Citrus Sinensis ID: 048475

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-----
MDTLCTVAECNECDFSKLSEKPRSLNMDRERQRSFDERSLSELSIGFSPRVMTRSADNANANANANANFSRLVIDHNPDAPFSPGRRSGFNTPRSLIGYEPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQLKPLLRRSHSWTF
ccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEccccccccEEcccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccccEEECcccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHcccccccccHHHHHHHccccccEEcccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccEEccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccHHHcccccccc
****CTVAECNECDFSKLSEKPRSLNMDRE****F*****************************************************************PHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQLKPLLR****W**
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MDTLCTVAECNECDFSKLSEKPRSLNMDRERQRSFDERSLSELSIGFSPRVMTRSADNANANANANANFSRLVIDHNPDAPFSPGRRSGFNTPRSLIGYEPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQLKPLLRRSHSWTF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfer were detected in SWISS-PROT

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3RRS, chain A
Confidence level:confident
Coverage over the Query: 142-174,185-337,349-350,369-538
View the alignment between query and template
View the model in PyMOL
Template: 2FBA, chain A
Confidence level:confident
Coverage over the Query: 108-332
View the alignment between query and template
View the model in PyMOL
Template: 1ULV, chain A
Confidence level:confident
Coverage over the Query: 139-338,349-358,370-426,437-549
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
3c68, chain Aconfident Alignment | Template Structure