HHHHHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             Hhh-HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            445 788899999999999999999999999999999999999999999998764

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.11  E-value=5.2e-10  Score=66.61  Aligned_cols=57  Identities=42%  Similarity=0.604  Sum_probs=52.9

Q ss_pred             cCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           30 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        30 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ....++++++..++.+|..+|.+++|+|+.+||..+|+.+|..++..++..++..++
T Consensus        13 ~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d   69 (161)
T 3fwb_A           13 LNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYD   69 (161)
T ss_dssp             TTTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            346799999999999999999999999999999999999999999999999998764

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.11  E-value=1.7e-10  Score=68.41  Aligned_cols=52  Identities=58%  Similarity=0.877  Sum_probs=48.4

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +++++.+++.+|..||.|++|+|+.+||..+|+.+|..++..++..++..++
T Consensus         1 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d   52 (143)
T 2obh_A            1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEID   52 (143)
T ss_dssp             CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            4578899999999999999999999999999999999999999999998764

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.10  E-value=4.7e-10  Score=66.54  Aligned_cols=55  Identities=42%  Similarity=0.601  Sum_probs=51.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++++.+++.+|..||.+++|+|+.+||..+|+.+|..++..++..++..++
T Consensus         2 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d   56 (148)
T 1exr_A            2 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD   56 (148)
T ss_dssp             CCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC
T ss_pred             CcCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHC
Confidence            4678999999999999999999999999999999999999999999999988764

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=99.09  E-value=2.7e-10  Score=63.89  Aligned_cols=50  Identities=36%  Similarity=0.496  Sum_probs=46.2

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +..++++.+|+.||.|++|+|+.+||+.+|+.+|..++.++++.+++.++
T Consensus        26 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D   75 (94)
T 2kz2_A           26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD   75 (94)
T ss_dssp             SCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            34677999999999999999999999999999999999999999998874

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=99.08  E-value=4.2e-10  Score=65.20  Aligned_cols=53  Identities=9%  Similarity=0.112  Sum_probs=48.1

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      -.+++++.++++.+|+.||.|++|+|+.+||+.+|+  +..++.+++..+++.++
T Consensus         6 w~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D   58 (111)
T 2kgr_A            6 WAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSD   58 (111)
T ss_dssp             SSSCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHC
Confidence            347889999999999999999999999999999998  67789999999998764

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=99.07  E-value=3.5e-10  Score=66.11  Aligned_cols=52  Identities=15%  Similarity=0.247  Sum_probs=46.5

Q ss_pred             CHHHHHHHHHHhhhhC-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFD-TDGSG-TIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D-~d~~G-~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~   86 (87)
                      ..+.+++|+.+|+.|| .|++| +|+.+||+.+|+.     +|..++.++++.+|++++
T Consensus        17 ~~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D   75 (113)
T 2lnk_A           17 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLD   75 (113)
T ss_dssp             HHHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHC
T ss_pred             chhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhC
Confidence            4567889999999999 89997 9999999999987     778889999999999875

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.06  E-value=6.2e-11  Score=64.89  Aligned_cols=54  Identities=33%  Similarity=0.423  Sum_probs=48.5

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++.++...++.+|..||.+++|+|+.+||+.+|+.+|..++..++..++..++
T Consensus        16 ~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d   69 (87)
T 1s6j_A           16 RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAAD   69 (87)
T ss_dssp             SSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHC
T ss_pred             HCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            455556677999999999999999999999999999999999999999998774

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.06  E-value=5.5e-10  Score=68.98  Aligned_cols=51  Identities=29%  Similarity=0.514  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ....++++.+|+.||.|++|+|+.+||+.+|..+|..++.++++.||+.++
T Consensus        80 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d  130 (176)
T 2lhi_A           80 NDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS  130 (176)
T ss_dssp             SHHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc
Confidence            345678999999999999999999999999999999999999999998764

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.06  E-value=6e-11  Score=68.89  Aligned_cols=52  Identities=8%  Similarity=0.012  Sum_probs=46.2

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++.++.++++++|+.||.|++|+|+.+||+.+|+.+|  ++.+++..+|+.++
T Consensus        15 ~ls~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D   66 (110)
T 1iq3_A           15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSD   66 (110)
T ss_dssp             CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHC
T ss_pred             cCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHc
Confidence            46778899999999999999999999999999998887  56778999998764

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=99.05  E-value=6.8e-10  Score=63.16  Aligned_cols=51  Identities=12%  Similarity=0.145  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHhhhhC-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFD-TDGSG-TIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D-~d~~G-~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~   86 (87)
                      ++++++++.+|+.|| .|++| +|+.+||+.+|+.     +|..++..+++.+|+.++
T Consensus         6 ~~~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D   63 (99)
T 2y5i_A            6 EGAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLD   63 (99)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHC
Confidence            456789999999997 89987 9999999999987     678899999999999875

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.04  E-value=5.3e-10  Score=66.75  Aligned_cols=48  Identities=35%  Similarity=0.549  Sum_probs=45.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||+.+|..+|..++..+++.+|+.++
T Consensus        82 ~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D  129 (148)
T 2lmt_A           82 EEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREAD  129 (148)
T ss_dssp             HHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhC
Confidence            456899999999999999999999999999999999999999999875

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=99.04  E-value=4.4e-10  Score=58.35  Aligned_cols=46  Identities=24%  Similarity=0.296  Sum_probs=43.2

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +++.+|+.||.+++|+|+.+||..+|..+|..++..++..++..++
T Consensus         2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D   47 (67)
T 1tiz_A            2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEID   47 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHC
Confidence            4789999999999999999999999999999999999999998764

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=99.04  E-value=5.1e-10  Score=69.67  Aligned_cols=55  Identities=31%  Similarity=0.409  Sum_probs=50.4

Q ss_pred             cCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           30 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        30 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ....++.+++..|+.+|..||.|++|+|+.+||..+|+.+|..++..++..++..
T Consensus        47 ~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~  101 (196)
T 3dtp_E           47 VFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAE  101 (196)
T ss_dssp             SSCSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTT
T ss_pred             hhhhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            3356899999999999999999999999999999999999999999999988753

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=99.04  E-value=2.4e-10  Score=60.14  Aligned_cols=49  Identities=31%  Similarity=0.457  Sum_probs=45.3

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..+.++.+|..||.+++|+|+.+||..+|+.+|..++..+++.++..++
T Consensus         4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d   52 (71)
T 2b1u_A            4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREAD   52 (71)
T ss_dssp             THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCC
T ss_pred             cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            4567999999999999999999999999999999999999999998764

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.02  E-value=1.7e-09  Score=63.40  Aligned_cols=55  Identities=42%  Similarity=0.606  Sum_probs=51.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++++..++.+|..+|.+++|+|+.+||..+|+.+|..++..++..++..++
T Consensus         3 ~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d   57 (147)
T 4ds7_A            3 QNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEID   57 (147)
T ss_dssp             -CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             CcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhc
Confidence            5789999999999999999999999999999999999999999999999988764

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.02  E-value=1.4e-09  Score=64.42  Aligned_cols=48  Identities=35%  Similarity=0.497  Sum_probs=45.2

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.|++|+|+.+||+.+|..+|..++.+++..+|+.++
T Consensus        78 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D  125 (143)
T 2obh_A           78 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEAD  125 (143)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            567999999999999999999999999999999999999999998874

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=99.01  E-value=1.4e-09  Score=63.85  Aligned_cols=53  Identities=30%  Similarity=0.379  Sum_probs=49.7

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      .++++++.+++.+|..||.+++|+|+.+||..+|+.+|..++..++..++..+
T Consensus         1 ~l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~   53 (149)
T 2mys_C            1 EFSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNP   53 (149)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence            36788999999999999999999999999999999999999999999998776

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=99.01  E-value=9.2e-10  Score=63.53  Aligned_cols=51  Identities=6%  Similarity=0.029  Sum_probs=46.8

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++.++..+++++|+.||+ ++|+|+.+|++.+|+.+|  ++.+++.++++.++
T Consensus         8 ~ls~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D   58 (106)
T 1eh2_A            8 AVKPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSK--LPVDILGRVWELSD   58 (106)
T ss_dssp             SSCHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTT--CCHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHc
Confidence            4688999999999999999 999999999999999987  78999999998875

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=99.01  E-value=6.6e-10  Score=62.83  Aligned_cols=50  Identities=24%  Similarity=0.189  Sum_probs=45.5

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...+.++.+|+.||.+++|+|+..||+.+|+.+|..++..+++.++..++
T Consensus        21 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d   70 (105)
T 1wlz_A           21 SHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP   70 (105)
T ss_dssp             HTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSC
T ss_pred             chHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcC
Confidence            45678999999999999999999999999999999999999999987653

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=99.01  E-value=1.1e-09  Score=60.59  Aligned_cols=51  Identities=12%  Similarity=0.218  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHhhhhC-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFD-TDGSG-TIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D-~d~~G-~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~   86 (87)
                      +..++.++.+|+.|| .+++| +|+.+||+.+|+.     +|..++..+++.++..++
T Consensus         5 ~~~~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D   62 (93)
T 1k2h_A            5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELD   62 (93)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            356788999999999 79999 9999999999998     999999999999998764

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.01  E-value=1.1e-09  Score=64.44  Aligned_cols=55  Identities=35%  Similarity=0.525  Sum_probs=51.8

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++++..++.+|..+|.+++|+|+.+||..+|+.+|..++..++..++..++
T Consensus         3 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d   57 (153)
T 3ox6_A            3 RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQIN   57 (153)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999999999999999999988764

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=99.00  E-value=6.8e-10  Score=62.59  Aligned_cols=51  Identities=20%  Similarity=0.246  Sum_probs=39.5

Q ss_pred             HHHHHHHHHHhhhhC-CCC-CCcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFD-TDG-SGTIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D-~d~-~G~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~   86 (87)
                      ++++++++.+|+.|| .|+ +|+|+.+||+.+|+.     +|..++..+++.+|+.++
T Consensus         5 ~~~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D   62 (95)
T 1j55_A            5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLD   62 (95)
T ss_dssp             HHHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhC
Confidence            356789999999999 788 589999999999987     566788889999998875

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=99.00  E-value=1.6e-09  Score=64.54  Aligned_cols=54  Identities=24%  Similarity=0.372  Sum_probs=47.7

Q ss_pred             cCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q 048414           30 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVC   83 (87)
Q Consensus        30 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~   83 (87)
                      ....++++++..|+.+|..||.+++|+|+.+||..+|+.+|..++..++..++.
T Consensus         8 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~   61 (156)
T 1wdc_B            8 VLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK   61 (156)
T ss_dssp             ----CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT
T ss_pred             hhccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            336789999999999999999999999999999999999999999999988874

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.00  E-value=2.2e-09  Score=64.48  Aligned_cols=56  Identities=63%  Similarity=0.898  Sum_probs=52.1

Q ss_pred             CCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           31 HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        31 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++++++..++.+|..+|.|++|+|+.+||..+|+.+|..++..++..++..++
T Consensus        19 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d   74 (169)
T 3qrx_A           19 RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEID   74 (169)
T ss_dssp             -CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHC
T ss_pred             CCCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Confidence            36789999999999999999999999999999999999999999999999998764

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=98.99  E-value=3.1e-10  Score=61.32  Aligned_cols=50  Identities=24%  Similarity=0.438  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG-FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg-~~~~~~ei~~li~~~~   86 (87)
                      .+..+.++ +|..||.|++|+|+.+||..+|+.+| ..++..++..++..++
T Consensus         5 ~~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D   55 (81)
T 1c7v_A            5 DDEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEAD   55 (81)
T ss_dssp             --CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHC
T ss_pred             ccHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhC
Confidence            34567899 99999999999999999999999999 9999999999998764

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=98.99  E-value=1.6e-09  Score=65.20  Aligned_cols=51  Identities=25%  Similarity=0.352  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+.+++++.+|..||.|++|+|+.+||+.+|+.+|..++..+++.++..++
T Consensus        46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D   96 (150)
T 2jjz_A           46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVT   96 (150)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHC
Confidence            677899999999999999999999999999999999999999999998875

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=98.98  E-value=2.6e-09  Score=63.53  Aligned_cols=55  Identities=22%  Similarity=0.403  Sum_probs=51.6

Q ss_pred             CCCCHHHHHHHHHHhhhhC-CCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFD-TDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D-~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++++..++.+|..|| .+++|+|+.+||..+|+.+|..++..++..++..++
T Consensus         5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D   60 (158)
T 2jnf_A            5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFD   60 (158)
T ss_dssp             TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHC
T ss_pred             hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            5789999999999999999 999999999999999999999999999999998764

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=98.98  E-value=1.5e-09  Score=65.20  Aligned_cols=54  Identities=26%  Similarity=0.344  Sum_probs=49.6

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..+ .+++++++.+|..||.|++|+|+.+||+.+|+.+|..++..+++.++..++
T Consensus        41 ~~l-~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D   94 (147)
T 1wy9_A           41 EDL-PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVS   94 (147)
T ss_dssp             TTH-HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             HHH-HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            345 688899999999999999999999999999999999999999999998764

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=98.98  E-value=3.9e-10  Score=63.59  Aligned_cols=51  Identities=12%  Similarity=0.088  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHhhhhC-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFD-TDGSG-TIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D-~d~~G-~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~   86 (87)
                      ++++++++.+|+.|| +|++| +|+.+||+.+|+.     +|..++..+++.+|+.++
T Consensus         8 e~~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D   65 (95)
T 2wcb_A            8 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLD   65 (95)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSS
T ss_pred             HHHHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHc
Confidence            456789999999999 89998 9999999999987     677889999999988764

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=98.98  E-value=1.7e-09  Score=63.33  Aligned_cols=51  Identities=25%  Similarity=0.405  Sum_probs=47.5

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++++.+++.+|..+|.+++|+|+.+||..+|+.+|..++..++..++..++
T Consensus         2 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d   52 (142)
T 2bl0_C            2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEAD   52 (142)
T ss_dssp             CHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            567889999999999999999999999999999999999999999998764

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=98.97  E-value=7.6e-10  Score=64.91  Aligned_cols=50  Identities=30%  Similarity=0.442  Sum_probs=46.2

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVC   83 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~   83 (87)
                      ++++++..++.+|..||.|++|+|+.+||..+|+.+|..++..++..++.
T Consensus         1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~   50 (143)
T 3j04_B            1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS   50 (143)
T ss_dssp             CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTT
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            57889999999999999999999999999999999999999998877653

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=98.97  E-value=2.4e-09  Score=63.80  Aligned_cols=55  Identities=33%  Similarity=0.477  Sum_probs=51.7

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCC-CCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDG-SGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~-~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++++..++.+|..||.++ +|.|+.+||..+|+.+|..++..++..++..++
T Consensus        10 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D   65 (161)
T 1dtl_A           10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD   65 (161)
T ss_dssp             GGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             hhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            5689999999999999999999 999999999999999999999999999998764

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=98.97  E-value=2.3e-09  Score=61.67  Aligned_cols=51  Identities=14%  Similarity=0.185  Sum_probs=43.7

Q ss_pred             HHHHHHHHHHhhhhC-CCCC-CcccHHHHHHHHHH-hC----CCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFD-TDGS-GTIDAKELNVAMRA-LG----FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D-~d~~-G~I~~~el~~~l~~-lg----~~~~~~ei~~li~~~~   86 (87)
                      +..+++|+.+|+.|| .|++ |+|+.+||+.+|+. +|    ..++..+++.+|++++
T Consensus         9 e~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D   66 (104)
T 3zwh_A            9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLD   66 (104)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHc
Confidence            456789999999997 7775 89999999999996 54    4578999999999876

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=98.96  E-value=9.8e-10  Score=58.94  Aligned_cols=46  Identities=30%  Similarity=0.549  Sum_probs=42.8

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++++.+|+.||.+++|+|+.+|+..+|+.+| .++..+++.++..++
T Consensus         3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D   48 (78)
T 1k9u_A            3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEID   48 (78)
T ss_dssp             CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhC
Confidence            4689999999999999999999999999999 999999999998764

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=98.96  E-value=1.3e-10  Score=63.01  Aligned_cols=50  Identities=26%  Similarity=0.370  Sum_probs=43.5

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC--CCCCHHHHHH----HHHHH
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG--FEMTEEHGIV----LVCTI   85 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg--~~~~~~ei~~----li~~~   85 (87)
                      .+..+.++.+|+.||.|++|+|+.+||..+|..+|  ..++.+++..    ++..+
T Consensus         3 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   58 (83)
T 1yx7_A            3 CKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMA   58 (83)
T ss_dssp             SCSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTT
T ss_pred             ccHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHh
Confidence            34566799999999999999999999999999999  8889888888    65543

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=98.96  E-value=2.9e-09  Score=59.48  Aligned_cols=50  Identities=14%  Similarity=0.160  Sum_probs=44.8

Q ss_pred             HHHHHHHHHHhhhhCCCCCC---cccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSG---TIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G---~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~   86 (87)
                      +..++.++.+|+.|| +++|   +|+.+||+.+|+.     +|..++..+++.+|+.++
T Consensus         5 e~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D   62 (92)
T 3rm1_A            5 EKAVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLD   62 (92)
T ss_dssp             HHHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHc
Confidence            356788999999999 6666   9999999999999     999999999999999875

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=98.95  E-value=5.8e-10  Score=63.47  Aligned_cols=47  Identities=6%  Similarity=0.022  Sum_probs=42.4

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +.++++.+|+.||.|++|+|+.+|++.+|+.+|  ++.+++..+|+.++
T Consensus         9 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~--l~~~~l~~i~~~~D   55 (99)
T 1qjt_A            9 GNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLAD   55 (99)
T ss_dssp             TCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcC--CCHHHHHHHHHHHC
Confidence            356799999999999999999999999999887  68999999998875

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=98.95  E-value=2.7e-09  Score=60.08  Aligned_cols=51  Identities=14%  Similarity=0.185  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHhhhhC-CCCC-CcccHHHHHHHHHH-hC----CCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFD-TDGS-GTIDAKELNVAMRA-LG----FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D-~d~~-G~I~~~el~~~l~~-lg----~~~~~~ei~~li~~~~   86 (87)
                      +..+++++++|+.|| .|++ |+|+.+||+.+|+. +|    ..++..+++.+|++++
T Consensus         6 e~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D   63 (93)
T 4eto_A            6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLD   63 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHC
Confidence            456789999999998 6774 89999999999996 65    4568999999999875

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=98.94  E-value=2.4e-09  Score=65.00  Aligned_cols=55  Identities=42%  Similarity=0.602  Sum_probs=49.1

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++++..++.+|..||.|++|.|+.+||..+|+.+|..++..++..++..++
T Consensus         3 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D   57 (179)
T 2f2o_A            3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD   57 (179)
T ss_dssp             ---CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Confidence            4577888999999999999999999999999999999999999999999988764

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=98.92  E-value=4.8e-09  Score=63.01  Aligned_cols=53  Identities=23%  Similarity=0.406  Sum_probs=49.7

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC-CCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF-EMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~-~~~~~ei~~li~~   84 (87)
                      ..++++++..++.+|..||.|++|+|+.+||..+|+.+|. .++..++..++..
T Consensus        17 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~   70 (166)
T 2mys_B           17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE   70 (166)
T ss_pred             hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence            4788999999999999999999999999999999999999 9999999988864

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=98.92  E-value=3.2e-09  Score=60.13  Aligned_cols=50  Identities=26%  Similarity=0.494  Sum_probs=45.9

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh---CCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l---g~~~~~~ei~~li~~~~   86 (87)
                      ...+.++.+|+.||.|++|+|+.+||+.+|+.+   |..++.++++.+++.++
T Consensus        38 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D   90 (109)
T 5pal_A           38 KTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGD   90 (109)
T ss_dssp             CCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHC
T ss_pred             CcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            346789999999999999999999999999999   99999999999998764

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=98.92  E-value=3.4e-09  Score=62.72  Aligned_cols=50  Identities=22%  Similarity=0.208  Sum_probs=46.1

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC-CCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF-EMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~-~~~~~ei~~li~~~~   86 (87)
                      ...+.++.+|+.||.|++|+|+.+||+.+|..+|. .++.++++.++..++
T Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D   87 (135)
T 3h4s_E           37 EFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGD   87 (135)
T ss_dssp             HHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHC
T ss_pred             chHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhC
Confidence            45678999999999999999999999999999995 999999999998875

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=98.91  E-value=3.5e-09  Score=60.01  Aligned_cols=50  Identities=24%  Similarity=0.366  Sum_probs=45.9

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh---CCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l---g~~~~~~ei~~li~~~~   86 (87)
                      ...+.++.+|+.||.|++|+|+.+||+.+|+.+   |..++.++++.+++.++
T Consensus        39 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D   91 (109)
T 1bu3_A           39 KSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGD   91 (109)
T ss_dssp             SCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhC
Confidence            346789999999999999999999999999999   88899999999998774

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=98.91  E-value=3.7e-09  Score=59.81  Aligned_cols=50  Identities=20%  Similarity=0.421  Sum_probs=45.8

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh---CCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l---g~~~~~~ei~~li~~~~   86 (87)
                      ...+.++.+|+.||.|++|+|+.+||+.+|+.+   |..++.++++.+++.++
T Consensus        38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D   90 (109)
T 1rwy_A           38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGD   90 (109)
T ss_dssp             SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHC
T ss_pred             chHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHC
Confidence            356789999999999999999999999999999   88899999999998764

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=98.90  E-value=2.3e-09  Score=58.76  Aligned_cols=51  Identities=18%  Similarity=0.285  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHhhhhC-CCCCC-cccHHHHHHHHHH---hCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFD-TDGSG-TIDAKELNVAMRA---LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D-~d~~G-~I~~~el~~~l~~---lg~~~~~~ei~~li~~~~   86 (87)
                      ++.++.++.+|+.|| ++++| +|+.+||+.+|+.   +|..++..+++.+++.++
T Consensus         6 ~~~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D   61 (90)
T 1k8u_A            6 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLD   61 (90)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhC
Confidence            345678999999999 69999 9999999999998   998899999999998764

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=98.90  E-value=6.7e-09  Score=61.47  Aligned_cols=49  Identities=35%  Similarity=0.535  Sum_probs=45.2

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..+.++.+|+.||.+++|+|+.+||+.+|..+|..++.++++.++..++
T Consensus        81 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d  129 (148)
T 1exr_A           81 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREAD  129 (148)
T ss_dssp             HHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            3467889999999999999999999999999999999999999998864

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=98.90  E-value=1.5e-09  Score=61.61  Aligned_cols=51  Identities=22%  Similarity=0.452  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh---CCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l---g~~~~~~ei~~li~~~~   86 (87)
                      ....+.++.+|+.||.|++|+|+.+||..+|..+   |..++.++++.+++.++
T Consensus        38 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d   91 (110)
T 1pva_A           38 AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAAD   91 (110)
T ss_dssp             TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHC
T ss_pred             cchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhC
Confidence            3457789999999999999999999999999999   78899999999998764

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=98.88  E-value=8.1e-10  Score=58.76  Aligned_cols=48  Identities=29%  Similarity=0.448  Sum_probs=44.3

Q ss_pred             HHHHHHHhhhh-CCCCC-CcccHHHHHHHHHHhCCCC--CHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELF-DTDGS-GTIDAKELNVAMRALGFEM--TEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~-D~d~~-G~I~~~el~~~l~~lg~~~--~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.| |.+++ |+|+.+||..+|+.+|..+  +.++++.++..++
T Consensus         4 ~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D   55 (76)
T 1qx2_A            4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVD   55 (76)
T ss_dssp             HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHC
T ss_pred             HHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhC
Confidence            56799999999 99999 9999999999999999988  9899999998764

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=98.88  E-value=3.9e-09  Score=62.79  Aligned_cols=55  Identities=38%  Similarity=0.528  Sum_probs=51.4

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++++..++.+|..+|.|++|.|+..||..+|..+|..++..++..++..++
T Consensus        12 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d   66 (162)
T 1top_A           12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVD   66 (162)
T ss_dssp             HHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             hhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999999999999999999988764

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=98.88  E-value=3e-09  Score=60.17  Aligned_cols=50  Identities=22%  Similarity=0.372  Sum_probs=45.8

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh---CCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l---g~~~~~~ei~~li~~~~   86 (87)
                      ...+.++.+|+.||.|++|+|+.+||..+|+.+   |..++.++++.++..++
T Consensus        38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D   90 (108)
T 2pvb_A           38 KSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGD   90 (108)
T ss_dssp             SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhC
Confidence            346789999999999999999999999999999   88899999999998874

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=98.87  E-value=2.9e-09  Score=59.48  Aligned_cols=50  Identities=24%  Similarity=0.329  Sum_probs=43.3

Q ss_pred             HHHHHHHHHHhhhhC-CCCCC-cccHHHHHHHHHH---hCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFD-TDGSG-TIDAKELNVAMRA---LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D-~d~~G-~I~~~el~~~l~~---lg~~~~~~ei~~li~~~~   86 (87)
                      ++++..++.+|+.|| .|++| +|+.+||+.+|+.   +|. ++..+++.+|+.++
T Consensus         6 ~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~-~~~~~i~~~~~~~D   60 (92)
T 2kax_A            6 EKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGE-MKESSIDDLMKSLD   60 (92)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTT-TCCTTHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCC-CCHHHHHHHHHHhC
Confidence            456788999999999 99999 9999999999997   334 78889999998875

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=98.86  E-value=3.4e-09  Score=60.04  Aligned_cols=50  Identities=22%  Similarity=0.379  Sum_probs=45.8

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh---CCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l---g~~~~~~ei~~li~~~~   86 (87)
                      ...+.++.+|+.||.|++|+|+.+||+.+|..+   |..++.++++.+++.++
T Consensus        39 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D   91 (109)
T 3fs7_A           39 KTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGD   91 (109)
T ss_dssp             CCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHC
T ss_pred             CcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhC
Confidence            346789999999999999999999999999999   88999999999998764

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=98.86  E-value=7.7e-09  Score=59.90  Aligned_cols=51  Identities=16%  Similarity=0.163  Sum_probs=44.3

Q ss_pred             HHHHHHHHHHhhhhC-CCCCC-cccHHHHHHHHH-HhCCC-----CCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFD-TDGSG-TIDAKELNVAMR-ALGFE-----MTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D-~d~~G-~I~~~el~~~l~-~lg~~-----~~~~ei~~li~~~~   86 (87)
                      +++++.|+.+|+.|| +|++| +|+.+||+.+|+ .+|..     ++..+++.+|+.++
T Consensus         8 ~~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D   66 (113)
T 1xk4_C            8 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLD   66 (113)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhC
Confidence            445788999999999 49999 999999999999 78853     58899999998875

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=98.84  E-value=1.1e-08  Score=61.30  Aligned_cols=55  Identities=27%  Similarity=0.445  Sum_probs=50.9

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++++..++.+|..+|.+++|+|+.+|+..+|..+|..++..++..++..++
T Consensus        19 ~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d   73 (166)
T 2aao_A           19 ESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAAD   73 (166)
T ss_dssp             HHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHC
T ss_pred             HhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            3578899999999999999999999999999999999999999999999988764

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=98.84  E-value=6e-09  Score=62.92  Aligned_cols=49  Identities=12%  Similarity=0.001  Sum_probs=44.4

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++.++++.+|+.|| |++|+|+.+||+.+|+.+|  ++..++.+||+.++
T Consensus        46 ~~~e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~g--l~~~el~~I~~~~D   94 (139)
T 2jq6_A           46 VGKDKPTYDEIFYTLS-PVNGKITGANAKKEMVKSK--LPNTVLGKIWKLAD   94 (139)
T ss_dssp             GGGTHHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHC
T ss_pred             ChHHHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhC--cCHHHHHHHHHHhC
Confidence            3467889999999999 9999999999999999977  78999999998875

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=98.84  E-value=6.6e-10  Score=65.72  Aligned_cols=54  Identities=33%  Similarity=0.426  Sum_probs=42.0

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ..++++++.+++.+|..||.+++|+|+.+||..+|+.+|..++..++..++..+
T Consensus         2 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~   55 (151)
T 1w7j_B            2 IEFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNP   55 (151)
T ss_dssp             ---------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCC
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence            357888899999999999999999999999999999999999999998887543

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=98.84  E-value=3.3e-09  Score=61.16  Aligned_cols=51  Identities=10%  Similarity=0.135  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHhhhhC-CCCC-CcccHHHHHHHHHH-hCCCCC-HHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFD-TDGS-GTIDAKELNVAMRA-LGFEMT-EEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D-~d~~-G~I~~~el~~~l~~-lg~~~~-~~ei~~li~~~~   86 (87)
                      ++++++++.+|+.|| .|++ |+|+.+||+.+|+. +|..++ ..+++.+|++++
T Consensus        18 e~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D   72 (106)
T 2h2k_A           18 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLD   72 (106)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHC
Confidence            445788999999999 7986 79999999999986 775543 478999998875

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=98.83  E-value=1e-08  Score=60.39  Aligned_cols=47  Identities=17%  Similarity=0.356  Sum_probs=44.0

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ...++.+|+.||.|++|+|+.+||+.+|..+|..++.++++.++..+
T Consensus        83 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~  129 (146)
T 2qac_A           83 VEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF  129 (146)
T ss_dssp             HHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc
Confidence            56799999999999999999999999999999999999999999865

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=98.82  E-value=8.3e-09  Score=60.27  Aligned_cols=49  Identities=27%  Similarity=0.450  Sum_probs=45.5

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ....++.+|+.||.|++|+|+.+||+.+|..+|..++.++++.++..++
T Consensus        74 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d  122 (140)
T 1ggw_A           74 DPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVP  122 (140)
T ss_dssp             CHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhcc
Confidence            3577999999999999999999999999999999999999999998765

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=98.82  E-value=5.6e-09  Score=65.10  Aligned_cols=54  Identities=19%  Similarity=0.338  Sum_probs=45.5

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++.+++..++.+|..||.|++|+|+.+||..+|+.+|..++..++..++..++
T Consensus        50 ~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D  103 (197)
T 3pm8_A           50 HLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDID  103 (197)
T ss_dssp             HCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC--
T ss_pred             HCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            578999999999999999999999999999999999999999999999987653

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=98.82  E-value=3.8e-09  Score=62.41  Aligned_cols=51  Identities=16%  Similarity=0.190  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHhC
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIVE   87 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~e   87 (87)
                      +..++.++.+|+.||.| +|+|+..||+.+|+.     +|...+.++++.+|++++.
T Consensus        11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~   66 (121)
T 4drw_A           11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQ   66 (121)
T ss_dssp             HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcC
Confidence            45678999999999988 799999999999987     7888999999999998863

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=98.81  E-value=2e-09  Score=66.67  Aligned_cols=55  Identities=33%  Similarity=0.418  Sum_probs=50.0

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++++..++.+|..||.|++|.|+.+||..+|+.+|..++..++..++..++
T Consensus         2 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D   56 (188)
T 1s6i_A            2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAAD   56 (188)
T ss_dssp             CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcC
Confidence            4567777888999999999999999999999999999999999999999998764

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=98.81  E-value=9.3e-10  Score=57.10  Aligned_cols=45  Identities=16%  Similarity=0.202  Sum_probs=40.8

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++.+|+.||.|++|+|+.+|+..+|+.+|..++.++++.+++.++
T Consensus         2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D   46 (66)
T 3li6_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSID   46 (66)
T ss_dssp             CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHC
Confidence            467899999999999999999999999998888899999988764

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=98.81  E-value=5.1e-09  Score=59.20  Aligned_cols=50  Identities=26%  Similarity=0.400  Sum_probs=45.4

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh---CCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l---g~~~~~~ei~~li~~~~   86 (87)
                      ...+.++.+|+.||.|++|+|+.+||+.+|..+   |..++..+++.+++.++
T Consensus        38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D   90 (108)
T 1rro_A           38 MSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAAD   90 (108)
T ss_dssp             SCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHC
T ss_pred             ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHhC
Confidence            346789999999999999999999999999998   68899999999998864

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=98.81  E-value=1.5e-09  Score=60.44  Aligned_cols=51  Identities=8%  Similarity=0.104  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHhhhhCC-CCCC-cccHHHHHHHH-HHhCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDT-DGSG-TIDAKELNVAM-RALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~-d~~G-~I~~~el~~~l-~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++.++.++.+|+.||. |++| +|+.+||+.+| +.+|..++..+++.+++.++
T Consensus         6 ~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D   59 (93)
T 1xk4_A            6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELD   59 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhC
Confidence            3456789999999999 9999 99999999999 78887666677888888764

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=98.80  E-value=5.2e-09  Score=66.46  Aligned_cols=57  Identities=18%  Similarity=0.221  Sum_probs=52.8

Q ss_pred             cCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           30 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        30 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ....++.++...++.+|+.+|.|++|+|+.+||..+|+.+|..++..+++.+++.++
T Consensus        41 ~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D   97 (220)
T 3sjs_A           41 LLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFD   97 (220)
T ss_dssp             GGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHC
T ss_pred             HHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            345799999999999999999999999999999999999999999999999998764

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=98.80  E-value=1.4e-08  Score=62.26  Aligned_cols=55  Identities=15%  Similarity=0.085  Sum_probs=47.6

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHH-----HHHHHhCCCCCHH-----HHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELN-----VAMRALGFEMTEE-----HGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~-----~~l~~lg~~~~~~-----ei~~li~~~~   86 (87)
                      .-++++++..++.+|..||.|++|+|+.+||.     .+|+.+|..++..     ++..++..++
T Consensus        12 ~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D   76 (195)
T 1qv0_A           12 DFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCG   76 (195)
T ss_dssp             CTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcC
Confidence            44699999999999999999999999999999     7899999988776     5777776653

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=98.80  E-value=1.1e-08  Score=60.75  Aligned_cols=48  Identities=13%  Similarity=0.287  Sum_probs=44.4

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.+++|+|+.+||+.+|..+|..++.++++.+++.++
T Consensus        86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d  133 (156)
T 1wdc_B           86 EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP  133 (156)
T ss_dssp             HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcC
Confidence            457899999999999999999999999999999999999999998764

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=98.80  E-value=1.6e-08  Score=59.13  Aligned_cols=48  Identities=23%  Similarity=0.348  Sum_probs=44.6

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.+++|+|+.+||+.+|..+|..++.++++.++..++
T Consensus        78 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d  125 (142)
T 2bl0_C           78 EDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE  125 (142)
T ss_dssp             HHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            557899999999999999999999999999999999999999998763

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=98.79  E-value=1.5e-08  Score=60.86  Aligned_cols=48  Identities=25%  Similarity=0.298  Sum_probs=44.6

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.|++|+|+.+||+.+|..+|..++.++++.++..++
T Consensus        94 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D  141 (166)
T 2mys_B           94 EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFP  141 (166)
T ss_pred             HHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999999999998764

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=98.79  E-value=1e-08  Score=63.56  Aligned_cols=54  Identities=20%  Similarity=0.322  Sum_probs=49.3

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++.+++..++.+|..||.|++|+|+.+||..+|+.+|..++ .++..++..++
T Consensus        44 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D   97 (191)
T 3k21_A           44 QQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQID   97 (191)
T ss_dssp             HHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHC
T ss_pred             HHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhC
Confidence            3578889999999999999999999999999999999999988 88999888764

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=98.78  E-value=3.1e-08  Score=57.85  Aligned_cols=50  Identities=30%  Similarity=0.526  Sum_probs=45.5

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...+.++.+|+.||.+++|+|+.+|++.+|..+|..++.+++..++..++
T Consensus        81 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d  130 (147)
T 4ds7_A           81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS  130 (147)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS
T ss_pred             CcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Confidence            34467899999999999999999999999999999999999999998763

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=98.78  E-value=1e-08  Score=61.66  Aligned_cols=47  Identities=17%  Similarity=0.355  Sum_probs=42.7

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHH----HHHHhCCCCCHHHHHH
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNV----AMRALGFEMTEEHGIV   80 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~----~l~~lg~~~~~~ei~~   80 (87)
                      ++++++.+++.+|..||.|++|+|+.+||..    +++.+|..++..++..
T Consensus         1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~   51 (176)
T 1nya_A            1 TTAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQT   51 (176)
T ss_dssp             CCSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHH
T ss_pred             CcHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHH
Confidence            4667899999999999999999999999999    7888999999988873

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=98.78  E-value=3.3e-08  Score=59.25  Aligned_cols=49  Identities=39%  Similarity=0.555  Sum_probs=45.3

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ....++.+|+.||.|++|+|+.+||..+|..+|..++.++++.+++.++
T Consensus        99 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D  147 (169)
T 3qrx_A           99 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEAD  147 (169)
T ss_dssp             HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            3567889999999999999999999999999999999999999998874

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=98.78  E-value=6.3e-09  Score=60.90  Aligned_cols=48  Identities=25%  Similarity=0.353  Sum_probs=44.8

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.|++|+|+.+||+.+|..+|..++.++++.++..++
T Consensus        75 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D  122 (143)
T 3j04_B           75 EDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAP  122 (143)
T ss_dssp             HHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999999999998864

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=98.77  E-value=9.5e-09  Score=63.46  Aligned_cols=47  Identities=13%  Similarity=0.155  Sum_probs=43.2

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh----CCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL----GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l----g~~~~~~ei~~li~~~~   86 (87)
                      ..+|+.+|+.|| |++|+|+.+||+.+|+.+    |..++.++++.++..++
T Consensus        75 ~~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d  125 (174)
T 2i7a_A           75 LVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS  125 (174)
T ss_dssp             HHHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc
Confidence            457899999999 999999999999999999    99999999999998763

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=98.76  E-value=3.4e-08  Score=56.29  Aligned_cols=51  Identities=8%  Similarity=0.090  Sum_probs=41.8

Q ss_pred             HHHHHHHHHHhhhhCCCC---CCcccHHHHHHHHHHh-CCCCC----HHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDG---SGTIDAKELNVAMRAL-GFEMT----EEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~---~G~I~~~el~~~l~~l-g~~~~----~~ei~~li~~~~   86 (87)
                      +..+++|+++|+.||.++   +|+|+.+||+.+|+.+ |..++    ..+++.+|++++
T Consensus         7 e~~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D   65 (100)
T 3nxa_A            7 EKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLD   65 (100)
T ss_dssp             HHHHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhC
Confidence            456789999999999964   7999999999999874 44444    678999998875

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=98.76  E-value=1.9e-08  Score=59.72  Aligned_cols=48  Identities=35%  Similarity=0.510  Sum_probs=44.8

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.+++|+|+.+||..+|..+|..++.+++..++..++
T Consensus        95 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d  142 (161)
T 3fwb_A           95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFD  142 (161)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            567899999999999999999999999999999999999999998764

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=98.76  E-value=1.7e-08  Score=58.92  Aligned_cols=48  Identities=31%  Similarity=0.500  Sum_probs=43.2

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      +++++   ++.+|..+|.|++|+|+.+||..+|+.+|..++..++..++..
T Consensus         2 ls~~e---l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~   49 (145)
T 2bl0_B            2 ASADQ---IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ   49 (145)
T ss_dssp             CCHHH---HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             CCHHH---HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh
Confidence            44444   9999999999999999999999999999999999999988763

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=98.76  E-value=3.1e-08  Score=58.12  Aligned_cols=48  Identities=35%  Similarity=0.572  Sum_probs=44.8

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHH-hCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRA-LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.+++|+|+.+||+.+|.. +|..++..++..++..++
T Consensus        87 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d  135 (153)
T 3ox6_A           87 VKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVD  135 (153)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhC
Confidence            567899999999999999999999999999 899999999999998774

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=98.75  E-value=1.2e-08  Score=59.56  Aligned_cols=50  Identities=28%  Similarity=0.436  Sum_probs=45.5

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .....++.+|+.||.|++|+|+.+||+.+|..+|..++.++++.++..++
T Consensus        73 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d  122 (145)
T 2bl0_B           73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVS  122 (145)
T ss_dssp             GGHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC
T ss_pred             ccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcC
Confidence            45678999999999999999999999999999999999999999987653

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=98.75  E-value=1.1e-08  Score=60.20  Aligned_cols=48  Identities=21%  Similarity=0.434  Sum_probs=44.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.|++|+|+.+||+.+|..+|..++.+++..++..++
T Consensus        82 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d  129 (148)
T 1m45_A           82 TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVE  129 (148)
T ss_dssp             THHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            367899999999999999999999999999999999999999987653

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=98.75  E-value=2e-08  Score=59.60  Aligned_cols=46  Identities=30%  Similarity=0.450  Sum_probs=43.7

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ...++.+|+.||.+++|+|+.+||+.+|..+|..++.+++..++..
T Consensus        83 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~  128 (156)
T 1wdc_C           83 FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKL  128 (156)
T ss_dssp             HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            5678999999999999999999999999999999999999999987

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=98.74  E-value=1.2e-08  Score=63.10  Aligned_cols=49  Identities=12%  Similarity=0.326  Sum_probs=43.8

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHH-HhCCC-C------CHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMR-ALGFE-M------TEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-~lg~~-~------~~~ei~~li~~~~   86 (87)
                      ..+.++.+|+.||.|++|+|+.+||+.+|+ .+|.+ +      +.++++.+|..++
T Consensus        96 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D  152 (179)
T 3a8r_A           96 FDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELD  152 (179)
T ss_dssp             HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhC
Confidence            456899999999999999999999999999 88877 6      7888999998875

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=98.74  E-value=2e-08  Score=70.11  Aligned_cols=48  Identities=40%  Similarity=0.585  Sum_probs=45.3

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++++.+|+.||.|++|+|+.+||+.+|..+|..++.++++.||+.++
T Consensus       374 eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D  421 (440)
T 3u0k_A          374 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD  421 (440)
T ss_dssp             CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            467999999999999999999999999999999999999999999875

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=98.74  E-value=8.5e-09  Score=60.71  Aligned_cols=51  Identities=14%  Similarity=0.145  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHhhhhCCCC-CCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDG-SGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~-~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+++.+++.+|..||.|+ +|+|+.+||..+|+.+|..++..++..++..++
T Consensus        10 ~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d   61 (146)
T 2qac_A           10 LEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYG   61 (146)
T ss_dssp             HHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            345667999999999999 999999999999999999999999999988764

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=98.72  E-value=2.7e-08  Score=58.27  Aligned_cols=48  Identities=31%  Similarity=0.445  Sum_probs=44.1

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      .....++.+|+.||.+++|+|+.+||+.+|..+|..++.+++..++..
T Consensus        82 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~  129 (149)
T 2mys_C           82 GTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG  129 (149)
T ss_pred             chHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh
Confidence            345679999999999999999999999999999999999999999875

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=98.72  E-value=1.1e-08  Score=60.75  Aligned_cols=49  Identities=35%  Similarity=0.542  Sum_probs=45.7

Q ss_pred             CCCHHHHHHHHHHhhhhCC--CCCCcccHHHHHHHHHHhCCCCCHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDT--DGSGTIDAKELNVAMRALGFEMTEEHGIVL   81 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~--d~~G~I~~~el~~~l~~lg~~~~~~ei~~l   81 (87)
                      .++++++..++.+|..||.  +++|+|+.+||..+|+.+|..++..++..+
T Consensus         2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l   52 (156)
T 1wdc_C            2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV   52 (156)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH
Confidence            4788999999999999999  999999999999999999999999888876

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=98.72  E-value=3e-08  Score=60.44  Aligned_cols=55  Identities=15%  Similarity=0.137  Sum_probs=48.0

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHH-----HHHHHhCCCCCHH-----HHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELN-----VAMRALGFEMTEE-----HGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~-----~~l~~lg~~~~~~-----ei~~li~~~~   86 (87)
                      .-++++++.+++.+|..||.|++|+|+.+||.     .+|+.+|..++..     ++..+++.++
T Consensus         8 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D   72 (191)
T 1uhk_A            8 DFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAG   72 (191)
T ss_dssp             CTTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhC
Confidence            44588999999999999999999999999999     8999999988877     5777777653

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=98.71  E-value=3.3e-08  Score=58.69  Aligned_cols=48  Identities=27%  Similarity=0.459  Sum_probs=44.4

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.+++|+|+.+||+.+|..+|..++.+++..++..++
T Consensus        90 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D  137 (158)
T 2jnf_A           90 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEID  137 (158)
T ss_dssp             SSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhC
Confidence            345899999999999999999999999999999999999999998874

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=98.71  E-value=3.3e-09  Score=60.31  Aligned_cols=50  Identities=12%  Similarity=0.082  Sum_probs=42.7

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH-----hCC--CCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRA-----LGF--EMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-----lg~--~~~~~ei~~li~~~~   86 (87)
                      ++++++++.+|+.||.+ +|+|+.+||+.+|+.     +|.  .++..+++.+|++++
T Consensus         6 ~~~~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D   62 (100)
T 1psr_A            6 ERSIIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKD   62 (100)
T ss_dssp             HHHHHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHC
T ss_pred             HHHHHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhC
Confidence            45678999999999976 799999999999987     565  677788999988875

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=98.71  E-value=6.2e-09  Score=61.45  Aligned_cols=47  Identities=30%  Similarity=0.483  Sum_probs=42.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ...++.+|+.||.+++|+|+.+||+.+|..+|..++.+++..++..+
T Consensus        86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~  132 (151)
T 1w7j_B           86 YEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGH  132 (151)
T ss_dssp             --CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhc
Confidence            45678899999999999999999999999999999999999998754

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=98.71  E-value=5.6e-08  Score=59.49  Aligned_cols=51  Identities=20%  Similarity=0.389  Sum_probs=47.5

Q ss_pred             CCCCHHHHHHHHHHhhhh-CCCCCCcccHHHHHHHHHHh----CCCCCHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELF-DTDGSGTIDAKELNVAMRAL----GFEMTEEHGIVLV   82 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~l----g~~~~~~ei~~li   82 (87)
                      ..++..+..+++.+|..| |.|++|+|+.+||..+++.+    |..++..++..++
T Consensus         4 ~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~   59 (191)
T 2ccm_A            4 HQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEAR   59 (191)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHH
T ss_pred             hhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHH
Confidence            567889999999999999 99999999999999999998    9999988888887

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=98.71  E-value=5.4e-08  Score=58.44  Aligned_cols=47  Identities=30%  Similarity=0.474  Sum_probs=43.6

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ...++.+|+.||.|++|+|+.+||+.+|..+|..++.++++.++..+
T Consensus        69 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~  115 (165)
T 1k94_A           69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY  115 (165)
T ss_dssp             HHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence            36789999999999999999999999999999999999999998764

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=98.71  E-value=5.3e-08  Score=57.78  Aligned_cols=49  Identities=33%  Similarity=0.449  Sum_probs=45.3

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ....++.+|+.||.+++|+|+.+||+.+|..+|..++.+++..++..++
T Consensus        94 ~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d  142 (162)
T 1top_A           94 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD  142 (162)
T ss_dssp             HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            4567899999999999999999999999999999999999999998764

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=98.71  E-value=9.6e-09  Score=57.94  Aligned_cols=50  Identities=14%  Similarity=0.151  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~   86 (87)
                      ++++++++.+|+.||. ++|+|+.+||+.+|+.     +|..++..+++.+|+.++
T Consensus         5 ~~~~~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D   59 (96)
T 1a4p_A            5 EHAMETMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLD   59 (96)
T ss_dssp             HHHHHHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhC
Confidence            4567899999999994 5679999999999987     677788899999998875

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=98.71  E-value=2.4e-09  Score=57.13  Aligned_cols=49  Identities=18%  Similarity=0.227  Sum_probs=42.8

Q ss_pred             HHHHHHHHhhhhCC-CCCC-cccHHHHHHHHHH-hCCCC-CHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDT-DGSG-TIDAKELNVAMRA-LGFEM-TEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~-d~~G-~I~~~el~~~l~~-lg~~~-~~~ei~~li~~~~   86 (87)
                      ..+.++.+|..||. |++| +|+.+||+.+|+. +|..+ +..+++.++..++
T Consensus         5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D   57 (78)
T 1cb1_A            5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELD   57 (78)
T ss_dssp             CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTC
T ss_pred             HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhc
Confidence            46789999999999 9999 9999999999986 88777 7788888887764

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=98.70  E-value=1.1e-08  Score=63.67  Aligned_cols=51  Identities=18%  Similarity=0.244  Sum_probs=41.5

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC--CCCHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF--EMTEEHGIVLV   82 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~--~~~~~ei~~li   82 (87)
                      ..++++++.+++.+|..||.|++|+|+.+||..+|+.+|.  .++..++..++
T Consensus        28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~   80 (208)
T 2hpk_A           28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMR   80 (208)
T ss_dssp             --------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHH
T ss_pred             HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHH
Confidence            6788889999999999999999999999999999999998  89999999998

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=98.69  E-value=5.5e-08  Score=60.25  Aligned_cols=50  Identities=26%  Similarity=0.454  Sum_probs=46.0

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHHHH
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL-GFEMTEEHGIVLVCT   84 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-g~~~~~~ei~~li~~   84 (87)
                      .......++.+|+.||.|++|+|+.+||..+|..+ |..++.++++.++..
T Consensus       109 ~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~  159 (202)
T 2bec_A          109 LNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADR  159 (202)
T ss_dssp             TTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence            34567789999999999999999999999999999 999999999999987

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=98.68  E-value=2.4e-08  Score=62.01  Aligned_cols=47  Identities=15%  Similarity=0.163  Sum_probs=43.2

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.|++|+|+.+||+.+| .+|..++.+++..+|..++
T Consensus       125 ~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D  171 (196)
T 3dtp_E          125 EDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAP  171 (196)
T ss_dssp             HHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSC
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcC
Confidence            4578999999999999999999999999 9999999999999998653

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=98.67  E-value=2.7e-08  Score=66.74  Aligned_cols=55  Identities=16%  Similarity=0.183  Sum_probs=51.4

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++++..++.+|..||.|++|+|+.+||..+|..+|..++..++..++..++
T Consensus       114 ~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D  168 (323)
T 1ij5_A          114 PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVE  168 (323)
T ss_dssp             CCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHH
T ss_pred             HhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Confidence            5789999999999999999999999999999999999999999999999987664

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=98.67  E-value=7.4e-08  Score=58.30  Aligned_cols=49  Identities=39%  Similarity=0.574  Sum_probs=43.0

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ....++.+|+.||.|++|+|+.+||+.+|..+|..++.+++..++..++
T Consensus        82 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D  130 (179)
T 2f2o_A           82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD  130 (179)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcC
Confidence            3456899999999999999999999999999999999999999998764

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=98.66  E-value=3.6e-08  Score=60.83  Aligned_cols=52  Identities=21%  Similarity=0.310  Sum_probs=42.0

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++..++.+|..||.|++|+|+.+||..+|+.+|..++..++..++..++
T Consensus        32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D   83 (204)
T 3e3r_A           32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWD   83 (204)
T ss_dssp             --------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHC
T ss_pred             CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Confidence            4566788999999999999999999999999999999999999999998764

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=98.66  E-value=8.2e-08  Score=59.86  Aligned_cols=48  Identities=23%  Similarity=0.416  Sum_probs=43.6

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHH----HHHH
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRAL-GFEMTEEHGIVL----VCTI   85 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-g~~~~~~ei~~l----i~~~   85 (87)
                      ..+.++.+|+.||.|++|+|+.+||+.+|..+ |..++.++++.+    +..+
T Consensus       111 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~  163 (208)
T 2ct9_A          111 RSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEA  163 (208)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHh
Confidence            56789999999999999999999999999997 999999999988    5554

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=98.65  E-value=6.6e-08  Score=61.32  Aligned_cols=48  Identities=21%  Similarity=0.331  Sum_probs=44.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.|++|+|+.+||+.+|..+|..++.++++.+++.++
T Consensus       116 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d  163 (220)
T 3sjs_A          116 MELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA  163 (220)
T ss_dssp             HHHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc
Confidence            356889999999999999999999999999999999999999998763

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=98.65  E-value=3.1e-08  Score=62.56  Aligned_cols=53  Identities=17%  Similarity=0.163  Sum_probs=46.8

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH-hCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRA-LGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..++.+|..||.|++|+|+.+||..+|.. +|..++..++..++..
T Consensus        40 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~   93 (219)
T 3cs1_A           40 REKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKR   93 (219)
T ss_dssp             CSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence            5689999999999999999999999999999999988 7988877777766553

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=98.64  E-value=3e-08  Score=55.32  Aligned_cols=50  Identities=14%  Similarity=0.119  Sum_probs=43.3

Q ss_pred             HHHHHHHHHhhhhC-CCCCC-cccHHHHHHHHH-Hh----CCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFD-TDGSG-TIDAKELNVAMR-AL----GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D-~d~~G-~I~~~el~~~l~-~l----g~~~~~~ei~~li~~~~   86 (87)
                      +.++.++.+|..|| .+++| +|+.+||+.+|+ .+    |..++..+++.++..++
T Consensus        10 ~~~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D   66 (99)
T 1qls_A           10 RCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLD   66 (99)
T ss_dssp             HHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhC
Confidence            45678999999998 99999 999999999998 44    46788899999998764

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=98.64  E-value=1.2e-07  Score=57.21  Aligned_cols=48  Identities=25%  Similarity=0.525  Sum_probs=44.4

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.|++|+|+.+|+..+|..+|..++..++..++..++
T Consensus        73 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d  120 (172)
T 2znd_A           73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFD  120 (172)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            456899999999999999999999999999999999999999998764

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=98.64  E-value=6.2e-08  Score=59.01  Aligned_cols=43  Identities=21%  Similarity=0.248  Sum_probs=41.0

Q ss_pred             HHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           44 EAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        44 ~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+|+.||.|++|+|+.+||+.+|..+|..++.++++.++..++
T Consensus       113 ~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D  155 (191)
T 1uhk_A          113 ALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCD  155 (191)
T ss_dssp             HHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSC
T ss_pred             HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            8999999999999999999999999999999999999998764

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=98.64  E-value=7.8e-08  Score=57.92  Aligned_cols=47  Identities=28%  Similarity=0.461  Sum_probs=43.3

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ...++.+|+.||.|++|+|+.+||..+|..+|..++.++++.++..+
T Consensus        71 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~  117 (167)
T 1gjy_A           71 LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY  117 (167)
T ss_dssp             HHHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence            35788999999999999999999999999999999999999998764

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=98.63  E-value=2.3e-08  Score=61.84  Aligned_cols=48  Identities=35%  Similarity=0.446  Sum_probs=43.7

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..+++.+|..||.|++|.|+.+||..+|..+|..++..++..++..++
T Consensus        26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D   73 (191)
T 1y1x_A           26 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYD   73 (191)
T ss_dssp             TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            456999999999999999999999999988888999999999998764

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=98.63  E-value=9.1e-08  Score=57.79  Aligned_cols=48  Identities=23%  Similarity=0.389  Sum_probs=44.1

Q ss_pred             CCHHHHHHHHHHhhhh-CCCCCCcccHHHHHHHHHHhC----CCCCHHHHHHH
Q 048414           34 LSQQKKQEIKEAFELF-DTDGSGTIDAKELNVAMRALG----FEMTEEHGIVL   81 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~lg----~~~~~~ei~~l   81 (87)
                      +++++..+++.+|..| |.|++|+|+.+||..+|..++    ..++..++..+
T Consensus         2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l   54 (185)
T 2sas_A            2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSM   54 (185)
T ss_dssp             CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHH
Confidence            6788899999999999 999999999999999999988    88898888765

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=98.62  E-value=1.9e-08  Score=58.76  Aligned_cols=45  Identities=29%  Similarity=0.384  Sum_probs=41.0

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVC   83 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~   83 (87)
                      +.+++.+|..||.|++|+|+.+||..+|+.+|..++..++..++.
T Consensus         4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~   48 (140)
T 1ggw_A            4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES   48 (140)
T ss_dssp             CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh
Confidence            346899999999999999999999999999999999999888764

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=98.62  E-value=5.1e-08  Score=59.64  Aligned_cols=43  Identities=28%  Similarity=0.377  Sum_probs=37.0

Q ss_pred             HHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           44 EAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        44 ~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+|+.||.|++|+|+.+||+.+|..+|..++.++++.+++.++
T Consensus       117 ~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D  159 (195)
T 1qv0_A          117 AVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCD  159 (195)
T ss_dssp             HHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSC
T ss_pred             HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            8999999999999999999999999999999999999998764

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=98.62  E-value=3.6e-09  Score=62.29  Aligned_cols=47  Identities=28%  Similarity=0.450  Sum_probs=42.4

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      +.+++.+|..||.|++|+|+.+||..+|+.+|..++..++..++..+
T Consensus         3 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~   49 (148)
T 1m45_A            3 TRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINAD   49 (148)
T ss_dssp             CCCCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence            34578899999999999999999999999999999999999998765

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=98.62  E-value=1.1e-07  Score=58.77  Aligned_cols=47  Identities=23%  Similarity=0.451  Sum_probs=44.0

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++.+|+.||.|++|+|+.+||+.+|..+|..++.++++.++..++
T Consensus        93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D  139 (191)
T 1y1x_A           93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFD  139 (191)
T ss_dssp             HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            56889999999999999999999999999999999999999998874

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=98.61  E-value=9.9e-08  Score=57.30  Aligned_cols=47  Identities=17%  Similarity=0.198  Sum_probs=41.9

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC----CCCCHHH-HHHH
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG----FEMTEEH-GIVL   81 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg----~~~~~~e-i~~l   81 (87)
                      +++++.+++.+|..+|.|++|+|+.+||..+|+.+|    ..++..+ +..+
T Consensus         1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~   52 (174)
T 1q80_A            1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDS   52 (174)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHH
Confidence            467889999999999999999999999999999988    8899887 6543

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=98.61  E-value=1e-07  Score=59.04  Aligned_cols=47  Identities=30%  Similarity=0.472  Sum_probs=43.4

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ...++.+|+.||.|++|+|+.+||+.+|..+|..++.++++.++..+
T Consensus       102 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~  148 (198)
T 1juo_A          102 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY  148 (198)
T ss_dssp             HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence            35688999999999999999999999999999999999999998764

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=98.59  E-value=4e-08  Score=58.35  Aligned_cols=49  Identities=29%  Similarity=0.453  Sum_probs=43.3

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ....++.+|+.||.|++|+|+.+||+.+|..+|..++.+++..++..++
T Consensus        93 ~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D  141 (161)
T 1dtl_A           93 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGD  141 (161)
T ss_dssp             HHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            4567899999999999999999999999999999999999999998764

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=98.59  E-value=1.5e-07  Score=57.56  Aligned_cols=49  Identities=16%  Similarity=0.287  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++++..++.+|..+|.|++|+|+.+||..+|+.+|..  ..++..++..++
T Consensus        35 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~--~~~~~~~~~~~D   83 (180)
T 3mse_B           35 NNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQALD   83 (180)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC--HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC--HHHHHHHHHHhC
Confidence            7788999999999999999999999999999999864  688888888764

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=98.59  E-value=8.6e-08  Score=58.03  Aligned_cols=47  Identities=30%  Similarity=0.449  Sum_probs=43.4

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ...++.+|+.||.+++|+|+.+||..+|+.+|..++.++++.++..+
T Consensus        76 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~  122 (173)
T 1alv_A           76 IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRY  122 (173)
T ss_dssp             HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence            35688899999999999999999999999999999999999998875

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=98.58  E-value=6.1e-08  Score=62.00  Aligned_cols=53  Identities=23%  Similarity=0.347  Sum_probs=46.5

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHH----HhCC--CCCHHHHHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMR----ALGF--EMTEEHGIVLVCTI   85 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~----~lg~--~~~~~ei~~li~~~   85 (87)
                      .++..+.++++.+|..||.|++|+|+.+||..+|+    .+|.  .++..++..++..+
T Consensus         4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~   62 (272)
T 2be4_A            4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSF   62 (272)
T ss_dssp             CCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHH
T ss_pred             HHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence            45556677899999999999999999999999999    8999  99999998877554

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=98.58  E-value=1.5e-07  Score=66.13  Aligned_cols=55  Identities=42%  Similarity=0.602  Sum_probs=50.9

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++.+++++++.+|..||.|++|.|+.+||+.+|+.+|..++.++++.+++.++
T Consensus       304 ~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D  358 (450)
T 3sg6_A          304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD  358 (450)
T ss_dssp             -CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTC
T ss_pred             ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc
Confidence            4688999999999999999999999999999999999999999999999998764

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=98.57  E-value=3.4e-07  Score=55.91  Aligned_cols=51  Identities=20%  Similarity=0.262  Sum_probs=44.9

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +.......++.+|+.||.|++|+|+.+|+..+|..+|  ++.++++.+++.++
T Consensus       103 ~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g--~~~~~~~~~~~~~D  153 (191)
T 2ccm_A          103 LPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IPKSDCDAAFDTLS  153 (191)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--CCHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--CCHHHHHHHHHHhC
Confidence            3455567799999999999999999999999999988  88999999998875

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=98.56  E-value=2.4e-07  Score=55.02  Aligned_cols=45  Identities=22%  Similarity=0.365  Sum_probs=41.5

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++.+|+.||.|++|+|+.+|+..+|..+|  ++.+++..++..++
T Consensus        98 ~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~~~~~~~D  142 (166)
T 3akb_A           98 PFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALD  142 (166)
T ss_dssp             HHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHHHHHHHhC
Confidence            4589999999999999999999999999998  89999999998764

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=98.56  E-value=7.2e-08  Score=58.39  Aligned_cols=48  Identities=10%  Similarity=0.124  Sum_probs=43.7

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh-C-------CCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRAL-G-------FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-g-------~~~~~~ei~~li~~~~   86 (87)
                      ++.+++.+|..+| +++|.|+.+||..+|+.+ |       ..++..++..+++.++
T Consensus         2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D   57 (173)
T 1alv_A            2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMD   57 (173)
T ss_dssp             HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHC
T ss_pred             chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHc
Confidence            5788999999999 999999999999999998 6       7889999999998764

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=98.55  E-value=1.8e-07  Score=55.12  Aligned_cols=48  Identities=25%  Similarity=0.422  Sum_probs=44.0

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH-hCCCCCHHHHHHHHHH
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRA-LGFEMTEEHGIVLVCT   84 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-lg~~~~~~ei~~li~~   84 (87)
                      ...+.++.+|+.||.|++|+|+.+||+.+|.. +|..++..++..++..
T Consensus        72 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~  120 (155)
T 3ll8_B           72 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDK  120 (155)
T ss_dssp             CHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHH
Confidence            34577999999999999999999999999999 6999999999999987

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=98.55  E-value=4.6e-08  Score=62.14  Aligned_cols=55  Identities=22%  Similarity=0.259  Sum_probs=48.1

Q ss_pred             CCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHH-HHHHhCCCCCHHHHHHHHHHH
Q 048414           31 HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNV-AMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        31 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ...++++++.+++.+|..||.|++|+|+.+||.. +++.+|..++..++..++..+
T Consensus        42 ~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~   97 (226)
T 2lvv_A           42 PRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRA   97 (226)
T ss_dssp             CSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHH
T ss_pred             chhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence            3568999999999999999999999999999998 667789888877888877765

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=98.55  E-value=2.2e-07  Score=54.89  Aligned_cols=52  Identities=10%  Similarity=0.092  Sum_probs=46.8

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      -.++.++..+++++|+.+|. ++|+|+.++++.+|...|  ++.+++.+|++.++
T Consensus        25 W~it~ee~~~y~~iF~~lD~-~dG~Isg~elr~~~~~sg--Lp~~~L~~Iw~laD   76 (121)
T 3fia_A           25 WAITVEERAKHDQQFHSLKP-ISGFITGDQARNFFFQSG--LPQPVLAQIWALAD   76 (121)
T ss_dssp             SCCCHHHHHHHHHHHHHTCC-BTTBEEHHHHHHHHGGGC--CCHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHhCC-CCCeECHHHHHHHHHHcC--CCHHHHHHHHHHHc
Confidence            34899999999999999998 899999999999999875  57899999998775

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=98.54  E-value=6.2e-08  Score=58.54  Aligned_cols=49  Identities=18%  Similarity=0.181  Sum_probs=43.9

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALG-FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg-~~~~~~ei~~li~~~~   86 (87)
                      +..+++.+|..+|.|++|+|+.+||..+|+.+| ..++..++..++..++
T Consensus         5 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D   54 (172)
T 2znd_A            5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFD   54 (172)
T ss_dssp             -CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHC
T ss_pred             chhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhC
Confidence            456799999999999999999999999999998 7799999999988764

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=98.53  E-value=1.5e-07  Score=53.86  Aligned_cols=45  Identities=16%  Similarity=0.202  Sum_probs=39.9

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++.+|..+|.+++|+|+.+|+..+|..+|..++..++..+++.++
T Consensus         2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D   46 (134)
T 1jfj_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSID   46 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHc
Confidence            678899999999999999999999999998888888988887664

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.53  E-value=2.2e-07  Score=64.99  Aligned_cols=54  Identities=22%  Similarity=0.352  Sum_probs=49.0

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh--------CCCCCHHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL--------GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l--------g~~~~~~ei~~li~~~~   86 (87)
                      .++++++.+++++|..||.|++|+|+.+||..+|+.+        |...+..+++.+++.++
T Consensus       348 ~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D  409 (504)
T 3q5i_A          348 LTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVD  409 (504)
T ss_dssp             TSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHC
T ss_pred             CCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhC
Confidence            3488999999999999999999999999999999988        66788999999998775

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=98.52  E-value=9.2e-08  Score=57.17  Aligned_cols=46  Identities=24%  Similarity=0.314  Sum_probs=36.6

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC--------CCCCHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALG--------FEMTEEHGIVLVCT   84 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg--------~~~~~~ei~~li~~   84 (87)
                      .+.++.+|+.||.|++|+|+.+||..+|..++        ..++.+++..++..
T Consensus        67 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~  120 (143)
T 3a4u_B           67 QELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDG  120 (143)
T ss_dssp             HHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHH
Confidence            46789999999999999999999999998873        57899999888743

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=98.51  E-value=3.9e-08  Score=59.88  Aligned_cols=50  Identities=16%  Similarity=0.236  Sum_probs=44.8

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh------CCCCCHHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL------GFEMTEEHGIVLV   82 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l------g~~~~~~ei~~li   82 (87)
                      .++++++.+++.+|..||.|++|+|+.+||..+|+.+      |..++..++..++
T Consensus         7 ~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~   62 (186)
T 2hps_A            7 SERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFL   62 (186)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHH
Confidence            4577889999999999999999999999999999877      8888888888775

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=98.50  E-value=7.8e-08  Score=59.84  Aligned_cols=48  Identities=23%  Similarity=0.280  Sum_probs=41.9

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh--CCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL--GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l--g~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||..+|..+  |..++.++++.++..++
T Consensus       128 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D  177 (197)
T 3pm8_A          128 KEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVD  177 (197)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHc
Confidence            4578999999999999999999999999988  77888999999998874

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=98.49  E-value=3.8e-07  Score=54.70  Aligned_cols=46  Identities=22%  Similarity=0.338  Sum_probs=42.2

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.|++|+|+.+|+..+|..+|  ++.+++..+++.++
T Consensus       101 ~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~~~~~~~~~~~~D  146 (176)
T 1nya_A          101 GPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVD  146 (176)
T ss_dssp             HHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CCHHHHHHHHHHhC
Confidence            45689999999999999999999999999998  89999999998764

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=98.49  E-value=4.2e-08  Score=60.78  Aligned_cols=52  Identities=19%  Similarity=0.252  Sum_probs=45.3

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC-----CCCHHHHHHHHHHHh
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF-----EMTEEHGIVLVCTIV   86 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~-----~~~~~ei~~li~~~~   86 (87)
                      .+.+++++++. |..+|.|++|+|+.+||..+|+.+|.     .++..++..+++.++
T Consensus        27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D   83 (198)
T 1juo_A           27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLD   83 (198)
T ss_dssp             CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHC
T ss_pred             CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhC
Confidence            44446677899 99999999999999999999999987     679999999998764

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=98.48  E-value=2.8e-07  Score=57.25  Aligned_cols=43  Identities=26%  Similarity=0.492  Sum_probs=40.2

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++.+|+.||.|++|+|+.+||..+|..+|  ++.++++.++..++
T Consensus       130 ~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~~~~~~~~~~~~~D  172 (208)
T 2hpk_A          130 SNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEAAYTFFEKAD  172 (208)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHHTT--SCTTHHHHHHHHHC
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHHhC--cCHHHHHHHHHHhC
Confidence            89999999999999999999999999999  88889999998775

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=98.48  E-value=4e-08  Score=62.58  Aligned_cols=55  Identities=24%  Similarity=0.198  Sum_probs=46.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCH------HHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE------EHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~------~ei~~li~~~~   86 (87)
                      ..+++.+.++++.+|..||.|++|+|+.+||..+|+.+|..++.      .++..++..++
T Consensus         8 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D   68 (263)
T 2f33_A            8 LQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYG   68 (263)
T ss_dssp             TTTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHT
T ss_pred             hhcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhC
Confidence            35667778889999999999999999999999999998866554      67788877654

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=98.47  E-value=7.2e-08  Score=60.85  Aligned_cols=48  Identities=21%  Similarity=0.216  Sum_probs=43.4

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC-CCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGF-EMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~-~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||+.+|..+|. .++.++++.+|..++
T Consensus       129 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D  177 (219)
T 3cs1_A          129 FFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELD  177 (219)
T ss_dssp             HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhC
Confidence            457999999999999999999999999999987 788888999998764

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=98.47  E-value=2.8e-07  Score=55.30  Aligned_cols=48  Identities=17%  Similarity=0.187  Sum_probs=42.5

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .....++.+|+.||.|++|+|+.+||+.+|..+|  ++.++++.++..++
T Consensus        91 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g--~~~~~~~~~~~~~D  138 (174)
T 1q80_A           91 VVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAID  138 (174)
T ss_dssp             HHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHT--CCGGGHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhC
Confidence            3456799999999999999999999999999997  78888999998764

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=98.46  E-value=8.8e-09  Score=58.21  Aligned_cols=48  Identities=23%  Similarity=0.388  Sum_probs=43.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh---CCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l---g~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||+.+|..+   |..++.++++.++..++
T Consensus        40 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D   90 (108)
T 2kyc_A           40 SSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAAD   90 (108)
T ss_dssp             SSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHHHTTTC
T ss_pred             HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHHHHHhC
Confidence            4568999999999999999999999999999   88899999999987653

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=98.46  E-value=1.7e-07  Score=59.17  Aligned_cols=47  Identities=19%  Similarity=0.288  Sum_probs=40.3

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC-----CCCHHHHHH----HHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGF-----EMTEEHGIV----LVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~-----~~~~~ei~~----li~~~   85 (87)
                      .+.++.+|+.||.|++|+|+.+||..+|..+|.     .++.++++.    ++..+
T Consensus       128 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~  183 (214)
T 2l4h_A          128 DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEES  183 (214)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHh
Confidence            467999999999999999999999999999875     788888876    55544

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=98.45  E-value=5.4e-08  Score=59.36  Aligned_cols=52  Identities=23%  Similarity=0.367  Sum_probs=45.7

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh-----------CCCCCHHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL-----------GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-----------g~~~~~~ei~~li~~~~   86 (87)
                      +++++..++.+|..+|.|++|.|+.+||..+|..+           |..++..++..++..++
T Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   97 (191)
T 3khe_A           35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVD   97 (191)
T ss_dssp             CTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhC
Confidence            77788999999999999999999999999999987           66677788888887654

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=98.45  E-value=1.9e-07  Score=69.00  Aligned_cols=55  Identities=22%  Similarity=0.515  Sum_probs=51.4

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++.+++..++.+|..||.|++|+|+.+||+.+|+.+|..++..+++.++..++
T Consensus       717 ~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D  771 (863)
T 1sjj_A          717 KGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVD  771 (863)
T ss_dssp             CCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHC
T ss_pred             cCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            5678889999999999999999999999999999999999999999999998764

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=98.44  E-value=5.6e-07  Score=53.37  Aligned_cols=45  Identities=29%  Similarity=0.522  Sum_probs=39.0

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHH----HHhCCCCCHHHHHHHH
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAM----RALGFEMTEEHGIVLV   82 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l----~~lg~~~~~~ei~~li   82 (87)
                      ++.+++.+|..||.|++|+|+.+||..+|    +.+|..++..++..++
T Consensus         2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~   50 (166)
T 3akb_A            2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALY   50 (166)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHH
T ss_pred             HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHH
Confidence            46789999999999999999999999974    5669999988887664

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=98.44  E-value=3.6e-07  Score=55.78  Aligned_cols=45  Identities=16%  Similarity=0.189  Sum_probs=41.4

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +.++.+|+.||.|++|+|+.+||+.+|.  +..++.+++..+|..++
T Consensus       108 ~~~~~~F~~~D~d~~G~I~~~El~~~l~--~~~~~~~~~~~~~~~~d  152 (180)
T 3mse_B          108 TFLKAAFNKIDKDEDGYISKSDIVSLVH--DKVLDNNDIDNFFLSVH  152 (180)
T ss_dssp             CHHHHHHHHHCTTCSSCBCHHHHHHHTT--TSSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHc--CCCCCHHHHHHHHHHhh
Confidence            5789999999999999999999999998  67899999999998875

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=98.42  E-value=5.6e-07  Score=63.22  Aligned_cols=48  Identities=40%  Similarity=0.585  Sum_probs=44.9

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||+.+|..+|..++.++++.++..++
T Consensus       384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D  431 (450)
T 3sg6_A          384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD  431 (450)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            457899999999999999999999999999999999999999998875

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=98.42  E-value=2e-07  Score=56.80  Aligned_cols=47  Identities=19%  Similarity=0.288  Sum_probs=40.5

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC-----CCCHHHHHH----HHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGF-----EMTEEHGIV----LVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~-----~~~~~ei~~----li~~~   85 (87)
                      .+.++.+|+.||.|++|+|+.+||+.+|..+|.     .++.+++..    ++..+
T Consensus        97 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (183)
T 1dgu_A           97 DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEES  152 (183)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHh
Confidence            357999999999999999999999999999876     678888887    55544

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=98.41  E-value=8e-07  Score=55.00  Aligned_cols=54  Identities=13%  Similarity=0.139  Sum_probs=47.2

Q ss_pred             CCCHHHHHHHHHHhhhhCCC-CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDTD-GSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d-~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..+.-..++++.+|..||.+ ++|+|+.+||..+|+.+|...+..+++.++..++
T Consensus        15 ~~t~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D   69 (204)
T 1jba_A           15 AVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFD   69 (204)
T ss_dssp             SCCHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHC
T ss_pred             HhcCCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHc
Confidence            34456778899999999999 8999999999999999999888999999988764

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=98.40  E-value=5.2e-07  Score=54.92  Aligned_cols=46  Identities=28%  Similarity=0.391  Sum_probs=41.9

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+|+..+|.  |..++.+++..++..++
T Consensus       122 ~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~~~~D  167 (191)
T 3khe_A          122 RERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWHQVLQECD  167 (191)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHHHHhC
Confidence            35689999999999999999999999998  88899999999998875

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=98.39  E-value=8.3e-07  Score=53.88  Aligned_cols=48  Identities=23%  Similarity=0.385  Sum_probs=42.6

Q ss_pred             HHHHHHHh--hhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAF--ELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F--~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+++..+|  ..||.|++|+|+.+||..+|..+|..++.+++..+++.++
T Consensus        99 ~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D  148 (186)
T 2hps_A           99 MAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLD  148 (186)
T ss_dssp             HTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHc
Confidence            34566667  8889999999999999999999999999999999998875

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=98.38  E-value=1.2e-06  Score=54.07  Aligned_cols=48  Identities=25%  Similarity=0.295  Sum_probs=40.7

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHH--hCCCCCHH---HHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRA--LGFEMTEE---HGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~--lg~~~~~~---ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||..+|..  .|..++.+   ++..++..++
T Consensus       121 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D  173 (191)
T 3k21_A          121 KKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVD  173 (191)
T ss_dssp             HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhc
Confidence            467899999999999999999999999998  56677764   5788887764

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=98.38  E-value=6.4e-07  Score=50.52  Aligned_cols=46  Identities=20%  Similarity=0.234  Sum_probs=36.4

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHH-----hCCCCCH-----------HHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRA-----LGFEMTE-----------EHGIVLVCTIV   86 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~-----lg~~~~~-----------~ei~~li~~~~   86 (87)
                      .++.+|+.||.|++|+|+.+||..+|+.     +|...+.           ..+..++..++
T Consensus        21 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D   82 (103)
T 1snl_A           21 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVD   82 (103)
T ss_dssp             CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTC
T ss_pred             CHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcC
Confidence            4889999999999999999999999996     4765543           23666766653

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=98.37  E-value=2.7e-07  Score=57.10  Aligned_cols=50  Identities=20%  Similarity=0.317  Sum_probs=42.9

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ..++++++..|+.+|..||.|++|+|+.+||..+ ..+|..++   +..++..+
T Consensus        21 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~   70 (202)
T 2bec_A           21 TGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESF   70 (202)
T ss_dssp             HCCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTT
T ss_pred             cCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHh
Confidence            4789999999999999999999999999999998 77887665   66666544

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=98.37  E-value=1.3e-06  Score=55.12  Aligned_cols=47  Identities=17%  Similarity=0.299  Sum_probs=41.4

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHH----HhCCCCCHHHHHHHHHH
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMR----ALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~----~lg~~~~~~ei~~li~~   84 (87)
                      ..+.++.+|+.||.|++|+|+.+||..+|.    .+|..++.++++.++..
T Consensus       120 ~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~  170 (226)
T 2zfd_A          120 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDK  170 (226)
T ss_dssp             HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            356799999999999999999999999996    57999999999888763

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=98.37  E-value=1.6e-06  Score=53.71  Aligned_cols=47  Identities=26%  Similarity=0.359  Sum_probs=41.2

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHH----HhCCCCCHHHHHHHHHH
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMR----ALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~----~lg~~~~~~ei~~li~~   84 (87)
                      ..+.++.+|+.||.|++|+|+.+||..+|.    .+|..++.++++.++..
T Consensus       109 ~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~  159 (207)
T 2ehb_A          109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDK  159 (207)
T ss_dssp             HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHH
Confidence            356799999999999999999999999985    56999999998888763

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.32  E-value=1.7e-06  Score=60.19  Aligned_cols=53  Identities=25%  Similarity=0.349  Sum_probs=44.5

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHH----HHHHhCCCCC----------HHHHHHHHHHHh
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNV----AMRALGFEMT----------EEHGIVLVCTIV   86 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~----~l~~lg~~~~----------~~ei~~li~~~~   86 (87)
                      ++.+++++++.+|..||.|++|.|+.+||..    +++.+|...+          ..++..++..++
T Consensus       325 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D  391 (486)
T 3mwu_A          325 TTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLD  391 (486)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHC
T ss_pred             ccHHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhc
Confidence            4788899999999999999999999999954    4555677766          788888888764

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=98.31  E-value=3.5e-07  Score=55.17  Aligned_cols=47  Identities=17%  Similarity=0.224  Sum_probs=41.0

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ....++.+|+.+|.|++|+|+.+|+..++..+|  ++.+++..+++.++
T Consensus       103 ~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g--~~~~~~~~~~~~~D  149 (185)
T 2sas_A          103 CQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVIT  149 (185)
T ss_dssp             HHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC--CCHHHHHHHHHHhc
Confidence            446789999999999999999999999998887  56778888888765

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=98.31  E-value=1.4e-06  Score=52.34  Aligned_cols=43  Identities=21%  Similarity=0.237  Sum_probs=38.9

Q ss_pred             HHhhhhCCCCCCcccHHHHHHHHHHhCC-----CCCHHHHHHHHHHHh
Q 048414           44 EAFELFDTDGSGTIDAKELNVAMRALGF-----EMTEEHGIVLVCTIV   86 (87)
Q Consensus        44 ~~F~~~D~d~~G~I~~~el~~~l~~lg~-----~~~~~ei~~li~~~~   86 (87)
                      ++|..+|.|++|+|+.+||..+|+.+|.     .++..++..++..++
T Consensus         5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D   52 (167)
T 1gjy_A            5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLD   52 (167)
T ss_dssp             HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHC
Confidence            4599999999999999999999999997     689999999998764

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=98.31  E-value=1e-06  Score=55.98  Aligned_cols=48  Identities=21%  Similarity=0.340  Sum_probs=39.2

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh------------CCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL------------GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l------------g~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||..++..+            +..++.++++.+++.++
T Consensus       137 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D  196 (229)
T 3dd4_A          137 QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMD  196 (229)
T ss_dssp             HHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhc
Confidence            3578999999999999999999999999987            55677788999988774

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.30  E-value=5.3e-07  Score=62.86  Aligned_cols=53  Identities=23%  Similarity=0.300  Sum_probs=46.6

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC--------CCCHHHHHHHHHHHh
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF--------EMTEEHGIVLVCTIV   86 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~--------~~~~~ei~~li~~~~   86 (87)
                      ++++++++++++|+.||.|++|.|+.+||..+|+.+|.        ..+..+++.+++.++
T Consensus       340 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D  400 (494)
T 3lij_A          340 TSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD  400 (494)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHC
T ss_pred             ccHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhC
Confidence            48899999999999999999999999999999999864        455788888888764

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=98.28  E-value=1.6e-06  Score=53.29  Aligned_cols=53  Identities=21%  Similarity=0.239  Sum_probs=45.0

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHH-------HhCCCCCHHHHHHHHHHHh
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMR-------ALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-------~lg~~~~~~ei~~li~~~~   86 (87)
                      ......+.++.+|+.||.|++|+|+.+||..+|.       ..|...+.++++.+++.++
T Consensus       103 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D  162 (204)
T 3e3r_A          103 MSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFD  162 (204)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHS
T ss_pred             cCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhh
Confidence            4455677899999999999999999999999998       4566778888999998765

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=98.27  E-value=2e-06  Score=54.62  Aligned_cols=43  Identities=23%  Similarity=0.345  Sum_probs=39.4

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh----CCCCCHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL----GFEMTEEHGIVL   81 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l----g~~~~~~ei~~l   81 (87)
                      .++++.+|..||.+++|+|+.+||..+|..+    |..++..++..+
T Consensus       102 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~  148 (263)
T 2f33_A          102 CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEY  148 (263)
T ss_dssp             HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHH
Confidence            5568999999999999999999999999988    999999998873

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.27  E-value=9.2e-07  Score=61.33  Aligned_cols=52  Identities=27%  Similarity=0.414  Sum_probs=41.4

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHH----HHHHHHhCCCCC-------HHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKEL----NVAMRALGFEMT-------EEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el----~~~l~~lg~~~~-------~~ei~~li~~~~   86 (87)
                      ++++.++++.+|..||.|++|.|+.+||    ..+++.+|...+       ..+++.+++.++
T Consensus       330 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D  392 (484)
T 3nyv_A          330 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVD  392 (484)
T ss_dssp             HHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhC
Confidence            6788889999999999999999999999    555556688777       788888888765

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=98.27  E-value=3.4e-06  Score=52.67  Aligned_cols=48  Identities=31%  Similarity=0.432  Sum_probs=40.5

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC-----CCCCHHH-HHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALG-----FEMTEEH-GIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg-----~~~~~~e-i~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||..+|..++     ..++.++ ++.+++.++
T Consensus        92 ~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D  145 (211)
T 2ggz_A           92 EQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKID  145 (211)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhC
Confidence            45789999999999999999999999999886     5666644 788888764

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=98.26  E-value=6.3e-07  Score=52.68  Aligned_cols=46  Identities=15%  Similarity=0.274  Sum_probs=33.1

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ++++..++.+|..+|.|++|+|+.+|| ..|..++...   ++..++..+
T Consensus         2 ~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~---~~~~~~~~~   47 (155)
T 3ll8_B            2 ADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP---LVQRVIDIF   47 (155)
T ss_dssp             CHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT---THHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch---HHHHHHHHH
Confidence            467788888888888888888888888 5666666544   455555544

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=98.26  E-value=9e-07  Score=53.00  Aligned_cols=43  Identities=16%  Similarity=0.251  Sum_probs=39.2

Q ss_pred             HHhhhhCCCCCCcccHHHHHHHHHHhCC-----CCCHHHHHHHHHHHh
Q 048414           44 EAFELFDTDGSGTIDAKELNVAMRALGF-----EMTEEHGIVLVCTIV   86 (87)
Q Consensus        44 ~~F~~~D~d~~G~I~~~el~~~l~~lg~-----~~~~~ei~~li~~~~   86 (87)
                      .+|..+|.|++|.|+.+||..+|+.+|.     .++..++..+++.++
T Consensus         3 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D   50 (165)
T 1k94_A            3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLD   50 (165)
T ss_dssp             HHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhC
Confidence            5699999999999999999999999997     689999999998764

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=98.25  E-value=1.5e-06  Score=55.11  Aligned_cols=45  Identities=27%  Similarity=0.430  Sum_probs=38.9

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh---CCCCCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l---g~~~~~~ei~~li~~~~   86 (87)
                      +.++.+|+.||.|++|+|+.+||+.+|..+   |...+  ++..+|..++
T Consensus       133 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~--e~~~~~~~~D  180 (226)
T 2lvv_A          133 FELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDIT--DATTVFNEID  180 (226)
T ss_dssp             HHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCC--SCHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHH--HHHHHHHHhC
Confidence            478999999999999999999999999987   76665  4888887764

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=98.24  E-value=1.6e-06  Score=55.25  Aligned_cols=50  Identities=12%  Similarity=0.258  Sum_probs=43.0

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC----CCCHHHHHH----HHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF----EMTEEHGIV----LVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~----~~~~~ei~~----li~~~~   86 (87)
                      ...+.++.+|+.||.|++|+|+.+||..+|..+|.    .++..+++.    ++..++
T Consensus       193 ~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D  250 (272)
T 2be4_A          193 ERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCD  250 (272)
T ss_dssp             HHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHC
T ss_pred             ccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhC
Confidence            34567999999999999999999999999998876    799999887    666553

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=98.22  E-value=4.6e-06  Score=51.28  Aligned_cols=48  Identities=33%  Similarity=0.461  Sum_probs=40.0

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC------CCCCHHH-HHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALG------FEMTEEH-GIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg------~~~~~~e-i~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||..+|..++      ..++.++ +..+++.++
T Consensus        87 ~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D  141 (198)
T 2r2i_A           87 DQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKID  141 (198)
T ss_dssp             HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhC
Confidence            45688999999999999999999999999886      5566554 788887764

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=98.22  E-value=4.7e-07  Score=55.88  Aligned_cols=45  Identities=31%  Similarity=0.494  Sum_probs=39.7

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +.++.+|+.||.|++|+|+.+||+.+|..+|  ++.+++..+++.++
T Consensus        82 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g--~~~~~~~~~~~~~D  126 (188)
T 1s6i_A           82 ENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEID  126 (188)
T ss_dssp             CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTT--CCTTHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHC
Confidence            3478999999999999999999999999887  67788999998764

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.21  E-value=4.2e-06  Score=58.03  Aligned_cols=47  Identities=23%  Similarity=0.453  Sum_probs=41.8

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..+.++.+|+.||.|++|+|+.+||..+|..  ..++.++++.+|+.++
T Consensus       416 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~--~~~~~~~~~~~~~~~D  462 (484)
T 3nyv_A          416 SRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSEVD  462 (484)
T ss_dssp             HHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH--TTCCHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhc
Confidence            3467899999999999999999999999987  5688999999999875

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=98.20  E-value=2.1e-06  Score=62.97  Aligned_cols=48  Identities=25%  Similarity=0.430  Sum_probs=44.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++.++.+|+.||.|++|+|+.+||+.+|+.+|..++.++++.++..++
T Consensus       604 ~~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D  651 (714)
T 3bow_A          604 IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA  651 (714)
T ss_dssp             HHHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            356899999999999999999999999999999999999999998763

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=98.19  E-value=4.5e-06  Score=50.51  Aligned_cols=48  Identities=23%  Similarity=0.419  Sum_probs=37.6

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh----CCC----CCH----HHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL----GFE----MTE----EHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l----g~~----~~~----~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+|+..++..+    |..    ++.    +++..+++.++
T Consensus        91 ~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D  150 (183)
T 1s6c_A           91 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMD  150 (183)
T ss_dssp             HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhC
Confidence            3578999999999999999999999999887    643    343    77888888764

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=98.18  E-value=1.7e-07  Score=54.95  Aligned_cols=46  Identities=15%  Similarity=0.238  Sum_probs=37.3

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..+..++++.+|+.||    |+|+.+||+.+|+.+|.  +.++++.+|+.++
T Consensus        45 ~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~lG~--t~~ei~~~~~~~D   90 (123)
T 2kld_A           45 KKNTVDDISESLRQGG----GKLNFDELRQDLKGKGH--TDAEIEAIFTKYD   90 (123)
T ss_dssp             ------CCSCSSTTTT----TCEEHHHHHHHTTTCCS--SHHHHHHHHHHHS
T ss_pred             ChhHHHHHHHHHHHhC----CCCCHHHHHHHHHHhCC--CHHHHHHHHHHHc
Confidence            3455677999999999    99999999999999997  9999999998874

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=98.18  E-value=5e-06  Score=50.48  Aligned_cols=51  Identities=12%  Similarity=-0.031  Sum_probs=43.7

Q ss_pred             cCCCCCHHHHHHHHHHhhhhCC-----CC-C--CcccHHHHHHHHHHhCCCCCHHHHHHH
Q 048414           30 RHHGLSQQKKQEIKEAFELFDT-----DG-S--GTIDAKELNVAMRALGFEMTEEHGIVL   81 (87)
Q Consensus        30 ~~~~~~~~~~~~l~~~F~~~D~-----d~-~--G~I~~~el~~~l~~lg~~~~~~ei~~l   81 (87)
                      ....++.+++..++.+|..+|.     |+ +  |+|+.+||.. |..+|..++..++-.+
T Consensus        10 ~~~~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~~l~~~   68 (183)
T 1dgu_A           10 DLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKERICRV   68 (183)
T ss_dssp             CCCSCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHHHHHHH
T ss_pred             HHcCCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHHHHHHH
Confidence            4467899999999999999999     68 8  9999999999 9999998887655443

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=98.17  E-value=9.6e-07  Score=59.20  Aligned_cols=46  Identities=15%  Similarity=0.122  Sum_probs=42.4

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHH-HHhCCCCCHHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAM-RALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l-~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+..+|..||.|++|+|+.+||..+| ..+|..++..++..+|..++
T Consensus       254 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D  300 (323)
T 1ij5_A          254 VLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVD  300 (323)
T ss_dssp             HHHHHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHC
Confidence            47889999999999999999999999 99999899999999998765

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=98.14  E-value=7.7e-07  Score=53.02  Aligned_cols=46  Identities=30%  Similarity=0.442  Sum_probs=33.5

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.+|.+++|+|+.+||..+|..+|  ++.++++.++..++
T Consensus        98 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~--~~~~~~~~~~~~~d  143 (166)
T 2aao_A           98 EDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELMRDVD  143 (166)
T ss_dssp             THHHHHHHHHHCTTCSSSBCHHHHHHHTCC----------CCHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhC
Confidence            45789999999999999999999999998877  56778888887764

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=98.14  E-value=6.6e-06  Score=50.82  Aligned_cols=54  Identities=11%  Similarity=0.150  Sum_probs=43.7

Q ss_pred             CCCCHHHHHHHHHHhhhhCCC--CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTD--GSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d--~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++.+++..++.+|..+|.|  ++|.|+.+||..+|.. ........+..++..++
T Consensus        29 ~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D   84 (207)
T 2ehb_A           29 TPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFD   84 (207)
T ss_dssp             SSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhc
Confidence            468999999999999999999  9999999999999986 33334455666776653

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=98.14  E-value=9e-06  Score=49.97  Aligned_cols=54  Identities=20%  Similarity=0.165  Sum_probs=45.2

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+.......++.+|..+|.|++|.|+..|+..++..++...+..++..+++.++
T Consensus        45 ~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D   98 (198)
T 2r2i_A           45 NLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYD   98 (198)
T ss_dssp             SCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHC
T ss_pred             CCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhc
Confidence            344555667999999999999999999999999999888788888888887664

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=98.14  E-value=4.6e-06  Score=50.67  Aligned_cols=48  Identities=23%  Similarity=0.350  Sum_probs=39.9

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh----C--------CCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL----G--------FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l----g--------~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+|+..++..+    |        ...+.+++..+++.++
T Consensus        98 ~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D  157 (190)
T 1g8i_A           98 DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMD  157 (190)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhc
Confidence            4568899999999999999999999999873    4        3467788999988764

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.11  E-value=2.1e-07  Score=64.75  Aligned_cols=48  Identities=27%  Similarity=0.426  Sum_probs=24.2

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||+.+|..+|..++.++++.+|+.++
T Consensus       416 ~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D  463 (486)
T 3mwu_A          416 RERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVD  463 (486)
T ss_dssp             HHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCC
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            356899999999999999999999999999999899999988887653

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=98.11  E-value=3e-06  Score=62.16  Aligned_cols=53  Identities=15%  Similarity=0.202  Sum_probs=48.7

Q ss_pred             CCCHHH-HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh--------CCCCCHHHHHHHHHHHh
Q 048414           33 GLSQQK-KQEIKEAFELFDTDGSGTIDAKELNVAMRAL--------GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~-~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l--------g~~~~~~ei~~li~~~~   86 (87)
                      .+++++ +++++.+|..|| +++|.|+.+||+.+|+.+        |..++.++++.++..++
T Consensus       524 ~ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D  585 (714)
T 3bow_A          524 EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLD  585 (714)
T ss_dssp             CCSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHC
T ss_pred             CCChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhC
Confidence            478888 899999999999 999999999999999997        88899999999998765

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=98.11  E-value=6.6e-06  Score=51.88  Aligned_cols=54  Identities=13%  Similarity=0.111  Sum_probs=43.5

Q ss_pred             CCCCHHHHHHHHHHhhhhCCC--CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTD--GSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d--~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++.+++..++.+|..+|.|  ++|.|+.+||..+|.. +.......+..++..++
T Consensus        40 ~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D   95 (226)
T 2zfd_A           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFD   95 (226)
T ss_dssp             SSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHc
Confidence            478999999999999999999  9999999999999976 33334445666776653

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=98.10  E-value=1.4e-05  Score=48.62  Aligned_cols=48  Identities=23%  Similarity=0.326  Sum_probs=40.6

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh----C--------CCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL----G--------FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l----g--------~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+|+..++..+    |        ...+.+++..+++.++
T Consensus        98 ~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D  157 (190)
T 2l2e_A           98 NDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMD  157 (190)
T ss_dssp             HHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHT
T ss_pred             HHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhC
Confidence            4578899999999999999999999998873    3        3567888999998775

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=98.09  E-value=5.7e-06  Score=61.81  Aligned_cols=47  Identities=30%  Similarity=0.472  Sum_probs=43.7

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ++.++.+|+.||.|++|+|+.+||+.+|+.+|..++.++++.++..+
T Consensus       606 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~  652 (900)
T 1qxp_A          606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARF  652 (900)
T ss_dssp             HHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHT
T ss_pred             HHHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence            36789999999999999999999999999999999999999998875

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=98.09  E-value=4.2e-07  Score=65.92  Aligned_cols=47  Identities=13%  Similarity=0.164  Sum_probs=0.0

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++|..||.|++|+|+.+||+.+|+.+|..++.++++.+|+.++
T Consensus        11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D   57 (624)
T 1djx_A           11 HWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECD   57 (624)
T ss_dssp             -----------------------------------------------
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            36899999999999999999999999999999999999999998765

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=98.06  E-value=5.3e-06  Score=47.23  Aligned_cols=45  Identities=24%  Similarity=0.359  Sum_probs=36.4

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...+++.+|+.+|.+++|+|+.+|+..++..+|..+    +..++..++
T Consensus        73 ~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~----~~~~~~~~D  117 (134)
T 1jfj_A           73 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK----VAEQVMKAD  117 (134)
T ss_dssp             HHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTCHH----HHHHHHHHH
T ss_pred             CHHHHHHHHHHHCCCCCCccCHHHHHHHHHHhCHHH----HHHHHHHhC
Confidence            345589999999999999999999999998877543    677776654

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=98.06  E-value=1.3e-06  Score=54.39  Aligned_cols=45  Identities=16%  Similarity=0.314  Sum_probs=39.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH   77 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e   77 (87)
                      ..++++++..++.+|..||.|++|+|+.+||..++ .+|..++.++
T Consensus        21 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~~~~   65 (208)
T 2ct9_A           21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLGDR   65 (208)
T ss_dssp             HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTTHHH
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCcHHH
Confidence            57899999999999999999999999999999965 6777776544

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=98.05  E-value=8.7e-06  Score=49.43  Aligned_cols=44  Identities=20%  Similarity=0.196  Sum_probs=28.5

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      +..+|..+|.|++|.|+..|+..++..++...+.+++..+++.+
T Consensus        65 ~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~  108 (190)
T 1fpw_A           65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELY  108 (190)
T ss_dssp             HHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcHHHHHHHHHHh
Confidence            55666666666666666666666666666656666666666554

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=98.04  E-value=1.1e-05  Score=48.93  Aligned_cols=47  Identities=21%  Similarity=0.282  Sum_probs=39.8

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHH----hCC--------CCCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRA----LGF--------EMTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~----lg~--------~~~~~ei~~li~~~~   86 (87)
                      ++++.+|+.||.|++|+|+.+|+..++..    +|.        ..+.+++..+++.++
T Consensus        99 ~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D  157 (190)
T 1fpw_A           99 EKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMD  157 (190)
T ss_dssp             HHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhC
Confidence            46788999999999999999999999988    353        367788999988765

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=98.04  E-value=1.1e-05  Score=51.13  Aligned_cols=48  Identities=21%  Similarity=0.397  Sum_probs=39.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh----CCC----CC----HHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL----GFE----MT----EEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l----g~~----~~----~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||..+|..+    |..    ++    .+++..+++.++
T Consensus       124 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D  183 (224)
T 1s1e_A          124 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMD  183 (224)
T ss_dssp             HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhC
Confidence            3468899999999999999999999999876    643    22    477888888764

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=98.04  E-value=1e-05  Score=52.06  Aligned_cols=48  Identities=25%  Similarity=0.403  Sum_probs=40.5

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh----C--------CCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL----G--------FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l----g--------~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||..+|..+    |        ...+.++++.+++.++
T Consensus       164 ~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D  223 (256)
T 2jul_A          164 HEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMD  223 (256)
T ss_dssp             HHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHC
Confidence            4578999999999999999999999999876    5        3446788888888764

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=98.02  E-value=5.4e-06  Score=51.24  Aligned_cols=47  Identities=26%  Similarity=0.338  Sum_probs=38.7

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh----C----CCCCH------HHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL----G----FEMTE------EHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l----g----~~~~~------~ei~~li~~~~   86 (87)
                      +.++.+|+.||.|++|+|+.+||..+|..+    |    ..++.      +++..+|+.++
T Consensus       107 ~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D  167 (207)
T 2d8n_A          107 QKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFG  167 (207)
T ss_dssp             TTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcC
Confidence            357889999999999999999999999886    7    55553      56888888764

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.02  E-value=4.5e-06  Score=58.30  Aligned_cols=46  Identities=28%  Similarity=0.385  Sum_probs=40.4

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||..+|..  ..++.++++.+|+.++
T Consensus       434 ~~~~~~~F~~~D~d~dG~Is~~El~~~l~~--~~~~~~~~~~~~~~~D  479 (504)
T 3q5i_A          434 EERLRRAFNLFDTDKSGKITKEELANLFGL--TSISEKTWNDVLGEAD  479 (504)
T ss_dssp             HHHHHHHHHHHCTTCCSEECHHHHHHHTTC--SCCCHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhcCCCCCcCcHHHHHHHHhh--CCCCHHHHHHHHHHhC
Confidence            467899999999999999999999999876  4578999999998765

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=98.01  E-value=3.2e-05  Score=46.66  Aligned_cols=53  Identities=9%  Similarity=0.066  Sum_probs=38.8

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC-CCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE-MTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~-~~~~ei~~li~~~~   86 (87)
                      ..++.+++..+..+|..+  |++|.|+.+|+..+|+.+|.. .+..++..+++.++
T Consensus        13 ~~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D   66 (183)
T 1s6c_A           13 TNFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFD   66 (183)
T ss_dssp             SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHC
T ss_pred             cCCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhC
Confidence            356777766666666654  577888888888888888765 67888888877654

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=98.01  E-value=1.4e-05  Score=48.56  Aligned_cols=47  Identities=23%  Similarity=0.193  Sum_probs=34.3

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++.+|+.+|.+++|.|+.+|+..++..++...+.+++..+++.++
T Consensus        63 ~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D  109 (190)
T 2l2e_A           63 AFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYD  109 (190)
T ss_dssp             HHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHhHcc
Confidence            45667778888888888888888877777776677777777766553

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=98.00  E-value=2.2e-05  Score=48.87  Aligned_cols=53  Identities=23%  Similarity=0.250  Sum_probs=42.4

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +.......++.+|..+|.|++|.|+.+|+..++..++...+.+++..+++.++
T Consensus        51 ~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D  103 (211)
T 2ggz_A           51 LNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYD  103 (211)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHC
T ss_pred             CCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhc
Confidence            34455567889999999999999999999999888877777777888777654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=97.99  E-value=3.9e-06  Score=58.47  Aligned_cols=46  Identities=26%  Similarity=0.419  Sum_probs=38.5

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||+.+|..  ..++.++++.+|+.++
T Consensus       425 ~~~~~~~F~~~D~d~~G~Is~~El~~~l~~--~~~~~~~~~~~~~~~D  470 (494)
T 3lij_A          425 KDKLESAFQKFDQDGNGKISVDELASVFGL--DHLESKTWKEMISGID  470 (494)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHC-C--CSCCCHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhC
Confidence            456889999999999999999999999875  5678888999988764

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=97.94  E-value=2e-05  Score=47.88  Aligned_cols=45  Identities=24%  Similarity=0.304  Sum_probs=27.3

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      .+..+|..+|.+++|.|+..|+..++..++...+..++..+++.+
T Consensus        64 ~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~  108 (193)
T 1bjf_A           64 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMY  108 (193)
T ss_dssp             HHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHHHhhc
Confidence            355666666666666666666666666665555555555555544

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=97.94  E-value=1.3e-05  Score=49.49  Aligned_cols=45  Identities=11%  Similarity=0.123  Sum_probs=24.6

Q ss_pred             HHHHHhhhhCCC-CCCcccHHHHHHHHHHhCCC-CCHHHHHHHHHHH
Q 048414           41 EIKEAFELFDTD-GSGTIDAKELNVAMRALGFE-MTEEHGIVLVCTI   85 (87)
Q Consensus        41 ~l~~~F~~~D~d-~~G~I~~~el~~~l~~lg~~-~~~~ei~~li~~~   85 (87)
                      +++.+|..||.+ ++|.|+.+||..+|..++.. .+..++..+++.+
T Consensus        34 ~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~   80 (207)
T 2d8n_A           34 ELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSF   80 (207)
T ss_dssp             HHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHh
Confidence            344455555555 46666666666666655543 4555555555544

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=97.89  E-value=2.3e-05  Score=47.66  Aligned_cols=48  Identities=27%  Similarity=0.453  Sum_probs=37.8

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh----C--CCCCH------HHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL----G--FEMTE------EHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l----g--~~~~~------~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+||..++..+    |  ..++.      ..+..+++.++
T Consensus        98 ~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D  157 (193)
T 1bjf_A           98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMD  157 (193)
T ss_dssp             HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSC
T ss_pred             HHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhC
Confidence            4568899999999999999999999999874    5  23443      44778877654

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=97.89  E-value=3.3e-05  Score=47.58  Aligned_cols=48  Identities=25%  Similarity=0.177  Sum_probs=41.4

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...+..+|..+|.|++|.|+.+|+..++..++...+.+++..+++.++
T Consensus        58 ~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D  105 (204)
T 1jba_A           58 TQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYD  105 (204)
T ss_dssp             HHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHHHHHHHhC
Confidence            456788999999999999999999999998887778888888887664

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=97.80  E-value=2.5e-05  Score=47.34  Aligned_cols=44  Identities=16%  Similarity=0.280  Sum_probs=21.9

Q ss_pred             HHHHhhhhCCC-CCCcccHHHHHHHHHHh-CCCCCHHHHHHHHHHH
Q 048414           42 IKEAFELFDTD-GSGTIDAKELNVAMRAL-GFEMTEEHGIVLVCTI   85 (87)
Q Consensus        42 l~~~F~~~D~d-~~G~I~~~el~~~l~~l-g~~~~~~ei~~li~~~   85 (87)
                      ++.+|..||.+ ++|.|+.+|+..+|+.+ +...+..++..++..+
T Consensus        27 i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~   72 (190)
T 1g8i_A           27 VQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVF   72 (190)
T ss_dssp             HHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHH
Confidence            44444445544 55566666666555555 1123444455555443

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=97.78  E-value=8.9e-06  Score=60.54  Aligned_cols=47  Identities=13%  Similarity=0.101  Sum_probs=29.7

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh-CCC---------CCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL-GFE---------MTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-g~~---------~~~~ei~~li~~~~   86 (87)
                      ++++.+|+.||.+++|+|+.+||+.+|..+ |..         ++.+++++||+.++
T Consensus       219 ~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d  275 (799)
T 2zkm_X          219 PEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYE  275 (799)
T ss_dssp             HHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHC
T ss_pred             HHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhh
Confidence            578999999999999999999999999998 665         78899999998764

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=97.75  E-value=2.9e-05  Score=47.63  Aligned_cols=45  Identities=9%  Similarity=0.281  Sum_probs=37.8

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++.+++.+|..||  ++|+|+.+||..+|   |...+...+..++..+.
T Consensus        25 ~~~~~~~~~F~~~D--~dG~I~~~el~~~l---g~~~~~~~~~~i~~~~d   69 (179)
T 3a8r_A           25 DGWAAVEKRFNQLQ--VDGVLLRSRFGKCI---GMDGSDEFAVQMFDSLA   69 (179)
T ss_dssp             CCHHHHHHHHHHHC--BTTBEEGGGHHHHH---TCCSCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHhccC--CCCCCcHHHHHHHH---CCCCcHHHHHHHHHHHH
Confidence            45678999999999  79999999999865   88888888888887653

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=97.67  E-value=4.3e-05  Score=49.09  Aligned_cols=51  Identities=10%  Similarity=0.137  Sum_probs=36.4

Q ss_pred             CCCHHHHHHHHHHhhhhCC-CCCCcccHHHHHHHHHHhC-CCCCHHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDT-DGSGTIDAKELNVAMRALG-FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~-d~~G~I~~~el~~~l~~lg-~~~~~~ei~~li~~~~   86 (87)
                      .++.+++..+   |..||. +++|.|+.+||..+|+.++ ...+..++..++..++
T Consensus        87 ~~s~~ei~~l---~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D  139 (256)
T 2jul_A           87 KFTKKELQSL---YRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFD  139 (256)
T ss_dssp             TSCHHHHHHH---HHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSS
T ss_pred             CCCHHHHHHH---HHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhc
Confidence            4666665555   444444 3789999999999999886 4567778888887654

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=97.67  E-value=0.00022  Score=44.94  Aligned_cols=53  Identities=9%  Similarity=0.043  Sum_probs=40.3

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC-CCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE-MTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~-~~~~ei~~li~~~~   86 (87)
                      ..++.+++..+...|...  +++|.|+.+||..+|+.+|.. .+..++..+++.++
T Consensus        46 ~~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D   99 (224)
T 1s1e_A           46 TNFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFD   99 (224)
T ss_dssp             SSCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHC
T ss_pred             cCCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhc
Confidence            357777766665555554  478999999999999998754 78888888888764

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=97.67  E-value=7.9e-05  Score=54.13  Aligned_cols=46  Identities=20%  Similarity=0.166  Sum_probs=40.9

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh-CCC-CCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL-GFE-MTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-g~~-~~~~ei~~li~~~~   86 (87)
                      ++++.+|+.||.+ +|+|+.+||+.+|... |.. ++.+++++||+.++
T Consensus        80 ~el~~aF~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d  127 (624)
T 1djx_A           80 AEIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYE  127 (624)
T ss_dssp             HHHHHHHHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhC
Confidence            5699999999985 8999999999999976 776 89999999998864

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=97.57  E-value=0.00024  Score=46.71  Aligned_cols=47  Identities=15%  Similarity=0.148  Sum_probs=35.4

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHH-------hCC------CCCHHHHHHHHHHH
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRA-------LGF------EMTEEHGIVLVCTI   85 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-------lg~------~~~~~ei~~li~~~   85 (87)
                      -.++++-+|+.|| |++|+|+.+||..+|+.       +|.      .-.+..++.+++.+
T Consensus       166 leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~  225 (261)
T 1eg3_A          166 LEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  225 (261)
T ss_dssp             HHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhC
Confidence            3568999999999 99999999999998865       332      22355667776654

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=97.51  E-value=4.3e-05  Score=48.01  Aligned_cols=50  Identities=12%  Similarity=-0.044  Sum_probs=41.0

Q ss_pred             cCCCCCHHHHHHHHHHhhhhCC-----CC-C--CcccHHHHHHHHHHhCCCCCHHHHHH
Q 048414           30 RHHGLSQQKKQEIKEAFELFDT-----DG-S--GTIDAKELNVAMRALGFEMTEEHGIV   80 (87)
Q Consensus        30 ~~~~~~~~~~~~l~~~F~~~D~-----d~-~--G~I~~~el~~~l~~lg~~~~~~ei~~   80 (87)
                      ....++..++..|.++|..+|.     |+ +  |+|+.+||.. |..+|.+++..++-.
T Consensus        41 ~~t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~~~lf~   98 (214)
T 2l4h_A           41 DLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKERICR   98 (214)
T ss_dssp             SCCSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTHHHHHH
T ss_pred             HhCCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHHHHHHH
Confidence            3457888999999999999998     66 6  9999999999 888998887655433

>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A

Probab=97.51  E-value=0.00023  Score=42.29  Aligned_cols=40  Identities=28%  Similarity=0.286  Sum_probs=37.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF   71 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~   71 (87)
                      ..+++++++.+.+++..||++++|+|...+|..+|..+..
T Consensus        35 ~~l~~~dl~~F~~~W~~fDP~aTg~I~~~~L~~ll~~L~p   74 (129)
T 2kav_A           35 EPLSEDDFEMFYEVWEKFDPDATQFIEFAKLSDFADALDP   74 (129)
T ss_dssp             CSSCHHHHHHHHHHHHHHCTTCCCEECGGGHHHHHHHSCT
T ss_pred             cCCCHHHHHHHHHHHHhcCCCCceEEeHHHHHHHHHhCCc
Confidence            4689999999999999999999999999999999999754

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=97.50  E-value=0.00011  Score=37.34  Aligned_cols=30  Identities=30%  Similarity=0.483  Sum_probs=26.5

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      .+++..+|..+|.+++|.|+.+|+..++..
T Consensus        35 ~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~   64 (66)
T 3li6_A           35 EQLLQLIFKSIDADGNGEIDQNEFAKFYGS   64 (66)
T ss_dssp             HHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            356888999999999999999999998864

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=97.43  E-value=0.00023  Score=43.55  Aligned_cols=37  Identities=19%  Similarity=0.125  Sum_probs=31.7

Q ss_pred             CCCCCCcccHHHHHHHHHHh------CCCCCHHHHHHHHHHHh
Q 048414           50 DTDGSGTIDAKELNVAMRAL------GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        50 D~d~~G~I~~~el~~~l~~l------g~~~~~~ei~~li~~~~   86 (87)
                      +.|++|+|+.+||+.+|+.+      |..++.++++.++..++
T Consensus        14 ~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D   56 (174)
T 2i7a_A           14 LVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALME   56 (174)
T ss_dssp             SCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHC
T ss_pred             cCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHC
Confidence            57899999999999999998      67899999999998765

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=97.40  E-value=1e-05  Score=60.50  Aligned_cols=52  Identities=19%  Similarity=0.216  Sum_probs=33.6

Q ss_pred             CCHHH-HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC--------CCCHHHHHHHHHHHh
Q 048414           34 LSQQK-KQEIKEAFELFDTDGSGTIDAKELNVAMRALGF--------EMTEEHGIVLVCTIV   86 (87)
Q Consensus        34 ~~~~~-~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~--------~~~~~ei~~li~~~~   86 (87)
                      +++++ +++++.+|..|| +++|.|+.+||+.+|+.++.        .++.++++.+++.++
T Consensus       527 l~~~e~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D  587 (900)
T 1qxp_A          527 LSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMD  587 (900)
T ss_dssp             --------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHC
T ss_pred             CCcchHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhC
Confidence            45555 789999999999 99999999999999998875        789999999998765

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=97.38  E-value=0.00024  Score=44.90  Aligned_cols=42  Identities=19%  Similarity=0.162  Sum_probs=20.2

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVC   83 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~   83 (87)
                      +..+|+.+|.|++|.|+.+|+..++..++.....+.+..+++
T Consensus       104 ~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~  145 (229)
T 3dd4_A          104 AHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFN  145 (229)
T ss_dssp             HHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHHH
Confidence            344555555555555555555555544332233333444333

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=97.26  E-value=0.00036  Score=35.27  Aligned_cols=29  Identities=31%  Similarity=0.619  Sum_probs=25.7

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      +++..+|..+|.+++|.|+.+|+..++..
T Consensus        37 ~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A           37 EDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            35788999999999999999999998864

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=97.16  E-value=0.00092  Score=50.43  Aligned_cols=46  Identities=9%  Similarity=0.087  Sum_probs=40.6

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhC-C---------CCCHHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALG-F---------EMTEEHGIVLVCTI   85 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg-~---------~~~~~ei~~li~~~   85 (87)
                      .+++.+|+.||.+++|+|+.++|+.+|+..+ .         .++.+++..||+..
T Consensus       223 ~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~  278 (885)
T 3ohm_B          223 PDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKY  278 (885)
T ss_dssp             HHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHh
Confidence            4689999999999999999999999999985 3         27889999999864

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=97.05  E-value=0.00096  Score=36.58  Aligned_cols=31  Identities=19%  Similarity=0.444  Sum_probs=26.9

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ...+..+|+.+|.|++|.|+.+|+..++..+
T Consensus        51 ~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l   81 (92)
T 3rm1_A           51 QEVVDKVMETLDSNGDGECDFQEFMAFVAMI   81 (92)
T ss_dssp             HHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            3457888999999999999999999888764

>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A

Probab=97.03  E-value=0.0012  Score=40.80  Aligned_cols=40  Identities=25%  Similarity=0.236  Sum_probs=37.3

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF   71 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~   71 (87)
                      ..+++++++.+..++..||++.+|+|...+|..+|..+..
T Consensus        12 ~~L~~~dl~~F~~~W~~fDP~ATgfI~~~~L~~~l~~L~p   51 (168)
T 4dck_A           12 EPLSEDDFDMFYEIWEKFDPEATQFIEYSVLSDFADALSE   51 (168)
T ss_dssp             SCBCHHHHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHSCT
T ss_pred             cCCCHHHHHHHHHHHHHhCCCCcceeeHHHHHHHHHhcCC
Confidence            5799999999999999999999999999999999998743

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=96.99  E-value=0.0012  Score=36.61  Aligned_cols=31  Identities=13%  Similarity=0.306  Sum_probs=27.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .+++.++|+.+|.|++|.|+.+|+..++..+
T Consensus        52 ~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~   82 (93)
T 4eto_A           52 EAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   82 (93)
T ss_dssp             HHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            4568888999999999999999999888764

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=96.97  E-value=0.0012  Score=37.43  Aligned_cols=31  Identities=13%  Similarity=0.312  Sum_probs=27.0

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .+++..+|+.+|.|++|.|+.+|+..++..+
T Consensus        55 ~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~   85 (104)
T 3zwh_A           55 EAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI   85 (104)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            3567888999999999999999999888764

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=96.96  E-value=0.0012  Score=37.17  Aligned_cols=33  Identities=12%  Similarity=0.190  Sum_probs=29.2

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGF   71 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~   71 (87)
                      .+++..+|+.+|.|++|.|+.+|+..+|..+..
T Consensus        54 ~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~~   86 (100)
T 3nxa_A           54 RKAADKLIQNLDANHDGRISFDEYWTLIGGITG   86 (100)
T ss_dssp             HHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence            467899999999999999999999999987654

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=96.94  E-value=0.0006  Score=35.94  Aligned_cols=32  Identities=31%  Similarity=0.417  Sum_probs=26.7

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGF   71 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~   71 (87)
                      .++..+|..+|.+++|.|+.+|+..++.....
T Consensus        45 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~   76 (81)
T 1c7v_A           45 AEVEEAMKEADEDGNGVIDIPEFMDLIKKSKN   76 (81)
T ss_dssp             HHHHHHHHHHCSSGGGSEEHHHHHHHHHCC--
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhh
Confidence            45788899999999999999999999876543

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=96.94  E-value=0.0012  Score=36.64  Aligned_cols=29  Identities=28%  Similarity=0.323  Sum_probs=25.6

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      +++..+|+.+|.|++|.|+.+|+..+++.
T Consensus        80 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           80 TETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             HHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            34778899999999999999999998875

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=96.89  E-value=0.00086  Score=50.03  Aligned_cols=44  Identities=9%  Similarity=0.102  Sum_probs=36.6

Q ss_pred             HHHHHHHHhh--hhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFE--LFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~--~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ....|+++|.  .||.|++|+|+.+||..+|+.     ...+++.++++++
T Consensus       144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d  189 (799)
T 2zkm_X          144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DRKRVEAALSACH  189 (799)
T ss_dssp             HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTT
T ss_pred             HHHHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhC
Confidence            3567999999  899999999999999998854     3678888887764

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=96.87  E-value=0.0044  Score=33.23  Aligned_cols=30  Identities=23%  Similarity=0.443  Sum_probs=26.4

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++..+|..+|.+++|.|+.+|+..++...
T Consensus        45 ~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~   74 (92)
T 2kn2_A           45 EEVEQMIKEADLDGDGQVNYEEFVKMMMTV   74 (92)
T ss_dssp             HHHHHHHHHHCSSCCSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence            357788999999999999999999988765

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=96.87  E-value=0.0013  Score=34.12  Aligned_cols=30  Identities=30%  Similarity=0.440  Sum_probs=25.9

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      ..++..+|..+|.+++|.|+.+|+..++..
T Consensus        42 ~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   71 (77)
T 2joj_A           42 KPEILELMNEYDREGNGYIGFDDFLDIMTE   71 (77)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            345788999999999999999999988764

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=96.87  E-value=0.0017  Score=33.90  Aligned_cols=30  Identities=33%  Similarity=0.418  Sum_probs=26.3

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      +++..+|..+|.+++|.|+.+|+..++...
T Consensus        38 ~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~   67 (78)
T 1k9u_A           38 DEVQRMMAEIDTDGDGFIDFNEFISFCNAN   67 (78)
T ss_dssp             HHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            457788999999999999999999988764

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=96.84  E-value=0.0013  Score=35.72  Aligned_cols=30  Identities=20%  Similarity=0.368  Sum_probs=25.9

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++..+|..+|.|++|.|+.+|+..++..+
T Consensus        61 ~~~~~~~~~~D~d~dg~I~~~EF~~~~~~~   90 (91)
T 2pmy_A           61 ADAEAVFQRLDADRDGAITFQEFARGFLGS   90 (91)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHTHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence            357788999999999999999999888653

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=96.82  E-value=0.0018  Score=34.39  Aligned_cols=30  Identities=33%  Similarity=0.448  Sum_probs=26.9

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++..+|..+|.+++|.|+.+|+..++...
T Consensus        46 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   75 (86)
T 2opo_A           46 DEVRRMMAEIDTDGDGFISFDEFTDFARAN   75 (86)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence            457889999999999999999999998875

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=96.81  E-value=0.0017  Score=33.47  Aligned_cols=29  Identities=28%  Similarity=0.527  Sum_probs=25.8

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ++..+|..+|.+++|.|+.+|+..++..+
T Consensus        46 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~   74 (76)
T 1qx2_A           46 TLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             SHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            47788999999999999999999988765

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=96.78  E-value=0.0011  Score=37.41  Aligned_cols=31  Identities=16%  Similarity=0.258  Sum_probs=26.6

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .+++..+|+.+|.|++|.|+.+|+..++..+
T Consensus        52 ~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~   82 (101)
T 3nso_A           52 ECDYNKFMSVLDTNKDCEVDFVEYVRSLACL   82 (101)
T ss_dssp             HHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            3568888999999999999999999887754

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=96.77  E-value=0.00072  Score=37.93  Aligned_cols=26  Identities=27%  Similarity=0.534  Sum_probs=22.6

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHH
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAM   66 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l   66 (87)
                      ++..+|+.+|.|++|.|+.+|+..+|
T Consensus        73 ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           73 ELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             THHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             HHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            36778999999999999999998765

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=96.75  E-value=0.0022  Score=34.97  Aligned_cols=30  Identities=20%  Similarity=0.338  Sum_probs=26.4

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++..+|..+|.|++|.|+.+|+..++..+
T Consensus        56 ~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~   85 (99)
T 1qls_A           56 GVLDRMMKKLDLDSDGQLDFQEFLNLIGGL   85 (99)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            457888999999999999999999988764

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=96.72  E-value=0.0025  Score=34.20  Aligned_cols=29  Identities=45%  Similarity=0.593  Sum_probs=25.5

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      .++..+|..+|.+++|.|+.+|+..++..
T Consensus        56 ~~~~~l~~~~D~~~dg~i~~~eF~~~~~~   84 (90)
T 1avs_A           56 EELDAIIEEVDEDGSGTIDFEEFLVMMVR   84 (90)
T ss_dssp             HHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            45778899999999999999999988865

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=96.71  E-value=0.0017  Score=37.93  Aligned_cols=30  Identities=10%  Similarity=0.186  Sum_probs=26.1

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      +.+.++|+.+|.|++|.|+.+|+..++..+
T Consensus        55 ~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l   84 (121)
T 4drw_A           55 LAVDKIMKDLDQCRDGKVGFQSFFSLIAGL   84 (121)
T ss_dssp             THHHHHHHHHCTTCSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            457788999999999999999999887654

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=96.71  E-value=0.0015  Score=36.21  Aligned_cols=28  Identities=32%  Similarity=0.463  Sum_probs=24.6

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      +++..+|+.+|.|++|.|+.+|+..+++
T Consensus        81 ~~~~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           81 AETKAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            4478889999999999999999998874

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=96.65  E-value=0.00071  Score=34.55  Aligned_cols=28  Identities=18%  Similarity=0.342  Sum_probs=24.7

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      .++..+|..+|.+++|.|+.+|+..++.
T Consensus        42 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~   69 (71)
T 2b1u_A           42 EELDAMIREADVDQDGRVNYEEFARMLA   69 (71)
T ss_dssp             HHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            4578899999999999999999998774

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=96.65  E-value=0.0028  Score=36.79  Aligned_cols=31  Identities=26%  Similarity=0.383  Sum_probs=27.1

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      +++..+|+.+|.|++|.|+.+|+..++...+
T Consensus        77 ~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~~  107 (135)
T 3h4s_E           77 EDAQGMVREGDLDGDGALNQTEFCVLMVRLS  107 (135)
T ss_dssp             HHHHHHHHHHCSSCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCCcHHHHHHHHHHhC
Confidence            3477889999999999999999999998763

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=96.64  E-value=0.003  Score=34.56  Aligned_cols=28  Identities=29%  Similarity=0.480  Sum_probs=24.3

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      +++..+|+.+|.|++|.|+.+|+..++.
T Consensus        65 ~e~~~l~~~~D~d~dG~I~~~EF~~~~~   92 (94)
T 2kz2_A           65 EEVDEMIREADIDGDGQVNYEEFVQMMT   92 (94)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            3467789999999999999999998875

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=96.64  E-value=0.0041  Score=46.60  Aligned_cols=45  Identities=11%  Similarity=0.161  Sum_probs=39.4

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhC-CC---------CCHHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALG-FE---------MTEEHGIVLVCTI   85 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg-~~---------~~~~ei~~li~~~   85 (87)
                      .+++.+|+.||.+++|+|+. +|+.+|+..+ ..         ++.++++.||+..
T Consensus       229 ~EI~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~ky  283 (816)
T 3qr0_A          229 SEIEGIFKELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDY  283 (816)
T ss_dssp             THHHHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHh
Confidence            46899999999999999999 9999999986 33         6789999999764

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=96.61  E-value=0.002  Score=34.69  Aligned_cols=30  Identities=27%  Similarity=0.526  Sum_probs=26.0

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++..+|..+|.|++|.|+.+|+..++..+
T Consensus        52 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~   81 (93)
T 1k2h_A           52 DAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (93)
T ss_dssp             HHHHHHHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            457788999999999999999999888764

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=96.60  E-value=0.0023  Score=35.72  Aligned_cols=31  Identities=32%  Similarity=0.563  Sum_probs=26.6

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .+++.++|+.+|.|++|.|+.+|+..+|..+
T Consensus        44 ~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~   74 (99)
T 1qjt_A           44 DLILGKIWDLADTDGKGVLSKQEFFVALRLV   74 (99)
T ss_dssp             HHHHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence            3458888999999999999999999988653

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=96.58  E-value=0.0025  Score=35.27  Aligned_cols=30  Identities=10%  Similarity=0.186  Sum_probs=25.9

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++..+|+.+|.|++|.|+.+|+..++..+
T Consensus        49 ~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~   78 (96)
T 1a4p_A           49 LAVDKIMKDLDQCRDGKVGFQSFFSLIAGL   78 (96)
T ss_dssp             THHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            357788999999999999999999888754

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=96.55  E-value=0.0035  Score=34.23  Aligned_cols=30  Identities=27%  Similarity=0.422  Sum_probs=25.6

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      +++..+|..+|.|++|.|+.+|+..++..+
T Consensus        43 ~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~   72 (92)
T 1fi6_A           43 LELSHIWELSDFDKDGALTLDEFCAAFHLV   72 (92)
T ss_dssp             HHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence            457888999999999999999999887643

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=96.55  E-value=0.0029  Score=34.99  Aligned_cols=29  Identities=28%  Similarity=0.438  Sum_probs=25.4

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      +++..+|..+|.+++|.|+.+|+..++..
T Consensus        81 ~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  109 (110)
T 1pva_A           81 AETKAFLKAADKDGDGKIGIDEFETLVHE  109 (110)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence            45788899999999999999999988763

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=96.55  E-value=0.0022  Score=37.81  Aligned_cols=34  Identities=21%  Similarity=0.249  Sum_probs=26.1

Q ss_pred             CCCHHHHHHH-HHHhhhhCCCCCCcccHHHHHHHH
Q 048414           33 GLSQQKKQEI-KEAFELFDTDGSGTIDAKELNVAM   66 (87)
Q Consensus        33 ~~~~~~~~~l-~~~F~~~D~d~~G~I~~~el~~~l   66 (87)
                      .++.++...+ ..+|..+|.|++|.|+.+|+..+|
T Consensus       108 ~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  142 (143)
T 3a4u_B          108 LMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL  142 (143)
T ss_dssp             -CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence            4666666554 688899999999999999998765

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=96.54  E-value=0.0044  Score=34.36  Aligned_cols=30  Identities=10%  Similarity=0.118  Sum_probs=26.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      ...+..+|..+|.|++|.|+.+|+..++..
T Consensus        71 ~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  100 (103)
T 1snl_A           71 LRMREHVMKNVDTNQDRLVTLEEFLASTQR  100 (103)
T ss_dssp             HHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCCCCcCCHHHHHHHHhc
Confidence            345888999999999999999999988753

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=96.54  E-value=0.0035  Score=35.60  Aligned_cols=30  Identities=27%  Similarity=0.489  Sum_probs=25.5

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      +++..+|+.+|.|++|.|+.+|+..++..+
T Consensus        48 ~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~   77 (111)
T 2kgr_A           48 AQLASIWNLSDIDQDGKLTAEEFILAMHLI   77 (111)
T ss_dssp             HHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            357778999999999999999999887653

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=96.53  E-value=0.004  Score=35.42  Aligned_cols=31  Identities=23%  Similarity=0.330  Sum_probs=27.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ..++..+|+.+|.|++|.|+.+|+..++..+
T Consensus        55 ~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   85 (113)
T 1xk4_C           55 EKVIEHIMEDLDTNADKQLSFEEFIMLMARL   85 (113)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence            4568889999999999999999999888754

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=96.53  E-value=0.0042  Score=35.23  Aligned_cols=29  Identities=34%  Similarity=0.473  Sum_probs=25.2

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      +++.++|+.+|.|++|.|+.+|+..++..
T Consensus        48 ~el~~i~~~~D~d~dG~id~~EF~~~m~~   76 (106)
T 1eh2_A           48 DILGRVWELSDIDHDGMLDRDEFAVAMFL   76 (106)
T ss_dssp             HHHHHHHHHHCSSCSSBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            35778899999999999999999987764

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=96.52  E-value=0.0038  Score=34.81  Aligned_cols=30  Identities=20%  Similarity=0.321  Sum_probs=26.2

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++..+|+.+|.|++|.|+.+|+..++..+
T Consensus        53 ~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   82 (99)
T 2y5i_A           53 MLVEKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (99)
T ss_dssp             HHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            457888999999999999999999888754

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=96.51  E-value=0.0032  Score=34.78  Aligned_cols=29  Identities=28%  Similarity=0.422  Sum_probs=25.3

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      +++..+|+.+|.+++|.|+.+|+..++..
T Consensus        80 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 1rwy_A           80 KETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             HHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence            44778899999999999999999988764

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=96.50  E-value=0.0021  Score=34.33  Aligned_cols=30  Identities=23%  Similarity=0.293  Sum_probs=26.0

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++..+|+.+|.|++|.|+.+|+..++..+
T Consensus        51 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   80 (90)
T 1k8u_A           51 AEIARLMEDLDRNKDQEVNFQEYVTFLGAL   80 (90)
T ss_dssp             HHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            457888999999999999999999888654

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=96.50  E-value=0.0015  Score=33.94  Aligned_cols=28  Identities=21%  Similarity=0.608  Sum_probs=24.9

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      +..+|..+|.+++|.|+.+|+..++..+
T Consensus        49 ~~~~~~~~D~~~dg~i~~~eF~~~~~~~   76 (78)
T 1cb1_A           49 LDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             SSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCCcHHHHHHHHHHh
Confidence            5678999999999999999999988765

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=96.49  E-value=0.0042  Score=34.26  Aligned_cols=28  Identities=29%  Similarity=0.402  Sum_probs=24.5

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      +++..+|+.+|.+++|.|+.+|+..++.
T Consensus        80 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           80 AETKAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            4477889999999999999999998775

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=96.47  E-value=0.0057  Score=40.18  Aligned_cols=42  Identities=17%  Similarity=0.203  Sum_probs=30.4

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVC   83 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~   83 (87)
                      +..+|+.||.|++|+|+..|+..+|..+...-..+.++-+++
T Consensus       134 a~~lf~~FD~~~~G~I~f~ef~~aLs~l~rG~leeKL~w~F~  175 (261)
T 1eg3_A          134 LNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFK  175 (261)
T ss_dssp             HHHHHHHHCTTCCSEEEHHHHHHHHHHTSSSCHHHHHHHHHH
T ss_pred             HHHHHHHccCCCCceEeHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence            455899999999999999999998887643333334444443

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=96.45  E-value=0.0036  Score=34.52  Aligned_cols=30  Identities=20%  Similarity=0.407  Sum_probs=26.2

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++..+|+.+|.|++|.|+.+|+..++..+
T Consensus        52 ~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   81 (95)
T 1j55_A           52 DAVDKLLKDLDANGDAQVDFSEFIVFVAAI   81 (95)
T ss_dssp             CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence            467888999999999999999999888653

>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3

Probab=96.44  E-value=0.00054  Score=41.70  Aligned_cols=45  Identities=18%  Similarity=0.051  Sum_probs=34.4

Q ss_pred             HHHHHHhhhhCCC-CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTD-GSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d-~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++-.|..||.| ++|+|+..||..+++.+.  ..+.-+..+++.++
T Consensus        77 ~~l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~--~~e~cv~~ff~~cD  122 (151)
T 1sra_A           77 FPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCD  122 (151)
T ss_dssp             HHHHHHHHHHCCTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHC
T ss_pred             hHHHhHHHHHCCCCCCCcCcHHHHHHHHHHhc--ChHHHHHHHHHHhC
Confidence            3788999999997 999999999998876542  44455677666554

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=96.43  E-value=0.0034  Score=34.61  Aligned_cols=30  Identities=20%  Similarity=0.272  Sum_probs=26.2

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++..+|+.+|.|++|.|+.+|+..++..+
T Consensus        55 ~~v~~~~~~~D~d~dG~I~f~EF~~~~~~~   84 (95)
T 2wcb_A           55 AVIDEIFQGLDANQDEQVDFQEFISLVAIA   84 (95)
T ss_dssp             HHHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            467888999999999999999999887653

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=96.42  E-value=0.0026  Score=35.17  Aligned_cols=28  Identities=29%  Similarity=0.432  Sum_probs=24.4

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      +++..+|+.+|.+++|.|+.+|+..++.
T Consensus        81 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~  108 (109)
T 1bu3_A           81 AETKAFLKAGDSDGDGAIGVDEWAALVK  108 (109)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            4577889999999999999999998764

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=96.38  E-value=0.0026  Score=34.75  Aligned_cols=29  Identities=28%  Similarity=0.424  Sum_probs=25.7

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ++..+|+.+|.|++|.|+.+|+..++..+
T Consensus        51 ~i~~~~~~~D~d~dG~I~f~EF~~~~~~~   79 (92)
T 2kax_A           51 SIDDLMKSLDKNSDQEIDFKEYSVFLTML   79 (92)
T ss_dssp             THHHHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            47788999999999999999999988764

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=96.33  E-value=0.0042  Score=35.75  Aligned_cols=30  Identities=13%  Similarity=0.303  Sum_probs=25.5

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      +++..+|+.+|.|++|.|+.+|+..++...
T Consensus        65 ~ev~~li~~~D~dgdG~Idf~EF~~~m~~~   94 (113)
T 2lnk_A           65 AAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   94 (113)
T ss_dssp             THHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence            357778999999999999999999887653

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=96.32  E-value=0.0038  Score=34.42  Aligned_cols=28  Identities=32%  Similarity=0.510  Sum_probs=24.5

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      +++..+|+.+|.+++|.|+.+|+..+++
T Consensus        80 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           80 SETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             HHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence            3578889999999999999999998764

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=96.32  E-value=0.0052  Score=33.39  Aligned_cols=29  Identities=14%  Similarity=0.281  Sum_probs=25.4

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ++..+|+.+|.|++|.|+.+|+..++..+
T Consensus        50 ~~~~l~~~~D~d~dG~I~~~EF~~~~~~~   78 (93)
T 1xk4_A           50 GADVWFKELDINTDGAVNFQEFLILVIKM   78 (93)
T ss_dssp             CHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            45788999999999999999999888754

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=96.29  E-value=0.0027  Score=34.95  Aligned_cols=29  Identities=17%  Similarity=0.378  Sum_probs=25.2

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      +++..+|+.+|.|++|.|+.+|+..++..
T Consensus        44 ~~~~~i~~~~D~d~dG~i~~~EF~~~~~~   72 (95)
T 1c07_A           44 TLLAHIWSLCDTKDCGKLSKDQFALAFHL   72 (95)
T ss_dssp             HHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence            45788899999999999999999887754

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=96.26  E-value=0.0063  Score=32.24  Aligned_cols=35  Identities=9%  Similarity=-0.045  Sum_probs=28.3

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      .++..+.+.+..+|..+|.+++|.|+. |+..++..
T Consensus        46 ~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~   80 (86)
T 1j7q_A           46 TYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK   80 (86)
T ss_dssp             CCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence            455555445888999999999999999 99988765

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=96.16  E-value=0.0043  Score=35.22  Aligned_cols=30  Identities=13%  Similarity=0.215  Sum_probs=26.1

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      +++..+|+.+|.|++|.|+.+|+..++...
T Consensus        62 ~ev~~li~~~D~d~dG~Idf~EF~~~~~~~   91 (106)
T 2h2k_A           62 GSLDEKMKSLDVNQDSELKFNEYWRLIGEL   91 (106)
T ss_dssp             CCHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            357888999999999999999999887654

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=96.09  E-value=0.0033  Score=33.05  Aligned_cols=27  Identities=22%  Similarity=0.325  Sum_probs=22.8

Q ss_pred             HHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           43 KEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        43 ~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ..+|..+|.+++|.|+.+|+...+..+
T Consensus        52 ~~~~~~~D~~~dg~I~~~eF~~~~~~~   78 (83)
T 1yx7_A           52 AKLIKMADKNSDGKISKEEFLNANAEL   78 (83)
T ss_dssp             HHHHTTTCSSSCSCCSHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCcHHHHHHhhHHH
Confidence            348999999999999999999776543

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=96.03  E-value=0.0036  Score=34.91  Aligned_cols=29  Identities=21%  Similarity=0.284  Sum_probs=24.8

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ++..+|+.+|.|++|.|+.+|+..++..+
T Consensus        53 ev~~l~~~~D~d~dG~I~f~EF~~~~~~~   81 (100)
T 1psr_A           53 YLADVFEKKDKNEDKKIDFSEFLSLLGDI   81 (100)
T ss_dssp             GGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            46678889999999999999999888653

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=96.00  E-value=0.0033  Score=37.20  Aligned_cols=30  Identities=20%  Similarity=0.139  Sum_probs=25.9

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++..+|..+|.|++|.|+.+|+..++...
T Consensus        86 ~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~  115 (150)
T 2jjz_A           86 LEMKKMISEVTGGVSDTISYRDFVNMMLGK  115 (150)
T ss_dssp             HHHHHHHHHHHTTSCSSBCHHHHHHHHHSS
T ss_pred             HHHHHHHHHHCCCCCCcEeHHHHHHHHHHh
Confidence            357788999999999999999999988753

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=95.96  E-value=0.01  Score=35.44  Aligned_cols=30  Identities=23%  Similarity=0.431  Sum_probs=25.6

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      +++.++++..|.|++|.|+.+|+..+|..+
T Consensus        84 ~el~~I~~~~D~d~dG~Ld~~EF~~am~li  113 (139)
T 2jq6_A           84 TVLGKIWKLADVDKDGLLDDEEFALANHLI  113 (139)
T ss_dssp             HHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            357888999999999999999999887643

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=95.92  E-value=0.0081  Score=33.00  Aligned_cols=30  Identities=3%  Similarity=0.182  Sum_probs=24.9

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++..+|..+|.+++|.|+.+|+..++...
T Consensus        60 ~e~~~l~~~~d~~~~g~i~~~eF~~~~~~~   89 (105)
T 1wlz_A           60 EQFDRLWNEMPVNAKGRLKYPDFLSRFSSE   89 (105)
T ss_dssp             HHHHHHHTTSCBCTTSCBCHHHHHHHHC--
T ss_pred             HHHHHHHHHcCCCCCCCCcHHHHHHHHhcc
Confidence            346788999999999999999999988754

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=95.89  E-value=0.0099  Score=32.94  Aligned_cols=30  Identities=13%  Similarity=0.095  Sum_probs=25.7

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++..+|..+|.+++|.|+.+|+..++...
T Consensus        68 ~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~   97 (107)
T 2d58_A           68 LELKKLIGEVSSGSGETFSYPDFLRMMLGK   97 (107)
T ss_dssp             HHHHHHHHHHCSSSSSEECHHHHHHHHSSS
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHHHc
Confidence            457788999999999999999999888643

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=95.88  E-value=0.0092  Score=33.91  Aligned_cols=29  Identities=28%  Similarity=0.440  Sum_probs=25.0

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ++..+|+.+|.|++|.|+.+|+..+|..+
T Consensus        57 el~~i~~~~D~d~dG~I~~~EF~~~m~~~   85 (110)
T 1iq3_A           57 ELSYIWELSDADCDGALTLPEFCAAFHLI   85 (110)
T ss_dssp             CHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            47788999999999999999999877643

>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3

Probab=95.66  E-value=0.0077  Score=36.57  Aligned_cols=29  Identities=21%  Similarity=0.173  Sum_probs=25.5

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      ...+...|..+|.|++|.|+.+|+..+|.
T Consensus       111 e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg  139 (151)
T 1sra_A          111 EHCTTRFFETCDLDNDKYIALDEWAGCFG  139 (151)
T ss_dssp             GGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHhC
Confidence            34578999999999999999999998874

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=95.64  E-value=0.0076  Score=44.67  Aligned_cols=38  Identities=11%  Similarity=0.306  Sum_probs=22.6

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      +.++.+|+.| .|++|+|+.+||+.+|.       .++++.+|..+
T Consensus       798 ~~l~~aF~~~-~d~~G~Is~~El~~~l~-------~~~~~~l~~~~  835 (863)
T 1sjj_A          798 DQVMASFKIL-AGDKNYITVDELRRELP-------PDQAEYCIARM  835 (863)
T ss_dssp             HHHHHHHHGG-GTSSSEEEHHHHHHHSC-------HHHHHHHHHHS
T ss_pred             HHHHHHHHHH-hCCCCcCcHHHHHHHCC-------HHHHHHHHHHc
Confidence            3456666666 56666666666666552       45566665544

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=95.62  E-value=0.0038  Score=33.07  Aligned_cols=26  Identities=46%  Similarity=0.552  Sum_probs=22.1

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVA   65 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~   65 (87)
                      +++..+|..+|.+++|.|+.+|+..+
T Consensus        59 ~~~~~l~~~~d~~~~g~i~~~eF~~~   84 (87)
T 1s6j_A           59 SEIKDLMDAADIDKSGTIDYGEFIAA   84 (87)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHTTC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence            45778899999999999999998654

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=95.55  E-value=0.005  Score=35.57  Aligned_cols=33  Identities=24%  Similarity=0.387  Sum_probs=27.8

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      ..+++..+|+.+|.|++|.|+.+|+..++..+.
T Consensus        78 t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~~  110 (123)
T 2kld_A           78 TDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLE  110 (123)
T ss_dssp             SHHHHHHHHHHHSSSSCCEECSHHHHHCSCTTT
T ss_pred             CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence            345678899999999999999999998876554

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=95.36  E-value=0.025  Score=33.07  Aligned_cols=35  Identities=29%  Similarity=0.567  Sum_probs=28.4

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ..++.   +.|.+++...|.|++|.|+.+|+..+|.-+
T Consensus        61 sgLp~---~~L~~Iw~laD~d~dG~Ld~~EF~~aM~Li   95 (121)
T 3fia_A           61 SGLPQ---PVLAQIWALADMNNDGRMDQVEFSIAMKLI   95 (121)
T ss_dssp             GCCCH---HHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             cCCCH---HHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence            45654   447888999999999999999999887643

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=95.30  E-value=0.0039  Score=34.39  Aligned_cols=27  Identities=33%  Similarity=0.491  Sum_probs=24.0

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      ++..+|..+|.+++|.|+.+|+..+++
T Consensus        81 ~~~~~~~~~D~d~dg~i~~~eF~~~~~  107 (108)
T 2kyc_A           81 ETKTFLAAADHDGDGKIGAEEFQEMVQ  107 (108)
T ss_dssp             TTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence            467889999999999999999998875

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=95.13  E-value=0.025  Score=33.22  Aligned_cols=29  Identities=14%  Similarity=0.132  Sum_probs=25.1

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      .++..+|..+|.|++|.|+.+|+..++..
T Consensus        84 ~~~~~l~~~~D~d~dg~I~~~eF~~~~~~  112 (147)
T 1wy9_A           84 LELKRLIREVSSGSEETFSYSDFLRMMLG  112 (147)
T ss_dssp             HHHHHHHHHHCSSCTTEECHHHHHHHHCS
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            35778899999999999999999988753

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=94.77  E-value=0.023  Score=42.96  Aligned_cols=42  Identities=12%  Similarity=0.189  Sum_probs=30.6

Q ss_pred             HHHHHHHhhh--hCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           39 KQEIKEAFEL--FDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~--~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ...|+++|..  +|+|++|.|+.++|..+|+.     +..++..+++++
T Consensus       149 ~~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~-----~~~~v~~l~~~~  192 (885)
T 3ohm_B          149 NTFLRKAYTKLKLQVNQDGRIPVKNILKMFSA-----DKKRVETALESC  192 (885)
T ss_dssp             HHHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG-----GHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhcCccCCCCccCHHHHHHHHhc-----CHHHHHHHHHHh
Confidence            4568889998  89999999999988876653     234555555443

>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}

Probab=94.71  E-value=0.052  Score=32.88  Aligned_cols=31  Identities=19%  Similarity=0.314  Sum_probs=27.9

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .+.++.+|+.+|.|++|.|+..|-..+|+.-
T Consensus        14 ~eAi~~~H~~lDdD~dG~Id~~Es~~Flre~   44 (150)
T 2l5y_A           14 LEALQTIHKQMDDDKDGGIEVEESDEFIRED   44 (150)
T ss_dssp             HHHHHHHHHHHSSSCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCCCcHHHHHHHHHHH
Confidence            4678999999999999999999999999863

>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*

Probab=94.67  E-value=0.0062  Score=39.20  Aligned_cols=45  Identities=18%  Similarity=0.048  Sum_probs=32.7

Q ss_pred             HHHHHHHhhhhCC-CCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDT-DGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~-d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ...+...|..||. |++|+|+..||..+++.+.  ....-+..+|+..
T Consensus       154 ~~~v~w~F~~lD~~n~dg~l~~~El~~i~~~l~--~~~~c~~~~~~~c  199 (229)
T 1nub_A          154 IFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETC  199 (229)
T ss_dssp             HHHHHHHHHHHTTTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHH
T ss_pred             hHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh--hHHHHHHHHHHHc
Confidence            4567888999999 8999999999998876542  1233345555544

>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}

Probab=91.12  E-value=0.056  Score=32.74  Aligned_cols=30  Identities=23%  Similarity=0.495  Sum_probs=26.7

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      .+.++.+|+.+|.|.+|.|+..|-..+|+.
T Consensus        14 ~eAi~~lH~~lDdD~dG~Id~~Es~~flre   43 (150)
T 2k60_A           14 FEAVRNIHKLMDDDANGDVDVEESDEFLRE   43 (150)
T ss_dssp             HHHHHHHHHTTCTTCSSEECTTTTTTHHHH
T ss_pred             hHHHHHHHHhcCCCCCCcccHHHHHHHHHH
Confidence            578999999999999999999998888775

>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*

Probab=90.61  E-value=0.18  Score=32.30  Aligned_cols=27  Identities=22%  Similarity=0.156  Sum_probs=24.3

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      .+...|+..|.|+||.|+.+|+..+|.
T Consensus       191 c~~~~~~~cD~n~D~~is~~Ew~~cf~  217 (229)
T 1nub_A          191 CTTRFFETCDLDNDKYIALDEWAGCFG  217 (229)
T ss_dssp             GHHHHHHHHCTTCSSCEEHHHHHHHTT
T ss_pred             HHHHHHHHcCCCCCCcCCHHHHHHHhC
Confidence            467889999999999999999999885

>2dmp_A Zinc fingers and homeoboxes protein 2; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.00  E-value=1.4  Score=23.89  Aligned_cols=46  Identities=11%  Similarity=0.022  Sum_probs=37.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|...|..     +.+.+..+...+...+|  ++...|..+|+.
T Consensus        18 k~~t~~Ql~~Le~~F~~-----~~yp~~~~r~~La~~~~--l~~~qV~vWFqN   63 (89)
T 2dmp_A           18 KEKTQGQVKILEDSFLK-----SSFPTQAELDRLRVETK--LSRREIDSWFSE   63 (89)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHHT--CCHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHcc-----CCCCCHHHHHHHHHHhC--CCHHhccHhhHh
Confidence            45899999999999975     35888888888877776  688888888753

>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=89.45  E-value=0.4  Score=27.77  Aligned_cols=28  Identities=14%  Similarity=0.234  Sum_probs=23.6

Q ss_pred             HHHHhhhhCCCC--------CCcccHHHHHHHHHHh
Q 048414           42 IKEAFELFDTDG--------SGTIDAKELNVAMRAL   69 (87)
Q Consensus        42 l~~~F~~~D~d~--------~G~I~~~el~~~l~~l   69 (87)
                      ...+|+.||.++        +|.|+..|+..+|.-+
T Consensus        71 ~~~lF~~Fd~~~~~~~~~~~~g~I~fkefi~~LSll  106 (118)
T 1tuz_A           71 SLALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLL  106 (118)
T ss_dssp             HHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHhcccccccccCCCCeEeHHHHHHHHHHh
Confidence            466899999875        8999999999888765

>2ecc_A Homeobox and leucine zipper protein homez; homeobox domain, transcription factor, leucine zipper- containing factor, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1

Probab=89.12  E-value=1.6  Score=23.28  Aligned_cols=46  Identities=9%  Similarity=0.027  Sum_probs=38.1

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|+..|..     +-+.+..+...+...+|  +++.+|...|+.
T Consensus         8 ~kfT~~Ql~~Le~~F~~-----~~YPs~~er~~LA~~tg--Lte~qIkvWFqN   53 (76)
T 2ecc_A            8 KRKTKEQLAILKSFFLQ-----CQWARREDYQKLEQITG--LPRPEIIQWFGD   53 (76)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHTC--CCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHHC--cCHHHhhHHhHh
Confidence            46899999999999983     46899999999888877  688888887754

>2dmt_A Homeobox protein BARH-like 1; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.91  E-value=1.9  Score=22.71  Aligned_cols=46  Identities=9%  Similarity=0.086  Sum_probs=37.8

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++..++..|...|..     +-+.+..+...+...+|  ++...|..+|+.
T Consensus        22 t~ft~~Q~~~Le~~F~~-----~~yp~~~~r~~LA~~l~--L~~~qV~vWFqN   67 (80)
T 2dmt_A           22 TVFTELQLMGLEKRFEK-----QKYLSTPDRIDLAESLG--LSQLQVKTWYQN   67 (80)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHHC--CCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHh-----cCCCCHHHHHHHHHHhC--CCHHHeeeccHH
Confidence            67999999999999975     45899988888888776  678888887753

>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}

Probab=87.59  E-value=1.2  Score=31.82  Aligned_cols=48  Identities=10%  Similarity=0.025  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++...+..+|..+|.. +|+|+..+.+.+|..-|  ++...+..++.-++
T Consensus       454 ~~~~~~y~~~F~~~~~~-~g~i~g~~a~~~~~~s~--Lp~~~L~~IW~l~D  501 (550)
T 2qpt_A          454 TKDKSKYDEIFYNLAPA-DGKLSGSKAKTWMVGTK--LPNSVLGRIWKLSD  501 (550)
T ss_dssp             TTTHHHHHHHHHHTCCS-SSEECHHHHHHHHHHTT--CCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhcCCC-CCeecHHHHHHHHHHcC--CCHHHHHHHhcccC
Confidence            45788999999999965 59999999999998765  68888998887654

>1puf_A HOX-1.7, homeobox protein HOX-A9; homeodomian, protein-DNA complex, HOX hexapeptide, TALE homeodomain, homeodomain interaction; 1.90A {Mus musculus} SCOP: a.4.1.1 PDB: 1san_A

Probab=87.32  E-value=2  Score=22.41  Aligned_cols=45  Identities=13%  Similarity=0.164  Sum_probs=36.9

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVC   83 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~   83 (87)
                      ..++..++..|...|..     +.+.+..+...+-..+|  ++...|..+|+
T Consensus        18 t~ft~~Q~~~Le~~F~~-----~~yp~~~~r~~LA~~l~--l~~~qV~vWFq   62 (77)
T 1puf_A           18 CPYTKHQTLELEKEFLF-----NMYLTRDRRYEVARLLN--LTERQVKIWFQ   62 (77)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHHT--CCHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhc-----cCCCCHHHHHHHHHHHC--cCHHHHHHHHH
Confidence            57999999999999974     45889988888877777  57888887775

>2lbf_A 60S acidic ribosomal protein P1; ribosome, stalk, P1/P2; NMR {Homo sapiens}

Probab=85.77  E-value=2.5  Score=22.04  Aligned_cols=48  Identities=17%  Similarity=0.171  Sum_probs=38.2

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ..+......++=..|- + ..|+.+++..+|+..|..+....+..+++.+
T Consensus         4 ~~ela~~YAAllL~~~-g-~~~ta~~I~~il~AaGveve~~~~~lf~~aL   51 (69)
T 2lbf_A            4 VSELACIYSALILHDD-E-VTVTEDKINALIKAAGVNVEPFWPGLFAKAL   51 (69)
T ss_dssp             HHHHHHHHHHHHHHHH-T-CCCCHHHHHHHHHHHTCCCCTHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHcC-C-CCCCHHHHHHHHHHcCCCccHHHHHHHHHHH
Confidence            4566667777777776 3 4899999999999999999988888777654

>2dmu_A Homeobox protein goosecoid; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.65  E-value=2.4  Score=21.62  Aligned_cols=46  Identities=13%  Similarity=0.121  Sum_probs=37.8

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|..+|..     +-+.+..+...+...+|  ++...|..+|+.
T Consensus        12 t~ft~~q~~~Le~~F~~-----~~yp~~~~r~~LA~~l~--l~~~qV~~WFqN   57 (70)
T 2dmu_A           12 TIFTDEQLEALENLFQE-----TKYPDVGTREQLARKVH--LREEKVEVWFKN   57 (70)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHHT--CCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHc-----cCCCCHHHHHHHHHHHC--CCHHHeehcccc
Confidence            57899999999999975     46889988888888776  678888887753

>2dn0_A Zinc fingers and homeoboxes protein 3; triple homeobox 1 protein, KIAA0395, TIX1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.63  E-value=2.5  Score=21.94  Aligned_cols=46  Identities=11%  Similarity=0.101  Sum_probs=36.8

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|...|..     +-+.+..+...+...+|  ++...|..+|+.
T Consensus        13 ~~ft~~Ql~~Le~~F~~-----~~yp~~~~r~~La~~~~--l~~~qV~~WFqN   58 (76)
T 2dn0_A           13 NKKSHEQLSALKGSFCR-----NQFPGQSEVEHLTKVTG--LSTREVRKWFSD   58 (76)
T ss_dssp             CCCCHHHHHHHHHHHHH-----SSSCCSHHHHHHHHHHC--CCHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHhc-----CCCcCHHHHHHHHHHhC--CChHHhhHHhHH
Confidence            67999999999999964     45788888887777776  678888887753

>3nar_A ZHX1, zinc fingers and homeoboxes protein 1; corepressor, homeodomain, structural genomics, oxford production facility, OPPF, transcription; 2.60A {Homo sapiens}

Probab=85.19  E-value=3.2  Score=22.65  Aligned_cols=47  Identities=11%  Similarity=0.083  Sum_probs=37.9

Q ss_pred             CCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           31 HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        31 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ...++..++..|...|..     +.+.+..+...+...+|  ++...|...|+.
T Consensus        29 Rt~ft~~Ql~~Le~~F~~-----~~yp~~~~r~~LA~~l~--L~~~qV~vWFqN   75 (96)
T 3nar_A           29 ICKKTPEQLHMLKSAFVR-----TQWPSPEEYDKLAKESG--LARTDIVSWFGD   75 (96)
T ss_dssp             SSSSCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHHC--CCHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHHHH-----cCCCCHHHHHHHHHHhC--CCHHHeeecchh
Confidence            367899999999999974     46889998888888887  577788877763

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=85.17  E-value=1.1  Score=33.79  Aligned_cols=45  Identities=16%  Similarity=0.037  Sum_probs=35.0

Q ss_pred             HHHHHHHhhhh-------CCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELF-------DTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~-------D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++..+++..       |.+++|.|+.+|+..+++.+.   ...+|+.+++...
T Consensus       188 ~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~---~R~EI~eiF~~y~  239 (816)
T 3qr0_A          188 RARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL---ERSEIEGIFKELS  239 (816)
T ss_dssp             HHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC---CCTHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC---CHHHHHHHHHHHc
Confidence            34577777777       677889999999999999875   3458888887653

>2da3_A Alpha-fetoprotein enhancer binding protein; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics; NMR {Homo sapiens}

Probab=84.41  E-value=3  Score=21.72  Aligned_cols=46  Identities=11%  Similarity=0.150  Sum_probs=36.7

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|..+|..     +-+.+..+...+...+|  ++...|..+|+.
T Consensus        22 t~ft~~Ql~~Le~~f~~-----~~yp~~~~r~~La~~l~--l~~~qV~~WFqN   67 (80)
T 2da3_A           22 TTITPEQLEILYQKYLL-----DSNPTRKMLDHIAHEVG--LKKRVVQVWFQN   67 (80)
T ss_dssp             SSCCTTTHHHHHHHHHH-----CSSCCHHHHHHHHHHHT--SCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHh-----cCCCCHHHHHHHHHHHC--cCHHHhHHHhHH
Confidence            56899999999999975     25788888888877776  678888888753

>2jg6_A DNA-3-methyladenine glycosidase; 3-methyladenine-DNA-glycosylase-I, hydrolase; 1.70A {Staphylococcus aureus} PDB: 4aia_A* 4ai5_A* 4ai4_A

Probab=84.37  E-value=0.74  Score=28.77  Aligned_cols=49  Identities=18%  Similarity=0.236  Sum_probs=41.4

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ...+.++++|.-||.+.=-..+.+++..+|..-|+--....|+.+|..+
T Consensus        51 ~KRe~fR~AF~~FD~~~VA~~~e~dve~Ll~d~gIIRnr~KI~A~i~NA   99 (186)
T 2jg6_A           51 KKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQA   99 (186)
T ss_dssp             HHHHHHHHHTGGGCHHHHTTCCHHHHHHHTTCTTSCCCHHHHHHHHHHH
T ss_pred             HhHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCccchhhHHHHHHHHHHH
Confidence            3456799999999998888889999999998888888888888887754

>3a01_A Homeodomain-containing protein; homeodomain, protein-DNA complex, DNA-binding, homeobox, NUC developmental protein; 2.70A {Drosophila melanogaster}

Probab=84.23  E-value=3.5  Score=22.38  Aligned_cols=46  Identities=15%  Similarity=0.197  Sum_probs=36.9

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|...|..     +-+.+..+...+-..+|  ++...|..+|+.
T Consensus        22 t~ft~~Ql~~Le~~F~~-----~~yp~~~~r~~LA~~l~--L~~~qV~vWFqN   67 (93)
T 3a01_A           22 TSFTRIQVAELEKRFHK-----QKYLASAERAALARGLK--MTDAQVKTWFQN   67 (93)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSCCCHHHHHHHHHTTT--CCHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHc-----CCCcCHHHHHHHHHHhC--CChhhcccccHh
Confidence            67999999999999975     35788888888777666  688888887753

>2da5_A Zinc fingers and homeoboxes protein 3; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.82  E-value=3.2  Score=21.56  Aligned_cols=46  Identities=11%  Similarity=0.035  Sum_probs=37.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|...|..     +-+.+..+...+-..+|  ++...|..+|+.
T Consensus        12 ~~~t~~Ql~~Le~~F~~-----~~yp~~~~r~~LA~~l~--l~~~qV~~WFqN   57 (75)
T 2da5_A           12 KERAPEQLRALESSFAQ-----NPLPLDEELDRLRSETK--MTRREIDSWFSE   57 (75)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHHC--CCHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHhc-----cCCCCHHHHHHHHHHhC--CCHHHhhHhhHH
Confidence            56899999999999975     46888888888777776  688888888753

>1b72_A Protein (homeobox protein HOX-B1); homeodomain, DNA, complex, DNA-binding protein, protein/DNA complex; HET: DNA; 2.35A {Homo sapiens} SCOP: a.4.1.1

Probab=83.07  E-value=4  Score=22.22  Aligned_cols=47  Identities=9%  Similarity=0.162  Sum_probs=37.8

Q ss_pred             CCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           31 HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        31 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ...++.+++..|...|..     +.+.+..+...+-..+|  ++...|...|+.
T Consensus        38 Rt~ft~~Ql~~Le~~F~~-----~~yp~~~~r~~LA~~l~--l~~~qV~vWFqN   84 (97)
T 1b72_A           38 RTNFTTRQLTELEKEFHF-----NKYLSRARRVEIAATLE--LNETQVKIWFQN   84 (97)
T ss_dssp             CCCCCHHHHHHHHHHHTT-----CSSCCHHHHHHHHHHHT--CCHHHHHHHHHH
T ss_pred             CcCcCHHHHHHHHHHHhc-----cCCCCHHHHHHHHHHhC--CCHHHhHHHHHH
Confidence            367999999999999963     46899988888877776  578888877753

>3nau_A Zinc fingers and homeoboxes protein 2; ZHX2, corepressor, homeodomain, domain swapping, structural oxford protein production facility, OPPF; 2.70A {Homo sapiens}

Probab=82.48  E-value=3.7  Score=21.30  Aligned_cols=44  Identities=14%  Similarity=0.131  Sum_probs=36.2

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      -+.+++..|...|..     +-+++..+...+-..+|  ++..+|..+|+.
T Consensus        11 ~~~~Ql~~LE~~F~~-----~~YPs~~er~eLA~~tg--Lt~~qVkvWFqN   54 (66)
T 3nau_A           11 KTKEQIAHLKASFLQ-----SQFPDDAEVYRLIEVTG--LARSEIKKWFSD   54 (66)
T ss_dssp             CCHHHHHHHHHHHHG-----GGSCCHHHHHHHHHHHC--CCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhc-----CCCCCHHHHHHHHHHhC--cCHHHhhHhccc
Confidence            467889999999974     46899999999888886  688899888764

>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}

Probab=81.77  E-value=3.6  Score=20.67  Aligned_cols=31  Identities=26%  Similarity=0.371  Sum_probs=26.6

Q ss_pred             CcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           55 GTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        55 G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ..++.+++..+|+..|.......+..+++.+
T Consensus        15 ~~~t~~~I~~il~aaGveve~~~~~~~~~~L   45 (58)
T 3a1y_A           15 KEINEENLKAVLQAAGVEPEEARIKALVAAL   45 (58)
T ss_dssp             CCCCHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCccHHHHHHHHHHH
Confidence            3799999999999999999988887777654

>2ofk_A 3-methyladenine DNA glycosylase I, constitutive; DNA repair, base excision, helix-hairpin-helix, hydrolase; HET: PGE; 1.50A {Salmonella typhi} PDB: 2ofi_A* 1lmz_A 1nku_A 1p7m_A*

Probab=81.50  E-value=0.7  Score=28.79  Aligned_cols=48  Identities=10%  Similarity=0.245  Sum_probs=40.5

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ..+.++++|.-||.+.=-..+.+++..+|..-|+--....|+.+|..+
T Consensus        52 KRe~fr~AF~~Fd~~~VA~~~e~~ve~Ll~d~~IIRnr~KI~A~i~NA   99 (183)
T 2ofk_A           52 KRENYRACFHQFDPIRIAAMQEEDVERLLQNTGIIRHRGKIQAIISNA   99 (183)
T ss_dssp             THHHHHHHTGGGCHHHHHTCCHHHHHHHTTCTTSCCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHcCCCHHHHcCCCHHHHHHHhcCCcchhhHHHHHHHHHHH
Confidence            456799999999998877888999999998888878888888887754

>2lbf_B 60S acidic ribosomal protein P2; ribosome, stalk, P1/P2; NMR {Homo sapiens} PDB: 2w1o_A

Probab=81.36  E-value=1.7  Score=22.77  Aligned_cols=33  Identities=15%  Similarity=0.379  Sum_probs=27.5

Q ss_pred             CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           53 GSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        53 ~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      +...++.+++..+|+..|.......+..+++.+
T Consensus        15 g~~~~ta~~I~~il~aaGvevd~~~~~~~~~aL   47 (70)
T 2lbf_B           15 GNSSPSAKDIKKILDSVGIEADDDRLNKVISEL   47 (70)
T ss_dssp             TCSSCCHHHHHHHHHTTTCCCCTTHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCccHHHHHHHHHHH
Confidence            344799999999999999999888888777654

>2ecb_A Zinc fingers and homeoboxes protein 1; homeobox domain, transcription factor, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1

Probab=81.34  E-value=4.8  Score=21.91  Aligned_cols=46  Identities=13%  Similarity=0.097  Sum_probs=37.7

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|...|..     +-+++..+...+-..+|  +++.+|...|+.
T Consensus        16 k~~t~~Ql~~Le~~F~~-----~~yp~~~~r~~LA~~lg--Lte~qVkvWFqN   61 (89)
T 2ecb_A           16 KEKTAEQLRVLQASFLN-----SSVLTDEELNRLRAQTK--LTRREIDAWFTE   61 (89)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHTC--CCHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHh-----cCCCCHHHHHHHHHHhC--cChHHCeecccc
Confidence            47899999999999964     45899999998877776  688888887764

>2e1o_A Homeobox protein PRH; DNA binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.1

Probab=81.03  E-value=4  Score=20.76  Aligned_cols=46  Identities=15%  Similarity=0.185  Sum_probs=37.5

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|...|..     +-+.+..+...+...+|  ++...|..+|+.
T Consensus        12 ~~ft~~q~~~Le~~F~~-----~~yp~~~~r~~La~~l~--l~~~qV~~WFqN   57 (70)
T 2e1o_A           12 VRFSNDQTIELEKKFET-----QKYLSPPERKRLAKMLQ--LSERQVKTWFQN   57 (70)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHTT--CCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHc-----CCCcCHHHHHHHHHHHC--CCHHHhhHhhHh
Confidence            56999999999999964     46889988888877776  688888888753

>1bw5_A ISL-1HD, insulin gene enhancer protein ISL-1; DNA-binding protein, homeodomain, LIM domain; NMR {Rattus norvegicus} SCOP: a.4.1.1

Probab=80.68  E-value=3.9  Score=20.49  Aligned_cols=46  Identities=11%  Similarity=0.098  Sum_probs=37.1

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|..+|..     +.+.+..+...+...+|  ++...|...|+.
T Consensus         8 t~ft~~q~~~Le~~F~~-----~~yp~~~~r~~La~~l~--l~~~qV~~WFqN   53 (66)
T 1bw5_A            8 TVLNEKQLHTLRTCYAA-----NPRPDALMKEQLVEMTG--LSPRVIRVWFQN   53 (66)
T ss_dssp             CCCSHHHHHHHHHHHHH-----CSCCCHHHHHHHHHHHT--SCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhc-----CCCcCHHHHHHHHHHHC--cCHHHHHHHhHH
Confidence            57899999999999975     46888888888777776  678888877753

>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A

Probab=80.62  E-value=3.4  Score=24.66  Aligned_cols=32  Identities=19%  Similarity=0.187  Sum_probs=28.9

Q ss_pred             CCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           54 SGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        54 ~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      .+..+-+||...|+..|+.+++..+...++++
T Consensus        17 ~~~~tq~eL~~~L~~~G~~VtqaTisRDL~eL   48 (149)
T 1b4a_A           17 NDIETQDELVDRLREAGFNVTQATVSRDIKEM   48 (149)
T ss_dssp             SCCCSHHHHHHHHHHTTCCCCHHHHHHHHHHT
T ss_pred             CCCccHHHHHHHHHHcCCCcCHHHHHHHHHHc
Confidence            47899999999999999999999999888875

>2kt0_A Nanog, homeobox protein nanog; homeodomain, structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; NMR {Homo sapiens}

Probab=80.30  E-value=4.7  Score=21.18  Aligned_cols=47  Identities=6%  Similarity=0.075  Sum_probs=37.8

Q ss_pred             CCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           31 HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        31 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ...++..++..|..+|..     +.+.+..+...+-..+|  ++...|..+|+.
T Consensus        26 Rt~ft~~Q~~~Le~~F~~-----~~yp~~~~r~~La~~l~--l~~~qV~vWFqN   72 (84)
T 2kt0_A           26 RTVFSSTQLCVLNDRFQR-----QKYLSLQQMQELSNILN--LSYKQVKTWFQN   72 (84)
T ss_dssp             SSCCCHHHHHHHHHHHHH-----SSSCCHHHHHHHHHHTT--CCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHh-----CCCCCHHHHHHHHHHcC--CCHHHHHHHHHH
Confidence            367999999999999974     46888888888777776  678888888753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	87
d2hf5a1	33	a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien	2e-11
d1m45a_	146	a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye	8e-11
d1f54a_	77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	2e-10
d1wdcc_	152	a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop	6e-10
d1y1xa_	182	a.39.1.8 (A:) Programmed cell death 6 protein-like	8e-10
d1w7jb1	139	a.39.1.5 (B:11-149) Myosin Essential Chain {Human	9e-10
d1lkja_	146	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	1e-09
d1lkja_	146	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	1e-04
d2pq3a1	73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	2e-09
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	2e-09
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	2e-09
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	4e-09
d1ggwa_	140	a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo	4e-09
d1wdcb_	142	a.39.1.5 (B:) Myosin Essential Chain {Bay scallop	4e-09
d1s6ia_	182	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	1e-08
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	1e-08
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	3e-08
d2sasa_	185	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	4e-08
d1dtla_	156	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	4e-08
d1dtla_	156	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	6e-04
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	4e-08
d2scpa_	174	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	5e-08
d1qv0a_	189	a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr	6e-08
d1nyaa_	176	a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth	7e-08
d1nyaa_	176	a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth	3e-04
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	7e-08
d2obha1	141	a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien	8e-08
d2obha1	141	a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien	3e-04
d1wlza1	83	a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H	8e-08
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	9e-08
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	1e-07
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	3e-05
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	2e-07
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	0.002
d1hqva_	181	a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous	3e-07
d1qx2a_	76	a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax	4e-07
d1jbaa_	189	a.39.1.5 (A:) Guanylate cyclase activating protein	8e-07
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	9e-07
d1uhka1	187	a.39.1.5 (A:3-189) Calcium-regulated photoprotein	1e-06
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	1e-06
d2fcea1	61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	1e-06
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	2e-06
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	4e-06
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	5e-06
d1snla_	99	a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo	5e-06
d1jfja_	134	a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly	8e-06
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	9e-06
d1fi6a_	92	a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId:	1e-05
d1juoa_	172	a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId:	1e-05
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	2e-05
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	2e-05
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	7e-05
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	0.003
d1c07a_	95	a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId:	1e-04
d1c07a_	95	a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId:	0.002
d1auib_	165	a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch	1e-04
d1alva_	173	a.39.1.8 (A:) Calpain small (regulatory) subunit (	1e-04
d1cb1a_	78	a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax	2e-04
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	3e-04
d1df0a1	186	a.39.1.8 (A:515-700) Calpain large subunit, C-term	6e-04
d2zfda1	183	a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {	0.002
d1ctda_	34	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	0.003

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 51.1 bits (123), Expect = 2e-11
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 40 QEIKEAFELFDTDGSGTIDAKELNVAMRALG 70
          +EI+EAF +FD DG+G I A EL   M  LG
Sbjct: 3  EEIREAFRVFDKDGNGYISAAELRHVMTNLG 33

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.4 bits (124), Expect = 8e-11
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          +  K+ F LFD  G G I    L   +RA+G+  T + 
Sbjct: 2  RANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQL 39

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.0 bits (119), Expect = 2e-10
 Identities = 19/46 (41%), Positives = 28/46 (60%)

Query: 32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
            L++++  E KEAF LFD D +G+I + EL   MR+LG   +E  
Sbjct: 2  SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAE 47

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 50.4 bits (119), Expect = 6e-10
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 34 LSQQKKQEIKEAFELFDT--DGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT 84
          LSQ +  ++K+ FELFD      G +DA +L    R LG     E    +  T
Sbjct: 1  LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGT 53

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

 Score = 50.4 bits (119), Expect = 8e-10
 Identities = 16/39 (41%), Positives = 20/39 (51%)

Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
           QE+ E F   DTDGSG I   ELN A+ + G   +   
Sbjct: 17 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLAT 55

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (117), Expect = 9e-10
 Identities = 18/36 (50%), Positives = 19/36 (52%)

Query: 41 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          E KEAFELFD  G G I   +    MRALG   T  
Sbjct: 1  EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNA 36

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.5 bits (117), Expect = 1e-09
 Identities = 19/46 (41%), Positives = 28/46 (60%)

Query: 32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
            L++++  E KEAF LFD D +G+I + EL   MR+LG   +E  
Sbjct: 2  SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAE 47

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.4 bits (83), Expect = 1e-04
 Identities = 16/47 (34%), Positives = 27/47 (57%)

Query: 31  HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
               S   +QE+ EAF++FD +G G I A EL   + ++G ++T+  
Sbjct: 74  RQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

 Score = 47.3 bits (112), Expect = 2e-09
 Identities = 23/44 (52%), Positives = 28/44 (63%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE  
Sbjct: 2  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE 45

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 47.7 bits (113), Expect = 2e-09
 Identities = 21/46 (45%), Positives = 26/46 (56%)

Query: 32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
            LS++   E K AF++FD DG G I  KEL   MR LG   T+E 
Sbjct: 6  AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEE 51

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 47.3 bits (112), Expect = 2e-09
 Identities = 17/44 (38%), Positives = 27/44 (61%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          LS+++   +KE F++ DTD SGTI   EL   ++ +G E+ E  
Sbjct: 17 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESE 60

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 49.2 bits (116), Expect = 4e-09
 Identities = 10/55 (18%), Positives = 22/55 (40%)

Query: 22  SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           S  +++R     LS++    +++ F      GSG    ++L   +      + E 
Sbjct: 104 SGYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEG 158

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 47.7 bits (112), Expect = 4e-09
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
                K+AF LFD  G+G I    +   +RA G   T   
Sbjct: 2  TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE 42

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 47.7 bits (112), Expect = 4e-09
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVC 83
          L Q++ QE+KEAF + D D  G +  +++      LG    ++    ++ 
Sbjct: 1  LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK 50

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 47.3 bits (111), Expect = 1e-08
 Identities = 17/44 (38%), Positives = 27/44 (61%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          LS+++   +KE F++ DTD SGTI   EL   ++ +G E+ E  
Sbjct: 4  LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESE 47

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 44.9 bits (106), Expect = 1e-08
 Identities = 19/39 (48%), Positives = 25/39 (64%)

Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          ++EI +AF LFD D SGTI  K+L    + LG  +TEE 
Sbjct: 8  REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEE 46

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 44.2 bits (104), Expect = 3e-08
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 34 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEHGIVLVCTI 85
          L++++K E K AF++F      G+I  KEL   MR LG   T E    ++  +
Sbjct: 9  LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEV 61

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 45.8 bits (107), Expect = 4e-08
 Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 33 GLSQQKKQEIKEAFE-LFDTDGSGTIDAKELNVAMRALGFEMTEE 76
          GL+  +KQ+IK  F+   D +  G+I   +    M          
Sbjct: 1  GLNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGS 45

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 45.3 bits (106), Expect = 4e-08
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 34 LSQQKKQEIKEAFELFDTDG-SGTIDAKELNVAMRALGFEMTEEH 77
          L++++K E K AF++F      G+I  KEL   MR LG   T E 
Sbjct: 8  LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE 52

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 34.2 bits (77), Expect = 6e-04
 Identities = 13/39 (33%), Positives = 25/39 (64%)

Query: 39  KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
           ++E+ + F +FD +  G ID +EL + ++A G  +TE+ 
Sbjct: 90  EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD 128

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 43.7 bits (103), Expect = 4e-08
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFE-MTEEH 77
          +EI  AF++FD +G G ID  E    M+ +G E +T+  
Sbjct: 2  EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAE 40

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

 Score = 45.4 bits (106), Expect = 5e-08
 Identities = 9/43 (20%), Positives = 13/43 (30%)

Query: 35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          S    Q++K  F   D D  G I   +          E   + 
Sbjct: 1  SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKA 43

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

 Score = 45.4 bits (106), Expect = 6e-08
 Identities = 8/49 (16%), Positives = 17/49 (34%), Gaps = 5/49 (10%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKEL-----NVAMRALGFEMTEEH 77
           + +  +  K  F+  D +G+G I   E+     +     L     +  
Sbjct: 8  DNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTK 56

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 45.0 bits (105), Expect = 7e-08
 Identities = 9/53 (16%), Positives = 23/53 (43%)

Query: 35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIVE 87
          +      +K+ F+ +D DG+G ++  +     + +     ++ G   V T+  
Sbjct: 2  TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKN 54

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 35.4 bits (80), Expect = 3e-04
 Identities = 14/64 (21%), Positives = 19/64 (29%)

Query: 12  FKRASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF 71
                                      K E  EAF   DT+G+G +   EL  A+R   F
Sbjct: 108 VGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRDFHF 167

Query: 72  EMTE 75
              +
Sbjct: 168 GRLD 171

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 43.4 bits (102), Expect = 7e-08
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          + Q   + +  F+ FDT+G G I + EL  A++ LG    +E 
Sbjct: 1  TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEV 43

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 8e-08
 Identities = 29/42 (69%), Positives = 36/42 (85%)

Query: 36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          +++KQEI+EAF+LFD DG+GTID KEL VAMRALGFE  +E 
Sbjct: 2  EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEE 43

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (79), Expect = 3e-04
 Identities = 17/48 (35%), Positives = 25/48 (52%)

Query: 30  RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
                 +  K+EI +AF+LFD D +G I  K L    + LG  +T+E 
Sbjct: 69  TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE 116

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 8e-08
 Identities = 14/51 (27%), Positives = 19/51 (37%)

Query: 27 IRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          I  R H         I + FE FDT  + TI  +E           +T+E 
Sbjct: 7  ILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQ 57

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 43.0 bits (101), Expect = 9e-08
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          ++E+   F +FD +  G ID +EL   +RA G  + EE 
Sbjct: 8  EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 46

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 44.5 bits (104), Expect = 1e-07
 Identities = 21/46 (45%), Positives = 26/46 (56%)

Query: 32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
            LS++   E K AF++FD DG G I  KEL   MR LG   T+E 
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEE 57

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 38.0 bits (87), Expect = 3e-05
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 31  HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
                 + ++E+   F +FD +  G ID +EL   +RA G  +TEE 
Sbjct: 87  KEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 43.7 bits (102), Expect = 2e-07
 Identities = 23/44 (52%), Positives = 28/44 (63%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          L++++  E KEAF LFD DG GTI  KEL   MR+LG   TE  
Sbjct: 3  LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAE 46

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 32.9 bits (74), Expect = 0.002
 Identities = 18/48 (37%), Positives = 28/48 (58%)

Query: 30  RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
                 Q  ++E+ EAF++FD DG+G I A EL   M  LG ++T++ 
Sbjct: 72  ARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 119

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (100), Expect = 3e-07
 Identities = 11/46 (23%), Positives = 17/46 (36%)

Query: 29 GRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 74
          G   G +   +  +   F+  D D SG I   EL  A+    +   
Sbjct: 8  GPAAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPF 53

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.1 bits (96), Expect = 4e-07
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 37 QKKQEIKEAFELFDTD--GSGTIDAKELNVAMRALGFEMTEEHGIV 80
          +  +EIK AFE+F         I  +EL + M+ LG  + +    +
Sbjct: 2  KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTL 47

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.1 bits (98), Expect = 8e-07
 Identities = 7/39 (17%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 39 KQEIKEAFELFDTDG-SGTIDAKELNVAMRALGFEMTEE 76
            +++E ++ F  +  SGT+   E     +    E   +
Sbjct: 20 AAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQ 58

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.3 bits (94), Expect = 9e-07
 Identities = 10/37 (27%), Positives = 13/37 (35%)

Query: 41 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
            K  FE FD +  G +   E      A     T+E 
Sbjct: 2  SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQED 38

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

 Score = 41.9 bits (97), Expect = 1e-06
 Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 5/48 (10%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKEL-----NVAMRALGFEMTEE 76
           + +     K  F   D + +G I   E+     ++ +  LG    + 
Sbjct: 6  DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQA 53

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 40.7 bits (95), Expect = 1e-06
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF 71
          GL+ +   ++K+AF + D D SG I+  EL + ++    
Sbjct: 33 GLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSP 71

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.6 bits (92), Expect = 1e-06
 Identities = 9/37 (24%), Positives = 21/37 (56%)

Query: 41 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          +  +AF++FD + +G +   +L   +  LG ++T+  
Sbjct: 2  DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAE 38

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.2 bits (91), Expect = 2e-06
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          +EI+EAF +FD DG+G I A EL   M  LG ++T+
Sbjct: 3  EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 38

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 39.1 bits (91), Expect = 4e-06
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF 71
          GL      ++K+ F+  D D SG I+ +EL   +++   
Sbjct: 34 GLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAA 72

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.2 bits (91), Expect = 5e-06
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          GLS+    ++K+ F   D D SG +D  EL   ++    +  E
Sbjct: 34 GLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARE 76

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 5e-06
 Identities = 8/43 (18%), Positives = 15/43 (34%)

Query: 36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHG 78
             +   K  F L D +  G +D +EL         ++ +   
Sbjct: 12 DPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKN 54

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

 Score = 38.9 bits (89), Expect = 8e-06
 Identities = 6/32 (18%), Positives = 13/32 (40%)

Query: 46 FELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          F+  D +G G +  +E+   +        E+ 
Sbjct: 6  FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQL 37

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 38.4 bits (89), Expect = 9e-06
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF 71
          GL  +   ++KE FE+ D D SG I+ +EL   ++    
Sbjct: 34 GLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSA 72

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.1 bits (88), Expect = 1e-05
 Identities = 11/57 (19%), Positives = 15/57 (26%)

Query: 11 LFKRASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMR 67
           FK                     S+    E+   +EL D D  G +   E   A  
Sbjct: 14 QFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFH 70

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 1e-05
 Identities = 9/44 (20%), Positives = 13/44 (29%), Gaps = 1/44 (2%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
             Q +  +   F        G IDA EL   +   G     + 
Sbjct: 1  FPGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKP 43

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 37.6 bits (87), Expect = 2e-05
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          GL ++   ++K+ F + D D SG I+  EL   ++    +  +
Sbjct: 34 GLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARD 76

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 37.2 bits (86), Expect = 2e-05
 Identities = 13/39 (33%), Positives = 25/39 (64%)

Query: 39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH 77
          ++E+ + F +FD +  G ID +EL + ++A G  +TE+ 
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD 52

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 37.0 bits (85), Expect = 7e-05
 Identities = 13/51 (25%), Positives = 25/51 (49%)

Query: 26  KIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 76
           K+      +   + +     F  FD D SG++ A E+ +A+ A GF++  +
Sbjct: 79  KLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQ 129

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 32.8 bits (74), Expect = 0.003
 Identities = 7/40 (17%), Positives = 13/40 (32%), Gaps = 1/40 (2%)

Query: 36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          ++     K  F     D    I  KEL   +  +  +  +
Sbjct: 16 EEIDDNFKTLFSKLAGDD-MEISVKELQTILNRIISKHKD 54

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 1e-04
 Identities = 6/57 (10%), Positives = 14/57 (24%)

Query: 11 LFKRASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMR 67
          +F +                    +      +   + L DT   G +   +  +A  
Sbjct: 15 IFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (72), Expect = 0.002
 Identities = 10/42 (23%), Positives = 15/42 (35%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          +S  +K +  E F   D D  G +   E+       G   T 
Sbjct: 4  VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTL 45

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (82), Expect = 1e-04
 Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT 84
              + + + + F+  D D SG++  +E  +++  L      +  I +  T
Sbjct: 10 FDADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPLVQRVIDIFDT 59

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 36.0 bits (82), Expect = 1e-04
 Identities = 5/42 (11%), Positives = 14/42 (33%), Gaps = 1/42 (2%)

Query: 37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHG 78
          ++ ++ +  F     D    + A EL   +  +     +   
Sbjct: 1  EEVRQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKT 41

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 34.0 bits (78), Expect = 2e-04
 Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 2/48 (4%)

Query: 35 SQQKKQEIKEAFELFDT--DGSGTIDAKELNVAMRALGFEMTEEHGIV 80
          +Q+   E+K  FE +         +  +EL   ++A    + +    +
Sbjct: 2  AQKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTL 49

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 3e-04
 Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 2/34 (5%)

Query: 46 FELFD--TDGSGTIDAKELNVAMRALGFEMTEEH 77
          +  F       G +DA+EL   +   G   T   
Sbjct: 3  YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSP 36

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

 Score = 34.4 bits (78), Expect = 6e-04
 Identities = 6/40 (15%), Positives = 12/40 (30%), Gaps = 1/40 (2%)

Query: 36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 75
          +      +  F          I A EL   +R +  +  +
Sbjct: 14 EDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKRED 52

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 33.0 bits (74), Expect = 0.002
 Identities = 8/49 (16%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 30 RHHGLSQQKKQEIKEAFELFDTD--GSGTIDAKELNVAMRALGFEMTEE 76
          R    S  + + + E F+   +     G I+ +E  +A+     + +  
Sbjct: 7  RDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF 55

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 34

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 30.6 bits (69), Expect = 0.003
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG 70
          + ++E+  AF +FD +  G ID +EL   +RA G
Sbjct: 1  KSEEELANAFRIFDKNADGYIDIEELGEILRATG 34

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	87
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.56
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.53
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.49
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.47
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.42
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	99.38
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.37
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.37
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.36
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.36
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.32
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.29
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.25
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.21
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.2
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.14
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.13
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	99.07
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.06
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.05
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.05
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.03
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.03
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	99.02
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.02
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.02
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.01
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.01
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	99.0
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	98.95
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	98.95
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.95
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	98.95
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	98.94
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	98.94
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	98.93
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	98.91
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	98.88
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	98.87
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	98.84
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	98.84
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	98.83
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	98.83
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	98.83
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	98.83
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	98.82
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	98.8
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.78
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.75
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	98.74
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	98.73
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.73
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	98.69
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	98.69
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	98.66
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	98.65
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	98.62
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	98.62
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	98.6
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	98.57
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.56
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	98.54
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	98.53
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	98.53
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	98.5
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	98.47
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	98.46
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	98.44
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	98.44
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	98.41
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	98.38
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	98.37
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	98.34
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	98.33
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.32
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	98.31
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.25
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	98.23
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	98.23
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	98.23
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	98.21
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	98.2
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	98.14
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	98.11
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	98.08
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	98.04
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.02
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	97.97
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	97.95
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	97.95
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	97.95
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	97.94
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	97.88
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	97.86
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	97.86
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	97.82
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	97.8
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	97.8
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	97.79
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	97.64
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	97.62
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	97.55
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	97.5
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	97.43
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	97.41
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	97.29
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	97.29
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	97.27
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	97.26
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	97.25
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	97.21
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	97.21
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	97.2
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.13
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	97.12
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	97.11
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	97.1
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	97.1
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	97.06
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	97.06
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	97.04
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	97.03
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	97.01
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	96.94
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	96.93
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	96.93
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	96.93
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	96.9
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	96.86
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	96.81
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	96.77
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	96.76
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	96.72
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	96.7
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	96.65
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	96.54
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	96.53
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	96.52
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	96.5
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	96.5
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	96.47
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	96.46
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	96.44
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	96.4
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	96.3
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	96.26
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	96.16
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	96.15
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	96.03
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	96.02
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	96.01
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	95.68
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	95.39
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	95.28
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	94.98
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	94.7
d1b72a_	88	Homeobox protein hox-b1 {Human (Homo sapiens) [Tax	94.11
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	93.72
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	93.33
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	92.88
d1wi3a_	71	DNA-binding protein SATB2 {Human (Homo sapiens) [T	91.47
d1h8ba_	73	alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}	90.66
d2e1oa1	57	Homeobox protein prh {Human (Homo sapiens) [TaxId:	90.1
d1pufa_	77	Homeobox protein hox-a9 {Mouse (Mus musculus) [Tax	89.88
d2craa1	58	Homeobox protein hox-b13 {Human (Homo sapiens) [Ta	89.86
d1p7ia_	53	Engrailed Homeodomain {Drosophila melanogaster [Ta	89.5
d1s7ea1	50	Hepatocyte nuclear factor 6 {Mouse (Mus musculus)	89.46
d1vnda_	77	VND/NK-2 protein {Fruit fly (Drosophila melanogast	89.41
d1wh7a_	80	ZF-HD homeobox protein At4g24660 {Thale cress (Ara	89.08
d1jgga_	57	Even-skipped homeodomain {Fruit fly (Drosophila me	89.07
d1fjla_	65	Paired protein {Fruit fly (Drosophila melanogaster	88.04
d1ig7a_	58	Msx-1 homeodomain {Mouse (Mus musculus) [TaxId: 10	87.92
d1le8a_	53	Mating type protein A1 Homeodomain {Baker's yeast	87.59
d1eg3a2	97	Dystrophin {Human (Homo sapiens) [TaxId: 9606]}	86.02
d1au7a1	58	Pit-1 POU homeodomain {Rat (Rattus norvegicus) [Ta	85.73
d1zq3p1	67	Homeotic bicoid protein {Fruit fly (Drosophila mel	85.52
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	84.21
d2ecca1	76	Homeobox-leucine zipper protein Homez {Human (Homo	83.93
d1uhsa_	72	Homeodomain-only protein, Hop {Mouse (Mus musculus	83.73
d1yz8p1	60	Pituitary homeobox 2 {Human (Homo sapiens) [TaxId:	82.58
d9anta_	56	Antennapedia Homeodomain {Drosophila melanogaster	82.5
d2ecba1	76	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	82.18
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	80.78

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.56  E-value=5.6e-15  Score=79.68  Aligned_cols=55  Identities=38%  Similarity=0.570  Sum_probs=52.6

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..|+++++.+++++|..||.|++|+|+..||+.+|+.+|.+++..++..++..++
T Consensus         2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D   56 (77)
T d1f54a_           2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEID   56 (77)
T ss_dssp             CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTC
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            6899999999999999999999999999999999999999999999999998764

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.53  E-value=2.1e-14  Score=78.23  Aligned_cols=55  Identities=38%  Similarity=0.528  Sum_probs=52.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..|+++++++++.+|..||.|++|+|+..||+.+|+.+|.+++..+++.++..++
T Consensus         6 ~~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D   60 (81)
T d1avsa_           6 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVD   60 (81)
T ss_dssp             HHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             ccCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            4589999999999999999999999999999999999999999999999999875

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.49  E-value=3.5e-14  Score=75.86  Aligned_cols=54  Identities=43%  Similarity=0.610  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .|+++++.+++.+|..||.+++|+|+..||+.+|+.+|..++.+++..+++.++
T Consensus         1 qLs~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D   54 (73)
T d2pq3a1           1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD   54 (73)
T ss_dssp             CCCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             CcCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            478999999999999999999999999999999999999999999999998875

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.47  E-value=1e-13  Score=75.73  Aligned_cols=55  Identities=33%  Similarity=0.477  Sum_probs=51.6

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCC-CCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDG-SGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~-~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++++.+++.+|+.||.++ +|+|+..||+.+|+.+|.+++..+++.+|.+++
T Consensus         7 ~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D   62 (82)
T d1wrka1           7 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD   62 (82)
T ss_dssp             HHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTC
T ss_pred             hhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            4689999999999999999995 799999999999999999999999999999875

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.42  E-value=2.6e-13  Score=73.77  Aligned_cols=51  Identities=29%  Similarity=0.488  Sum_probs=48.0

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      |++++++++++|+.||.|++|+|+..||+.+|+.+| .++..++..+|..++
T Consensus         1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D   51 (81)
T d2opoa1           1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEID   51 (81)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhC
Confidence            578999999999999999999999999999999999 689999999999875

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.38  E-value=1.2e-13  Score=63.17  Aligned_cols=32  Identities=53%  Similarity=0.875  Sum_probs=29.8

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      .++++++|+.||+|++|+|+..||+.+|+.+|
T Consensus         2 eeel~eAF~~FDkDg~G~Is~~EL~~vm~~lG   33 (33)
T d2hf5a1           2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG   33 (33)
T ss_dssp             HHHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence            45899999999999999999999999998876

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.37  E-value=7.8e-13  Score=70.88  Aligned_cols=48  Identities=31%  Similarity=0.436  Sum_probs=45.3

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++|+.+|+.||.+++|+|+..||+.+|+.+|..++.++++.+|+.++
T Consensus         8 eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D   55 (75)
T d1jc2a_           8 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSD   55 (75)
T ss_dssp             HHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhC
Confidence            457999999999999999999999999999999999999999999875

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.37  E-value=9.1e-14  Score=76.60  Aligned_cols=57  Identities=32%  Similarity=0.389  Sum_probs=52.9

Q ss_pred             cCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           30 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        30 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+..++++++..|+.+|..||.+++|+|+..||+.+|+.+|..++..+++.+|+.++
T Consensus        13 ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D   69 (87)
T d1s6ja_          13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAAD   69 (87)
T ss_dssp             SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHC
T ss_pred             HHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcC
Confidence            336788888889999999999999999999999999999999999999999999875

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.36  E-value=5.5e-13  Score=68.85  Aligned_cols=47  Identities=21%  Similarity=0.442  Sum_probs=44.1

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++|+++|+.||++++|+|+..||+.+|+.+|..++..++..|++.++
T Consensus         1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D   47 (61)
T d2fcea1           1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVE   47 (61)
T ss_dssp             HHHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCC
T ss_pred             ChHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcC
Confidence            57999999999999999999999999999999999999999998653

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.36  E-value=8e-13  Score=68.98  Aligned_cols=47  Identities=40%  Similarity=0.589  Sum_probs=44.5

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++|+.+|+.||.+++|+|+.+||+.+|+.+|.+++..++..+++.++
T Consensus         3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D   49 (65)
T d1fw4a_           3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD   49 (65)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcC
Confidence            57999999999999999999999999999999999999999998764

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.32  E-value=2.7e-12  Score=68.82  Aligned_cols=50  Identities=38%  Similarity=0.550  Sum_probs=46.8

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +..++++++|+.||.|++|+|+.+||+.+|+.+|.+++..++..+++.++
T Consensus         6 d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D   55 (77)
T d1oqpa_           6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEAD   55 (77)
T ss_dssp             SHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence            45678999999999999999999999999999999999999999999875

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.29  E-value=3.9e-12  Score=68.96  Aligned_cols=48  Identities=29%  Similarity=0.461  Sum_probs=45.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++|+.+|+.||.+++|+|+..||+.+|+.+|.+++..+++.+|..++
T Consensus        14 ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D   61 (81)
T d1fi5a_          14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGD   61 (81)
T ss_dssp             HHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHC
Confidence            457999999999999999999999999999999999999999998875

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.25  E-value=9.4e-12  Score=65.10  Aligned_cols=45  Identities=24%  Similarity=0.301  Sum_probs=43.2

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++++|+.||.|++|+|+..||+.+|+.+|..++.++++.+++.++
T Consensus         3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D   47 (67)
T d1tiza_           3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEID   47 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhC
Confidence            689999999999999999999999999999999999999999875

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.21  E-value=2.6e-11  Score=71.15  Aligned_cols=51  Identities=25%  Similarity=0.427  Sum_probs=48.2

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      |+++++++++++|..||.+++|.|+.++|..+|+.+|.+++..++..++.+
T Consensus         1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~~   51 (142)
T d1wdcb_           1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE   51 (142)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHHh
Confidence            688999999999999999999999999999999999999999999988754

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.20  E-value=6e-12  Score=66.18  Aligned_cols=47  Identities=32%  Similarity=0.487  Sum_probs=43.9

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC-CCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFE-MTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~-~~~~ei~~li~~~~   86 (87)
                      ++++++|+.||.+++|+|+..||+.+|+.+|.. ++.++++.+|..++
T Consensus         2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D   49 (68)
T d1c7va_           2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEAD   49 (68)
T ss_dssp             HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhC
Confidence            569999999999999999999999999999985 89999999999875

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.14  E-value=1.1e-10  Score=68.47  Aligned_cols=54  Identities=39%  Similarity=0.598  Sum_probs=50.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      .+|+++++.+++.+|+.||.|++|+|+.+||+.+|...|..++..++..++...
T Consensus         2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~   55 (146)
T d1lkja_           2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEI   55 (146)
T ss_dssp             CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHh
Confidence            679999999999999999999999999999999999999999999888877654

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.13  E-value=4.8e-11  Score=67.95  Aligned_cols=49  Identities=27%  Similarity=0.494  Sum_probs=44.4

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh---CCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l---g~~~~~~ei~~li~~~~   86 (87)
                      ..++++.+|+.||.|++|+|+.+||+.+|+.+   |..++.++++.+|+.++
T Consensus        39 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e~~~~~~~~D   90 (109)
T d5pala_          39 TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGD   90 (109)
T ss_dssp             CHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHC
T ss_pred             CHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHHHHHHHHHhC
Confidence            35679999999999999999999999999876   77899999999999875

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=1.4e-10  Score=62.63  Aligned_cols=49  Identities=24%  Similarity=0.192  Sum_probs=45.1

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ....++++|..||.+++|+|+.+||+.+|..+|..+++++++.++..++
T Consensus        18 ~~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d   66 (83)
T d1wlza1          18 HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP   66 (83)
T ss_dssp             THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccc
Confidence            4567999999999999999999999999999999999999999987653

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.06  E-value=1.5e-10  Score=67.76  Aligned_cols=48  Identities=13%  Similarity=0.287  Sum_probs=44.8

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.+++|+|+.++|+.+|..+|.+++.++++.+++.++
T Consensus        75 ~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d  122 (142)
T d1wdcb_          75 EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP  122 (142)
T ss_dssp             HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCC
T ss_pred             hhhHHHhhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhC
Confidence            467999999999999999999999999999999999999999998763

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.05  E-value=3.2e-10  Score=66.92  Aligned_cols=55  Identities=33%  Similarity=0.477  Sum_probs=50.8

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCC-CCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDG-SGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~-~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..|+++++++++++|..||.++ +|.|+..||+.+|+.+|..++..++..++..+.
T Consensus         6 ~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~   61 (156)
T d1dtla_           6 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD   61 (156)
T ss_dssp             GGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             HHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhh
Confidence            5789999999999999999995 899999999999999999999999999987653

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.05  E-value=4.1e-10  Score=65.66  Aligned_cols=53  Identities=43%  Similarity=0.639  Sum_probs=50.2

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      .|+++++.+|+++|..+|.+++|+|+.++|..+|..+|..++...+..++..+
T Consensus         2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~   54 (146)
T d1exra_           2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV   54 (146)
T ss_dssp             CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhc
Confidence            58999999999999999999999999999999999999999999999988765

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.03  E-value=1.3e-10  Score=66.13  Aligned_cols=49  Identities=22%  Similarity=0.478  Sum_probs=44.1

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh---CCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l---g~~~~~~ei~~li~~~~   86 (87)
                      ..+.++.+|+.||.|++|+|+.+||+.+|+.+   |..++.++++.+|+.++
T Consensus        39 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~~~~~D   90 (109)
T d1pvaa_          39 SANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAAD   90 (109)
T ss_dssp             CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHC
T ss_pred             CHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHC
Confidence            34678999999999999999999999999887   67899999999998875

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.03  E-value=1.1e-10  Score=69.08  Aligned_cols=49  Identities=35%  Similarity=0.527  Sum_probs=45.1

Q ss_pred             CCHHHHHHHHHHhhhhCC--CCCCcccHHHHHHHHHHhCCCCCHHHHHHHH
Q 048414           34 LSQQKKQEIKEAFELFDT--DGSGTIDAKELNVAMRALGFEMTEEHGIVLV   82 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~--d~~G~I~~~el~~~l~~lg~~~~~~ei~~li   82 (87)
                      |+++++++++++|..||.  +++|+|+.+||+.+|+.+|++++..++..++
T Consensus         1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~   51 (152)
T d1wdcc_           1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVG   51 (152)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhh
Confidence            688999999999999994  8899999999999999999999999987764

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.02  E-value=2.3e-10  Score=66.88  Aligned_cols=48  Identities=27%  Similarity=0.456  Sum_probs=45.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+.++++|+.||.+++|+|+.++|+.+|..+|.+++.++++.+++.++
T Consensus        75 ~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d  122 (140)
T d1ggwa_          75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVP  122 (140)
T ss_dssp             HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhC
Confidence            567999999999999999999999999999999999999999998764

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.02  E-value=2.6e-10  Score=67.67  Aligned_cols=55  Identities=38%  Similarity=0.528  Sum_probs=51.4

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++.+++.+|+++|..||++++|+|+.+||+.+|..++..++...+..++..+.
T Consensus        12 ~~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d   66 (162)
T d1topa_          12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVD   66 (162)
T ss_dssp             HHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheec
Confidence            4589999999999999999999999999999999999999999999999988763

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.02  E-value=3.5e-10  Score=66.81  Aligned_cols=49  Identities=29%  Similarity=0.399  Sum_probs=45.4

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++++.+|+.||.+++|+|+..+|+.+|..+|.+++.++++.+++.+.
T Consensus        80 ~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d  128 (152)
T d1wdcc_          80 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTD  128 (152)
T ss_dssp             CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHT
T ss_pred             HHHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Confidence            3467999999999999999999999999999999999999999998764

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.01  E-value=2e-10  Score=67.14  Aligned_cols=47  Identities=32%  Similarity=0.396  Sum_probs=43.7

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      .++++++|..||.+++|+|+.+||..+|+.+|.+++..++..++..+
T Consensus         3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~   49 (145)
T d2mysc_           3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNP   49 (145)
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHH
Confidence            56799999999999999999999999999999999999999888764

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.01  E-value=2.9e-10  Score=50.42  Aligned_cols=33  Identities=39%  Similarity=0.725  Sum_probs=29.7

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      .+++|.++|++||+|.+|+|+.+||..+|+.-|
T Consensus         2 sEeELae~FRifDkNaDGyiD~eEl~~ilr~tG   34 (34)
T d1ctda_           2 SEEELANAFRIFDKNADGYIDIEELGEILRATG   34 (34)
T ss_dssp             HHHHHHHHHHTTCCSSSSCBCHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHccCCcccccHHHHHHHHHhcC
Confidence            357899999999999999999999999998754

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=6.4e-10  Score=67.12  Aligned_cols=49  Identities=29%  Similarity=0.445  Sum_probs=45.4

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+..|+.+|+.||+|++|+|+.+||+.+|..+|.+++..+++.++..++
T Consensus        68 ~~~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d  116 (165)
T d1k94a_          68 ALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYS  116 (165)
T ss_dssp             HHHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             ccchhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcC
Confidence            4677899999999999999999999999999999999999999998653

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=98.95  E-value=1.4e-10  Score=70.53  Aligned_cols=55  Identities=33%  Similarity=0.418  Sum_probs=50.9

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..|+++++.+|+++|+.||.+++|+|+.+||+.+|..+|..++..+++.++..++
T Consensus         2 ~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d   56 (182)
T d1s6ia_           2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAAD   56 (182)
T ss_dssp             CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhh
Confidence            5688889999999999999999999999999999999999999999999987653

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=8e-10  Score=63.87  Aligned_cols=52  Identities=58%  Similarity=0.877  Sum_probs=48.1

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      |+++.++|+++|..||.+++|+|+..||..+|+.+|..++...+..++..++
T Consensus         1 t~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d   52 (141)
T d2obha1           1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEID   52 (141)
T ss_dssp             CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhc
Confidence            5778899999999999999999999999999999999999999998887653

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=9.7e-10  Score=60.87  Aligned_cols=52  Identities=17%  Similarity=0.113  Sum_probs=47.2

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+++++...++.+|+.+|+|++|+|+.+|++.+|...|  ++..++..+++.++
T Consensus         3 ~lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~--l~~~~l~~i~~~~D   54 (95)
T d1c07a_           3 VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCD   54 (95)
T ss_dssp             SSCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHC
T ss_pred             cCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcC--CCHHHHHHHHHHhC
Confidence            37888999999999999999999999999999998876  68899999998875

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=98.95  E-value=3e-10  Score=64.30  Aligned_cols=52  Identities=21%  Similarity=0.365  Sum_probs=45.7

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC---CCCCHHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG---FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg---~~~~~~ei~~li~~~~   86 (87)
                      +....++++.+|+.||.+++|+|+..||+.+|+.++   ..++.++++.+|+.++
T Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~~~~D   89 (107)
T d2pvba_          35 ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGD   89 (107)
T ss_dssp             GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHC
T ss_pred             ccCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHHHHHhC
Confidence            344567899999999999999999999999999984   4689999999999875

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.94  E-value=2.2e-10  Score=64.93  Aligned_cols=52  Identities=27%  Similarity=0.409  Sum_probs=45.3

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh---CCCCCHHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l---g~~~~~~ei~~li~~~~   86 (87)
                      +....+.++.+|+.||.|++|+|+.+||+.+|+.+   |..++.++++.+|+.++
T Consensus        36 ~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D   90 (108)
T d1rroa_          36 SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAAD   90 (108)
T ss_dssp             GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHC
T ss_pred             CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhC
Confidence            34456779999999999999999999999999887   45689999999998875

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.94  E-value=1.6e-09  Score=59.57  Aligned_cols=52  Identities=10%  Similarity=0.007  Sum_probs=47.8

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+++++...++.+|+.+|.|++|+|+.++++.+|...|  ++..++..+++.++
T Consensus         2 ~ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~--l~~~~l~~i~~~~D   53 (92)
T d1fi6a_           2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSD   53 (92)
T ss_dssp             CCCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHcc--CCHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999986  68889999998875

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.93  E-value=1.3e-09  Score=63.59  Aligned_cols=48  Identities=31%  Similarity=0.534  Sum_probs=45.0

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.+++|+|+.+||+.+|..+|..++.++++.+++.+.
T Consensus        82 ~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d  129 (146)
T d1lkja_          82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS  129 (146)
T ss_dssp             HHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc
Confidence            467999999999999999999999999999999999999999998763

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=98.91  E-value=9.2e-10  Score=62.32  Aligned_cols=50  Identities=20%  Similarity=0.420  Sum_probs=44.2

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC---CCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG---FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg---~~~~~~ei~~li~~~~   86 (87)
                      ...+.++.+|+.||.|++|+|+.+||+.+|+.++   ..++..+++.+|+.++
T Consensus        38 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D   90 (109)
T d1rwya_          38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGD   90 (109)
T ss_dssp             SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHC
T ss_pred             CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhC
Confidence            3466799999999999999999999999999875   4689999999999875

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.88  E-value=2.6e-09  Score=62.47  Aligned_cols=49  Identities=24%  Similarity=0.434  Sum_probs=41.5

Q ss_pred             CCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCH-HHHHHHH
Q 048414           34 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE-EHGIVLV   82 (87)
Q Consensus        34 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~-~ei~~li   82 (87)
                      ++++++.+++++|..||.+++|+|+.++|+.+|+.+|...+. +.+..++
T Consensus         1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~~~~~~   50 (145)
T d2mysb_           1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMI   50 (145)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHHHHHHHH
Confidence            578899999999999999999999999999999999976544 4444443

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.87  E-value=1.9e-09  Score=62.89  Aligned_cols=48  Identities=31%  Similarity=0.445  Sum_probs=44.2

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      .....++.+|+.||.+++|+|+.+||+.+|..+|.+++.++++.+++.
T Consensus        78 ~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~  125 (145)
T d2mysc_          78 GTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG  125 (145)
T ss_pred             chHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhh
Confidence            345679999999999999999999999999999999999999999874

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=6.2e-10  Score=64.44  Aligned_cols=44  Identities=41%  Similarity=0.517  Sum_probs=40.6

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      +++++|..||.+++|+|+.+||+.+|+.+|..++..++..++..
T Consensus         1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~   44 (139)
T d1w7jb1           1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGN   44 (139)
T ss_dssp             CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTC
T ss_pred             CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHH
Confidence            47999999999999999999999999999999999999888643

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.84  E-value=1.5e-09  Score=63.44  Aligned_cols=47  Identities=21%  Similarity=0.442  Sum_probs=43.6

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      +.++.+|+.||.+++|+|+.+||+.+|..+|.+++.+++..+|..++
T Consensus        81 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D  127 (146)
T d1m45a_          81 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVE  127 (146)
T ss_dssp             HHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCC
T ss_pred             HHHHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhC
Confidence            56899999999999999999999999999999999999999987653

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.83  E-value=2.8e-09  Score=62.32  Aligned_cols=49  Identities=24%  Similarity=0.288  Sum_probs=45.3

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..+.++.+|+.||.+++|+|+..+|+.+|+.+|.+++.++++.+++.++
T Consensus        75 ~~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d  123 (145)
T d2mysb_          75 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFP  123 (145)
T ss_pred             hHHHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence            3467999999999999999999999999999999999999999998764

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.83  E-value=2e-09  Score=62.79  Aligned_cols=44  Identities=30%  Similarity=0.389  Sum_probs=40.7

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVC   83 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~   83 (87)
                      ..++++|..||.+++|+|+.+||+.+|+.+|.+++..++..+..
T Consensus         5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~~~~   48 (140)
T d1ggwa_           5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES   48 (140)
T ss_dssp             TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhhhhc
Confidence            46899999999999999999999999999999999999887754

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.83  E-value=1.7e-09  Score=57.47  Aligned_cols=48  Identities=27%  Similarity=0.389  Sum_probs=40.4

Q ss_pred             HHHHHHHhhhhCCC--CCCcccHHHHHHHHHHhCCCCC--HHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTD--GSGTIDAKELNVAMRALGFEMT--EEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d--~~G~I~~~el~~~l~~lg~~~~--~~ei~~li~~~~   86 (87)
                      .++|+.+|+.||.+  ++|+|+.+||+.+|+.+|.+++  ..+|+.+|+.++
T Consensus         4 ~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D   55 (76)
T d1qx2a_           4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVD   55 (76)
T ss_dssp             HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHC
T ss_pred             HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhh
Confidence            56799999999654  5799999999999999987765  447999998875

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=98.83  E-value=2.2e-09  Score=65.10  Aligned_cols=47  Identities=36%  Similarity=0.450  Sum_probs=44.0

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ++|+++|..+|.|++|+|+.+||..+|+.+|..++..+++.++..+.
T Consensus        18 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d   64 (182)
T d1y1xa_          18 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYD   64 (182)
T ss_dssp             SCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhcccc
Confidence            46999999999999999999999999999999999999999998764

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.82  E-value=4.8e-10  Score=65.64  Aligned_cols=44  Identities=30%  Similarity=0.468  Sum_probs=40.5

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ++++|..||.+++|+|+.+||..+|+++|..++.+++..++...
T Consensus         4 ~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~   47 (146)
T d1m45a_           4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINAD   47 (146)
T ss_dssp             CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC-
T ss_pred             HHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccc
Confidence            67899999999999999999999999999999999999988643

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=98.80  E-value=1.1e-08  Score=59.33  Aligned_cols=49  Identities=35%  Similarity=0.535  Sum_probs=45.6

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..+.++.+|+.||.|++|+|+..||+.+|..+|..++.++++.+++.++
T Consensus        80 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D  128 (146)
T d1exra_          80 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREAD  128 (146)
T ss_dssp             HHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhC
Confidence            4567899999999999999999999999999999999999999998874

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.78  E-value=2.4e-09  Score=63.07  Aligned_cols=50  Identities=28%  Similarity=0.454  Sum_probs=44.1

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...+.++.+|+.||.+++|+|+.+|++.++..+|..++.++++.+|+.++
T Consensus        88 ~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D  137 (156)
T d1dtla_          88 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGD  137 (156)
T ss_dssp             CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhC
Confidence            34567899999999999999999999999999999999999999999875

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=1e-08  Score=56.69  Aligned_cols=51  Identities=6%  Similarity=0.024  Sum_probs=46.1

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++.++...++++|+.+| +++|+|+.++++.+|...|  ++..+++.|+..++
T Consensus         3 ~ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~g--l~~~~L~~Iw~~~D   53 (95)
T d2jxca1           3 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSD   53 (95)
T ss_dssp             SSCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSS--CCHHHHHHHHHHHC
T ss_pred             cCCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcC--CCHHHHHHHHHHhc
Confidence            478999999999999999 8999999999999998776  57889999998875

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=3.4e-09  Score=61.20  Aligned_cols=49  Identities=31%  Similarity=0.491  Sum_probs=41.4

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ....+.++.+|+.||.+++|+|+.+||+.+|..+|..++..+++.+++.
T Consensus        73 ~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~  121 (139)
T d1w7jb1          73 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG  121 (139)
T ss_dssp             -----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTT
T ss_pred             ccHHHHHHHhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHhh
Confidence            3445568999999999999999999999999999999999999988753

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=98.73  E-value=1.6e-08  Score=60.62  Aligned_cols=50  Identities=18%  Similarity=0.140  Sum_probs=45.2

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .....++.+|..||.|++|+|+.+||+.+|..+|..++.+++..+++.++
T Consensus       102 ~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D  151 (187)
T d1uhka1         102 LIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCD  151 (187)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhC
Confidence            34456889999999999999999999999999999999999999998764

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.73  E-value=2.4e-08  Score=58.89  Aligned_cols=49  Identities=33%  Similarity=0.449  Sum_probs=45.1

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..+.++.+|+.||.+++|+|+..||+.+|...|...+.+++..+|+.++
T Consensus        94 ~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D  142 (162)
T d1topa_          94 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD  142 (162)
T ss_dssp             HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhC
Confidence            4456889999999999999999999999999999999999999998875

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=98.69  E-value=2e-08  Score=61.47  Aligned_cols=48  Identities=29%  Similarity=0.479  Sum_probs=42.2

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      .....|+.+|+.||+|++|+|+..||+.+|..+|..++.+.++.++..
T Consensus        90 ~~~~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~  137 (188)
T d1qxpa2          90 NRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR  137 (188)
T ss_dssp             HHHHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence            356789999999999999999999999999999999998777766653

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=4.7e-08  Score=56.14  Aligned_cols=49  Identities=35%  Similarity=0.488  Sum_probs=45.7

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ....++.+|..+|.+++|+|+..+|+.+|..+|..++.+++..+|+.++
T Consensus        77 ~~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D  125 (141)
T d2obha1          77 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEAD  125 (141)
T ss_dssp             HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHC
Confidence            3567899999999999999999999999999999999999999999875

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=98.66  E-value=5.5e-08  Score=53.35  Aligned_cols=51  Identities=12%  Similarity=0.116  Sum_probs=43.0

Q ss_pred             HHHHHHHHHhhhh-CCCCC-CcccHHHHHHHHHHhCC-----CCCHHHHHHHHHHHhC
Q 048414           37 QKKQEIKEAFELF-DTDGS-GTIDAKELNVAMRALGF-----EMTEEHGIVLVCTIVE   87 (87)
Q Consensus        37 ~~~~~l~~~F~~~-D~d~~-G~I~~~el~~~l~~lg~-----~~~~~ei~~li~~~~e   87 (87)
                      ..++.+.++|+.| |.||+ |+|+.+||+.+|+.++.     ..+..+++.+|+.++.
T Consensus         6 ~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~   63 (93)
T d1zfsa1           6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDE   63 (93)
T ss_dssp             HHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcC
Confidence            4568899999998 88875 99999999999998753     4678999999998863

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=98.65  E-value=1.8e-08  Score=64.50  Aligned_cols=55  Identities=16%  Similarity=0.183  Sum_probs=51.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ..++.++...++.+|..+|.|++|.|+.+||+.+|..+|..++..++..++..++
T Consensus       114 ~~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d  168 (321)
T d1ij5a_         114 PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVE  168 (321)
T ss_dssp             CCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHh
Confidence            5688999999999999999999999999999999999999999999999988764

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.62  E-value=4.3e-08  Score=59.19  Aligned_cols=49  Identities=18%  Similarity=0.228  Sum_probs=42.7

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC-CCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE-MTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~-~~~~ei~~li~~~~   86 (87)
                      +.+.|..+|+.||.+++|+|+.+||+.+|+.++.. .+.++++.+++.++
T Consensus        17 ~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D   66 (181)
T d1hqva_          17 DQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFD   66 (181)
T ss_dssp             CHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccc
Confidence            45679999999999999999999999999988754 78888998887653

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=98.62  E-value=2.7e-08  Score=56.56  Aligned_cols=45  Identities=16%  Similarity=0.202  Sum_probs=41.0

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...+|+.||.|++|+|+.+||..+|..+|...+..+++.++..++
T Consensus         2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D   46 (134)
T d1jfja_           2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSID   46 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHC
T ss_pred             HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhh
Confidence            357899999999999999999999999999999999999988764

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=98.60  E-value=3.8e-08  Score=59.14  Aligned_cols=49  Identities=24%  Similarity=0.291  Sum_probs=40.5

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ....+..+|..||.|++|+|+.+|+..++..+|..++.++++.+++.++
T Consensus       105 ~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D  153 (189)
T d1qv0a_         105 IREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCD  153 (189)
T ss_dssp             HHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhC
Confidence            3445778999999999999999999999999999999999999998765

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.57  E-value=5.7e-09  Score=55.81  Aligned_cols=50  Identities=16%  Similarity=0.170  Sum_probs=41.2

Q ss_pred             HHHHHHHHHhhhhCC--CCCCcccHHHHHHHHHHh--CCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDT--DGSGTIDAKELNVAMRAL--GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~--d~~G~I~~~el~~~l~~l--g~~~~~~ei~~li~~~~   86 (87)
                      ...++|+.+|+.||.  ++.|+|+..||+.+|+.+  +...+.++++.+|..++
T Consensus         4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D   57 (78)
T d1cb1a_           4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELD   57 (78)
T ss_dssp             CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTC
T ss_pred             hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHc
Confidence            346789999999974  346899999999999998  55567778999998875

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.4e-08  Score=57.61  Aligned_cols=52  Identities=8%  Similarity=0.012  Sum_probs=45.9

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++.++.+.++.+|..+|++++|+|+.++++.+|...|  ++..++..|++.++
T Consensus        15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~--L~~~~L~~Iw~l~D   66 (110)
T d1iq3a_          15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSD   66 (110)
T ss_dssp             CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHC
T ss_pred             ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhc--cchHHHHHHHHHhc
Confidence            68889999999999999999999999999999998766  56667888888764

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=98.54  E-value=1.4e-07  Score=56.88  Aligned_cols=48  Identities=23%  Similarity=0.427  Sum_probs=44.3

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|..+|.+++|+|+.+||+.+|..+|..++.++++.+++.++
T Consensus        83 ~~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d  130 (182)
T d1y1xa_          83 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFD  130 (182)
T ss_dssp             HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHC
T ss_pred             ccccccchhccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcc
Confidence            456888999999999999999999999999999999999999998764

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=98.53  E-value=7.4e-08  Score=53.45  Aligned_cols=50  Identities=8%  Similarity=0.017  Sum_probs=41.3

Q ss_pred             HHHHHHHHHhhhh-CCCCC-CcccHHHHHHHHHHhCC--CCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELF-DTDGS-GTIDAKELNVAMRALGF--EMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~-D~d~~-G~I~~~el~~~l~~lg~--~~~~~ei~~li~~~~   86 (87)
                      ..++.+..+|+.| |.+++ |+|+..||+.+|+.++.  ..+...++.+|+.++
T Consensus        11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D   64 (98)
T d1yuta1          11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLD   64 (98)
T ss_dssp             HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhc
Confidence            4567999999998 77775 99999999999998753  356677999999876

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=1.4e-07  Score=56.36  Aligned_cols=48  Identities=29%  Similarity=0.455  Sum_probs=43.9

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...+..+|+.||.+++|+|+.+|++.+|..+|..++.++++.+++.++
T Consensus        76 ~~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~~d  123 (172)
T d1juoa_          76 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYS  123 (172)
T ss_dssp             HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTC
T ss_pred             hhhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            456889999999999999999999999999999999999999988653

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=98.50  E-value=3e-07  Score=50.42  Aligned_cols=52  Identities=15%  Similarity=0.233  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHhhhh-CCCCC-CcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHhC
Q 048414           36 QQKKQEIKEAFELF-DTDGS-GTIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIVE   87 (87)
Q Consensus        36 ~~~~~~l~~~F~~~-D~d~~-G~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~e   87 (87)
                      +..++.+..+|+.| |.|++ |+|+.+||+.+|+.     ++...+.++++++|+.++.
T Consensus         5 E~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~   63 (93)
T d3c1va1           5 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS   63 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcC
Confidence            34578899999999 66665 57999999999987     4567899999999998863

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=98.47  E-value=5.7e-08  Score=53.35  Aligned_cols=50  Identities=14%  Similarity=0.137  Sum_probs=41.7

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh-----CCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL-----GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-----g~~~~~~ei~~li~~~~   86 (87)
                      +..++.+..+|+.||.| +|+|+.+||..+|...     +...+...++.+++.++
T Consensus         5 E~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D   59 (92)
T d1a4pa_           5 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLD   59 (92)
T ss_dssp             HHHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHh
Confidence            35678899999999987 7999999999999873     44456778999998876

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.46  E-value=3.1e-07  Score=53.89  Aligned_cols=49  Identities=20%  Similarity=0.303  Sum_probs=42.6

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ......++.+|..||.|++|+|+.+|++.+++.+|  ++..+++.++..++
T Consensus        98 ~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~--~~~~~~~~~f~~~D  146 (176)
T d1nyaa_          98 RVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVD  146 (176)
T ss_dssp             HHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcC--CcHHHHHHHHHHHC
Confidence            34456789999999999999999999999999887  58899999998875

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=98.44  E-value=1.1e-07  Score=57.51  Aligned_cols=44  Identities=27%  Similarity=0.458  Sum_probs=39.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLV   82 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li   82 (87)
                      +..|+.+|+.||+|++|+|+..||+.+|+.+|..++.+.++.++
T Consensus        90 ~~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~~~~~~~  133 (186)
T d1df0a1          90 IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIV  133 (186)
T ss_dssp             HHHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccHHHHHHHH
Confidence            46789999999999999999999999999999999987665544

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=98.44  E-value=6.1e-07  Score=49.25  Aligned_cols=51  Identities=16%  Similarity=0.123  Sum_probs=43.0

Q ss_pred             HHHHHHHHHHhhhh-CCCCCC-cccHHHHHHHHHHh-----CCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELF-DTDGSG-TIDAKELNVAMRAL-----GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~-D~d~~G-~I~~~el~~~l~~l-----g~~~~~~ei~~li~~~~   86 (87)
                      +..++.+..+|+.| |++|+| +|+..||+.+|+..     +...+..+++.+|+.++
T Consensus         5 E~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD   62 (93)
T d1ksoa_           5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLD   62 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHc
Confidence            45678899999998 999999 59999999999875     33457889999999886

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=98.41  E-value=3e-07  Score=50.17  Aligned_cols=51  Identities=18%  Similarity=0.283  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHhhhh-CCCCCC-cccHHHHHHHHHH---hCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELF-DTDGSG-TIDAKELNVAMRA---LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~-D~d~~G-~I~~~el~~~l~~---lg~~~~~~ei~~li~~~~   86 (87)
                      +..+..+..+|+.| |++++| +|+..||+.+++.   +|...++.+++.+|++++
T Consensus         5 E~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD   60 (89)
T d1k8ua_           5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLD   60 (89)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhc
Confidence            34578899999999 999998 6999999999997   566778899999999886

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=2.5e-07  Score=55.85  Aligned_cols=47  Identities=21%  Similarity=0.347  Sum_probs=37.1

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh-----CCCCCHHHHHHHHHH
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRAL-----GFEMTEEHGIVLVCT   84 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-----g~~~~~~ei~~li~~   84 (87)
                      ..+.++.+|+.||.|++|+|+.+||..+++.+     +..++.+++++++..
T Consensus        93 ~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~  144 (180)
T d1xo5a_          93 PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDN  144 (180)
T ss_dssp             HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHH
T ss_pred             HHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHH
Confidence            45679999999999999999999999999986     455666666655443

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.37  E-value=7.3e-07  Score=53.58  Aligned_cols=48  Identities=25%  Similarity=0.525  Sum_probs=44.0

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...++.+|+.||.+++|+|+.++|+.+|..+|..++.++++.+++.+.
T Consensus        85 ~~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d  132 (181)
T d1hqva_          85 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFD  132 (181)
T ss_dssp             HHHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHC
T ss_pred             ccccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhC
Confidence            456788999999999999999999999999999999999999998764

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=98.34  E-value=1.3e-07  Score=56.28  Aligned_cols=49  Identities=16%  Similarity=0.195  Sum_probs=41.6

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ......+..+|+.||.|++|+|+.+||+.+|..+|  ++.++++.++..++
T Consensus       101 ~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~--l~~~~~~~~f~~~D  149 (185)
T d2sasa_         101 AWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVIT  149 (185)
T ss_dssp             TTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcC--CCHHHHHHHHHHcC
Confidence            34456688999999999999999999999999876  46778898888765

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.33  E-value=4.7e-07  Score=53.92  Aligned_cols=46  Identities=30%  Similarity=0.471  Sum_probs=41.5

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVC   83 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~   83 (87)
                      ....++.+|+.||.+++|+|+..||+.+|..+|..++++.++.++.
T Consensus        75 ~~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~~  120 (173)
T d1alva_          75 NIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIR  120 (173)
T ss_dssp             HHHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             hhhHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHHHhhc
Confidence            4567889999999999999999999999999999999988877764

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.32  E-value=4.4e-07  Score=50.22  Aligned_cols=44  Identities=7%  Similarity=0.027  Sum_probs=39.3

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++++|+.+|.+++|+|+.++++.+|+..|  ++.+++..+++.++
T Consensus        12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~--L~~~~L~~i~~~~D   55 (99)
T d1qjta_          12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLAD   55 (99)
T ss_dssp             HHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHCCCCCCcccHHHHHHHHHHcC--CcHHHHHHHHHHHc
Confidence            477899999999999999999999999776  68899999998775

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=98.31  E-value=8.3e-07  Score=53.04  Aligned_cols=51  Identities=16%  Similarity=0.223  Sum_probs=41.5

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHH-----HHHHhCCCCCHHHHHHHHHHH
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNV-----AMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-----~l~~lg~~~~~~ei~~li~~~   85 (87)
                      .+..++.++.+|..||.|++|+|+.+||..     +++.+|...+..++..++.++
T Consensus         9 ~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   64 (189)
T d1qv0a_           9 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEA   64 (189)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHH
Confidence            466788999999999999999999999986     445678877777776666554

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=98.25  E-value=2.6e-07  Score=50.19  Aligned_cols=51  Identities=8%  Similarity=0.056  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHhhhh-CCCCCCcc-cHHHHHHHHHH-hCCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELF-DTDGSGTI-DAKELNVAMRA-LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~-D~d~~G~I-~~~el~~~l~~-lg~~~~~~ei~~li~~~~   86 (87)
                      +..++.+..+|+.| |++|+|.+ +.+||+.+|.. +|..++..+++++|++++
T Consensus         6 E~ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D   59 (87)
T d1xk4a1           6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELD   59 (87)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhC
Confidence            44567889999988 89999875 89999999985 677777888999999886

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=7e-07  Score=49.12  Aligned_cols=29  Identities=28%  Similarity=0.351  Sum_probs=26.6

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      ++.+|+.||.|++|+|+.+||..+|+.++
T Consensus        18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~   46 (99)
T d1snla_          18 PKTFFILHDINSDGVLDEQELEALFTKEL   46 (99)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHH
Confidence            68899999999999999999999998753

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=9e-07  Score=52.21  Aligned_cols=41  Identities=15%  Similarity=0.236  Sum_probs=36.0

Q ss_pred             cCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           30 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        30 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      ....++++++..|+++|..+|.|++|+|+.+||+.++...+
T Consensus         6 ~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~   46 (165)
T d1auib_           6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQ   46 (165)
T ss_dssp             CCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHT
T ss_pred             HcCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhccC
Confidence            34679999999999999999999999999999998776543

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=98.23  E-value=1.2e-06  Score=52.05  Aligned_cols=49  Identities=16%  Similarity=0.173  Sum_probs=37.9

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHH-----HhCCCCCHHHHHHHHHH
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMR-----ALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-----~lg~~~~~~ei~~li~~   84 (87)
                      +..+..++.+|+.||.|++|+|+.+||..++.     .+|..++..++...+..
T Consensus         8 p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~   61 (187)
T d1uhka1           8 PRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVE   61 (187)
T ss_dssp             HHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHH
Confidence            55678999999999999999999999977654     35666666665555443

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=98.21  E-value=1.2e-06  Score=51.61  Aligned_cols=50  Identities=16%  Similarity=0.177  Sum_probs=41.9

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .......++.+|+.+|.|++|+|+.+|++.+|+.+|.  +..++..+++.++
T Consensus        89 ~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~--~~~~~~~~f~~~D  138 (174)
T d2scpa_          89 KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGL--DKTMAPASFDAID  138 (174)
T ss_dssp             THHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC--CGGGHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhh--hhHHHHHHHhhcC
Confidence            3445566889999999999999999999999998874  6678888888765

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=98.20  E-value=6.9e-06  Score=42.26  Aligned_cols=54  Identities=17%  Similarity=0.287  Sum_probs=50.0

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ..+.+++.++..++|.+||++..+....++-..+|..+|...+..+.+.+++++
T Consensus         6 ralgpeekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkea   59 (86)
T d1j7qa_           6 RALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEA   59 (86)
T ss_dssp             CCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHH
T ss_pred             cccCchhHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHh
Confidence            567788899999999999999999999999999999999999999999999875

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.14  E-value=9.2e-07  Score=52.60  Aligned_cols=49  Identities=12%  Similarity=0.165  Sum_probs=40.4

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC--------CCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE--------MTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~--------~~~~ei~~li~~~~   86 (87)
                      +++.+|+++|..+|.+ +|.|+..||+.+|..+|..        ++.+.+..++...+
T Consensus         1 ee~~~~r~~F~~~d~~-dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d   57 (173)
T d1alva_           1 EEVRQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMD   57 (173)
T ss_dssp             CHHHHHHHHHHHHHGG-GTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHC
T ss_pred             ChHHHHHHHHHHHcCC-CCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhc
Confidence            3678999999999954 8999999999999987653        45678888887653

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.11  E-value=5.2e-06  Score=49.57  Aligned_cols=48  Identities=19%  Similarity=0.306  Sum_probs=39.3

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHH----hCCCCCHHHHHHHHHHH
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRA----LGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~----lg~~~~~~ei~~li~~~   85 (87)
                      ..+.++.+|+.||.|++|+|+.+|+..++..    .|..++...+++++..+
T Consensus        89 ~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~i  140 (183)
T d2zfda1          89 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKT  140 (183)
T ss_dssp             HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHH
Confidence            3456899999999999999999999987654    47788888877776654

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=8.1e-07  Score=52.86  Aligned_cols=49  Identities=22%  Similarity=0.315  Sum_probs=40.6

Q ss_pred             HHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC-----CCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE-----MTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~-----~~~~ei~~li~~~~   86 (87)
                      ++.+.++..|..++ +++|.|+..||+.+|+.+|.+     ++.++++.++..++
T Consensus         4 ~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D   57 (172)
T d1juoa_           4 QTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLD   57 (172)
T ss_dssp             CCCCTTHHHHHHHH-TTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHC
T ss_pred             chHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHC
Confidence            34456899999997 779999999999999999875     45788899988764

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=98.04  E-value=2.7e-06  Score=50.30  Aligned_cols=37  Identities=30%  Similarity=0.545  Sum_probs=33.3

Q ss_pred             CCCHHHHHHHHHHhhh-hCCCCCCcccHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFEL-FDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~-~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .|++.+..+++.+|+. ||.|++|+|+.+|+..+|..+
T Consensus         1 ~lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~   38 (185)
T d2sasa_           1 GLNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRY   38 (185)
T ss_dssp             CCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHh
Confidence            3788899999999997 599999999999999998765

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=98.02  E-value=1.6e-05  Score=42.90  Aligned_cols=51  Identities=12%  Similarity=0.029  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHhhhh-CCCCCC-cccHHHHHHHHHHh-----CCCCCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELF-DTDGSG-TIDAKELNVAMRAL-----GFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~-D~d~~G-~I~~~el~~~l~~l-----g~~~~~~ei~~li~~~~   86 (87)
                      +..++.+..+|+.| ++++++ +|+..||+.+|+..     +...+...++.+++.++
T Consensus         4 E~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD   61 (87)
T d1e8aa_           4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLD   61 (87)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHc
Confidence            34577899999999 456554 69999999999973     33457789999999886

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=97.97  E-value=3.6e-06  Score=53.43  Aligned_cols=48  Identities=10%  Similarity=0.109  Sum_probs=42.0

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC-CCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE-MTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~-~~~~ei~~li~~~~   86 (87)
                      ...+..+|..+|.|++|+|+..||+.+|..+|.+ ++..++..++..++
T Consensus       252 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D  300 (321)
T d1ij5a_         252 LLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVD  300 (321)
T ss_dssp             HHHHHHHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHT
T ss_pred             hhHHHHHHHHHhcCCCCCCcHHHHHHHHHHcCCCcCcHHHHHHHHHHhC
Confidence            3456678999999999999999999999999984 88889999998875

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=6.5e-06  Score=49.27  Aligned_cols=48  Identities=21%  Similarity=0.277  Sum_probs=36.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC------------CCCCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALG------------FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg------------~~~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|+|+.+|+..++..+.            .....+.++.+++.++
T Consensus        95 ~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D  154 (187)
T d1g8ia_          95 DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMD  154 (187)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhC
Confidence            45689999999999999999999999887541            1122355677777654

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=97.95  E-value=1.9e-06  Score=47.64  Aligned_cols=50  Identities=10%  Similarity=-0.019  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC-------CCHHHHHHHHHHHh
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE-------MTEEHGIVLVCTIV   86 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~-------~~~~ei~~li~~~~   86 (87)
                      +..+..+..+|+.|| +++|.|+..||+.+|+..+..       .+...|+.+|+.++
T Consensus         6 E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D   62 (100)
T d1psra_           6 ERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKD   62 (100)
T ss_dssp             HHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHC
T ss_pred             HHHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhc
Confidence            456777888888887 678999999999999986532       34456788887765

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.95  E-value=1.4e-05  Score=47.88  Aligned_cols=55  Identities=13%  Similarity=0.128  Sum_probs=43.7

Q ss_pred             CCCCHHHHHHHHHHhhhhCCC-CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTD-GSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d-~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      ...+.....+++.+|+.|+.+ ++|+|+.+||+.+|...|...+...++.+++.++
T Consensus        13 ~~~~~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D   68 (189)
T d1jbaa_          13 GAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFD   68 (189)
T ss_dssp             SSCCHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHC
T ss_pred             hccCccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhc
Confidence            456667777888888888665 4899999999999888888888888888887654

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=97.94  E-value=4.6e-06  Score=49.00  Aligned_cols=35  Identities=23%  Similarity=0.298  Sum_probs=31.1

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      |+-..++|+.+|+.||.|++|+|+.+||..++..+
T Consensus         1 s~~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~   35 (174)
T d2scpa_           1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERF   35 (174)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHH
Confidence            35567899999999999999999999999988765

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.88  E-value=1.3e-05  Score=46.68  Aligned_cols=44  Identities=18%  Similarity=0.410  Sum_probs=34.7

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh----CCCCCHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL----GFEMTEEHGIVLV   82 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l----g~~~~~~ei~~li   82 (87)
                      .+.|+.+|+.+|.|++|+|+.+||+.++..+    +......++..+.
T Consensus         6 ~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~   53 (176)
T d1nyaa_           6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLK   53 (176)
T ss_dssp             HHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHH
Confidence            4679999999999999999999999998765    4455555554443

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=97.86  E-value=2.9e-06  Score=50.90  Aligned_cols=44  Identities=32%  Similarity=0.493  Sum_probs=39.7

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .++.+|..+|.+++|+|+..+|+.+|..+|  ++..+++.+++.++
T Consensus        83 ~l~~aF~~~D~d~~G~i~~~el~~~l~~~g--l~~~ev~~~f~~~D  126 (182)
T d1s6ia_          83 NLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEID  126 (182)
T ss_dssp             STHHHHHHTTTTCSSEEEHHHHHHTTTTTT--CCTTHHHHHHHHHC
T ss_pred             HHHHHHHHHhhcCCCccchhhhhhhhhhcC--ccHHHHHHHHHHhh
Confidence            578999999999999999999999999887  67889999998875

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.86  E-value=1.1e-05  Score=47.75  Aligned_cols=49  Identities=24%  Similarity=0.323  Sum_probs=38.7

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC------------CCCCHHHHHHHHHHHh
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALG------------FEMTEEHGIVLVCTIV   86 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg------------~~~~~~ei~~li~~~~   86 (87)
                      ..+.++.+|+.||.|++|+|+.+|+..++..+.            ..+..+.++.+|+.++
T Consensus        93 ~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D  153 (181)
T d1bjfa_          93 LEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMD  153 (181)
T ss_dssp             HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSC
T ss_pred             hHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhC
Confidence            355789999999999999999999999998652            1344567778877654

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=97.82  E-value=2.8e-05  Score=43.51  Aligned_cols=48  Identities=23%  Similarity=0.344  Sum_probs=38.4

Q ss_pred             CHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 048414           35 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~~   86 (87)
                      .......++.+|+.+|.+++|+|+.++++.++..+|.    +.+..+|..++
T Consensus        70 ~~~~~~~~~~~F~~~D~~~~g~i~~~el~~~~~~~~~----~~~~~~~~~~D  117 (134)
T d1jfja_          70 LSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKAD  117 (134)
T ss_dssp             SHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTC----HHHHHHHHHHH
T ss_pred             cccccccccccccccccccCCcccHHHHHHHHHhcCc----HHHHHHHHHHC
Confidence            3455667899999999999999999999999987664    46777776654

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.80  E-value=2.4e-05  Score=46.90  Aligned_cols=48  Identities=19%  Similarity=0.187  Sum_probs=37.3

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC------------CCHHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE------------MTEEHGIVLVCTIV   86 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~------------~~~~ei~~li~~~~   86 (87)
                      .+.++.+|+.||.|++|.|+.+|+..++..++..            .....++.+++.++
T Consensus        98 ~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D  157 (190)
T d1fpwa_          98 EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMD  157 (190)
T ss_dssp             THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhC
Confidence            4678999999999999999999999999875321            11456777877764

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=3.3e-05  Score=45.16  Aligned_cols=48  Identities=25%  Similarity=0.419  Sum_probs=38.0

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHHHHH
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRAL-GFEMTEEHGIVLVCTI   85 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-g~~~~~~ei~~li~~~   85 (87)
                      ....++.+|+.||.|++|+|+.+||..+++.. |..++....+.++..+
T Consensus        83 ~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~  131 (165)
T d1auib_          83 KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKT  131 (165)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHH
Confidence            45679999999999999999999999999764 6777766555554443

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=97.79  E-value=8.9e-06  Score=48.77  Aligned_cols=52  Identities=15%  Similarity=0.201  Sum_probs=41.3

Q ss_pred             CCHHHH-HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC--------CCHHHHHHHHHHHh
Q 048414           34 LSQQKK-QEIKEAFELFDTDGSGTIDAKELNVAMRALGFE--------MTEEHGIVLVCTIV   86 (87)
Q Consensus        34 ~~~~~~-~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~--------~~~~ei~~li~~~~   86 (87)
                      ++++++ +.++.+|..+| +++|.|+..||+.+|..+|..        ++.+.+..++..++
T Consensus        11 ~~~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D   71 (186)
T d1df0a1          11 ANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLD   71 (186)
T ss_dssp             CCCSCSCHHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHc
Confidence            444444 45899999999 899999999999999987543        56778888887654

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.64  E-value=9.6e-05  Score=43.80  Aligned_cols=53  Identities=13%  Similarity=0.136  Sum_probs=40.9

Q ss_pred             CCCCHHHHHHHHHHhhhhCCC--CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTD--GSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d--~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ..++.+++..|++.|..+|.+  ++|+|+.++++.++...+...+. .++.+++.+
T Consensus         9 t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~-~~~~lf~~~   63 (183)
T d2zfda1           9 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL-FADRVFDLF   63 (183)
T ss_dssp             SSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCCH-HHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCCCH-HHHHHHHHH
Confidence            578899999999999998865  68999999999888777665443 456666554

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.62  E-value=3.1e-05  Score=39.30  Aligned_cols=29  Identities=31%  Similarity=0.619  Sum_probs=26.0

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      +++..+|..+|.|++|.|+.+|+..+|..
T Consensus        37 ~~i~~~~~~~D~d~dg~I~~~EF~~~m~~   65 (67)
T d1tiza_          37 EDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            45788899999999999999999998875

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=97.55  E-value=2.1e-06  Score=52.25  Aligned_cols=54  Identities=19%  Similarity=0.180  Sum_probs=29.1

Q ss_pred             CCCCHHHHH-HHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC--------CCHHHHHHHHHHHh
Q 048414           32 HGLSQQKKQ-EIKEAFELFDTDGSGTIDAKELNVAMRALGFE--------MTEEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~-~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~--------~~~~ei~~li~~~~   86 (87)
                      ..+++++++ .++.+|..+|. ++|.|+..||+.+|..+|..        ++.+.++.+|..++
T Consensus        11 ~~ls~~~~~~~~r~~F~~~d~-~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D   73 (188)
T d1qxpa2          11 KVLSEEEIDDNFKTLFSKLAG-DDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMD   73 (188)
T ss_dssp             ----------------CCCCC-SSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHHHcC-CCCEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhc
Confidence            456777764 59999999995 47999999999998766543        45678888888764

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.50  E-value=0.00011  Score=44.14  Aligned_cols=33  Identities=36%  Similarity=0.496  Sum_probs=27.7

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFE   72 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~   72 (87)
                      +.++.+|+.||.|++|+|+.+|+..+++.++..
T Consensus        99 ~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~  131 (201)
T d1omra_          99 QKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKM  131 (201)
T ss_dssp             GSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHccCCCCccCHHHHHHHHHHHHhh
Confidence            358889999999999999999999988876443

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.43  E-value=0.00014  Score=43.41  Aligned_cols=44  Identities=20%  Similarity=0.196  Sum_probs=28.6

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ...+|..||.+++|.|+..|+..++..++.....+.++.+++..
T Consensus        65 ~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~e~~~~~F~~~  108 (190)
T d1fpwa_          65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELY  108 (190)
T ss_dssp             HHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHHHHHHHH
T ss_pred             HHHHHHHhCcCCCCcccHHHHHHHHHHHccCchHHHHHHHHHHh
Confidence            34566777777777777777777666666555566666666544

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.41  E-value=0.00018  Score=42.74  Aligned_cols=47  Identities=26%  Similarity=0.201  Sum_probs=37.5

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCTI   85 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~~   85 (87)
                      ...+..+|+.||.|++|.|+..|+..++..+......+.++.+++.+
T Consensus        57 ~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~~~~F~~~  103 (189)
T d1jbaa_          57 TQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIY  103 (189)
T ss_dssp             HHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHHHHHHhhh
Confidence            34578899999999999999999999998876656666676666544

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=6.6e-05  Score=44.50  Aligned_cols=46  Identities=13%  Similarity=0.145  Sum_probs=26.2

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC----------CCHHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFE----------MTEEHGIVLVCTI   85 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~----------~~~~ei~~li~~~   85 (87)
                      .++..+|..||.|++|+|+.+||..+|......          ++.+.+..+|...
T Consensus        78 ~ei~~~F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~  133 (170)
T d2zkmx1          78 PEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKY  133 (170)
T ss_dssp             HHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHH
Confidence            357788999999999999999999999876433          4566677777654

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=0.00019  Score=42.42  Aligned_cols=43  Identities=19%  Similarity=0.298  Sum_probs=34.1

Q ss_pred             HHHhhhhCCCCCCcccHHHHHHHHHHhCCCC-----CHHHHHHHHHHHh
Q 048414           43 KEAFELFDTDGSGTIDAKELNVAMRALGFEM-----TEEHGIVLVCTIV   86 (87)
Q Consensus        43 ~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~-----~~~ei~~li~~~~   86 (87)
                      ...|..+ .+.+|.|+.+||+.+|+.+|.+.     +.+.++.||..++
T Consensus         3 ~~~F~~~-a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D   50 (165)
T d1k94a_           3 YTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLD   50 (165)
T ss_dssp             HHHHHHH-HGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHh-cCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhC
Confidence            4456655 47899999999999999998754     5678888887664

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.00015  Score=39.28  Aligned_cols=33  Identities=9%  Similarity=0.169  Sum_probs=28.1

Q ss_pred             HHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           36 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      ......+..+|+.+|.|++|.|+.+|+..+++.
T Consensus        64 ~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~   96 (99)
T d1snla_          64 EERLRMREHVMKNVDTNQDRLVTLEEFLASTQR   96 (99)
T ss_dssp             HHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence            334556889999999999999999999988764

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=97.26  E-value=0.00019  Score=38.77  Aligned_cols=32  Identities=13%  Similarity=0.302  Sum_probs=28.0

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      .+.+..+|+.+|.|+||.|+.+|+..++..+.
T Consensus        51 ~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l~   82 (93)
T d3c1va1          51 EAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA   82 (93)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Confidence            45688899999999999999999999887753

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=97.25  E-value=0.00024  Score=36.69  Aligned_cols=31  Identities=23%  Similarity=0.334  Sum_probs=27.1

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      .++..+|+.+|.|++|.|+.+|+..+|+...
T Consensus        45 ~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~~   75 (77)
T d1oqpa_          45 EELQEMIAEADRNDDNEIDEDEFIRIMKKTS   75 (77)
T ss_dssp             HHHHHHHHHHCCSSSSEECHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHHccC
Confidence            4577889999999999999999999987654

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=97.21  E-value=0.00023  Score=37.24  Aligned_cols=30  Identities=33%  Similarity=0.448  Sum_probs=26.8

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++..+|+.+|.|++|.|+.+|+..++...
T Consensus        41 ~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~   70 (81)
T d2opoa1          41 DEVRRMMAEIDTDGDGFISFDEFTDFARAN   70 (81)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCCeEeHHHHHHHHHHC
Confidence            457889999999999999999999988764

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.21  E-value=0.00027  Score=42.28  Aligned_cols=54  Identities=11%  Similarity=0.049  Sum_probs=40.2

Q ss_pred             CCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCC-HHHHHHHHHHHh
Q 048414           31 HHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT-EEHGIVLVCTIV   86 (87)
Q Consensus        31 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~-~~ei~~li~~~~   86 (87)
                      ...++..++..|.+.|...  +++|.|+.+|++.+|..++.... ...++.++..++
T Consensus        19 ~t~f~~~ei~~l~~~F~~~--~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D   73 (201)
T d1omra_          19 NTKFTEEELSSWYQSFLKE--CPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFD   73 (201)
T ss_dssp             GCSSCHHHHHHHHHHHHHH--CTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTT
T ss_pred             hCCCCHHHHHHHHHHHHHH--CcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhc
Confidence            3568888888888888544  46799999999999999876544 444567776554

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.20  E-value=0.00011  Score=40.63  Aligned_cols=28  Identities=32%  Similarity=0.510  Sum_probs=24.9

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      ++++.+|+.+|.|++|.|+.+|+..+|+
T Consensus        80 ~~~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          80 SETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             HHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            4477889999999999999999999875

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.13  E-value=0.00027  Score=36.51  Aligned_cols=34  Identities=21%  Similarity=0.352  Sum_probs=28.0

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .++.+   ++..+|+.+|.+++|.|+.+|+..+|..+
T Consensus        41 ~~~~~---e~~~~~~~~D~d~dg~I~~~EF~~~m~~~   74 (75)
T d1jc2a_          41 HVIEE---DIEDLMKDSDKNNDGRIDFDEFLKMMEGV   74 (75)
T ss_dssp             CCCHH---HHHHHHHHHCSSSCSEECHHHHHHHHHTC
T ss_pred             CccHH---HHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence            45544   47778999999999999999999988753

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=97.12  E-value=0.0019  Score=34.64  Aligned_cols=50  Identities=14%  Similarity=0.164  Sum_probs=39.1

Q ss_pred             HHHHHHHHHhhhhC-CCCC-CcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFD-TDGS-GTIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D-~d~~-G~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~   86 (87)
                      ..+..+..+|+.|. .+|+ ++++..||+.+|+.     ++..-++..++.+++.++
T Consensus         6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD   62 (90)
T d3cr5x1           6 KAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLD   62 (90)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhc
Confidence            45678999999994 4554 57999999999997     344456778999999876

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=97.11  E-value=0.00019  Score=36.49  Aligned_cols=28  Identities=36%  Similarity=0.555  Sum_probs=24.9

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      +++..+|+.+|.|++|.|+.+|+..+|.
T Consensus        39 ~e~~~~~~~~D~d~dG~i~~~EF~~~m~   66 (68)
T d1c7va_          39 AEVEEAMKEADEDGNGVIDIPEFMDLIK   66 (68)
T ss_dssp             HHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            4577889999999999999999998875

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.10  E-value=0.00024  Score=36.71  Aligned_cols=29  Identities=28%  Similarity=0.527  Sum_probs=26.3

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ++..+|..+|.|++|.|+.+|+..+|..+
T Consensus        46 ei~~~~~~~D~d~dG~I~f~EF~~~m~~~   74 (76)
T d1qx2a_          46 TLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             SHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence            47889999999999999999999998765

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=97.10  E-value=0.00017  Score=37.78  Aligned_cols=33  Identities=24%  Similarity=0.374  Sum_probs=27.2

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      .++.+   ++..+|+.+|.|++|+|+.+|+..+|+.
T Consensus        47 ~~~~~---ev~~~~~~~D~d~dg~I~~~EF~~~m~~   79 (81)
T d1fi5a_          47 TITED---DIEELMKDGDKNNDGRIDYDEFLEFMKG   79 (81)
T ss_dssp             CCCHH---HHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred             CCCHH---HHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            45544   4777899999999999999999998864

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=97.06  E-value=0.00031  Score=38.71  Aligned_cols=28  Identities=29%  Similarity=0.402  Sum_probs=24.9

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      +.++.+|+.+|.|++|.|+.+|+..+|+
T Consensus        79 ~~~~~l~~~~D~d~dG~I~~~EF~~~m~  106 (107)
T d2pvba_          79 AETKAFLADGDKDGDGMIGVDEFAAMIK  106 (107)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            4577889999999999999999998876

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.06  E-value=0.00067  Score=39.66  Aligned_cols=52  Identities=10%  Similarity=0.055  Sum_probs=33.5

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCC-HHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT-EEHGIVLVCTI   85 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~-~~ei~~li~~~   85 (87)
                      ..++..+++.+.+.|...  +++|.|+.+++..+|..++...+ ...++.+++.+
T Consensus         8 t~ft~~ei~~l~~~F~~~--~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~   60 (178)
T d1s6ca_           8 TNFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAF   60 (178)
T ss_dssp             SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHH--CcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence            456777776666666443  45678888888888877765543 33346666654

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=97.04  E-value=0.00029  Score=37.85  Aligned_cols=32  Identities=25%  Similarity=0.478  Sum_probs=27.6

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      ...+..+|+.+|.|++|.|+.+|+..+|..+.
T Consensus        51 ~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l~   82 (93)
T d1zfsa1          51 ADAVDKIMKELDENGDGEVDFQEFVVLVAALT   82 (93)
T ss_dssp             HHHHHHHHHHHTTTCCSEECSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            45578889999999999999999999887653

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=97.03  E-value=0.0004  Score=37.35  Aligned_cols=29  Identities=10%  Similarity=0.211  Sum_probs=26.0

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .+.++|..+|.|++|.|+.+|+..++..+
T Consensus        50 ~v~~~~~~~D~n~DG~I~F~EF~~li~~l   78 (92)
T d1a4pa_          50 AVDKIMKDLDQCRDGKVGFQSFFSLIAGL   78 (92)
T ss_dssp             HHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence            47888999999999999999999888765

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=97.01  E-value=0.00034  Score=38.70  Aligned_cols=32  Identities=25%  Similarity=0.440  Sum_probs=26.6

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      .++.++   +..+|+.+|.|++|.|+.+|+..+|.
T Consensus        76 ~ls~~e---v~~~~~~~D~d~dG~I~~~EF~~~m~  107 (109)
T d1pvaa_          76 DLTDAE---TKAFLKAADKDGDGKIGIDEFETLVH  107 (109)
T ss_dssp             CCCHHH---HHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             CCCHHH---HHHHHHHHCCCCcCcEeHHHHHHHHH
Confidence            455544   67788999999999999999999875

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=96.94  E-value=0.00046  Score=38.01  Aligned_cols=28  Identities=29%  Similarity=0.419  Sum_probs=24.8

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      ++..+|+.+|.|++|.|+.+|+..+|..
T Consensus        81 e~~~~~~~~D~d~dG~i~~~EF~~~m~~  108 (109)
T d1rwya_          81 ETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             HHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            4778899999999999999999998863

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=96.93  E-value=0.00051  Score=37.94  Aligned_cols=33  Identities=27%  Similarity=0.344  Sum_probs=27.2

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      .++.+   ++..+|+.+|.|++|.|+.+|+..+|..
T Consensus        76 ~~~~~---e~~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d5pala_          76 DLNDT---ETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             CCCHH---HHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             cCCHH---HHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            45544   4778899999999999999999998864

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.93  E-value=0.00064  Score=39.81  Aligned_cols=53  Identities=13%  Similarity=0.037  Sum_probs=38.5

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCC-HHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT-EEHGIVLVCTIV   86 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~-~~ei~~li~~~~   86 (87)
                      ..++.++++.+...|..  .+++|+|+.+++..+|..++...+ ...++.++..++
T Consensus        16 t~fs~~ei~~l~~~F~~--~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d   69 (181)
T d1bjfa_          16 TDFTEHEIQEWYKGFLR--DCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFD   69 (181)
T ss_dssp             SSCCHHHHHHHHHHHHH--HSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHC
T ss_pred             cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcC
Confidence            46788888888888754  456789999999999888765544 445677776543

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=96.93  E-value=0.00064  Score=34.69  Aligned_cols=29  Identities=34%  Similarity=0.554  Sum_probs=25.5

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      .+.+..+|+.+|.+++|.|+.+|+..+|.
T Consensus        43 ~~~~~~~~~~~D~d~~g~I~f~eF~~~m~   71 (73)
T d2pq3a1          43 EAELQDMINEVDADGNGTIDFPEFLTMMA   71 (73)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            34578899999999999999999998875

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=96.90  E-value=0.00072  Score=35.24  Aligned_cols=33  Identities=39%  Similarity=0.532  Sum_probs=27.1

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      .+++.   ++..+|+.+|.|++|.|+.+|+..+|..
T Consensus        46 ~~s~~---e~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_          46 NPTKE---ELDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             CCCHH---HHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             CCCHH---HHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            45544   4778899999999999999999988753

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=96.86  E-value=0.00075  Score=35.38  Aligned_cols=30  Identities=40%  Similarity=0.591  Sum_probs=26.0

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      ..+++.+|..+|.|++|.|+.+|+..+|..
T Consensus        51 ~~el~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1          51 PEELQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            355888899999999999999999988753

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.81  E-value=0.00043  Score=34.64  Aligned_cols=27  Identities=30%  Similarity=0.500  Sum_probs=23.4

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAM   66 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l   66 (87)
                      .++..+|..+|.|++|.|+.+|+..+|
T Consensus        39 ~e~~~l~~~~D~d~~g~I~~~eF~~~m   65 (65)
T d1fw4a_          39 EEVDEMIREADIDGDGQVNYEEFVQMM   65 (65)
T ss_dssp             HHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred             HHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence            457888999999999999999998764

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.77  E-value=0.00095  Score=35.58  Aligned_cols=29  Identities=28%  Similarity=0.416  Sum_probs=25.0

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      ..+..+|+.+|.|++|+|+.+|+..+|+-
T Consensus        43 ~~l~~i~~~~D~d~dG~l~~~EF~~a~~l   71 (92)
T d1fi6a_          43 LELSHIWELSDFDKDGALTLDEFCAAFHL   71 (92)
T ss_dssp             HHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCeecHHHHHHHHHH
Confidence            45888999999999999999999876654

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00039  Score=37.46  Aligned_cols=34  Identities=21%  Similarity=0.430  Sum_probs=27.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      ..++.   ..+..+|+.+|.|++|+|+.+|+..+|.-
T Consensus        39 ~~l~~---~~l~~i~~~~D~d~dG~l~~~EF~~am~L   72 (95)
T d1c07a_          39 TGLPS---TLLAHIWSLCDTKDCGKLSKDQFALAFHL   72 (95)
T ss_dssp             TTCCH---HHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred             cCCCH---HHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            34554   35778999999999999999999877653

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=96.72  E-value=0.00056  Score=36.92  Aligned_cols=32  Identities=16%  Similarity=0.229  Sum_probs=28.1

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      ...+.++++.+|.|+||.|+.+|+..++..+.
T Consensus        51 ~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l~   82 (93)
T d1ksoa_          51 ECDYNKFMSVLDTNKDCEVDFVEYVRSLACLC   82 (93)
T ss_dssp             HHHHHHHHHHHHHTTTCEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            45688999999999999999999999887653

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.70  E-value=0.00083  Score=36.43  Aligned_cols=37  Identities=32%  Similarity=0.602  Sum_probs=29.9

Q ss_pred             cCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           30 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        30 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ....++.+   .+..+|+.+|.|++|.|+.+|+..+|+-+
T Consensus        38 ~~s~L~~~---~L~~i~~~~D~d~dG~L~~~EF~~am~Li   74 (99)
T d1qjta_          38 KKSGLPDL---ILGKIWDLADTDGKGVLSKQEFFVALRLV   74 (99)
T ss_dssp             HTSSSCHH---HHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred             HHcCCcHH---HHHHHHHHHcCCCCCccCHHHHHHHHHHH
Confidence            33567644   58889999999999999999999888743

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.65  E-value=0.001  Score=38.89  Aligned_cols=42  Identities=19%  Similarity=0.175  Sum_probs=27.4

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVC   83 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~   83 (87)
                      ...+|+.||.+++|.|+..|+..++..+......+.++.+++
T Consensus        53 ~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~~~~~~~f~   94 (178)
T d1s6ca_          53 AHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFN   94 (178)
T ss_dssp             HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHHHhccchHHHHHHHHH
Confidence            466788888888888888888777655433333444444443

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=96.54  E-value=0.0022  Score=34.71  Aligned_cols=50  Identities=12%  Similarity=0.078  Sum_probs=38.8

Q ss_pred             HHHHHHHHHhhhhC-CCCC-CcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFD-TDGS-GTIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D-~d~~-G~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~   86 (87)
                      ..+..+..+|+.|. ++|+ ++++..||+.+|..     ++..-+...++.+++.++
T Consensus         6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD   62 (95)
T d1qlsa_           6 RCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLD   62 (95)
T ss_dssp             HHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhc
Confidence            44678899999985 4554 67999999999976     444456778999999876

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.53  E-value=0.00058  Score=35.52  Aligned_cols=29  Identities=21%  Similarity=0.591  Sum_probs=25.8

Q ss_pred             HHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           42 IKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      +..+|..+|.|++|.|+.+|+..+|..+.
T Consensus        49 v~~~~~~~D~d~dG~Idf~EF~~l~~~la   77 (78)
T d1cb1a_          49 LDDLFQELDKNGDGEVSFEEFQVLVKKIS   77 (78)
T ss_dssp             SSHHHHHTCCCSSSSEEHHHHHHHHHHHC
T ss_pred             HHHHHHHHcCCCCCcCcHHHHHHHHHHHh
Confidence            66789999999999999999999988763

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=96.52  E-value=0.00072  Score=36.77  Aligned_cols=29  Identities=21%  Similarity=0.284  Sum_probs=25.4

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .+.++|+.+|.|++|.|+.+|+..++..+
T Consensus        53 ~v~~~~~~~D~n~DG~I~F~EF~~li~~l   81 (100)
T d1psra_          53 YLADVFEKKDKNEDKKIDFSEFLSLLGDI   81 (100)
T ss_dssp             GGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            36678999999999999999999988765

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.50  E-value=0.0013  Score=33.71  Aligned_cols=28  Identities=25%  Similarity=0.419  Sum_probs=24.8

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMR   67 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (87)
                      .++..+|..+|.+++|.|+.+|+..+|.
T Consensus        46 ~e~~~~~~~~D~~~~g~I~~~eF~~~m~   73 (77)
T d1f54a_          46 AEVNDLMNEIDVDGNHQIEFSEFLALMS   73 (77)
T ss_dssp             HHHHHHHHTTCCSSCCEEEHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            4588899999999999999999998774

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.0017  Score=34.87  Aligned_cols=34  Identities=32%  Similarity=0.420  Sum_probs=27.6

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      ..++.+   .+..+++.+|.|++|+|+.+|+..++.-
T Consensus        38 ~gl~~~---~L~~Iw~~~D~~~dG~l~~~EF~~a~~L   71 (95)
T d2jxca1          38 SKLPVD---ILGRVWELSDIDHDGMLDRDEFAVAMFL   71 (95)
T ss_dssp             SSCCHH---HHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             cCCCHH---HHHHHHHHhcCCCCCeEcHHHHHHHHHH
Confidence            456543   5889999999999999999999776653

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=96.47  E-value=0.0019  Score=34.32  Aligned_cols=31  Identities=23%  Similarity=0.297  Sum_probs=27.3

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ...+.++|+.+|.|+||.|+..|+..++..+
T Consensus        50 ~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l   80 (87)
T d1e8aa_          50 KAVIDEIFQGLDANQDEQVDFQEFISLVAIA   80 (87)
T ss_dssp             HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence            4568899999999999999999999888764

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=96.46  E-value=0.0018  Score=34.32  Aligned_cols=29  Identities=14%  Similarity=0.281  Sum_probs=26.0

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .+.++|+.+|.|+||.|+.+|+..++..+
T Consensus        50 ~v~~i~~~~D~n~DG~IdF~EF~~l~~~l   78 (87)
T d1xk4a1          50 GADVWFKELDINTDGAVNFQEFLILVIKM   78 (87)
T ss_dssp             CHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            47788999999999999999999988765

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=96.44  E-value=0.0019  Score=34.94  Aligned_cols=29  Identities=14%  Similarity=0.234  Sum_probs=26.0

Q ss_pred             HHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           41 EIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      .+..+|..+|.|++|.|+..|+..++..+
T Consensus        55 ~v~~l~~~~D~d~DG~IdF~EF~~l~~~l   83 (98)
T d1yuta1          55 SLDEKMKSLDVNQDSELKFNEYWRLIGEL   83 (98)
T ss_dssp             CHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            47889999999999999999999988764

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.0017  Score=38.37  Aligned_cols=36  Identities=28%  Similarity=0.385  Sum_probs=28.5

Q ss_pred             CCCHHHHHH-HHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           33 GLSQQKKQE-IKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        33 ~~~~~~~~~-l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      .+++++.++ +..+|+.+|.|++|.|+.+|+..++..
T Consensus       132 ~~~~~~~~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~  168 (180)
T d1xo5a_         132 RLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR  168 (180)
T ss_dssp             CCCCTTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            344455554 456899999999999999999998875

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=96.30  E-value=0.0015  Score=34.90  Aligned_cols=30  Identities=23%  Similarity=0.293  Sum_probs=26.8

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ..+.++++.+|.|+||.|+.+|+..++..+
T Consensus        50 ~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l   79 (89)
T d1k8ua_          50 AEIARLMEDLDRNKDQEVNFQEYVTFLGAL   79 (89)
T ss_dssp             HHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence            458889999999999999999999988765

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=96.26  E-value=0.0062  Score=32.78  Aligned_cols=50  Identities=22%  Similarity=0.244  Sum_probs=35.0

Q ss_pred             HHHHHHHHHhhhhC-CCCC-CcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFD-TDGS-GTIDAKELNVAMRA-----LGFEMTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D-~d~~-G~I~~~el~~~l~~-----lg~~~~~~ei~~li~~~~   86 (87)
                      ..+..+..+|+.|- .+|+ ++++..||+.+|..     ++..-++..++.+++.++
T Consensus         6 ~ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD   62 (94)
T d1j55a_           6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLD   62 (94)
T ss_dssp             HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhc
Confidence            45678899999995 3443 68999999999986     333344667999998876

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.012  Score=34.32  Aligned_cols=52  Identities=12%  Similarity=0.026  Sum_probs=31.9

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHH-HHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEH-GIVLVCTI   85 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e-i~~li~~~   85 (87)
                      ..++..++..|.+.|...+  ++|.|+..++..++..++....... ++.++..+
T Consensus        17 t~fs~~Ei~~l~~~F~~~~--~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~   69 (187)
T d1g8ia_          17 TYFTEKEVQQWYKGFIKDC--PSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVF   69 (187)
T ss_dssp             SSSCHHHHHHHHHHHHHHC--TTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHC--CCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHh
Confidence            4567777766666665443  4577777777777777665544333 34555544

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.0027  Score=32.84  Aligned_cols=31  Identities=6%  Similarity=0.215  Sum_probs=25.3

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAM   66 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l   66 (87)
                      .+++++   +..+|..+|.+++|.|+..|+...|
T Consensus        52 ~l~~~e---~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          52 ILTDEQ---FDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             CCCHHH---HHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             CCChhH---HHHHhhccccCCCCcEeHHHHHHHh
Confidence            455444   6788999999999999999998765

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.0033  Score=34.58  Aligned_cols=35  Identities=26%  Similarity=0.369  Sum_probs=27.5

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ..++.+.   |..+++.+|.|++|+|+.+|+..+|+-+
T Consensus        51 s~L~~~~---L~~Iw~l~D~d~dG~l~~~EF~~am~Li   85 (110)
T d1iq3a_          51 SKLSIPE---LSYIWELSDADCDGALTLPEFCAAFHLI   85 (110)
T ss_dssp             SSCSSCC---HHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred             hccchHH---HHHHHHHhccCCCCeECHHHHHHHHHHH
Confidence            3455433   7778889999999999999999877644

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=96.02  E-value=0.00097  Score=35.26  Aligned_cols=26  Identities=46%  Similarity=0.552  Sum_probs=22.4

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVA   65 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~   65 (87)
                      +++..+|+.+|.|++|.|+.+|+..+
T Consensus        59 ~e~~~l~~~~D~d~~g~I~~~EFl~a   84 (87)
T d1s6ja_          59 SEIKDLMDAADIDKSGTIDYGEFIAA   84 (87)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHTTC
T ss_pred             HHHHHHHHHcCCCCCCeEeHHHHHHH
Confidence            35788899999999999999998654

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.01  E-value=0.0027  Score=31.12  Aligned_cols=28  Identities=29%  Similarity=0.464  Sum_probs=22.8

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELN   63 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~   63 (87)
                      .+++.   ++..+|+.+|.|++|.|+.+|+-
T Consensus        33 ~~~~~---ei~~l~~~~D~d~dg~I~~~eFl   60 (61)
T d2fcea1          33 KLTDA---EVDELLKGVEVDSNGEIDYKKFI   60 (61)
T ss_dssp             CCCHH---HHHHHHTTCCCCTTSEECHHHHH
T ss_pred             CCCHH---HHHHHHHHcCCCCCCcEeHHHhc
Confidence            45544   47788999999999999999874

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=95.68  E-value=0.0086  Score=32.27  Aligned_cols=31  Identities=19%  Similarity=0.333  Sum_probs=26.9

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHhC
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRALG   70 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg   70 (87)
                      ..+.++|+.+|.|+||.|+.+|+..++..+.
T Consensus        52 ~~vd~im~~LD~n~Dg~vdF~EF~~li~~la   82 (95)
T d1qlsa_          52 GVLDRMMKKLDLDSDGQLDFQEFLNLIGGLA   82 (95)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence            4588899999999999999999998887653

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=95.39  E-value=0.012  Score=31.28  Aligned_cols=31  Identities=23%  Similarity=0.471  Sum_probs=26.9

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ...+.++|+.+|.|+||.|+.+|+..++..+
T Consensus        51 ~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~l   81 (90)
T d3cr5x1          51 QEVVDKVMETLDSDGDGECDFQEFMAFVAMI   81 (90)
T ss_dssp             HHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            4458889999999999999999999887765

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=95.28  E-value=0.015  Score=30.50  Aligned_cols=30  Identities=20%  Similarity=0.297  Sum_probs=26.2

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      ...+.++|+.+|.|+||.|+.+|+..++..
T Consensus        53 ~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~   82 (83)
T d1xk4c1          53 EKVIEHIMEDLDTNADKQLSFEEFIMLMAR   82 (83)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence            456888999999999999999999987754

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=94.98  E-value=0.011  Score=31.74  Aligned_cols=31  Identities=23%  Similarity=0.428  Sum_probs=26.6

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l   69 (87)
                      ...+.++|+.+|.|+||.|+.+|+..++..+
T Consensus        51 ~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l   81 (94)
T d1j55a_          51 KDAVDKLLKDLDANGDAQVDFSEFIVFVAAI   81 (94)
T ss_dssp             -CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            4458899999999999999999999887664

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.70  E-value=0.0096  Score=34.70  Aligned_cols=29  Identities=14%  Similarity=0.138  Sum_probs=23.3

Q ss_pred             HHHHHhhh--hCCCCCCcccHHHHHHHHHHh
Q 048414           41 EIKEAFEL--FDTDGSGTIDAKELNVAMRAL   69 (87)
Q Consensus        41 ~l~~~F~~--~D~d~~G~I~~~el~~~l~~l   69 (87)
                      -|+++|..  +|.|++|.|+.+||..+|+.+
T Consensus         6 ~l~k~~~k~~~d~n~dG~Is~~el~k~l~~~   36 (170)
T d2zkmx1           6 FLDKILVKLKMQLNSEGKIPVKNFFQMFPAD   36 (170)
T ss_dssp             HHHHHHHHHHHSCCTTSCEEHHHHHHHSCSC
T ss_pred             HHHHHHHHHhcccCCCCCCcHHHHHHHHHHh
Confidence            45666665  799999999999999888543

>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Homeobox protein hox-b1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.11  E-value=0.17  Score=26.50  Aligned_cols=46  Identities=9%  Similarity=0.109  Sum_probs=38.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|..+|.     .+-+.+.++...+-..+|  ++...|..+|+.
T Consensus        32 t~ft~~Ql~~Le~~F~-----~n~yPs~~~r~~LA~~l~--l~~~~V~vWFqN   77 (88)
T d1b72a_          32 TNFTTRQLTELEKEFH-----FNKYLSRARRVEIAATLE--LNETQVKIWFQN   77 (88)
T ss_dssp             CCCCHHHHHHHHHHHT-----TCSSCCHHHHHHHHHHHT--CCHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHH-----hCCCCchHHHHHHHHHcC--CCHHHeeeccHh
Confidence            5799999999999996     345899999988888887  688888888763

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=93.72  E-value=0.2  Score=25.95  Aligned_cols=50  Identities=16%  Similarity=0.169  Sum_probs=36.6

Q ss_pred             HHHHHHHHHhhhhCC-CC-CCcccHHHHHHHHHH-hCCC-----CCHHHHHHHHHHHh
Q 048414           37 QKKQEIKEAFELFDT-DG-SGTIDAKELNVAMRA-LGFE-----MTEEHGIVLVCTIV   86 (87)
Q Consensus        37 ~~~~~l~~~F~~~D~-d~-~G~I~~~el~~~l~~-lg~~-----~~~~ei~~li~~~~   86 (87)
                      .-+..+..+|+.|-. +| .++++..||+.+|.. ++.-     -.+..++.+++.++
T Consensus         7 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD   64 (83)
T d1xk4c1           7 RNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLD   64 (83)
T ss_dssp             HHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhc
Confidence            346788999999953 33 468999999999996 4322     24556888998876

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.33  E-value=0.041  Score=30.38  Aligned_cols=31  Identities=13%  Similarity=0.223  Sum_probs=26.0

Q ss_pred             HHHHHHHhhhhCCCCC--------CcccHHHHHHHHHHh
Q 048414           39 KQEIKEAFELFDTDGS--------GTIDAKELNVAMRAL   69 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~--------G~I~~~el~~~l~~l   69 (87)
                      ..-...+|+.||.+++        |.|+..|+...|.-+
T Consensus        68 ~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~efv~~LS~l  106 (118)
T d1tuza_          68 RHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLL  106 (118)
T ss_dssp             HHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccccccccccCCCceeeHHHHHHHHHHH
Confidence            3457789999999976        889999999988765

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.88  E-value=0.23  Score=25.86  Aligned_cols=45  Identities=20%  Similarity=0.183  Sum_probs=34.8

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHHHHh-CC-CCCHHHHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAMRAL-GF-EMTEEHGIVLVCTI   85 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-g~-~~~~~ei~~li~~~   85 (87)
                      .++..+|..|-.+ .+.++.++|...|... +. ..+.+.+..+|...
T Consensus         8 ~ei~~if~~ys~~-~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~   54 (94)
T d1qasa1           8 AEIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERY   54 (94)
T ss_dssp             HHHHHHHHHHHTT-SSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCC-CCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHH
Confidence            4678889888544 4689999999999985 43 47888888888753

>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: DNA-binding protein SATB2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.47  E-value=0.39  Score=23.82  Aligned_cols=47  Identities=9%  Similarity=0.010  Sum_probs=37.7

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|..+|...+    -+.+.++...+-..+|  ++...|..+|+.
T Consensus        12 ~~~t~~Q~~~Le~~F~~~~----~~P~~~~~~~La~~lg--l~~~qV~~WFqN   58 (71)
T d1wi3a_          12 TKISLEALGILQSFIHDVG----LYPDQEAIHTLSAQLD--LPKHTIIKFFQN   58 (71)
T ss_dssp             CCCCSHHHHHHHHHHHHHC----SCCCHHHHHHHHHHSC--CCHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHhc----CCCCHHHHHHHHHHhC--CCHHHHHHHhHh
Confidence            5789999999999997543    3688888888888887  677888888764

>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: alpha-Actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.66  E-value=0.33  Score=24.56  Aligned_cols=39  Identities=13%  Similarity=0.233  Sum_probs=28.9

Q ss_pred             HHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           38 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      .-+++..+|+.+ .++..+|+..||+..       ++.++++-+++.
T Consensus         6 TaEqv~~aFr~l-A~~KpyVT~~dL~~~-------L~peqaeyc~~~   44 (73)
T d1h8ba_           6 TAEQVIASFRIL-ASDKPYILAEELRRE-------LPPDQAQYCIKR   44 (73)
T ss_dssp             THHHHHHHHHHH-TTSCSSBCHHHHHHH-------SCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHH-hCCCCeeCHHHHHhh-------cCHHHHHHHHHH
Confidence            356789999999 456789999999864       356667666554

>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Homeobox protein prh
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.10  E-value=0.48  Score=22.50  Aligned_cols=46  Identities=15%  Similarity=0.185  Sum_probs=38.0

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|...|..     +.+.+..+...+-..+|  ++...|..+|+.
T Consensus         5 ~~ft~~Q~~~Le~~F~~-----n~yp~~~~r~~LA~~l~--L~~~qV~~WFqN   50 (57)
T d2e1oa1           5 VRFSNDQTIELEKKFET-----QKYLSPPERKRLAKMLQ--LSERQVKTWFQN   50 (57)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHTT--CCHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHh-----CCCCCHHHHHHHHHHhC--CCHHHhhHhhhh
Confidence            56899999999999973     46899999988888887  588888887753

>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Homeobox protein hox-a9
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.88  E-value=0.63  Score=23.53  Aligned_cols=46  Identities=13%  Similarity=0.164  Sum_probs=38.2

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|...|..     +-+.+..+...+-..+|  ++...|..+|+.
T Consensus        18 t~ft~~Ql~~Le~~F~~-----~~yPs~~~r~~LA~~l~--l~~~qV~iWFqN   63 (77)
T d1pufa_          18 CPYTKHQTLELEKEFLF-----NMYLTRDRRYEVARLLN--LTERQVKIWFQN   63 (77)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHHT--CCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHhC--CCHHHhhhhhhh
Confidence            67999999999999985     45899988888888887  678888877763

>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Homeobox protein hox-b13
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.86  E-value=0.52  Score=22.54  Aligned_cols=46  Identities=11%  Similarity=0.109  Sum_probs=38.6

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.++++.|...|..     +.+.+.++...+-..+|  ++...|..+|+.
T Consensus         6 t~ft~~Q~~~Le~~F~~-----~~yp~~~~r~~LA~~l~--l~~~qV~vWFqN   51 (58)
T d2craa1           6 IPYSKGQLRELEREYAA-----NKFITKDKRRKISAATS--LSERQITIWFQN   51 (58)
T ss_dssp             CCSCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHTC--CCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhh-----cCCCCHHHHHHHHHHcC--CCHHHeeecccc
Confidence            46899999999999985     46899999998888887  688888888764

>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster [TaxId: 7227]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Engrailed Homeodomain
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.50  E-value=0.51  Score=22.00  Aligned_cols=46  Identities=13%  Similarity=0.206  Sum_probs=38.3

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|...|..     +-+.+..+...+-..+|  ++...|..+|+.
T Consensus         4 t~ft~~Q~~~Le~~F~~-----~~yp~~~~r~~LA~~lg--L~~~qV~vWFqN   49 (53)
T d1p7ia_           4 TAFSSEQLARLKREFNE-----NRYLTERRRQQLSSELG--LNEAQIKIWFQN   49 (53)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHHT--CCHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHhC--CChHHhhhcccc
Confidence            46899999999999974     46899999999888888  688888887763

>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Hepatocyte nuclear factor 6
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.46  E-value=0.49  Score=21.72  Aligned_cols=46  Identities=7%  Similarity=0.063  Sum_probs=36.7

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.++...|..+|.     .+-+.+.++...+-..+|  ++...|...++.
T Consensus         3 t~ft~~Q~~~Le~~F~-----~n~~P~~~~~~~LA~~l~--l~~~~V~~WFqN   48 (50)
T d1s7ea1           3 LVFTDVQRRTLHAIFK-----ENKRPSKELQITISQQLG--LELSTVSNFFMN   48 (50)
T ss_dssp             SCCCHHHHHHHHHHTT-----SSCSSTHHHHHHHHTTSC--SSSHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHH-----HCCCCCHHHHHHHHHHHC--cCHHHhhhcCCc
Confidence            4688999999999996     345899999998888887  566778777653

>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: VND/NK-2 protein
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.41  E-value=0.69  Score=23.33  Aligned_cols=46  Identities=11%  Similarity=0.102  Sum_probs=38.8

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|..+|..     +-+.+..+...+-..+|  ++...|..+|+.
T Consensus        14 t~ft~~Q~~~Le~~F~~-----~~yP~~~~r~~LA~~l~--l~~~qV~~WFqN   59 (77)
T d1vnda_          14 VLFTKAQTYELERRFRQ-----QRYLSAPEREHLASLIR--LTPTQVKIWFQN   59 (77)
T ss_dssp             CCCCTTHHHHHHHHHHH-----CSCCCHHHHHHHHHHHT--CCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHhC--CChhhhhhcchh
Confidence            56899999999999985     46899999998888887  588888888764

>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: ZF-HD homeobox protein At4g24660
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.08  E-value=0.75  Score=23.32  Aligned_cols=52  Identities=8%  Similarity=0.003  Sum_probs=38.7

Q ss_pred             cCCCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           30 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        30 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ....++.++++.|+..|...-... -+-+.+++..+...+|  ++...|..+|+.
T Consensus        20 ~Rt~ft~~Q~~~L~~~fe~~~~~~-~~p~~~~~~~la~~~g--l~~~~i~vWFqN   71 (80)
T d1wh7a_          20 FRTKFTAEQKEKMLAFAERLGWRI-QKHDDVAVEQFCAETG--VRRQVLKIWMHN   71 (80)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHTSCC-CSSTTHHHHHHHHHSC--CCHHHHHHHHHT
T ss_pred             ccccCCHHHHHHHHHHHHHhcccc-cCcCHHHHHHHHHHHC--CCHHHeeeeccc
Confidence            346799999999999998754322 2456788888888887  577788877753

>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Even-skipped homeodomain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.07  E-value=0.59  Score=22.14  Aligned_cols=46  Identities=9%  Similarity=0.077  Sum_probs=37.8

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.++++.|..+|..     +-+.+..+...+-..+|  ++...|..+|+.
T Consensus         4 t~fT~~Ql~~Le~~F~~-----~~yp~~~~r~~LA~~lg--l~~~qV~vWFqN   49 (57)
T d1jgga_           4 TAFTRDQLGRLEKEFYK-----ENYVSRPRRCELAAQLN--LPESTIKVWFQN   49 (57)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSCCCHHHHHHHHHHHT--SCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHhC--CChhHhhhcchh
Confidence            45899999999999984     45789999988888887  688888887763

>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Paired protein
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.04  E-value=0.78  Score=22.28  Aligned_cols=46  Identities=20%  Similarity=0.136  Sum_probs=37.9

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|..+|..     +-+.+..+...+-..+|  ++...|..+|+.
T Consensus         7 t~ft~~Q~~~Le~~F~~-----n~yPs~~~r~~LA~~lg--l~~~~V~~WFqN   52 (65)
T d1fjla_           7 TTFSASQLDELERAFER-----TQYPDIYTREELAQRTN--LTEARIQVWFQN   52 (65)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHHT--CCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH-----cCCCChHHHHHHHHHhC--CCHHHhhHhhhh
Confidence            56899999999999984     35899999998888887  577888887764

>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Msx-1 homeodomain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.92  E-value=0.73  Score=21.82  Aligned_cols=46  Identities=11%  Similarity=0.106  Sum_probs=38.0

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|...|..     +-+++..+...+-..+|  ++...|..+|+.
T Consensus         5 t~ft~~Ql~~Le~~F~~-----~~yP~~~~r~~LA~~l~--l~~~~V~~WFqN   50 (58)
T d1ig7a_           5 TPFTTAQLLALERKFRQ-----KQYLSIAERAEFSSSLS--LTETQVKIWFQN   50 (58)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSCCCHHHHHHHHHHTT--CCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHhC--CChhheeecCcc
Confidence            46899999999999985     46899999988888887  678888877753

>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Mating type protein A1 Homeodomain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.59  E-value=0.73  Score=21.44  Aligned_cols=46  Identities=17%  Similarity=0.244  Sum_probs=37.7

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..+++++...|...|..     +-+.+..+...+...+|  ++...|..+|+.
T Consensus         2 t~~s~~q~~~Le~~F~~-----~~~P~~~~~~~LA~~lg--l~~~qV~~WFqN   47 (53)
T d1le8a_           2 SSISPQARAFLEQVFRR-----KQSLNSKEKEEVAKKCG--ITPLQVRVWFIN   47 (53)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSCCCHHHHHHHHHHTT--SCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHC--CCHHHHHHHHHh
Confidence            46899999999999974     35799999999999887  577788887764

>d1eg3a2 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Dystrophin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.02  E-value=0.74  Score=24.46  Aligned_cols=29  Identities=14%  Similarity=0.347  Sum_probs=24.8

Q ss_pred             HHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 048414           39 KQEIKEAFELFDTDGSGTIDAKELNVAMRA   68 (87)
Q Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~   68 (87)
                      .++++-+|+.+ .|++|.++..-|..+|+.
T Consensus         3 ~dKyRYlF~qi-sd~~g~~~~~kl~~lL~d   31 (97)
T d1eg3a2           3 EDKYRYLFKQV-ASSTGFCDQRRLGLLLHD   31 (97)
T ss_dssp             HHHHHHHHHHH-SCTTSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-hCCCCCCcHHHHHHHHHH
Confidence            47899999999 788999999988887764

>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Pit-1 POU homeodomain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.73  E-value=1  Score=21.30  Aligned_cols=46  Identities=17%  Similarity=0.242  Sum_probs=38.4

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.++.+.|...|..     +.+.+..+...+...+|  ++...|...|+.
T Consensus         4 t~~s~~q~~~Le~~F~~-----~~~P~~~~~~~La~~l~--l~~~~V~~WFqN   49 (58)
T d1au7a1           4 TTISIAAKDALERHFGE-----HSKPSSQEIMRMAEELN--LEKEVVRVWFCN   49 (58)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHHT--CCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH-----ccCCCHHHHHHHHHHhC--CCHHHHHHHHHH
Confidence            46889999999999974     46899999999988887  578888888764

>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Homeotic bicoid protein
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.52  E-value=1.2  Score=21.76  Aligned_cols=46  Identities=11%  Similarity=0.108  Sum_probs=38.4

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|...|..     +.+++..+...+-..+|  ++...|..+|+.
T Consensus         6 t~ft~~Ql~~Le~~F~~-----~~yp~~~~r~~LA~~l~--l~~~~V~iWFqN   51 (67)
T d1zq3p1           6 TTFTSSQIAELEQHFLQ-----GRYLTAPRLADLSAKLA--LGTAQVKIWFKN   51 (67)
T ss_dssp             CCCCHHHHHHHHHHHTT-----CSSCCHHHHHHHHHHHT--SCHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHhC--CCccceeecccc
Confidence            56899999999999974     57999999998888887  677788877753

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.21  E-value=0.39  Score=27.61  Aligned_cols=27  Identities=22%  Similarity=0.183  Sum_probs=20.6

Q ss_pred             HHHHHHhhhhCCCCCCcccHHHHHHHH
Q 048414           40 QEIKEAFELFDTDGSGTIDAKELNVAM   66 (87)
Q Consensus        40 ~~l~~~F~~~D~d~~G~I~~~el~~~l   66 (87)
                      ..++.-|+..|.|+||.|+..|...+|
T Consensus       112 ~C~~~F~~~CD~n~D~~Is~~EW~~Cf  138 (151)
T d1sraa_         112 HCTTRFFETCDLDNDKYIALDEWAGCF  138 (151)
T ss_dssp             GGHHHHHHHHCTTCSSSEEHHHHHHHT
T ss_pred             hHHHHHHHHhcCCCCCcCCHHHHHHHc
Confidence            346667777888888888888888776

>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Homeobox-leucine zipper protein Homez
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.93  E-value=1.5  Score=21.76  Aligned_cols=46  Identities=9%  Similarity=0.027  Sum_probs=37.9

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|...|..     +-+.+.+++..+-..+|  ++...|..+|+.
T Consensus         8 ~r~T~eQ~~~Le~~F~~-----n~~Ps~~~~~~La~~~g--L~~~qV~~WF~N   53 (76)
T d2ecca1           8 KRKTKEQLAILKSFFLQ-----CQWARREDYQKLEQITG--LPRPEIIQWFGD   53 (76)
T ss_dssp             CCCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHTC--CCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH-----cCCCCHHHHHHHHHHHc--cCHHHHHHHHHH
Confidence            45789999999999975     35899999999888887  578888888764

>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Homeodomain-only protein, Hop
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.73  E-value=1.6  Score=21.70  Aligned_cols=47  Identities=15%  Similarity=0.183  Sum_probs=35.8

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..|+.++++.|...|...    +.+.+..+...+-..+|  +++..|..+|+.
T Consensus         6 ~~fT~~Ql~~Le~~F~~~----n~yP~~~~r~~LA~~lg--L~~~~VqvWFqN   52 (72)
T d1uhsa_           6 ATMTEDQVEILEYNFNKV----NKHPDPTTLCLIAAEAG--LTEEQTQKWFKQ   52 (72)
T ss_dssp             CCCCHHHHHHHHHHHHSS----CSSCCHHHHHHHHHHHT--CCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHc----cccCCHHHHHHHHHHhC--CCHHHHHHHHHH
Confidence            578999999999999643    23567777777777776  578888888764

>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Pituitary homeobox 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.58  E-value=1.1  Score=21.22  Aligned_cols=46  Identities=15%  Similarity=0.090  Sum_probs=35.4

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|...|..     +-+.+..+...+...+|  ++...|...|+.
T Consensus         6 t~ft~~Q~~~Le~~F~~-----~~yP~~~~r~~LA~~l~--l~~~~V~~WFqN   51 (60)
T d1yz8p1           6 THFTSQQLQQLEATFQR-----NRYPDMSTREEIAVWTN--LTEARVRVWFKN   51 (60)
T ss_dssp             CCCCHHHHHHHHHHHTT-----CSSCCTTTTTHHHHHTT--SCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH-----cCCCChHHHHHHHHHHC--CChHHHHHHhHH
Confidence            46899999999999973     44677777777777776  677888877754

>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila melanogaster [TaxId: 7227]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Antennapedia Homeodomain
species: Drosophila melanogaster [TaxId: 7227]

Probab=82.50  E-value=1.5  Score=20.66  Aligned_cols=46  Identities=13%  Similarity=0.193  Sum_probs=37.4

Q ss_pred             CCCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           32 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        32 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..++.+++..|...|..     +-+++..+...+-..+|  ++...|..+|+.
T Consensus         2 t~ft~~Q~~~Le~~F~~-----~~yp~~~~r~~LA~~l~--l~~~~V~iWFQN   47 (56)
T d9anta_           2 QTYTRYQTLELEKEFHF-----NRYLTRRRRIEIAHALS--LTERQIKIWFQN   47 (56)
T ss_dssp             CCCCHHHHHHHHHHHTT-----CSSCCHHHHHHHHHHHT--CCHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHHHh-----CCCCCHHHHHHHHHHhC--CChhHeeecccc
Confidence            35789999999999963     56899999988888887  678888887763

>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Zinc fingers and homeoboxes protein 1, ZHX1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.18  E-value=1.8  Score=21.45  Aligned_cols=45  Identities=13%  Similarity=0.094  Sum_probs=37.1

Q ss_pred             CCCHHHHHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEHGIVLVCT   84 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~ei~~li~~   84 (87)
                      ..+.+++..|...|..     +-+.+..+...+-..+|  ++...|..+|+.
T Consensus        10 ~~T~~Q~~~Le~~F~~-----~~~P~~~~r~~LA~~l~--l~~~~V~~WFqN   54 (76)
T d2ecba1          10 EKTAEQLRVLQASFLN-----SSVLTDEELNRLRAQTK--LTRREIDAWFTE   54 (76)
T ss_dssp             CCCHHHHHHHHHHHHH-----CSSCCHHHHHHHHHHTC--CCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHhC--CCHHHHHHhHHH
Confidence            4588999999999985     35899999998888887  678888888764

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.78  E-value=0.66  Score=25.19  Aligned_cols=53  Identities=11%  Similarity=0.103  Sum_probs=35.5

Q ss_pred             CCCHHHHHHHHHHhhhhC---CCCCCcccHHHHHHHHHHhCC-C-CCHHHHHHHHHHH
Q 048414           33 GLSQQKKQEIKEAFELFD---TDGSGTIDAKELNVAMRALGF-E-MTEEHGIVLVCTI   85 (87)
Q Consensus        33 ~~~~~~~~~l~~~F~~~D---~d~~G~I~~~el~~~l~~lg~-~-~~~~ei~~li~~~   85 (87)
                      +++..+++.|.+.|+...   ...+|.|+.++++.++..+.. . .+..-++.|+...
T Consensus        21 ~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~F   78 (118)
T d1tuza_          21 EYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSF   78 (118)
T ss_dssp             HHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHH
Confidence            456666777777775432   245799999999999987633 2 3455667776643