Citrus Sinensis ID: 048475

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-----
MDTLCTVAECNECDFSKLSEKPRSLNMDRERQRSFDERSLSELSIGFSPRVMTRSADNANANANANANFSRLVIDHNPDAPFSPGRRSGFNTPRSLIGYEPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQLKPLLRRSHSWTF
ccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEccccccccEEcccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHcccccccHHHHHHHHccccccEEcccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccEEccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccHHHHHccccccc
ccccccHcccccccHHHHHcccccccccEEEEccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHEEccccEEEEEEcccccccccccHHHHHcHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEcccccccEEcccccHcHEEEcccccHHHHHHHHHHHHHHHcccHHHHccHHHHHHHHHHHHHHHccccccccEEEccccccHccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcEEcHHHHHHHHccccHHcccHHHcccccccccccHHHHHHccccccEEEEccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccEccHHHHHHHHHHHHHHHHHHHHHHccHHccEEEccccHccccHHcccccccc
mdtlctvaecnecdfsklsekprslnmdrerqrsfderslselsigfsprvmtrsadnananananANFSRLvidhnpdapfspgrrsgfntprsligyephpmvgEAWDALRRSLVYfrgkpvgtiaaldsseeelnydqvfvRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDrfqlgegvmpasfkvlhdpirntETLIADfgesaigrvapvdsgFWWIILLRAYTkstgdsslaelpecqKGMRLILSLCLsegfdtfptllcadgccMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIyrykteeyshtavnkfnvipdslpewvfdfmpirggyfignvspakmdFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELvgempikvcypaieshdwriitgcdpkntrwsyhnggswpvesampsfwpadqNLQLLLHTIDVSLSYKFKIPFIKRAIELAESRllkdswpeyydgklgryIGKQARKFQTWSIAGYLVAKMmledpshlgmisleedkqlkpllrrshswtf
mdtlctvaecnecdfsklsekprslnmdrerqrsfderslselsigfsPRVMTRSADNANANANANANFSRLVIDHNPDAPFSPGRRSGFNTPRSLIGYEPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELAEsrllkdswpeyyDGKLGRYIGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLeedkqlkpllrrshswtf
MDTLCTVAECNECDFSKLSEKPRSLNMDRERQRSFDERSLSELSIGFSPRVMTRSadnanananananFSRLVIDHNPDAPFSPGRRSGFNTPRSLIGYEPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQLKPLLRRSHSWTF
****CTVAECN************************************************************************************LIGYEPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLED***************************
********ECNECDFSKLSEKPRSLNMDRE****F************************************************************************AWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQLKPLLR****W**
MDTLCTVAECNECDFSKLSEKPRSLNMDRERQRSFDERSLSELSIGFSPRVMTRSADNANANANANANFSRLVIDHNPDAPFSPGRRSGFNTPRSLIGYEPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQLKPLLRRSHSWTF
***LCTVAECNECDFSKLSEKPRSLNMDRERQRSFDER*L************************************************************PHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQLKPLLRR*HS***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDTLCTVAECNECDFSKLSEKPRSLNMDRERQRSFDERSLSELSIGFSPRVMTRSADNANANANANANFSRLVIDHNPDAPFSPGRRSGFNTPRSLIGYEPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQLKPLLRRSHSWTF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query575
449454175572 PREDICTED: uncharacterized protein LOC10 0.942 0.947 0.788 0.0
225427896572 PREDICTED: uncharacterized protein LOC10 0.947 0.952 0.776 0.0
163913878573 putative neutral invertase [Vitis vinife 0.947 0.951 0.775 0.0
163913876573 putative neutral invertase [Vitis vinife 0.947 0.951 0.775 0.0
384371328574 neutral/alkaline invertase [Manihot escu 0.946 0.947 0.772 0.0
224080572573 predicted protein [Populus trichocarpa] 0.944 0.947 0.762 0.0
224103249574 predicted protein [Populus trichocarpa] 0.944 0.945 0.760 0.0
297798434571 hypothetical protein ARALYDRAFT_491170 [ 0.939 0.945 0.761 0.0
15236209571 neutral invertase-like protein [Arabidop 0.939 0.945 0.759 0.0
222424455571 AT4G34860 [Arabidopsis thaliana] 0.939 0.945 0.757 0.0
>gi|449454175|ref|XP_004144831.1| PREDICTED: uncharacterized protein LOC101204549 [Cucumis sativus] gi|449507015|ref|XP_004162910.1| PREDICTED: uncharacterized protein LOC101223419 [Cucumis sativus] Back     alignment and taxonomy information
 Score =  936 bits (2420), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/585 (78%), Positives = 500/585 (85%), Gaps = 43/585 (7%)

Query: 2   DTLCTVAECNECDFSKLSEKPRSLNMDRERQRSFDERSLSELSIGFSPRVMTRSADNANA 61
           DTL TV E  E +FSKL ++PR LNM  ERQRSFDERSL +L+IGFSPR+ +R +     
Sbjct: 18  DTLFTVDEIEESEFSKLLDRPRPLNM--ERQRSFDERSLGDLAIGFSPRLSSRVS----- 70

Query: 62  NANANANFSRLV--IDHNPDAPFSPGRRSGFNTPRSLIGYEPHPMVGEAWDALRRSLVYF 119
               + NF RL    DH+P    SPGR+S FNTPRS  G+E HPMV EAW+ALRRSLVYF
Sbjct: 71  ----SENFGRLSDNYDHSP----SPGRKSDFNTPRSHTGFEQHPMVAEAWEALRRSLVYF 122

Query: 120 RGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKK 179
           RG+PVGTIAALDS+EE LNYDQVFVRDFVPSA AFLMNGEPEIVKNFILKTLRLQSWEKK
Sbjct: 123 RGQPVGTIAALDSTEENLNYDQVFVRDFVPSAFAFLMNGEPEIVKNFILKTLRLQSWEKK 182

Query: 180 IDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKST 239
           IDRFQLGEGVMPASFKVLHDP+RNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKST
Sbjct: 183 IDRFQLGEGVMPASFKVLHDPVRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKST 242

Query: 240 GDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRM----------ALFF 289
           GDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRM          ALFF
Sbjct: 243 GDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFF 302

Query: 290 MALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTA 349
           MALRCAL+LLKQD EGK+FVERI KRLHA++YHMR+YFW+DLKQLNDIYRYKTEEYSHTA
Sbjct: 303 MALRCALILLKQDHEGKDFVERITKRLHAMSYHMRTYFWIDLKQLNDIYRYKTEEYSHTA 362

Query: 350 VNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNA 409
           +NKFNVIPDSLPEW+FDFMP RGGYFIGNVSPA+MDFRWF LGNCIAILS+LAT EQ+ A
Sbjct: 363 LNKFNVIPDSLPEWIFDFMPTRGGYFIGNVSPARMDFRWFCLGNCIAILSALATPEQATA 422

Query: 410 IMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSF 469
           IMDLIESRWEELVGEMP+KVCYPAIESH+WRI+TGCDPKNTRWSYHNGGSWPV       
Sbjct: 423 IMDLIESRWEELVGEMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPV------- 475

Query: 470 WPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELAESRLLKDSWPEYYDGKLGRYIGKQAR 529
                    LL  +  +     +    +RA+ELAESRLLKDSWPEYYDG LGRYIGKQAR
Sbjct: 476 ---------LLWLLTAACIKTGRPQIARRALELAESRLLKDSWPEYYDGTLGRYIGKQAR 526

Query: 530 KFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQLKPLLRRSHSWT 574
           KFQTWSIAGYLVAKMMLEDPSH GM+SLEEDKQ+KPL++RSHSWT
Sbjct: 527 KFQTWSIAGYLVAKMMLEDPSHSGMVSLEEDKQMKPLMKRSHSWT 571

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225427896|ref|XP_002276670.1| PREDICTED: uncharacterized protein LOC100253759 [Vitis vinifera] Back     alignment and taxonomy information
>gi|163913878|emb|CAP59642.1| putative neutral invertase [Vitis vinifera] Back     alignment and taxonomy information
>gi|163913876|emb|CAP59641.1| putative neutral invertase [Vitis vinifera] Back     alignment and taxonomy information
>gi|384371328|gb|AFH77953.1| neutral/alkaline invertase [Manihot esculenta] Back     alignment and taxonomy information
>gi|224080572|ref|XP_002306166.1| predicted protein [Populus trichocarpa] gi|222849130|gb|EEE86677.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224103249|ref|XP_002312983.1| predicted protein [Populus trichocarpa] gi|222849391|gb|EEE86938.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297798434|ref|XP_002867101.1| hypothetical protein ARALYDRAFT_491170 [Arabidopsis lyrata subsp. lyrata] gi|297312937|gb|EFH43360.1| hypothetical protein ARALYDRAFT_491170 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15236209|ref|NP_195212.1| neutral invertase-like protein [Arabidopsis thaliana] gi|79326306|ref|NP_001031790.1| neutral invertase-like protein [Arabidopsis thaliana] gi|5123703|emb|CAB45447.1| invertase-like protein [Arabidopsis thaliana] gi|7270437|emb|CAB80203.1| invertase-like protein [Arabidopsis thaliana] gi|15215776|gb|AAK91433.1| AT4g34860/F11I11_100 [Arabidopsis thaliana] gi|27363384|gb|AAO11611.1| At4g34860/F11I11_100 [Arabidopsis thaliana] gi|332661029|gb|AEE86429.1| neutral invertase-like protein [Arabidopsis thaliana] gi|332661030|gb|AEE86430.1| neutral invertase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|222424455|dbj|BAH20183.1| AT4G34860 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query575
TAIR|locus:2116870571 A/N-InvB "alkaline/neutral inv 0.937 0.943 0.761 3.5e-233
TAIR|locus:2133737558 CINV2 "cytosolic invertase 2" 0.918 0.946 0.699 3.1e-218
TAIR|locus:2199690534 A/N-InvD "alkaline/neutral inv 0.841 0.906 0.753 1.9e-214
TAIR|locus:2014676551 CINV1 "cytosolic invertase 1" 0.907 0.947 0.666 1.7e-213
TAIR|locus:2016064499 A/N-InvF "alkaline/neutral inv 0.834 0.961 0.740 2.7e-203
TAIR|locus:2171112617 INV-E "alkaline/neutral invert 0.768 0.716 0.556 2.7e-139
TAIR|locus:2027600616 A/N-InvA "alkaline/neutral inv 0.766 0.715 0.532 4.2e-134
TAIR|locus:2084329664 A/N-InvC "alkaline/neutral inv 0.766 0.664 0.534 8.8e-134
TAIR|locus:2074434659 INVH "invertase H" [Arabidopsi 0.766 0.669 0.517 6.8e-127
TAIR|locus:2116870 A/N-InvB "alkaline/neutral invertase B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2249 (796.7 bits), Expect = 3.5e-233, P = 3.5e-233
 Identities = 447/587 (76%), Positives = 493/587 (83%)

Query:     1 MDTLCTVAECNECDFSKLSEKPRSLNMDRERQRSFDERSLSELSIGFSPRVMTRSXXXXX 60
             +D+L T+ + ++ DF+KL EKPR LN+DR   RS DERSL+EL+ G SP++         
Sbjct:    19 VDSLSTLDDIDDIDFAKLLEKPRPLNIDR--LRSLDERSLTELT-G-SPQLRNADNA--- 71

Query:    61 XXXXXXXXFSRLVIDHNPDAPFSP--GRRSGFNTPRSLIGYEPHPMVGEAWDALRRSLVY 118
                      SR   DH  D   SP  GRRSGFNTPRS  G+E HPMVGEAWDALRRS+VY
Sbjct:    72 ---------SRAP-DH-ADYVISPSFGRRSGFNTPRSQPGFESHPMVGEAWDALRRSMVY 120

Query:   119 FRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEK 178
             FRG+PVGTIAA+D+SEE+LNYDQVFVRDFVPSALAFLMNGEP+IVKNF+LKTLRLQSWEK
Sbjct:   121 FRGQPVGTIAAVDNSEEKLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLRLQSWEK 180

Query:   179 KIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKS 238
             KIDRFQLGEGVMPASFKV HDP+RN ETLIADFGESAIGRVAPVDSGFWWIILLRAYTKS
Sbjct:   181 KIDRFQLGEGVMPASFKVFHDPVRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKS 240

Query:   239 TGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRM----------ALF 288
             TGDSSLA++PECQKG+RLILSLCLSEGFDTFPTLLCADGCCMIDRRM          ALF
Sbjct:   241 TGDSSLADMPECQKGIRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALF 300

Query:   289 FMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHT 348
             FMALRCAL+LLK D EGKE VE+IVKRLHAL+YHMRSYFWLDLKQLNDIYRYKTEEYSHT
Sbjct:   301 FMALRCALLLLKHDGEGKEMVEQIVKRLHALSYHMRSYFWLDLKQLNDIYRYKTEEYSHT 360

Query:   349 AVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSN 408
             AVNKFNVIPDSLPEWVFDFMP  GG+FIGNVSPA+MDFRWFALGNCIAILSSLAT EQS 
Sbjct:   361 AVNKFNVIPDSLPEWVFDFMPPHGGFFIGNVSPARMDFRWFALGNCIAILSSLATPEQST 420

Query:   409 AIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPS 468
             AIMDLIESRWEELVGEMP+KVCYPAIESH+WRI+TGCDPKNTRWSYHNGGSWPV      
Sbjct:   421 AIMDLIESRWEELVGEMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPV-----L 475

Query:   469 FWPADQNLQLLLHTIDVSLSYKFKIPFI-KRAIELAESRLLKDSWPEYYDGKLGRYIGKQ 527
              W       LL      +   K   P I +RAIE+AE+RL KD WPEYYDGK+GRY+GKQ
Sbjct:   476 LW-------LL-----TAACIKTGRPQIARRAIEVAEARLHKDHWPEYYDGKVGRYVGKQ 523

Query:   528 ARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQLKPLLRRSHSWT 574
             +RK QTWS+AGYLVAKMMLEDPSH+GM+ LEEDKQ+KP++RRS+SWT
Sbjct:   524 SRKNQTWSVAGYLVAKMMLEDPSHVGMVCLEEDKQMKPVMRRSNSWT 570
GO:0003824 "catalytic activity" evidence=IEA
GO:0004564 "beta-fructofuranosidase activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2133737 CINV2 "cytosolic invertase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2199690 A/N-InvD "alkaline/neutral invertase D" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014676 CINV1 "cytosolic invertase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016064 A/N-InvF "alkaline/neutral invertase F" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171112 INV-E "alkaline/neutral invertase E" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027600 A/N-InvA "alkaline/neutral invertase A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084329 A/N-InvC "alkaline/neutral invertase C" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074434 INVH "invertase H" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query575
PLN02973571 PLN02973, PLN02973, beta-fructofuranosidase 0.0
PLN03005550 PLN03005, PLN03005, beta-fructofuranosidase 0.0
pfam12899437 pfam12899, Glyco_hydro_100, Alkaline and neutral i 0.0
PLN02703618 PLN02703, PLN02703, beta-fructofuranosidase 0.0
>gnl|CDD|178556 PLN02973, PLN02973, beta-fructofuranosidase Back     alignment and domain information 
 Score =  909 bits (2351), Expect = 0.0
 Identities = 445/586 (75%), Positives = 495/586 (84%), Gaps = 46/586 (7%)

Query: 1   MDTLCTVAECNECDFSKLSEKPRSLNMDRERQRSFDERSLSELSIGFSPRVMTRSADNAN 60
           +D+L T+ + ++ DF+KL EKPR LN+DR   RS DERSL+EL+   SP++  R+ADNA+
Sbjct: 19  VDSLSTLDDIDDIDFAKLLEKPRPLNIDR--LRSLDERSLTELT--GSPQL--RNADNAS 72

Query: 61  ANANANANFSRLVIDHNPDAPFSP--GRRSGFNTPRSLIGYEPHPMVGEAWDALRRSLVY 118
                         DH  D   SP  GRRSGFNTPRS  G+E HPMVGEAWDALRRS+VY
Sbjct: 73  RAP-----------DH-ADYVISPSFGRRSGFNTPRSQPGFESHPMVGEAWDALRRSMVY 120

Query: 119 FRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEK 178
           FRG+PVGTIAA+D+SEE+LNYDQVFVRDFVPSALAFLMNGEP+IVKNF+LKTLRLQSWEK
Sbjct: 121 FRGQPVGTIAAVDNSEEKLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLRLQSWEK 180

Query: 179 KIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKS 238
           KIDRFQLGEGVMPASFKV HDP+RN ETLIADFGESAIGRVAPVDSGFWWIILLRAYTKS
Sbjct: 181 KIDRFQLGEGVMPASFKVFHDPVRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKS 240

Query: 239 TGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRM----------ALF 288
           TGDSSLA++PECQKG+RLILSLCLSEGFDTFPTLLCADGCCMIDRRM          ALF
Sbjct: 241 TGDSSLADMPECQKGIRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALF 300

Query: 289 FMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHT 348
           FMALRCAL+LLK D EGKE VE+IVKRLHAL+YHMRSYFWLDLKQLNDIYRYKTEEYSHT
Sbjct: 301 FMALRCALLLLKHDGEGKEMVEQIVKRLHALSYHMRSYFWLDLKQLNDIYRYKTEEYSHT 360

Query: 349 AVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSN 408
           AVNKFNVIPDSLPEWVFDFMP  GG+FIGNVSPA+MDFRWFALGNCIAILSSLAT EQS 
Sbjct: 361 AVNKFNVIPDSLPEWVFDFMPPHGGFFIGNVSPARMDFRWFALGNCIAILSSLATPEQST 420

Query: 409 AIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPS 468
           AIMDLIESRWEELVGEMP+KVCYPAIESH+WRI+TGCDPKNTRWSYHNGGSWPV      
Sbjct: 421 AIMDLIESRWEELVGEMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPV------ 474

Query: 469 FWPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELAESRLLKDSWPEYYDGKLGRYIGKQA 528
                     LL  +  +     +    +RAIE+AE+RL KD WPEYYDGK+GRY+GKQ+
Sbjct: 475 ----------LLWLLTAACIKTGRPQIARRAIEVAEARLHKDHWPEYYDGKVGRYVGKQS 524

Query: 529 RKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQLKPLLRRSHSWT 574
           RK QTWS+AGYLVAKMMLEDPSH+GM+ LEEDKQ+KP++RRS+SWT
Sbjct: 525 RKNQTWSVAGYLVAKMMLEDPSHVGMVCLEEDKQMKPVMRRSNSWT 570

Length = 571
>gnl|CDD|178582 PLN03005, PLN03005, beta-fructofuranosidase Back     alignment and domain information
>gnl|CDD|221840 pfam12899, Glyco_hydro_100, Alkaline and neutral invertase Back     alignment and domain information
>gnl|CDD|178306 PLN02703, PLN02703, beta-fructofuranosidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 575
PLN02973571 beta-fructofuranosidase 100.0
PLN03005550 beta-fructofuranosidase 100.0
PF12899436 Glyco_hydro_100: Alkaline and neutral invertase; I 100.0
PLN02703618 beta-fructofuranosidase 100.0
PF06202370 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR 100.0
COG3408641 GDB1 Glycogen debranching enzyme [Carbohydrate tra 100.0
TIGR01561575 gde_arch glycogen debranching enzyme, archaeal typ 100.0
TIGR015311464 glyc_debranch glycogen debranching enzymye. glycog 100.0
PRK10137786 alpha-glucosidase; Provisional 100.0
TIGR01577616 oligosac_amyl oligosaccharide amylase. The name of 99.81
PLN02567554 alpha,alpha-trehalase 99.69
KOG36251521 consensus Alpha amylase [Carbohydrate transport an 99.66
PRK13271569 treA trehalase; Provisional 99.64
PRK13272542 treA trehalase; Provisional 99.59
PRK13270549 treF trehalase; Provisional 99.54
PF01204512 Trehalase: Trehalase; InterPro: IPR001661 O-Glycos 99.46
PF04685365 DUF608: Protein of unknown function, DUF608; Inter 99.43
PF05592509 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; Int 99.33
COG3387612 SGA1 Glucoamylase and related glycosyl hydrolases 99.32
PF03200801 Glyco_hydro_63: Mannosyl oligosaccharide glucosida 99.17
TIGR01535648 glucan_glucosid glucan 1,4-alpha-glucosidase. Gluc 99.16
COG34591056 Cellobiose phosphorylase [Carbohydrate transport a 99.07
PF00723448 Glyco_hydro_15: Glycosyl hydrolases family 15; Int 98.65
COG1626558 TreA Neutral trehalase [Carbohydrate transport and 98.08
KOG0602600 consensus Neutral trehalase [Carbohydrate transpor 97.8
COG4354721 Predicted bile acid beta-glucosidase [Carbohydrate 97.8
KOG2161849 consensus Glucosidase I [Carbohydrate transport an 97.57
PF06824424 DUF1237: Protein of unknown function (DUF1237); In 97.0
KOG2119879 consensus Predicted bile acid beta-glucosidase [Ca 96.84
COG3538434 Uncharacterized conserved protein [Function unknow 91.92
cd02892634 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; 87.78
>PLN02973 beta-fructofuranosidase Back     alignment and domain information 
Probab=100.00  E-value=7.3e-167  Score=1323.04  Aligned_cols=539  Identities=83%  Similarity=1.370  Sum_probs=520.3

Q ss_pred             CCcccccccCcccchhhccCCcccccchHhhhccccchhhhhhccCCcccccccccchhhhhccccccccccccCCCCCC
Q 048475            2 DTLCTVAECNECDFSKLSEKPRSLNMDRERQRSFDERSLSELSIGFSPRVMTRSADNANANANANANFSRLVIDHNPDAP   81 (575)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (575)
                      +++++++|+|++||+||++|||++||  |||||||||||+|++....    .+          +..++++. +++ ++.+
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~----------~~~~~~~~-~~~-~~~~   81 (571)
T PLN02973         20 DSLSTLDDIDDIDFAKLLEKPRPLNI--DRLRSLDERSLTELTGSPQ----LR----------NADNASRA-PDH-ADYV   81 (571)
T ss_pred             cccccccccchhhHHHHhcCCcccch--hhccccchhhhhhcCcccc----cC----------Cccccccc-ccc-hhhc
Confidence            67899999999999999999999999  9999999999999965321    11          12344555 777 9999


Q ss_pred             CCC--CCCCCCCCCCCCCCCCCCchHHHHHHHHHHhhccccCCcceeeecCCCCccccCCCCCcccchHHHHHHHhcCCC
Q 048475           82 FSP--GRRSGFNTPRSLIGYEPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGE  159 (575)
Q Consensus        82 ~~~--~~~~~~~~~~~~~~~~~~~~~~~a~e~L~~s~v~~~~~pvGtlAa~d~~~~~~nY~~vFgRD~vISaL~~L~~g~  159 (575)
                      +||  |+|||++||++..++++|+++++|||+|++|+|+|||+|||||||.|++.+++||++||+||++||+|++|++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aw~~l~~s~v~~~g~pvgtvAa~d~~~~~lNY~qVFiRDfVpsaLafLl~Ge  161 (571)
T PLN02973         82 ISPSFGRRSGFNTPRSQPGFESHPMVGEAWDALRRSMVYFRGQPVGTIAAVDNSEEKLNYDQVFVRDFVPSALAFLMNGE  161 (571)
T ss_pred             cCCCcCccccCCCCcccccCCCCcHHHHHHHHHHhheEEECCeeeeeeeccCCccccccCcchhhhccHHHHHHHHHCCC
Confidence            999  999999999998899999999999999999999999999999999999878999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHh
Q 048475          160 PEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKST  239 (575)
Q Consensus       160 peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~T  239 (575)
                      +||||+||..+++||++|+++|+||+++|+||+||||.|+|+++++.+++|||+++||||+||||++||||++++|.+.|
T Consensus       162 ~eIVrnFl~~TL~lq~~ektld~~q~g~G~mPaSfkv~~~p~~~~e~l~aDfG~~aIGRV~pVDS~LWWIIllraY~k~T  241 (571)
T PLN02973        162 PDIVKNFLLKTLRLQSWEKKIDRFQLGEGVMPASFKVFHDPVRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKST  241 (571)
T ss_pred             HHHHHHHHHHHHhhhhhHHHHHhcccCCCCcCceeeecccccCccccccccccccccccccccchhhHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999998788899999999999999999999999999999999999


Q ss_pred             CCccccCcHHHHHHHHHHHhcccCCCcccCCCccccCCccccCCch----------HHHHHHHHHHHHhhccCCCChHHH
Q 048475          240 GDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRM----------ALFFMALRCALVLLKQDDEGKEFV  309 (575)
Q Consensus       240 GD~~fl~~p~vq~al~wi~~~~~~dGf~~yptll~~Dg~~miDrrm----------aL~Y~ALr~aa~L~~~~g~~~~~a  309 (575)
                      ||.+|++.|+||+||+||+++|+.++|++||+|+|+||+|||||||          ||||+||||+.+|+.+.++.++++
T Consensus       242 gD~s~~e~pevQrgi~lil~lcL~~~Fd~~ptLlVpDgs~miDrrMgv~G~pLeiQaLfy~ALR~a~~~L~~~~~~~~~i  321 (571)
T PLN02973        242 GDSSLADMPECQKGIRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALLLLKHDGEGKEMV  321 (571)
T ss_pred             cchhhhhcHHHHHHHHHHHHHhcccccCCCceEeccCCccccccccccCCccHHHHHHHHHHHHHHHHhcCccchhHHHH
Confidence            9999999999999999999999999999999999999999999999          999999999999999987778999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccCCCCCCcccccccccCCCceeeecccCCccccccc
Q 048475          310 ERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWF  389 (575)
Q Consensus       310 ~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~R~f  389 (575)
                      ++|.+|+.+|++||+++||++.+++|+|||||||||+++|+|||||+|||||+||+||||++|||++||++|++||||||
T Consensus       322 ~~i~~rl~~L~~hir~~ywld~~~ln~iyRykteey~~~a~NkfNi~p~sip~wl~dwlp~~gGY~igNv~Pa~~DfRff  401 (571)
T PLN02973        322 EQIVKRLHALSYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPPHGGFFIGNVSPARMDFRWF  401 (571)
T ss_pred             HHHHhhHHHHHHHHHHHHhcCHHHhhhHhhcchhhcchhhhhhccCCccccchhhhhhccCCCceeeeecccccCCcchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccchhHHHhcCCCCHHHHHHHHHHHHHhHHhhhccCCcccccCCccCCCceeeeCCCCCCCCcccccCCCCcccccCCCC
Q 048475          390 ALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSF  469 (575)
Q Consensus       390 ~lGN~lALlsGla~~eqa~~I~~~i~~~w~~l~~~~plr~~~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvWP~l~a~~gF  469 (575)
                      ++||+||+++||++++|+++||++|++||++|+++||||+||||+++++||++||+||||.||||||||+||+++     
T Consensus       402 slGNllAILs~Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkicyPaie~~EWri~tG~dpKN~PWSYHNGGsWP~Ll-----  476 (571)
T PLN02973        402 ALGNCIAILSSLATPEQSTAIMDLIESRWEELVGEMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLL-----  476 (571)
T ss_pred             hhhhHHHHHhccCCHHHHHHHHHHHHHHHHHHHhcCCcceeccCcCCccceehhccCCCCCccceecCCCccHHH-----
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999     


Q ss_pred             CccchhHHHhhhhhhHHHHHhcCchHH-HHHHHHHHhhhcCCCCCCccCCCCCCccCccCCccccchHHHHHHHHHhccC
Q 048475          470 WPADQNLQLLLHTIDVSLSYKFKIPFI-KRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLED  548 (575)
Q Consensus       470 W~~~~~~~~ll~~~~~~al~k~G~~~~-~~al~~~~~~l~~~~~pEyfdG~tG~p~G~~a~~~QaWSaA~~L~a~~~L~~  548 (575)
                      |        ++    ++||+|+|++++ +++++.++.++.+++|||||||+||+|+|+|||++|||||||||+|+++|+|
T Consensus       477 w--------~~----~aA~iK~gr~~lA~ral~~ae~rl~~d~WpEyyDGktGr~iGkqar~yQTWSiAG~LlA~~~L~~  544 (571)
T PLN02973        477 W--------LL----TAACIKTGRPQIARRAIEVAEARLHKDHWPEYYDGKVGRYVGKQSRKNQTWSVAGYLVAKMMLED  544 (571)
T ss_pred             H--------HH----HHHHHHcCCHHHHHHHHHHHHHHhhhcCChhhcCCCCCcCcceeccccCchHHHHHHHHHHHhhC
Confidence            6        66    999999999999 9999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccccccccccccchhhcccCCCC
Q 048475          549 PSHLGMISLEEDKQLKPLLRRSHSWTF  575 (575)
Q Consensus       549 p~~~~~~~~~~~~~~~~~~~~~~~~~~  575 (575)
                      |++++||+++||+++||+++||+||||
T Consensus       545 P~~~~~~~~~e~~~~~~~~~~~~~~~~  571 (571)
T PLN02973        545 PSHVGMVCLEEDKQMKPVMRRSNSWTC  571 (571)
T ss_pred             hhhcccccccccccccchhccccccCC
Confidence            999999999999999999999999997

>PLN03005 beta-fructofuranosidase Back     alignment and domain information
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases Back     alignment and domain information
>PLN02703 beta-fructofuranosidase Back     alignment and domain information
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT Back     alignment and domain information
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information
>PRK10137 alpha-glucosidase; Provisional Back     alignment and domain information
>TIGR01577 oligosac_amyl oligosaccharide amylase Back     alignment and domain information
>PLN02567 alpha,alpha-trehalase Back     alignment and domain information
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13271 treA trehalase; Provisional Back     alignment and domain information
>PRK13272 treA trehalase; Provisional Back     alignment and domain information
>PRK13270 treF trehalase; Provisional Back     alignment and domain information
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide [] Back     alignment and domain information
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes Back     alignment and domain information
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase Back     alignment and domain information
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function Back     alignment and domain information
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3538 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query575
1v7w_A807 Chitobiose phosphorylase; beta-sandwich, (alpha/al 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
3rrs_A822 Cellobiose phosphorylase; GH94, alpha barrel, disa 2e-05
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Length = 807 Back     alignment and structure
 Score = 59.4 bits (143), Expect = 2e-09
 Identities = 56/336 (16%), Positives = 100/336 (29%), Gaps = 60/336 (17%)

Query: 145 RDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNT 204
           RD    A++      PE+ +  I+  LR Q            +   P    V        
Sbjct: 349 RDTAQDAISVPH-ANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVAPSKSPTV 407

Query: 205 ETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE--LPECQKGMRLILSLCL 262
               +D  +    +    D   W I  +  Y   TG++S  +  +P    G   +     
Sbjct: 408 VPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMK 467

Query: 263 SE--------GFDTFPTLLCADGCCMIDRRMA-------LFFMALRCALVLLKQDDEGKE 307
           +         G       L AD    ++           L F AL+  + L K   +  +
Sbjct: 468 AALDFSAEYVGQTGICKGLRADWNDCLNLGGGESSMVSFLHFWALQEFIDLAKFLGK-DQ 526

Query: 308 FVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDF 367
            V    +    +     ++ W D        R  T+                        
Sbjct: 527 DVNTYTEMAANVREACETHLWDDEGGW--YIRGLTKN----------------------- 561

Query: 368 MPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPI 427
                G  IG  +  + + R     N +A+LS LA++E+    MD ++   E L     +
Sbjct: 562 -----GDKIG--TAQQQEGRVHLESNTLAVLSGLASQERGEQAMDAVD---EHLFSPYGL 611

Query: 428 KVCYPAIESHDWRI--ITGCDPKNTRWSYHNGGSWP 461
            +  P+  + +  I  +T            NG  + 
Sbjct: 612 HLNAPSFSTPNDDIGFVTRVYQ----GVKENGAIFS 643
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A* Length = 822 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query575
3c68_A761 Uncharacterized protein YGJK; GH63, processing alp 99.97
2z07_A420 Putative uncharacterized protein TTHA0978; unchara 99.97
1v7w_A807 Chitobiose phosphorylase; beta-sandwich, (alpha/al 99.96
2jg0_A535 Periplasmic trehalase; family 37, hydrolase, inhib 99.95
3qde_A811 Cellobiose phosphorylase; cellulase, phosphate, tr 99.95
3rrs_A822 Cellobiose phosphorylase; GH94, alpha barrel, disa 99.95
2okx_A956 Rhamnosidase B; alpha barrel, glycoside hydrolase 99.86
3cih_A739 Putative alpha-rhamnosidase; structural genomics, 99.8
1lf6_A684 Glucoamylase; (alpha/alpha) barrel, 6 alpha-helica 99.79
1ulv_A 1020 Glucodextranase; GH family 15, (alpha-alpha)6-barr 99.78
2fba_A492 Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hy 99.27
2vn4_A 599 Glucoamylase; hydrolase, carbohydrate binding, gly 99.23
1gai_A472 Glucoamylase-471; hydrolase, glycosidase, polysacc 99.22
2p0v_A489 Hypothetical protein BT3781; alpha-beta protein, s 98.96
3qry_B426 Putative uncharacterized protein; alpha-alpha six 98.59
3p2c_A463 Putative glycosyl hydrolase; structural genomics, 98.59
3qt9_A427 Putative uncharacterized protein CPE0426; alpha-al 98.51
2rdy_A803 BH0842 protein; PSI-II, structural genomics, prote 90.95
2eab_A899 Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifi 90.29
1h54_A754 Maltose phosphorylase; hydrolase, maltose metaboli 85.89
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Back     alignment and structure
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Back     alignment and structure
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A* Back     alignment and structure
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum} Back     alignment and structure
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A* Back     alignment and structure
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP} Back     alignment and structure
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A* Back     alignment and structure
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A* Back     alignment and structure
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A Back     alignment and structure
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A* Back     alignment and structure
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A* Back     alignment and structure
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8 Back     alignment and structure
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A* Back     alignment and structure
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A* Back     alignment and structure
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A Back     alignment and structure
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125} Back     alignment and structure
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A* Back     alignment and structure
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 575
d1v7wa1531 a.102.1.4 (A:271-801) Chitobiose phosphorylase Chb 1e-09
>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} Length = 531 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Glycosyltransferase family 36 C-terminal domain
domain: Chitobiose phosphorylase ChbP
species: Vibrio proteolyticus [TaxId: 671]

 Score = 58.4 bits (140), Expect = 1e-09
 Identities = 50/325 (15%), Positives = 87/325 (26%), Gaps = 28/325 (8%)

Query: 145 RDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNT 204
           RD    A++      PE+ +  I+  LR Q            +   P    V        
Sbjct: 79  RDTAQDAISVPH-ANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVAPSKSPTV 137

Query: 205 ETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSS-LAELPECQKGMRLILSLCLS 263
               +D  +    +    D   W I  +  Y   TG++S   ++     G    +   + 
Sbjct: 138 VPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMK 197

Query: 264 EGFDTFPTLLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHM 323
              D     +   G C   R      +           +  G E          AL   +
Sbjct: 198 AALDFSAEYVGQTGICKGLRADWNDCL-----------NLGGGESSMVSFLHFWALQEFI 246

Query: 324 RSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAK 383
               +L   Q  + Y                                  G  IG      
Sbjct: 247 DLAKFLGKDQDVNTYTEMAANVREACETHLWDDEGGWYIRGLTKN----GDKIGTAQQ-- 300

Query: 384 MDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDW--RI 441
            + R     N +A+LS LA++E+    MD   +  E L     + +  P+  + +     
Sbjct: 301 QEGRVHLESNTLAVLSGLASQERGEQAMD---AVDEHLFSPYGLHLNAPSFSTPNDDIGF 357

Query: 442 ITGCDPKNTRWSYHNGGSWPVESAM 466
           +T            NG  +   +  
Sbjct: 358 VTRVYQ----GVKENGAIFSHPNPW 378

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query575
d1lf6a1397 Bacterial glucoamylase, C-terminal domain {Thermoa 99.9
d1v7wa1531 Chitobiose phosphorylase ChbP {Vibrio proteolyticu 99.89
d2jg0a1511 Periplasmic trehalase TreA {Escherichia coli [TaxI 99.83
d1ulva1413 Glucodextranase, domain A {Arthrobacter globiformi 99.78
d2fbaa1492 Glucoamylase {Yeast (Saccharomycopsis fibuligera) 99.04
d1gaia_472 Glucoamylase {Aspergillus awamori, variant x100 [T 98.87
d2p0va1443 Hypothetical protein BT3781 {Bacteroides thetaiota 97.41
d2nvpa1426 Hypothetical protein CPF0428 {Clostridium perfring 96.91
d1h54a1485 Lactobacillus maltose phosphorylase, central domai 92.73
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 89.85
>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Bacterial glucoamylase C-terminal domain-like
domain: Bacterial glucoamylase, C-terminal domain
species: Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]

Probab=99.90  E-value=7.9e-23  Score=208.91  Aligned_cols=361  Identities=12%  Similarity=0.060  Sum_probs=224.1

Q ss_pred             CCchHHHHHHHHHHhhccccCC-cceeeecCCCCc-------cccCCCCCcccchHHHHHHHhcCCChHHHHHHHHHHHh
Q 048475          101 PHPMVGEAWDALRRSLVYFRGK-PVGTIAALDSSE-------EELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLR  172 (575)
Q Consensus       101 ~~~~~~~a~e~L~~s~v~~~~~-pvGtlAa~d~~~-------~~~nY~~vFgRD~vISaL~~L~~g~peiaR~~L~~ll~  172 (575)
                      ...+...+.-.|+-..   +.+ +-++|||..++.       ..-.|.-+|+||+++++.+++..|++++++.+|.++++
T Consensus         7 ~~~~~~~s~~~lk~~~---~~~~~GaiiAsptt~~~e~~~~~~~~~Y~y~W~RDaa~~~~al~~~G~~~~a~~~l~~l~~   83 (397)
T d1lf6a1           7 ANSLYYNSMMILKASE---DKTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDYLAK   83 (397)
T ss_dssp             CCHHHHHHHHHHHTTB---CSSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcc---CCCCCceEEEeCCCCcccccCCCCCCCCeeEcHhhHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            3445555555555222   223 356677765431       12359999999999999999999999999999999998


Q ss_pred             hchhhhhccccccCCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccCcHHHHH
Q 048475          173 LQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQK  252 (575)
Q Consensus       173 lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~~p~vq~  252 (575)
                      .|.          ..|.+|+.+-+        + +.+.+     ++ ..+|++.|++++++.|.+.+..     ++.|++
T Consensus        84 ~~~----------~~G~~~~~~~~--------~-G~~~~-----~~-~q~D~~g~~i~a~~~~~~~~~~-----~~~i~~  133 (397)
T d1lf6a1          84 VVK----------DNGMIPQNTWI--------S-GKPYW-----TG-IQLDEQADPIILSYRLKRYDLY-----DSLVKP  133 (397)
T ss_dssp             HHH----------HHSSCCSCBCT--------T-SCBCC-----CC-CCHHHHHHHHHHHHHTTCGGGT-----TTTHHH
T ss_pred             Hhc----------ccCCCCCCCCc--------C-CCccc-----cC-CCCchHHHHHHHHHHHHhcchh-----HHHHHH
Confidence            774          45777876522        1 11223     22 2589999999999999876543     566799


Q ss_pred             HHHHHHhcccCCCcccCCCccccCCccccCCchHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchh
Q 048475          253 GMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLK  332 (575)
Q Consensus       253 al~wi~~~~~~dGf~~yptll~~Dg~~miDrrmaL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~  332 (575)
                      +++++...-...+++--.   -..|.....  .+.+|.||++++.++...+ ..+.+.++.+.+..++..|.++||.+..
T Consensus       134 ~~~~l~~~~~~~~~~lWE---e~~g~~~~t--~~~~~~aL~~~a~la~~~g-~~~~a~~~~~~A~~i~~~i~~~~~~~~~  207 (397)
T d1lf6a1         134 LADFIIKIGPKTGQERWE---EIGGYSPAT--MAAEVAGLTCAAYIAEQNK-DYESAQKYQEKADNWQKLIDNLTYTENG  207 (397)
T ss_dssp             HHHHHHHHCSSBSSCTTS---SCCBBCHHH--HHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHHHEESSC
T ss_pred             HHHHHHHhCCCCcccccc---ccCCcccch--hHHHHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHHHHHhccCccc
Confidence            999998765433332100   001111111  1889999999999999986 4456777888888899999999998765


Q ss_pred             hhhhhhhccccchhhhhhccccCCCCCCcccccccccCCCceeeecccCC---cccccccccchhHHHhcCCCCH--HHH
Q 048475          333 QLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPA---KMDFRWFALGNCIAILSSLATE--EQS  407 (575)
Q Consensus       333 ~l~~iyr~~teey~~~a~nkfni~pd~ip~w~~~w~p~~ggYl~gnv~P~---~~d~R~f~lGN~lALlsGla~~--eqa  407 (575)
                      ....-      .|.  ....-+-.++            . +....-....   ..+...++ +.++.+++|+.++  ++.
T Consensus       208 ~~~~~------~~~--~r~~~~~~~~------------~-~~~~~~~~~~~~~~~~~~lDa-sll~~~~~g~~~~~d~~~  265 (397)
T d1lf6a1         208 PLGNG------QYY--IRIAGLSDPD------------A-DFMINIANGGGVYDQKEIVDP-SFLELVRLGVKSADDPKI  265 (397)
T ss_dssp             SSTTS------CEE--CSCBSSSCTT------------S-CCEEEETTTTEEEEGGGCCCG-GGGHHHHTTSSCTTCHHH
T ss_pred             ccccc------cce--eccccccCcc------------c-cccccccccccccccCCCcCH-HHhhccccCCCCCCCHHH
Confidence            42211      000  0000000000            0 0111111111   01111232 3444567777665  444


Q ss_pred             HHHHHHHHHhHHhhhccCCcccccCCccCCCceeeeCCCCCCCCcccccCCCCcccccCCCCCccchhHHHhhhhhhHHH
Q 048475          408 NAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSL  487 (575)
Q Consensus       408 ~~I~~~i~~~w~~l~~~~plr~~~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvWP~l~a~~gFW~~~~~~~~ll~~~~~~a  487 (575)
                      ...++.++   ++|..+.|+....+.-...   .+......+.+..+|+|+.||..++    |         +    +.+
T Consensus       266 ~~tl~~i~---~~l~~~~g~~~~~~RY~~D---~y~~~~~~~~~~~~~~g~pW~i~T~----~---------~----a~~  322 (397)
T d1lf6a1         266 LNTLKVVD---STIKVDTPKGPSWYRYNHD---GYGEPSKTELYHGAGKGRLWPLLTG----E---------R----GMY  322 (397)
T ss_dssp             HHHHHHHH---HHSEEEETTEEEECSSTTC---CCSCSBTTBCCSSSSCCCBBHHHHH----H---------H----HHH
T ss_pred             HHHHHHHH---HHhccCCCccccccccccc---cccccCCcCCccCCcCCchHHHHHH----H---------H----HHH
Confidence            44455554   5777777776655432111   1223344566778899998988772    4         2    677


Q ss_pred             HHhcCchHHHHHHHHHHhhh-cCCCCCCccCCCCCCccCccCCccccchHHHHHHHHHhccC
Q 048475          488 SYKFKIPFIKRAIELAESRL-LKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLED  548 (575)
Q Consensus       488 l~k~G~~~~~~al~~~~~~l-~~~~~pEyfdG~tG~p~G~~a~~~QaWSaA~~L~a~~~L~~  548 (575)
                      +++.|+. .+++++..+.+. ..+.+||.||+.||+|.|.  +.+||||.|+||++-..|++
T Consensus       323 ~~~~g~~-A~~~l~~~~~~~~~~G~l~E~~d~~tG~~~g~--a~plaWS~A~~i~~~~~l~~  381 (397)
T d1lf6a1         323 EIAAGKD-ATPYVKAMEKFANEGGIISEQVWEDTGLPTDS--ASPLNWAHAEYVILFASNIE  381 (397)
T ss_dssp             HHHTTCC-CHHHHHHHHHHSCTTSCCCSCBCTTTCCBCSS--CSSCHHHHHHHHHHHHHHHH
T ss_pred             HHHccHH-HHHHHHHHHHhcCCCCccceeecCCCCCcCCC--CccHHHHHHHHHHHHHHHhc
Confidence            7888863 245555555544 4567999999999999983  24899999999888777753
>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} Back     information, alignment and structure
>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d2fbaa1 a.102.1.1 (A:1-492) Glucoamylase {Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]} Back     information, alignment and structure
>d1gaia_ a.102.1.1 (A:) Glucoamylase {Aspergillus awamori, variant x100 [TaxId: 105351]} Back     information, alignment and structure
>d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d2nvpa1 a.102.1.8 (A:2-427) Hypothetical protein CPF0428 {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d1h54a1 a.102.1.4 (A:269-753) Lactobacillus maltose phosphorylase, central domain {Lactobacillus brevis [TaxId: 1580]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure